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A novel method to estimate DOC concentrations from CDOM absorption coefficients in coastal waters

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Geophysical Research Letters
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A novel method to accurately retrieve DOC concentrations (±4%) from CDOM absorption coefficients, ag(λ), at λ = 275 and 295 nm is presented. By using these two wavelengths, the method exploits useful information about the ratio of ag(λ) to [DOC] contained in the 275–295 nm spectral slope coefficient, S275−295. This approach was developed using data (n = 222) collected on a seasonal basis in surface waters of the Northern Gulf of Mexico. The approach is demonstrated to accurately and consistently estimate [DOC] for all seasons and for a broad [DOC] range of 63–611 μM. Application to coastal waters of the Beaufort Sea (n = 33) demonstrated that similar performance can be expected in other river-influenced ocean margins after parameterization using local data. Applicability to other marine environments remains to be tested but such assessment can be pursued immediately where appropriate data have already been collected.
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A novel method to estimate DOC concentrations from CDOM
absorption coefficients in coastal waters
Cédric G. Fichot
1
and Ronald Benner
1
Received 10 November 2010; revised 17 December 2010; accepted 28 December 2010; published 12 February 2011.
[1] A novel method to accurately retrieve DOC concentra-
tions (±4%) from CDOM absorption coefficients, a
g
(l), at
l= 275 and 295 nm is presented. By using these two wave-
lengths, the method exploits useful information about the
ratio of a
g
(l) to [DOC] contained in the 275295 nm spectral
slope coefficient, S
275295
. This approach was developed
using data (n= 222) collected on a seasonal basis in surface
waters of the Northern Gulf of Mexico. The approach is dem-
onstrated to accurately and consistently estimate [DOC] for
all seasons and for a broad [DOC] range of 63611 mM.
Application to coastal waters of the Beaufort Sea (n= 33)
demonstrated that similar performance can be expected in
other riverinfluenced ocean margins after parameterization
using local data. Applicability to other marine environments
remains to be tested but such assessment can be pursued
immediately where appropriate data have already been col-
lected. Citation: Fichot, C. G., and R. Benner (2011), A novel
method to estimate DOC concentrations from CDOM absorption
coefficients in coastal waters, Geophys. Res. Lett.,38, L03610,
doi:10.1029/2010GL046152.
1. Introduction
[2] Conventional methods for the analysis of Dissolved
Organic Carbon (DOC) are restricted to measurements of
discrete samples and are limited to providing synoptic
coverage on relatively small spatial scales. The estimation
of DOC concentrations, [DOC], through measurement of the
optical properties of dissolved organic matter (DOM)
(absorption and fluorescence) therefore represents a com-
pelling alternative. Under optimal conditions and with proper
instrumentation, the optical properties of DOM can be rapidly
and continuously acquired in situ [Vodacek et al., 1997;
Hitchcock et al., 2004].
[3] The relationship between [DOC] and DOM absorption
(Chromophoric Dissolved Organic Matter, CDOM) has
been investigated in a variety of coastal systems [Ferrari
et al., 1996; Del Vecchio and Blough, 2004a; Guéguen
et al., 2005]. Although strong positive correlations have
been observed between CDOM absorption coefficients,
a
g
(l), and [DOC], the relationship varies among geograph-
ical regions and seasons [Blough and Del Vecchio, 2002].
For example, the ratio of a
g
(l) to [DOC] varies seasonally
by more than 25fold in the Middle Atlantic Bight alone
[Del Vecchio and Blough, 2004a]. Such variability in this
ratio sets a limit on our capability to predict [DOC] from
simple linear relationships between DOC and CDOM.
[4] The spectral characteristics of a
g
(l) are representative
of the types of chromophores present in DOM [Del Vecchio
and Blough, 2004b]. A single exponential fit (equation 1) is
typically used to describe the spectral dependency of a
g
(l):
agðÞ¼ag0
ðÞeS0
ðÞ ð1Þ
where l
0
<land Sis the spectral slope coefficient in the
l
0
to lnm spectral range. Several studies have related the
spectral characteristics of DOM absorption to the chemical
and structural nature of DOM such as molecular weight and
aromaticity [Chin et al., 1994; Helms et al., 2008]. Other
studies utilized molar absorptivity or carbonspecific UV
absorbance as indicators of the molecular weight and aro-
matic content of organic matter isolates [Chin et al., 1994;
Weishaar et al., 2003]. A linkage between the spectral
characteristics of a
g
(l) and the ratio a
g
(l)/[DOC] is there-
fore possible. If such a connection exists for DOM in the
marine environment it could be exploited to improve pre-
dictions of [DOC] from measurements of a
g
(l).
[5] In this study, we explore the relationship between
Sand the ratio a
g
(l)/[DOC] in surface waters of the
Northern Gulf of Mexico (NGoM), with the intent of testing
this hypothesis. Following recommendations by Helms et al.
[2008] on the use of Sin the 275295 nm spectral range,
a strong relationship between S
275295
and a
g
(l)/[DOC] was
discovered. This connection is exploited in a method to
accurately estimate [DOC] from simple in situ measure-
ments of a
g
(275) and a
g
(295) in coastal areas. Its applica-
bility in other marine systems is discussed.
2. Sampling and Methods
[6] Surface water from the NGoM was collected and fil-
tered for DOC analysis and CDOM absorbance measure-
ments. A total of 222 stations (n= 222) were sampled during
five research cruises (January, April, July, October/November
2009 and March 2010) as part of the GULFCARBON project.
About 50 stations were sampled per cruise (Figure 1a) with
the exception of January 2009 when 24 stations were sam-
pled. Representing a salinity range of 037 psu, these
samples include most water types typically encountered in
riverdominated ocean margins. DOC analysis was done by
High Temperature Combustion (HTC) and CDOM absorbance,
A(l), was measured using a dualbeam spectrophotometer.
Absorbances were converted to absorption coefficients, a
g
(l),
and spectral slope coefficients, S, were calculated using linear
fits of loglinearized a
g
(l). The carbonspecific absorption
coefficients of DOM were calculated as the ratio of a
g
(l)
to DOC concentration and are denoted here as a*
g
(l), with
units of m
1
mM
1
. The value of a*
g
(l)atl= 355 nm was
calculated for consistency with previous studies [Vodacek
1
Marine Science Program, University of South Carolina, Columbia,
South Carolina, USA.
Copyright 2011 by the American Geophysical Union.
00948276/11/2010GL046152
GEOPHYSICAL RESEARCH LETTERS, VOL. 38, L03610, doi:10.1029/2010GL046152, 2011
L03610 1of5
et al., 1997; Del Vecchio and Blough, 2004a]. Detailed
sampling and methods are provided in the auxiliary material.
1
[7] Surface water from the Beaufort Sea was sampled in
August 2009 as part of the MALINA project. A total of
33 stations (n= 33) were sampled across a salinity gradient
of 0 to 30 psu and [DOC] and absorbance were measured as
described above.
3. Dynamics of DOC and CDOM in the Northern
Gulf of Mexico
[8] The measured range of DOC concentrations, ([DOC]:
63611 mM) spanned an order of magnitude over the
salinity range of 0 to 37 psu. The strong relationship
between salinity and [DOC] (r
2
= 0.83) indicates that DOM
dynamics in surface waters were, to a first degree, domi-
Figure 1. (a) Station locations in the Northern Gulf of
Mexico. (b) CDOM absorption coefficient spectra, a
g
(l),
and corresponding spectral slope coefficient, S
275295
,for
three contrasting water samples. The yaxis for a
g
(l)isa
log scale. S
275295
is typically low in river water and in-
creases in coastal and oligotrophic waters. A modeled,
downward plane irradiance spectrum just above the sea sur-
face, E
d
(0
+
,l), is overlaid and illustrates the absence of
photons at wavelengths (l) < 295 nm. E
d
(0
+
,l) was modeled
for June 21st, 12:00 p.m., at latitude 28°N, with 300 DU of
ozone, and a clear sky. These conditions correspond to the
maximal incident irradiance expected in the Northern Gulf
of Mexico.
Figure 2. Relationships between different DOM properties
in the Northern Gulf of Mexico: (a) [DOC] vs. salinity;
(b) a
g
(355) vs. [DOC]; (c) a*
g
(355) = a
g
(355)/[DOC] vs.
S
275295
. In Figures 2a and 2b, the inset plots present linear
regressions for the entire range of the data whereas the main
plots magnify the 50300 mM [DOC] range. In Figure 2c, the
inset plot shows the lack of relationship between S
350400
and a*
g
(355).
1
Auxiliary materials are available in the HTML. doi:10.1029/
2010GL046152.
FICHOT AND BENNER: DOC ESTIMATES FROM CDOM ABSORPTION COEFFICIENTS L03610L03610
2of5
nated by terrigenous inputs (inset of Figure 2a). Within this
general view, however, a significant seasonality and devia-
tion from linear mixing at salinity extremes was apparent
(Figure 2a). A poor correlation observed between [DOC]
and salinity at salinities less than 20 psu (r
2
= 0.18) indicated
the presence of multiple riverine sources with varying
DOM properties. This observation is in agreement with
earlier studies demonstrating varying mixing behavior of
DOC as it transits from estuaries to the Gulf of Mexico [Guo
et al., 1998].
[9] The NGoM is a riverdominated system in terms of
DOM optical properties [Chen and Gardner, 2004; Conmy
et al., 2004; DSa and DiMarco, 2009]. A strong, linear
relationship (r
2
= 0.90) was observed in the present study
between [DOC] and the CDOM absorption coefficient,
a
g
(355) (inset of Figure 2b). However, this strong relation-
ship is misleading for the purpose of retrieving [DOC] from
a
g
(355). The ratio a
g
(355)/[DOC] = a*
g
(355), varies by a
factor of 55, from a minimum value of 5.3*10
4
m
1
mM
1
in the most oligotrophic sample to a value of 2.9*10
2
m
1
mM
1
in freshwater. The trend, range and values of a*
g
(355)
observed in this study are in general agreement with those
observed by Del Vecchio and Blough [2004a] in the Middle
Atlantic Bight. Some of this variability can be attributed to the
conservative mixing of river water and seawater along the
salinity gradient and can be accounted for in a linear rela-
tionship of the form [DOC] = a+ba
g
(355), where aand b
are regression coefficients. However, a magnified view of
the relationship between [DOC] and a
g
(355) (Figure 2b)
also shows a strong seasonality and some nonlinearity
which can result from: 1) the presence of multiple riverine
sources with different a*
g
(355); 2) the decoupling between
the autochtonous sources and sinks of DOC with those of
CDOM; and 3) photobleaching, known to decrease a*
g
(355)
[Del Vecchio and Blough, 2004a]. This variability cannot be
constrained in the simple linear model and although sea-
sonal linear models can be derived, their implementation is
always difficult.
[10] Numerous studies have investigated the dynamics of
the spectral slope coefficient in aquatic environments and
have concluded that it is of limited utility as a biogeocheo-
mical indicator [Blough and Del Vecchio, 2002]. However,
the spectral range used among investigators has been incon-
sistent, generally broad (e.g., 290700 nm) and restricted to
the UVA and visible domains. Helms et al. [2008] recently
suggested the use of S
275295
(UVB domain, narrow
range) as an indicator of photochemical alterations and
DOM molecular weight and source in the marine environ-
ment. In light of their results, a remarkable finding of the
present study is a strong relationship between S
275295
and
a*
g
(355) (Figure 2c), which is best approximated by an
exponential equation of the form: a*
g
(355) = e
(abS
275295
)
+
e
(gdS
275295
)
, where a,b,gand dare regression coeffi-
cients. This relationship is remarkable because a strong
connection does not exist between a*
g
(355) and other spec-
tral slope coefficients such as S
300350
,S
300400
or S
350400
in
this data set (inset of Figure 2c), thereby highlighting the
unique potential of the 275295 nm spectral range to retain
information about DOM composition and the ratio of a
g
(l)
to [DOC]. The strong link between S
275295
and a*
g
(355) is
indicative that the dynamics of these two DOM properties
are regulated by the same processes. Although gaining a full
understanding of the dynamics responsible for this rela-
tionship is beyond the scope of this manuscript, it can be
inferred from a few recent studies that the processes
responsible for the variabilities in S
275295
and a*
g
(355) are
of the same nature [Del Vecchio and Blough, 2004a; Helms
et al., 2008; OrtegaRetuerta et al., 2009].
[11] A unique and important aspect of S
275295
not men-
tioned by Helms et al. [2008] is the unique position of the
275295 nm spectral region on the outside edge of the
natural solar spectrum (Figure 1b). Even under optimal
conditions, very few photons of l< 295 nm are present in
the natural environment. According to the work of Del
Vecchio and Blough [2002] on the photobleaching of
a
g
(l) using monochromatic irradiations, the decrease in a
g
(l)
upon absorption of photons of wavelength l
ex
is maximum
at or near l=l
ex
and decreases exponentially towards other
wavelengths. It is therefore expected that any natural photon
absorbed would always lead to a greater change in a
g
(295)
than in a
g
(275), and consequently, to an increase in S
275295
.
In contrast, other spectral regions used for the determination
of Stend to overlap with the photochemicallyactive part of
the natural solar spectrum (typically 300400 nm). A well
behaved response of Sto photobleaching is therefore
unlikely for spectral regions other than 275295 nm. This
phenomenon can contribute to the erratic behavior of S
typically observed in the marine environment.
[12] An important implication of the relationship between
S
275295
and a*
g
(l) in this system is the novel capability to
constrain the variability in the ratio a
g
(l)/[DOC] using
information contained in the spectral shape of a
g
(l). Because
a
g
(l)/[DOC] can vary by a large factor, exploiting this
information can considerably improve the accuracy of [DOC]
retrieved from a
g
(l).
4. Estimating DOC from CDOM
[13] DOC concentrations can be retrieved from the com-
bination of a
g
(l) and a nonlinear fit of a*
g
(l) versus S
275295
.
However, we found through extensive testing that the most
accurate [DOC] were obtained by performing multiple linear
regressions (MLR) of loglinearized [DOC] against log
linearized a
g
(275) and a
g
(295), as described in equation (2):
ln DOC½¼þln ag275ðÞ

þln ag295ðÞ

ð2Þ
where a,band gare regression coefficients.
[14] This method exploits all the useful information
contained in S
275295
while being simpler, more direct and
accurate. The best wavelengths for prediction of [DOC]
were l= 275, 295 nm. The use of additional variables in the
MLR (e.g., a
g
(l)atl275, 295 nm, salinity, chlorophylla
fluorescence) did not improve the predictive capability of
the model. A MLR against ln [a
g
(275)] and ln [a
g
(295)]
therefore represents an optimal model. In order to relieve the
constraint of using a single MLR for a broad range of
[DOC] (63611 mM), the data were separated into two
subsets and a specific MLR was done on each subset. The
data were divided based on the cutoff value a
g
(275) = 3.5 m
1
,
which corresponds to the median value in these data. The
regression coefficients are provided in Table 1 and the per-
formance of the model is evaluated in Figure 3.
[15] The performance of the model (Figure 3b) was
compared to that of a single regression of ln [DOC] versus
ln [a
g
(355)] model (Figure 3a). A large seasonal bias and
FICHOT AND BENNER: DOC ESTIMATES FROM CDOM ABSORPTION COEFFICIENTS L03610L03610
3of5
poor accuracy at low and high DOC concentrations re-
sulted from the use of the single regression, even after log
linearization of [DOC] and a
g
(355). An even larger bias and
lower accuracy was observed if these values were not log
linearized before regression. The new approach demon-
strates that the use of two carefully chosen wavelengths and
their use in MLR can considerably improve the accuracy of
estimated DOC concentrations. Overall, [DOC] estimated
using this approach were within ±4.2% of the measured
[DOC]. For comparison, the percent error associated with
replicates of [DOC] measurements was typically ±1%. A
sensitivity analysis of the model also revealed that about half
of the ±4.2% error could be attributed to errors in the
reproducibility of the absorbance measurements. The dis-
tribution of points around the 1to1 line indicated that the
percent error associated with the [DOC] retrieved using this
approach was consistent over the entire [DOC] range
(Figure 3b). The error associated with the estimate is typi-
cally ±2.4 mM for a measured [DOC] value of 60 mM, and
±12 mM for a measured [DOC] value of 300 mM.
5. Applicability of the Approach
[16] The results presented in the previous section are valid
in the NGoM, for which the model was parameterized.
Application of these parameters to other marine systems can
therefore lead to unpredictable results. In order to test the
applicability of the approach to a different coastal system,
we applied it to independent data (n= 33) acquired in
August 2009 in the Beaufort Sea, in a region influenced
by the Mackenzie river outflow. Our results indicate that
applying the approach to this region using the NGoM
parameters results in decreased accuracy (±18% of mea-
sured [DOC]) and biases in the derived [DOC]. However,
excellent accuracy (±4.7%) and a consistent percent error
over the full range of measured [DOC] (66458 mM) is
obtained after the model was reparameterized using local
data (Figure 3c and Figure 4 in the Auxiliary Material). The
regression coefficients derived for the Beaufort Sea are
given in Table 1.
[17] Although the approach may be applied to other coastal
environments, differences in DOM sources and regulatory
processes make the reparameterization of the model using
local data necessary to achieve high performance. Suitable
data have already been collected in other coastal systems
such as the Middle Atlantic Bight [Del Vecchio and Blough,
2004a; Mannino et al., 2008] and are therefore readily
available for parameterizing the model. For other marine
systems where both the range in DOM properties and the
Table 1. Parameters a,band gDerived From the Multiple Linear
Regressions of ln [DOC] Against ln [a
g
(275)] and ln [a
g
(295)] for
the Northern Gulf of Mexico and the Beaufort Sea
a
ab gAdjusted r
2
Northern Gulf of Mexico
a
g
(275) 3.5 m
1
3.4707 1.8591 1.2421 0.92
a
g
(275) > 3.5 m
1
2.9031 2.7703 2.0400 0.95
Beaufort Sea
a
g
(275) 3.5 m
1
4.2952 0.1153 0.3187 0.80
a
g
(275) > 3.5 m
1
2.3603 3.0395 2.1298 0.96
a
See equation (2).
Figure 3. (a) [DOC] estimated using a single linear regres-
sion of ln [DOC] against ln [a
g
(355)] in the Northern Gulf of
Mexico; (b) [DOC] estimated using the new approach in the
Northern Gulf of Mexico. (c) [DOC] estimated using the
new approach in the Beaufort Sea, after reparameterization
of the model using local data (see Figure 4 in the Auxiliary
Material for station locations). In all plots, Estimated
DOCindicates concentrations estimated from a
g
(l).
FICHOT AND BENNER: DOC ESTIMATES FROM CDOM ABSORPTION COEFFICIENTS L03610L03610
4of5
chemical composition of DOM is less influenced by ter-
rigenous inputs (e.g., Sargasso Sea), the validity of the
approach itself remains to be assessed.
[18] Besides its simplicity of implementation, this method
presents a number of advantages that make it suitable for
highresolution and longterm in situ monitoring of [DOC]
in coastal environments. First, absorbance measurements at
only two wavelengths are required, which can be acquired at
a fast rate while storing minimal amounts of data. Second,
the values of a
g
(275) and a
g
(295) are high in most environ-
ments thereby making the approach less sensitive to limita-
tions in the precision of the instrument. Third, the relationship
between [DOC] and a
g
(275) or a
g
(295) should remain
minimally affected by changes in inorganic ion concentra-
tions (e.g., nitrate, nitrite, bromide and bisulfide) [Johnson
and Coletti, 2002]. Finally, if the model is parameter-
ized using representative data, the approach should be
applicable to a given region for all seasons using a single
parameterization.
[19]Acknowledgments. This work was supported by the National
Science Foundation (NGoM grants NSF 0850653 and 0713915 to R. Benner,
OCE0752254 to S. E. Lohrenz and OCE0752110 to WJ. Cai; Arctic grant
NSF 0125301 to R. Benner). We thank S. E. Lohrenz, WJ. Cai and K.
Gundersen for providing a berth on the GULFCARBON cruises, and L.
Powers and the crews of the R/V Cape Hatteras and the R/V Hugh Sharp
for their assistance with sample collection. We are grateful to M. Babin
and S. Bélanger for providing a berth on the MALINA cruise.Finally,we
thank Y. Shen and S. Walker for some sample measurements and two anon-
ymous reviewers for their constructive comments.
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R. Benner and C. G. Fichot, Marine Science Program, University of
South Carolina, Columbia, SC 29208, USA. (benner@mailbox.sc.edu;
cgfichot@gmail.com)
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... Terrigenous DOC is typically rich in coloured dissolved organic matter, CDOM (Coble, 2007;Massicotte et al., 2017), and 55 terrigenous CDOM typically has distinct optical properties compared to CDOM in the open ocean and coastal seas (Stedmon and Nelson, 2015). Specifically, CDOM spectral slopes at ultraviolet wavelengths (Helms et al., 2008) and specific UV absorbance at 254 nm, SUVA254 (Traina et al., 1990;Weishaar et al., 2003) have become widely used metrics to distinguish terrigenous dissolved organic matter (DOM) from autochthonous DOM produced in aquatic environments (Asmala et al., 2016;Fichot and Benner, 2011;Lønborg et al., 2021a;Zhou et al., 2021). 60 ...
... The low values of S275-295, SR, and elevated SUVA254 (Figs. 3c,e,f) are consistent with a predominantly terrestrial DOM source 310 within the Johor River estuary. These CDOM parameters are used widely to trace terrigenous DOM in estuaries and riverinfluenced coastal seas (Clark and Mannino, 2021;Fichot and Benner, 2011;Lu et al., 2016). SUVA254 is proportional to the DOM aromaticity (Weishaar et al., 2003) and terrigenous DOM typically has high SUVA254 (Massicotte et al., 2017). ...
... The data from the Johor Strait showed more variability in the CDOM properties. The low values of S275-295 and SR in most of these samples (below 0.018 and 1.1, respectively), are typically associated with terrigenous DOM in river-influenced coastal margins (Fichot and Benner, 2011;Carr et al., 2019;Lønborg et al., 2021a;Zhou et al., 2021). The low surface salinities in the 330 Johor Strait found in the present study and reported previously (Gin et al., 2000;Kok and Leong, 2019;Mohd-Din et al., 2020) suggest that terrigenous DOM input from runoff probably does contribute to the DOM pool in the strait, while the fringing mangroves along the strait will also supply terrigenous DOM. ...
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Estuaries have strong physicochemical gradients that lead to complex variability and often high rates of biogeochemical processes. The biogeochemistry of many estuaries is also increasingly impacted by human activities. Yet our understanding of estuarine biogeochemistry remains skewed towards temperate systems in the northern hemisphere, with far less research from tropical estuaries. This study examined seasonal and spatial variability in dissolved organic matter (DOM) and nutrient biogeochemistry along a partly eutrophic, mixed agricultural/urban estuary system in Southeast Asia, the Johor River and the East Johor Strait. Dissolved organic carbon (DOC) and chromophoric DOM (CDOM) properties showed non-conservative mixing, indicating significant DOM inputs along the estuary. The CDOM spectral slopes and CDOM:DOC ratios suggest that these inputs are dominated by terrigenous, soil-derived DOM along the Johor River, but that phytoplankton production and microbial recycling are more important DOM sources in the Johor Strait. Nitrate consistently showed conservative mixing, while nitrite concentrations peaked at intermediate salinities of 10–25. Ammonia decreased with salinity in the Johor River. In the Johor Strait, however, ammonia increased up to 50 µmol l-1, often dominating the dissolved inorganic nitrogen (DIN) pool. Phosphate was low (<0.5 µmol l-1) throughout the Johor River, but increased in the Johor Strait, where DIN:phosphate ratios were typically at or above 16:1. This suggests that phytoplankton in the Johor Strait may sometimes experience phosphorus limitation. Moreover, internal recycling is likely important for maintaining high nutrient concentrations in the Johor Strait.
... This can provide a first order indication of DOM abundance but is often difficult to link to DOC as the relationship will vary depending on DOM character (origin or extent of processing). An improved relationship can be derived by including spectral measurements, where changing DOM characteristics can be taken into account (Fichot & Benner, 2011;Gonçalves-Araujo et al., 2020;Shen et al., 2016). Many aromatic organic compounds absorb light at UV wavelengths, and it therefore makes sense to attempt to link both the intensity (CDOM absorption at a specific wavelength (λ), aCDOM λ ), and spectral shape of absorption in the UV, to DOC concentration. ...
... Absorption intensities from selected wavelengths can be used to improve the prediction of DOC (Fichot & Benner, 2011;Shen et al., 2016), going beyond a simple linear correlation between a CDOM (λ) and DOC (Massicotte et al., 2017). For example, Fichot and Benner (2011), hereafter FB2011 (Table S1 in Supporting Information S1), performed multiple linear regressions of log-transformed DOC concentrations against log-transformed a CDOM (275) and a CDOM (295) to surface waters from the Beaufort Sea (n = 33), and additional segregation of model fit depending on high or low CDOM regimes. ...
... Absorption intensities from selected wavelengths can be used to improve the prediction of DOC (Fichot & Benner, 2011;Shen et al., 2016), going beyond a simple linear correlation between a CDOM (λ) and DOC (Massicotte et al., 2017). For example, Fichot and Benner (2011), hereafter FB2011 (Table S1 in Supporting Information S1), performed multiple linear regressions of log-transformed DOC concentrations against log-transformed a CDOM (275) and a CDOM (295) to surface waters from the Beaufort Sea (n = 33), and additional segregation of model fit depending on high or low CDOM regimes. The approach was later adapted and refined to extend coverage to the North American sector of the Arctic Ocean (Shen et al., 2016;hereafter SH2016; Table S1 in Supporting Information S1) using a larger number of observations (n = 755). ...
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Sampling for dissolved organic carbon (DOC) in the Arctic is challenging given the limited access and because it is not yet possible to measure with instruments deployed in situ. Compared to DOC, colored dissolved organic matter (CDOM) absorption spectroscopy is an easy‐to‐measure, relatively quick and cost‐effective approach which is often closely related to DOC concentrations in water samples. Here we present an algorithm based on quantitative and qualitative metrics of CDOM to provide DOC estimates derived from a Pan‐Arctic data set (n = 3,302) spanning rivers to deep ocean, with DOC ranging between 31 and 1,958 μM. The algorithm provided robust DOC estimates (r² = 0.94; p < 0.0001) and could reproduce DOC profiles and mixing plots across different locations in the Arctic Ocean. Besides its simplicity, this method is capable of capturing the extremely broad range of DOC within the strong gradients observed between Arctic riverine and marine systems.
... Photobleaching also alters the fluorescence properties of dissolved organic matter, imprinting distinctive features in the fluorescence excitation-emission matrix that are frequently used to diagnose past solar exposure (Hansen et al., 2016;Murphy et al., 2018;Tzortziou et al., 2007). Photobleaching also consistently operates faster than the photo-mineralization of dissolved organic carbon (DOC), leading to the decoupling of these two entities' dynamics and complicating the use of CDOM absorption as an optical proxy of DOC concentration (Bonelli et al., 2022;Cao et al., 2018;Del Vecchio and Blough, 2002;Fichot and Benner, 2011). ...
... For both methodology, measurements were made against a blank of purified water (Millipore Milli-Q water) after samples and blanks were equilibrated to room temperature (Pegau et al., 1997). For freshwater and estuarine water samples, the CDOM absorption spectra of freshwater and estuarine samples were measured using a Perkin Elmer Lambda-650 UV-visible dual-beam spectrophotometer and 5-cm pathlength cylindrical quartz cells (Fichot and Benner, 2011;. For ocean water samples, the CDOM absorption spectra of ocean samples were measured using a TiDAS S300 UV/VIS (190-720-nm, 1-nm resolution) photodiode array (PDA) spectrophotometer system equipped with an integrated deuterium light source, and outfitted with a 100-cm liquid waveguide capillary cell (LWCC, Word Precision Instrument), following recommended protocols (Mannino et al., 2019). ...
... a 254 and DOC showed parallel distribution, confirming that this optical index is a good proxy for the variability of DOC in these ocean waters. a 254 is not directly affected by the incident solar UV radiation as few photons with wavelengths shorter than 295 nm reach the Earth's surface (Fichot and Benner, 2011). Therefore, molecules absorbing at 254 nm can accumulate at the surface as DOC. ...
... Molecular weight and photodegradation was evaluated in our samples using the a 254 /a 365 ratio, as previous studies (De Haan and De Boer, 1987;Peuravuori and Pihlaja, 1997;Helms et al., 2008) have demonstrated that the ratio of the absorption coefficients at 250nm and 365nm was a proxy of the average molecular weight of CDOM. In the surface waters north and south of the CVF it was very high (about 21) as a consequence of the photochemical decomposition of the aromatic molecules that absorb light at wavelengths >300 nm (Fichot and Benner, 2011). Then, the ratio decreased with depth to 8-9, except for the LNEADW, which presented an average value close to 11.5. ...
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Our current knowledge of the chemical composition of ocean dissolved organic matter (DOM) is limited, mainly because of its extreme molecular diversity, low concentration of individual compounds and the elevated ionic strength of ocean waters. As a result, many analytical methods require a previous extraction step. The efficiency and selectivity of the extraction method defines the representativeness of the extracted DOM fraction. Nowadays, the most widespread procedure for concentrating DOM is solid phase extraction (SPE) using styrene divinyl benzene polymer cartridges (PPL). Here, we investigate the effect of SPE-PPL on DOM elemental and optical properties to assess the efficiency and selectivity of this extraction method on water samples from the main intermediate and deep water masses of Arctic, Mediterranean and Antarctic origin present in the Cape Vert Frontal Zone (CVFZ, NW Africa). Furthermore, North and South Atlantic Central waters converge in this area and coastal DOM is injected by the giant upwelling filament of Cape Blanc. On one side, the colored fraction of DOM (CDOM) presented extraction efficiencies comparable to that of the bulk dissolved organic carbon (DOC), but decreased significantly with increasing wavelength, suggesting an affinity of PPL cartridges for low molecular weight organic compounds. While the protein-like fluorescent fraction of DOM (FDOM) was also extracted with the same efficiency than DOC, the extraction efficiency of the humic-like fraction was comparatively much higher. On the other side, dissolved organic nitrogen (DON) extraction efficiencies were about half that of DOC. These contrasting extraction efficiencies of the different DOM pools indicated that the extracts were enriched in N-poor, low molecular weight and recalcitrant DOM, therefore showing less variability than the corresponding bulk DOM. Furthermore, DOC, DON, CDOM and FDOM extracted were not homogeneous through the water column but displayed certain significant differences among water masses in both efficiency and selectivity.
... For instance, the absorption coefficient of phytoplankton (a ph (λ), in m −1 ) is particularly important for accurate estimation of PP [7][8][9], while the particulate backscattering coefficient (b bp (λ), in m −1 ) is a useful proxy for the concentration of particulate organic carbon (POC) in global oceans [10,11]. Colored dissolved organic matter (CDOM) contributes significantly to the dissolved organic carbon (DOC) pool, and absorption by CDOM (a g (λ), in m −1 ) is conventionally employed to remotely estimate DOC concentration, especially in estuarine and coastal waters [12,13]. Previous studies have investigated the spatial-temporal variabilities of PP and POC using remotely sensed IOPs in the SO [9,10]; however, the robustness of satellite IOPs products has not been well investigated. ...
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Remotely sensed inherent optical properties (IOPs) are key proxies for synoptic mapping of primary production and carbon export in the global ocean. However, the IOPs inversion algorithms are scarcely evaluated in the Southern Ocean (SO) because of limited field observations. In this study, the performance of two widely used semi-analytical algorithms (SAAs), i.e., the quasi-analytical algorithm (QAA) and the generalized IOP model (GIOP), were evaluated using a compiled in situ bio-optical dataset in SO, as well as measurements from the Visible Infrared Imaging Radiometer Suite (VIIRS). Evaluations with in situ data show that QAA and GIOP have comparable performance in retrieving the total absorption coefficient (a(λ)), absorption coefficients of phytoplankton (aph(λ)), and that of detritus and colored dissolved organic matter (adg(λ)). Overall, it was found that remotely sensed a(λ) and aph(λ) by both SAAs agreed well with field measurements, with the mean absolute percentage difference (MAPD) of derived a(λ) and aph(λ) in the blue-green bands being ∼20% and ∼40%, respectively. However, derived adg(λ) by both SAAs were higher than the measured values at the lower end (adg(443) < ∼0.01 m⁻¹), but lower at the higher end (adg(443) > ∼0.02 m⁻¹), with MAPD of ∼60%. Results of this effort suggest confident products of a(λ) and aph(λ) from VIIRS in SO, but more dedicated efforts on the measurements and evaluation of adg(λ) in SO would be desired.
... The relationship between parameters associated with CDOM in inland water and DOC is widely acknowledged and supported by substantial evidence, as depicted in Figure 2 [14,17,[41][42][43][44]. The indirect inversion of the DOC concentration using the absorption properties of the optically active substance CDOM in water mainly relies on the conservative mixing relationship between CDOM and DOC. ...
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Chromophoric dissolved organic matter (CDOM) is a significant contributor to the biogeochemical cycle and energy dynamics within aquatic ecosystems. Hence, the implementation of a systematic and comprehensive monitoring and governance framework for the CDOM in inland waters holds significant importance. This study conducted the retrieval of CDOM in Lake Khanka. Specifically, we use the GBDT (R2 = 0.84) algorithm which performed best in retrieving CDOM levels and an empirical relationship based on the situ data between CDOM and dissolved organic carbon (DOC) to indicate the distribution of DOC indirectly. The performance of the CDOM-DOC retrieval scheme was reasonably good, achieving an R2 value of 0.69. The empirical algorithms were utilized for the analysis of Sentinel-3 datasets from the period 2016 to 2020 in Lake Khanka. The potential factors that contributed to the sources of DOM were also analyzed with the humification index (HIX). The significant relationship between CDOM and DOC (HIX and chemical oxygen demand (COD)) indicated the potential remote sensing application of water quality monitoring for water management. An analysis of our findings suggests that the water quality of the Great Khanka is superior to that of the Small Khanka. Moreover, the distribution of diverse organic matter exhibits a pattern where concentrations are generally higher along the shoreline compared to the center of the lake. Efficient measures should be promptly implemented to safeguard the water resources in international boundary lakes such as Lake Khanka and comprehensive monitoring systems including DOM distribution, DOM sources, and water quality management would be essential for water resource protection and government management.
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The Labrador Sea is a region of the North Atlantic known for its strong ocean currents and deep water formation, which contribute to the transport and mixing of water masses throughout the region. The absorbing and fluorescing properties of dissolved organic matter (DOM) were assessed to track the water masses and the in situ production in the Labrador Sea (>200 m). No significant differences in DOM composition were found in the mesopelagic waters (200–1,000 m). In the bathypelagic waters (1,000–4,000 m), the estimated dissolved organic carbon (DOC) and dissolved lignin concentrations, as well as humic‐like fluorescence intensities, allowed the discrimination of North East Atlantic Deep Water versus Denmark Strait overflow water. The humic‐like intensities were significantly different between upper Labrador Sea water (uLSW) and deep LSW (dLSW) suggesting their applications as tracers of deep winter mixing. The significant correlations with apparent oxygen utilization support the in situ production of humic‐like fluorescence and the net microbial consumption of DOC and lignin in the dark Labrador Sea. We also demonstrated that microbial activities play a role in the production of humic‐like compounds in the dLSW that experiences deep convection mixing.
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Oceanographic cruises were conducted within the U.S. Middle Atlantic Bight (MAB) to collect field measurements to develop algorithms to retrieve surface ocean colored dissolved organic matter (CDOM) and dissolved organic carbon (DOC) from NASA's MODIS-Aqua and SeaWiFS satellite sensors and to investigate the processes that influence the distributions of CDOM and DOC. In order to develop empirical algorithms for CDOM and DOC, the CDOM absorption coefficient (aCDOM) was correlated with in situ remote sensing reflectance band ratios, and DOC was then derived from aCDOM through the aCDOM to DOC relationships. Our validation analyses demonstrate successful retrieval of DOC and CDOM using MODIS and SeaWiFS with mean absolute percent differences from field measurements of 9.3 ± 7.3% for DOC, 19 ± 14% for aCDOM(355), 15.5 ± 12% for aCDOM(443), and 8.6 ± 4.9% for the CDOM spectral slope. To our knowledge, the algorithms presented here represent the first validated algorithms for satellite retrieval of aCDOM, DOC, and CDOM spectral slope in the coastal ocean. Satellite imagery demonstrates the importance of riverine/estuarine discharge from Chesapeake Bay and Delaware Bay to the export of CDOM and DOC to the coastal ocean. Between spring and summer, photooxidation has a significant impact on CDOM distributions resulting in a pronounced decrease in aCDOM between the midshelf and continental slope region of the MAB. The satellite-derived DOC products demonstrate the net ecosystem production of DOC of 12 to 34 μmol C L-1 between spring and summer. The aCDOM algorithms presented here are applicable to other coastal regions and can also be used to retrieve DOC using region-specific aCDOM to DOC relationships.
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The spring-to-summer seasonal transition in the spatial and vertical distribution of chromophoric dissolved organic matter (CDOM) optical properties was examined during surveys conducted in March, May, July, and August of 2005 in the waters influenced by the Mississippi-Atchafalaya River system of the northwestern Gulf of Mexico. Strong seasonal river influences and a well-correlated inverse relationship between CDOM absorption at 412 nm and salinity during spring of 2005 suggests conservative mixing in the water column between the riverine freshwater sources and the oceanic end members. Trends in the CDOM absorption and the spectral absorption slope (S) and deviations from the end-member conservative mixing line in surface and bottom waters during the summer suggest apparent sources and sinks of CDOM. Elevated CDOM in lower-salinity surface waters at many stations appears to be linked to high concentrations of dissolved oxygen (DO; .10 mg L21) and elevated chlorophyll concentrations. Effects of photo-oxidation in surface waters were observed as increasing S and enhanced CDOM loss in the ,27-32 salinity range and were attributed to seasonal stratification and the increased solar radiation during the summer. In the bottom waters, elevated CDOM levels in the ,32-36 salinity range were associated with low DO and relatively higher bacterial abundance; this suggests a potential CDOM source due to microbial remineralization of organic matter in the hypoxic zone in bottom waters. Seasonal dynamics associated with CDOM loss in surface waters and CDOM gains in bottom waters may be another pathway influencing hypoxia in coastal waters. An important energy source in the microbial food web, dissolved organic matter (DOM) comprises a large fraction
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A new approach for parameterizing dissolved organic matter ( DOM) ultraviolet-visible absorption spectra is presented. Two distinct spectral slope regions ( 275-295 nm and 350-400 nm) within log-transformed absorption spectra were used to compare DOM from contrasting water types, ranging from wetlands (Great Dismal Swamp and Suwannee River) to photobleached oceanic water ( Atlantic Ocean). On the basis of DOM size-fractionation studies ( ultrafiltration and gel filtration chromatography), the slope of the 275-295- nm region and the ratio of these slopes (S-R; 275-295- nm slope : 350-400- nm slope) were related to DOM molecular weight ( MW) and to photochemically induced shifts in MW. Dark aerobic microbial alteration of chromophoric DOM ( CDOM) resulted in spectral slope changes opposite of those caused by photochemistry. Along an axial transect in the Delaware Estuary, large variations in S-R were measured, probably due to mixing, photodegradation, and microbial alteration of CDOM as terrestrially der
Chapter
This chapter presents a discussion on chromophoric dissolved organic matter (DOM) in the coastal environment. Over the past decade, there has been a renewed interest in the properties and distribution of the major light-absorbing constituent of the DOM pool in natural waters (the 0.2 μm fraction). This material—referred in the past by various names such as Gelbstoff, yellow substance, gilvin, and humic substances) has more recently been provided the name chromophoric dissolved organic matter (CDOM). This designation more clearly highlights that this material absorbs not only visible light but also light in the UV-A (wavelengths from 315–400 nm) and UV-B (wavelengths from 280–315 nm), which are also part of the surface solar spectrum. By this definition—absorption at wavelengths over the range of surface solar radiation—CDOM represents only a portion of the total DOM pool. Although both “CDOM” and “humic substances” refer to the chemically complex, light-absorbing material produced by the decay of plant and algal matter, the use of “CDOM” is restricted to the material that is present in natural waters. However, the use of “humic substances” refers to material that is extractable from natural waters. This discrimination is necessary because the extracted materials are not always representative of those found in the original waters.
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Spatial and seasonal distributions of chromophoric dissolved organic matter (CDOM) absorption, fluorescence (excited at 355 nm; Fn) and dissolved organic carbon (DOC) concentration in coastal waters of the Middle Atlantic Bight (MAB) were acquired. A linear relationship was observed between CDOM absorption at 355 nm [aCDOM(355)] and Fn on the shelf of the MAB (aCDOM(355)≤1 m−1), but this relationship curved downward for higher aCDOM(355) and Fn values in the Chesapeake Bay (CB) and the Delaware Bay (DB) source waters (aCDOM(355)≥1 m−1), suggesting the presence of different end members with higher Fn/aCDOM(355) ratios, the occurrence of a photochemical/biological processing of the CDOM as it moves down the estuaries or the involvement of both of these processes. Strong evidence was acquired for the photobleaching of CDOM in the surface waters of the MAB during summertime stratification, as indicated by the highly nonlinear dependence of aCDOM(355) and Fn on salinity in surface waters, the concomitant increase of the CDOM spectral slope parameter (S) and the much lower ratio of aCDOM to DOC (aCDOM/DOC) observed in surface waters. The aCDOM/DOC ratio decreased by over an order of magnitude with increasing salinity, owing primarily to two reasons: (1) the substantial photobleaching of CDOM in the surface waters of the shelf and (2) the very different content of CDOM and DOC in the freshwater and oceanic end members. These results indicate that CDOM represents only a small portion of the DOC pool in offshore waters and that the sources and sinks of CDOM and DOC are uncoupled despite the often-observed correlation between CDOM and DOC in the coastal environment.
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The effects of monochromatic and polychromatic UV and visible (VIS) radiation on the optical properties (absorption and fluorescence) of chromophoric dissolved organic matter (CDOM) were examined for a Suwannee River fulvic acid (SRFA) standard and for water from the Delaware and Chesapeake Bays. The primary (direct) loss of absorption and fluorescence occurred at the irradiation wavelength(s), with smaller secondary (indirect) losses occurring outside the irradiation wavelength(s). The efficiency of both direct and indirect photobleaching decreased monotonically with increasing wavelength. Exposure to polychromatic light increased the CDOM absorption spectral slope (S), consistent with previous field measurements. An analysis of the monochromatic photobleaching kinetics argues that a model based on a simple superposition of multiple chromophores undergoing independent photobleaching cannot apply; this conclusion further implies that the absorption spectrum of CDOM cannot arise solely from a simple superposition of the spectra of numerous independent chromophores. The kinetics of CDOM absorption loss with the monochromatic irradiation were employed to create a simple, heuristic model of photobleaching. This model allowed us to examine the importance of the indirect photobleaching losses in determining the overall photobleaching rates as well as to model the photobleaching of natural waters under polychromatic light fields. Application of this model to natural waters closely predicted the change in the CDOM spectral shape caused by photodegradation. The time scale of this process was consistent with field observations acquired during the summertime for coastal waters in the Middle Atlantic Bight (MAB). The results indicate that the ratio of the photodegradation depth to the mixed layer depth is a key parameter controlling the rate of the photobleaching in surface waters.