Jing Pu's research while affiliated with Fudan University and other places

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Publications (5)


Fig. 2. Pathological changes after specific infection of AT2 cells by SARS-CoV-2. (A and B) Schematic diagrams illustrating the knock-in strategy of R26-hACE2-tdT mouse line by homologous recombination (A) and the strategy for inducing hACE2 and tdT expression (B). (C) Cartoon image showing that the R26-hACE2-tdT model could be combined with different genetic models for inducing expression of hACE2 in target cell type according to the research needs. (D) A schematic diagram illustrating the experimental design. (E) Whole-mount views of the lungs of Sftpc-CreER;R26-hACE2-tdT mice after tam treatment. (F) Immunostaining for tdTomato, hACE2, and Sftpc on lung sections of Sftpc-CreER;R26-hACE2-tdT mice. Yellow arrowheads indicate tdT + hACE2 + Sftpc + AT2 cells. Quantification of the percentage of AT2 cells expressing hACE2. Data are presented as mean ± SD; n = 4 mice per group. (G) A schematic diagram illustrating the virus infection strategy. (H) Immunostaining for tdT and SARS-CoV-2 S protein on lung sections at 4 days post infection (dpi) and uninfected mice. (I) Quantification of the percentage of tdT+ cells infected by SARS-CoV-2 in damaged regions. n = 4 mice per group. (J) RT-qPCR quantification of SARS-CoV-2 ORF gene expression in the lungs in uninfected, 4, 7, and 14 dpi. Data are presented as mean ± SD; n = 3 or 4 mice per group. Unpaired, two-tailed t test. (K) H&E staining of lung tissues in uninfected, 4, 7, and 14 dpi groups. (L) H&E score of the lung injuries in uninfected, 4, 7, and 14 dpi groups. P value was calculated by unpaired two-tailed Student's t test. Data are presented as mean ± SD; n = 3 or 4 mice per group. (M) IHC staining for CD45 + immune cells of lungs in uninfected, 4, 7, and 14 dpi groups. (N) Quantification of the cell number of CD45 + immune cells of infected lung tissues. P value was calculated by unpaired two-tailed Student's t test. Data are presented as mean ± SD; n = 3 or 4 mice per group. (O) Cartoon image showing that the Sftpc-CreER;R26-hACE2-tdT model could be specifically used for inducing the expression of hACE2 and tdT in AT2 cells. After host cell entry, SARS-CoV-2 virus could specifically infect AT2 cells via hACE2, resulting in epithelium-derived lung pneumonia. Tam, tamoxifen. tdT, tdTomato. A-tubulin, Acetylated-tubulin. (Scale bars, yellow, 1 mm; white, 100 μm; black, 200 μm.)
Fig. 3. Pathological changes after specific infection of bronchiolar club cells by SARS-CoV-2. (A) A schematic diagram illustrating the experimental design. (B) Whole-mount views of the lungs of Scgb1a1-CreER;R26-hACE2-tdT mice after tam treatment. (C) Immunostaining for tdTomato, hACE2, and Scgb1a1 on lung sections of Scgb1a1-CreER;R26-hACE2-tdT mice. Yellow arrowheads indicate tdT + hACE2 + Scgb1a1 + club cells. Quantification of the percentage of club cells expressing hACE2. Data are presented as mean ± SD; n = 4 mice per group. (D) A schematic diagram illustrating the virus infection strategy. (E) Immunostaining for tdT and SARS-CoV-2 S protein on lung sections at 4 dpi and uninfected mice. (F) Quantification of the percentage of tdT + cells infected by SARS-CoV-2 in damaged regions. n = 4 mice per group. (G) RT-qPCR quantification of SARS-CoV-2 ORF gene expression in the lungs in uninfected, 4, 7, and 14 dpi groups. Data are presented as mean ± SD; n = 3 or 4 mice per group. P value was calculated by unpaired two-tailed Student's t test. (H) H&E staining of the lung tissues in uninfected, 4, 7, and 14 dpi groups. (I) H&E score of the lung injuries in uninfected, 4, 7, and 14 dpi groups. P value was calculated by unpaired two-tailed Student's t test. Data are presented as mean ± SD; n = 3 or 4 mice per group. (J) IHC staining for CD45 + immune cells of lungs in uninfected, 4, 7, and 14 dpi groups. (K) Quantification of the cell number of CD45+ immune cells of infected lung tissues. P value was calculated by unpaired two-tailed Student's t test. Data are presented as mean ± SD; n = 3 or 4 mice per group. (L) Cartoon image showing that specific expression of hACE2 in club cells results in lung pneumonia after SARS-CoV-2 infection. Tam, tamoxifen. tdT, tdTomato. A-tubulin, Acetylated-tubulin. (Scale bars, yellow, 1 mm; white, 100 μm; black, 200 μm.)
An inducible hACE2 transgenic mouse model recapitulates SARS-CoV-2 infection and pathogenesis in vivo
  • Article
  • Full-text available

June 2023

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149 Reads

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1 Citation

Proceedings of the National Academy of Sciences

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Muxue Tang

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Wei Xu

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[...]

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The classical manifestation of COVID-19 is pulmonary infection. After host cell entry via human angiotensin-converting enzyme II (hACE2), the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus can infect pulmonary epithelial cells, especially the AT2 (alveolar type II) cells that are crucial for maintaining normal lung function. However, previous hACE2 transgenic models have failed to specifically and efficiently target the cell types that express hACE2 in humans, especially AT2 cells. In this study, we report an inducible, transgenic hACE2 mouse line and showcase three examples for specifically expressing hACE2 in three different lung epithelial cells, including AT2 cells, club cells, and ciliated cells. Moreover, all these mice models develop severe pneumonia after SARS-CoV-2 infection. This study demonstrates that the hACE2 model can be used to precisely study any cell type of interest with regard to COVID-19-related pathologies.

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A Palmitic Acid-Conjugated, Peptide-Based pan-CoV Fusion Inhibitor Potently Inhibits Infection of SARS-CoV-2 Omicron and Other Variants of Concern

March 2022

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82 Reads

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12 Citations

Viruses

Viruses

Our previous studies have shown that cholesterol-conjugated, peptide-based pan-coronavirus (CoV) fusion inhibitors can potently inhibit human CoV infection. However, only palmitic acid (C16)-based lipopeptide drugs have been tested clinically, suggesting that the development of C16-based lipopeptide drugs is feasible. Here, we designed and synthesized a C16-modified pan-CoV fusion inhibitor, EK1-C16, and found that it potently inhibited infection by SARS-CoV-2 and its variants of concern (VOCs), including Omicron, and other human CoVs and bat SARS-related CoVs (SARSr-CoVs). These results suggest that EK1-C16 could be further developed for clinical use to prevent and treat infection by the currently circulating MERS-CoV, SARS-CoV-2 and its VOCs, as well as any future emerging or re-emerging coronaviruses.


Peptide-Based HIV Entry Inhibitors

January 2022

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18 Reads

Advances in Experimental Medicine and Biology

The development of peptide-based HIV entry inhibitors has made an important contribution to the stock of anti-HIV drugs. In particular, the peptide-based anti-HIV drugs enfuvirtide and albuvirtide were approved for clinical use by the U.S. FDA and CFDA in 2003 and 2018, respectively. Peptide-based HIV entry inhibitors exert antiviral activity by targeting the early stage of viral infection, i.e., binding of a viral surface protein to the receptor(s) on the host cell and the subsequent fusion between the viral and host cell membranes. Therefore, they are particularly useful for HIV-infected patients who have failed to respond to the highly active antiretroviral drugs (ARD) targeting the late stage of HIV replication, such as reverse transcriptase inhibitors and protease inhibitors. In this chapter, we will focus on the past, current, and future trends in research and development of peptide-based HIV entry inhibitors.



Schematic diagram of HIV-1 entry into target cell. (a) Binding of gp120 to CD4 receptor; (b) Binding of gp120 to the coreceptor CCR5 / CXCR4; (c) Formation of prehairpin intermediate (PFI) and connection of viral membrane and cell membrane; (d) Formation of six-helix bundle (6HB); (e) HIV-1 releases its genome into target cells.
Ectodomain structure of HIV-1 Env trimer. (A) Schematic diagram of HIV-1 gp120 and gp41. (B) Side view of the Env trimer. Gp120 is colored in green with the V1, V2, V3, V4, and V5 regions colored in red, brown, purple, orange and yellow, respectively. CD4bs is marked with a white dotted frame. Gp41 is colored in light pink with the fusion peptide (FP), N-terminal heptad repeats (NHR), C-terminal heptad repeats (CHR) and membrane-proximal external region (MPER) regions colored in blue, cycan, bright gray and cycan-blue, respectively. The images were generated with the software PyMOL according to the PDB ID: 5VJ6.
Tripartite model of gp41 N-terminal heptad repeats (NHR) with side view and C-terminal heptad repeats (CHR)-derived peptides. Above, the sequences of CHR-peptides targeting NHR. Residues represent pocket-binding domain and lipid- binding domain marked in blue and orange, respectively. Below, residues of CHR are divided into three groups: major binding sites α, assistant binding sites β, and non-binding sites γ. The potential interaction, or interaction, between CHR and NHR is shown in blue or red dashed lines.
Tripartite model of gp41 C-terminal heptad repeats (CHR) with side view and N-terminal heptad repeats (NHR)-derived peptides. Above, the sequences of peptides targeting CHR. The sequences of Fd are underlined. Below, residues of CHR are divided into three groups: major binding sites α, assistant binding sites β, and nonbinding sites γ. The interaction, or potential interaction, between CHR and NHR is shown in red or blue dashed lines.
Development of Protein- and Peptide-Based HIV Entry Inhibitors Targeting gp120 or gp41

August 2019

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1,230 Reads

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35 Citations

Viruses

Viruses

Application of highly active antiretroviral drugs (ARDs) effectively reduces morbidity and mortality in HIV-infected individuals. However, the emergence of multiple drug-resistant strains has led to the increased failure of ARDs, thus calling for the development of anti-HIV drugs with targets or mechanisms of action different from those of the current ARDs. The first peptide-based HIV entry inhibitor, enfuvirtide, was approved by the U.S. FDA in 2003 for treatment of HIV/AIDS patients who have failed to respond to the current ARDs, which has stimulated the development of several series of protein- and peptide-based HIV entry inhibitors in preclinical and clinical studies. In this review, we highlighted the properties and mechanisms of action for those promising protein- and peptide-based HIV entry inhibitors targeting the HIV-1 gp120 or gp41 and discussed their advantages and disadvantages, compared with the current ARDs.

Citations (3)


... This interest is also fueled by the wide adaptability, high safety and remarkable efficacy of this approach. In particular, peptide-based pan-coronavirus fusion inhibitors can effectively inhibit infections by SARS-CoV-2 and its variants, as well as other human coronaviruses [10][11][12][13][14][15][16]. Although laboratory experiments can identify novel anti-coronavirus peptides (ACVPs), this process is expensive and time consuming. ...

Reference:

FEOpti-ACVP: identification of novel anti-coronavirus peptide sequences based on feature engineering and optimization
A Palmitic Acid-Conjugated, Peptide-Based pan-CoV Fusion Inhibitor Potently Inhibits Infection of SARS-CoV-2 Omicron and Other Variants of Concern
Viruses

Viruses

... Cenicriviroc and CHEMBL41275 were identified as antagonists of CCR2 and used in clinical trials for HIV infection and non-alcoholic steatohepatitis (NASH) [67,68]. CCR5 showed a direct association with five antagonists, Maraviroc, Vicriviroc, Aplaviroc, CHEMBL207004 (identified as TAK-220 in STITCH) and Cenicriviroc, which are primarily used for HIV-1 infection [67,[69][70][71][72]. The CXC chemokine receptor CXCR1 showed direct interaction with the drug Navarixin, which is an antagonist used for the treatment of COPD (NCT01006616) and prostate, lung and colorectal cancer (NCT03473925). ...

A “Two-Birds-One-Stone” Approach toward the Design of Bifunctional Human Immunodeficiency Virus Type 1 Entry Inhibitors Targeting the CCR5 Coreceptor and gp41 N-Terminal Heptad Repeat Region
  • Citing Article
  • July 2021

Journal of Medicinal Chemistry

... Enfuvirtide is a peptide-based drug derived from the CHR region of HIV-1 gp41 as the first HIV-1 fusion inhibitor by interacting with the gp41 fusion intermediate. [8][9][10] Because its specific mechanism of action that inhibits the membrane fusion process during HIV-1 entry, enfuvirtide exhibits potent antiviral activity independent of viral tropism and with low potential for cross-resistance to other anti-HIV drugs. [8][9][10] However, enfuvirtide has several shortcomings, including low oral bioavailability, a short half-life, and a low genetic barrier for drug resistance. ...

Development of Protein- and Peptide-Based HIV Entry Inhibitors Targeting gp120 or gp41
Viruses

Viruses