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Fungi
Journal of
Article
A Multidisciplinary Approach to Fungal Infections:
One-Year Experiences of a Center of Expertise
in Mycology
Nico A. F. Janssen 1,2 , Roger J. M. Brüggemann 1,3, Monique H. Reijers 1,4 ,
Stefanie S. V. Henriet 1,5, Jaap ten Oever 2, Quirijn de Mast 2, Yvonne Berk 6,
Elizabeth A. de Kort 1,7 , Bart Jan Kullberg 1,2, Mihai G. Netea 1,2, Jochem B. Buil 1,8 ,
Janette C. Rahamat-Langendoen 8, Didi Bury 3, Eline W. Muilwijk 3,†, Jacques F. Meis 1,9 ,
Paul E. Verweij 1,8 and Frank L. van de Veerdonk 1 ,2 ,*
1Center of Expertise in Mycology Radboudumc/CWZ, 6525 GA Nijmegen, The Netherlands;
nico.janssen@radboudumc.nl (N.A.F.J.); roger.bruggemann@radboudumc.nl (R.J.M.B.);
monique.reijers@radboudumc.nl (M.H.R.); stefanie.henriet@radboudumc.nl (S.S.V.H.);
elizabeth.dekort@radboudumc.nl (E.A.d.K.); bj.kullberg@radboudumc.nl (B.J.K.);
mihai.netea@radboudumc.nl (M.G.N.); jochem.buil@radboudumc.nl (J.B.B.); j.meis@cwz.nl (J.F.M.);
paul.verweij@radboudumc.nl (P.E.V.)
2
Department of Internal Medicine, Radboud University Medical Center, 6525 GA Nijmegen, The Netherlands;
jaap.tenoever@radboudumc.nl (J.t.O.); quirijn.demast@radboudumc.nl (Q.d.M.)
3Department of Pharmacy, Radboud University Medical Center, 6525 GA Nijmegen, The Netherlands;
didi.bury@radboudumc.nl (D.B.); e.w.muilwijk@prinsesmaximacentrum.nl (E.W.M.)
4Department of Pulmonology, Radboud University Medical Center, 6525 GA Nijmegen, The Netherlands
5Department of Pediatric Infectious Diseases and Immunology, Radboudumc Amalia Children’s Hospital,
Radboud University Medical Center, 6525 GA Nijmegen, The Netherlands
6Department of Pulmonary Diseases, Canisius-Wilhelmina Hospital (CWZ), 6532 SZ Nijmegen,
The Netherlands; y.berk@cwz.nl
7Department of Hematology, Radboud University Medical Center, 6525 GA Nijmegen, The Netherlands
8Department of Medical Microbiology, Radboud University Medical Center, 6525 GA Nijmegen,
The Netherlands; janette.rahamat-langendoen@radboudumc.nl
9Department of Medical Microbiology and Infectious Diseases, Canisius-Wilhelmina Hospital (CWZ),
6532 SZ Nijmegen, The Netherlands
*Correspondence: frank.vandeveerdonk@radboudumc.nl; Tel.: +31-24-3619825
†
Current address: Department of Pharmacy, Princess M
á
xima Center for Pediatric Oncology, 3584 CS Utrecht,
The Netherlands.
Received: 14 October 2020; Accepted: 6 November 2020; Published: 10 November 2020
Abstract:
Invasive fungal diseases (IFDs) often represent complicated infections in complex patient
populations. The Center of Expertise in Mycology Radboudumc/CWZ (EMRC) organizes a
biweekly multidisciplinary mycology meeting to discuss patients with severe fungal infections
and to provide comprehensive advice regarding diagnosis and treatment. Here, we describe the
patient population discussed at these meetings during a one-year period with regards to their past
medical history, diagnosis, microbiological and other diagnostic test results and antifungal therapy.
The majority of patients discussed were adults (83.1%), 62.5% of whom suffered from pulmonary
infections or signs/symptoms, 10.9% from otorhinolaryngeal infections and/or oesophagitis, 9.4%
from systemic infections and 9.4% from central nervous system infections. Among children, 53.8%
had pulmonary infections or signs/symptoms, 23.1% systemic fungal infections and 23.1% other,
miscellaneous fungal infections. 52.5% of adult patients with pulmonary infections/symptoms
fulfilled diagnostic criteria for chronic pulmonary aspergillosis (CPA). Culture or polymerase chain
reaction (PCR) demonstrated fungal pathogens in 81.8% of patients, most commonly Aspergillus.
A multidisciplinary mycology meeting can be a useful addition to the care for patients with (I)FDs
and can potentially aid in identifying healthcare and research needs regarding the field of fungal
J. Fungi 2020,6, 274; doi:10.3390/jof6040274 www.mdpi.com/journal/jof
J. Fungi 2020,6, 274 2 of 12
infections. The majority of patients discussed at the multidisciplinary meetings suffered from
pulmonary infections, predominantly CPA.
Keywords: mycology; invasive fungal diseases; multidisciplinary; diagnosis; antifungal treatment
1. Introduction
Fungal infections have a large impact on human health, and invasive fungal diseases (IFDs)
are associated with high mortality rates [
1
–
3
]. It is estimated that global mortality due to IFDs
equals or surpasses that of tuberculosis (TBC) or malaria [
1
]. The reported changing epidemiology
of IFDs in human hosts [
4
,
5
] is partly due to a growing immunocompromised patient population
at risk of these infections, such as those using immunosuppressive medication, allogeneic stem cell
and/or solid organ transplant recipients, and those suffering from human immunodeficiency virus
(HIV) infection or acquired immunodeficiency syndrome (AIDS) [
1
]. Furthermore, new clinical IFD
entities have been recognized, such as invasive pulmonary aspergillosis (IPA) occurring in severely ill
influenza patients, with a high incidence in some geographic regions and a high mortality rate [
6
–
8
],
and coronavirus disease 2019 (COVID-19)-associated pulmonary aspergillosis [
9
,
10
]. In addition,
antifungal resistance has been documented in multiple countries [
11
], is increasing [
12
,
13
], and directly
impacts patient survival. Overall mortality rates are significantly higher in patients with culture-positive
voriconazole-resistant invasive aspergillosis (IA), compared to voriconazole-susceptible cases [
14
,
15
].
Last, the number of antifungal drug classes is limited, and current antifungal agents have many drug
interactions with concomitant medication. These developments have increased the need for expertise
on fungal pathogens, diagnostic options, and resistance management (medical mycology), specific
immune defects in (I)FD patients and options for immunotherapy (adult/paediatric infectious diseases),
and antifungal drugs, with the required exposure profile and drug-interaction management (clinical
pharmacology). As experts in each of these three areas were increasingly consulted individually
regarding patients with complex fungal diseases, we decided to combine their complementary expertise
in the Center of Expertise in Mycology Radboudumc/CWZ (EMRC), and to set up a multidisciplinary
mycology meeting, open to other hospitals to discuss cases through virtual conferencing (Figure 1).
A pulmonologist and haematologist joined our expert team to provide additional expertise in specific
patient populations, comparable to the previously described multidisciplinary team for antifungal
stewardship [16].
During these meetings, patient cases are discussed in a structured manner regarding medical
history, clinical courses, diagnostic test results, microbiological aspects, host immunological aspects,
pharmacological issues, and treatment provided so far. Subsequently, recommendations are
formulated regarding further diagnostic work-up, treatment, and/or follow-up. Additionally, further
specialized microbiological tests (e.g., antifungal susceptibility testing), translational immunological
work-up (e.g., cytokine production assays), and pharmacological laboratory testing (e.g., therapeutic
drug monitoring (TDM)) are offered, if necessary. Currently, the EMRC is not involved in
antifungal stewardship activities, but offers advice on antifungal treatment on a case-by-case basis.
Recommendations for antifungal stewardship have recently been published [
17
]. Patients with fungal
diseases can be registered for the meeting by any physician involved in their care. By providing
multidisciplinary expertise on fungal infections and offering specialized testing, the EMRC aims to
positively impact patient care and translational research with clinical significance for the patient.
As such, it offers a consultancy function accessible to physicians from across the world.
J. Fungi 2020,6, 274 3 of 12
J.Fungi2020,6,xFORPEERREVIEW3of13
Figure1.Impressionofthemultidisciplinarymycologymeeting.
Duringthesemeetings,patientcasesarediscussedinastructuredmannerregardingmedical
history,clinicalcourses,diagnostictestresults,microbiologicalaspects,hostimmunologicalaspects,
pharmacologicalissues,andtreatmentprovidedsofar.Subsequently,recommendationsare
formulatedregardingfurtherdiagnosticwork‐up,treatment,and/orfollow‐up.Additionally,further
specializedmicrobiologicaltests(e.g.,antifungalsusceptibilitytesting),translationalimmunological
work‐up(e.g.,cytokineproductionassays),andpharmacologicallaboratorytesting(e.g.,therapeutic
drugmonitoring(TDM))areoffered,ifnecessary.Currently,theEMRCisnotinvolvedinantifungal
stewardshipactivities,butoffersadviceonantifungaltreatmentonacase‐by‐casebasis.
Recommendationsforantifungalstewardshiphaverecentlybeenpublished[17].Patientswithfungal
diseasescanberegisteredforthemeetingbyanyphysicianinvolvedintheircare.Byproviding
multidisciplinaryexpertiseonfungalinfectionsandofferingspecializedtesting,theEMRCaimsto
positivelyimpactpatientcareandtranslationalresearchwithclinicalsignificanceforthepatient.As
such,itoffersaconsultancyfunctionaccessibletophysiciansfromacrosstheworld.
Here,weaimtoprovideanoverviewofthefungalinfectionsandtheclinical,microbiological
andtreatmentissuesencounteredduringthemultidisciplinarymycologymeetingsthattookplace
duringthefirstyearofsystematicregistrationoftheproceedingsandoutcomesofthesemeetings.
Furthermore,weaimtoprovideotherswithaframeworkforestablishingamultidisciplinaryteam
toaddresstheincreasingcomplexityoffungalinfectionmanagement.
2.MaterialsandMethods
AllpatientsdiscussedduringthebiweeklymultidisciplinarymycologymeetingintheEMRC
wereregisteredinadatabase(MicrosoftExcel).Patienthistoryandclinicalcourse(demographics,
medicalhistory,useofrelevantmedication,signsandsymptoms),diagnostictestresults(radiological
examinations,relevantlaboratoryresults),microbiologicalresults(cultures,polymerasechain
reaction(PCR)results,susceptibilitytesting),informationonhostimmunologicalfactorsand
employedantifungaltreatment(includingTDMresults)wereprovidedinadvancebythepresenting
physician.IfthepatientprimarilyreceivedtreatmentatRadboudumc,thisinformationwasextracted
fromtheelectronicpatientrecord(EpicHyperspace;EpicSystemsCorporation,Verona,WI,USA).
Figure 1. Impression of the multidisciplinary mycology meeting.
Here, we aim to provide an overview of the fungal infections and the clinical, microbiological
and treatment issues encountered during the multidisciplinary mycology meetings that took place
during the first year of systematic registration of the proceedings and outcomes of these meetings.
Furthermore, we aim to provide others with a framework for establishing a multidisciplinary team to
address the increasing complexity of fungal infection management.
2. Materials and Methods
All patients discussed during the biweekly multidisciplinary mycology meeting in the EMRC
were registered in a database (Microsoft Excel). Patient history and clinical course (demographics,
medical history, use of relevant medication, signs and symptoms), diagnostic test results (radiological
examinations, relevant laboratory results), microbiological results (cultures, polymerase chain reaction
(PCR) results, susceptibility testing), information on host immunological factors and employed
antifungal treatment (including TDM results) were provided in advance by the presenting physician.
If the patient primarily received treatment at Radboudumc, this information was extracted from the
electronic patient record (Epic Hyperspace; Epic Systems Corporation, Verona, WI, USA).
For this study, data from patients discussed at the multidisciplinary meetings between 01-07-2017
and 30-06-2018 were included. Statistical analysis was performed using Microsoft Excel 2016 for Office
365 and GraphPad Prism 5 for Windows (GraphPad Software, Inc., San Diego, CA, USA).
3. Results
3.1. Meeting and Patient Characteristics
During the 12 months’ period studied, a total of 27 multidisciplinary mycology meetings were
held (Table 1). In the course of these meetings, 114 patient cases were discussed, pertaining to 77
individual patients with suspected or proven fungal infection. All patients were primarily treated in
Dutch hospitals, located in 6/12 of the Dutch provinces. Of these patients, 65 (84.4%) had never been
discussed in the multidisciplinary meeting before the study period. Although a single consultation
J. Fungi 2020,6, 274 4 of 12
was sought for most patients during this period, the total number of consultations per patient varied
from one to five (Table 1). Most commonly discussed aspects of care were therapy, diagnostic aspects
and follow-up. In most cases, multiple aspects of patient care were discussed (64 patients, 83.1%).
Table 1. Meeting characteristics in the period studied (1 July 2017 to 30 June 2018).
Characteristic Value
Study period (months) 12
Number of meetings 27
Number of patient discussions (n) 114
Number of individual patients discussed (n) 77
Mean number of patients discussed per meeting (n) 4.2
Number of consultations per patient (n, %)
1 51 (66.2)
2 20 (26)
3 3 (3.9)
4 1 (1.3)
5 2 (2.6)
Mean number of consultations per patient 1.48
Aspect(s) of care discussed (n, %) a
Single 12 (15.6)
Multiple 64 (83.1)
Therapy 70 (90.9)
Diagnostic aspects 50 (64.9)
Follow-up 38 (49.4)
Immunological aspects 17 (22.1)
Prophylaxis 4 (5.2)
Antifungal resistance 4 (5.2)
Other 1 (1.3)
aData missing for one patient (1.3%).
Patient characteristics are provided in Table 2. Median age of adult patients (
≥
18 years of age) was
65 years; that of paediatric patients was 4 years at first consultation. Patients were evenly distributed
among sex and all but one had a known past medical history prior to fungal infection. Most prevalent
underlying diseases and comorbidities included previous pulmonary infection(s), asthma, chronic
obstructive pulmonary disease, bronchiectasis, haematological malignancy and diabetes mellitus
(Table 2). Of the patients with a haematological malignancy, 63.6% were children; one (adult) patient
(1.3%) had undergone allogeneic stem cell transplantation. 28.6% of patients used immunosuppressive
medication, including inhaled corticosteroids, and one patient was infected with (HIV).
Patients were presented at the multidisciplinary meetings primarily by a pulmonologist (37.7%),
an infectious diseases specialist (35.1%) or both (3.9%), or by a paediatrician (14.3%), whereas
other patients were presented by medical microbiologists, gynaecologists, otorhinolaryngologists,
ophthalmologists, neurologists and clinical pharmacists.
3.2. Paediatric Patients
Among children (Figure 2A), 7 (53.8%) had pulmonary infections or signs/symptoms, of which 2
(28.6%) concerned IPA, 3 (42.9%) concerned pulmonary complaints or an underlying disease combined
with positive fungal culture of respiratory samples of unknown significance, whereas one patient
each (14.3%) had a diagnosis of invasive pulmonary fungal infection not otherwise specified (NOS)
and chronic pulmonary aspergillosis (CPA). Systemic fungal infections were present in 3 (23.1%)
patients: disseminated candidiasis, disseminated mucormycosis or pulmonary and central nervous
system (CNS) aspergillosis were diagnosed. Furthermore, one paediatric patient each with recurrent
J. Fungi 2020,6, 274 5 of 12
vulvovaginal candidiasis, isolated CNS aspergillosis, and oropharyngeal and cutaneous candidiasis
was discussed.
Table 2.
Patient characteristics (patients discussed at the multidisciplinary meeting during the study
period).
Characteristic Value
Adults (≥18 years of age; n, %) 64 (83.1)
Children (<18 years of age; n, %) 13 (16.9)
Age at first meeting (years, median, interquartile range)
All 63.0 (37.5–69.0)
Adults (≥18 years of age) 65.0 (55.3–69.8)
Children (<18 years of age) 4.0 (2.0–15.5)
Sex (male/female; n, %) 41/36 (53.25/46.75)
Outcome at time of reporting (n, %)
Alive 64 (83.1)
Deceased 13 (16.9)
Underlying diseases (n, %)
Lung carcinoma +/−systemic treatment 8 (10.4)
Of which current 3 (3.9)
Other solid malignancy +/−systemic treatment 8 (10.4)
Of which current 4 (5.2)
Haematological malignancy +/−systemic treatment 11 (14.3)
Of which current 9 (11.7)
Pulmonary surgery (any reason) 9 (11.7)
Pneumothorax (+/−pleurodesis) 4 (5.2)
Previous pulmonary infections 27 (35.1)
Bronchiectasis 12 (15.6)
Cystic fibrosis 3 (3.9)
Primary immunodeficiency (other than CF) 8 (10.4)
Auto-immune disease 7 (9.1)
Solid organ transplantation 3 (3.9)
HIV/AIDS 1 (1.3)
Surgery at site of infection 7 (9.1)
Comorbidities (n, %)
Asthma 15 (19.5)
COPD 12 (15.6)
Diabetes mellitus 10 (13.0)
Other 51 (66.2)
None 1 (1.3%)
Immunosuppressive medication (including inhalation
corticosteroids) 22 (28.6)
Current: Diagnosis of disease or its systemic treatment <3 months before first symptoms or diagnosis of fungal
infection; COPD, chronic obstructive pulmonary disease; CF, cystic fibrosis; HIV, human immunodeficiency virus;
AIDS, acquired immunodeficiency syndrome.
3.3. Adult Patients
The majority of adult patients (Figure 2B) were diagnosed with pulmonary infections or
signs/symptoms (n =40, 62.5%). Otorhinolaryngeal infections and/or fungal oesophagitis were
present in 7 (10.9%) patients, pertaining to Aspergillus skull base osteomyelitis in 2 and Aspergillus
sinusitis/osteomyelitis, fungal sinusitis NOS, Aspergillus otomycosis with possible osteomyelitis,
Candida oesophagitis with laryngitis and possible oropharyngeal candidiasis with oesophagitis in one
patient each. Systemic infections were present in 6 patients (9.4%), with three suffering from Candida
infection (candidaemia with arthritis, candidaemia and candiduria and Candida arthritis with possibly
infected aortic vascular prosthesis) and a diagnosis of disseminated mucormycosis, disseminated
J. Fungi 2020,6, 274 6 of 12
histoplasmosis and invasive pulmonary and CNS aspergillosis in one patient each. CNS infections in
6 patients (9.4%) mostly concerned cryptococcal meningitis (5 patients). Fungal skin and soft tissue
infections were present in 3 (4.7%) patients, Aspergillus endophthalmitis in one (1.6%) and one patient
was ultimately not diagnosed with a fungal infection, but with chronic granulomatous disease and
disseminated nocardiosis.
J.Fungi2020,6,xFORPEERREVIEW6of13
recurrentvulvovaginalcandidiasis,isolatedCNSaspergillosis,andoropharyngealandcutaneous
candidiasiswasdiscussed.
(A)
(B)
Figure2.Diagnosesbyorgansystemforpaediatric(A)andadult(B)patients.RVVC,recurrent
vulvovaginalcandidiasis;CNS,centralnervoussystem.
3.3.AdultPatients
Themajorityofadultpatients(Figure2B)werediagnosedwithpulmonaryinfectionsor
signs/symptoms(n=40,62.5%).Otorhinolaryngealinfectionsand/orfungaloesophagitiswere
Figure 2.
Diagnoses by organ system for paediatric (
A
) and adult (
B
) patients. RVVC, recurrent
vulvovaginal candidiasis; CNS, central nervous system.
The majority of adult patients with pulmonary infections or signs/symptoms (Figure 3) had
a presumptive diagnosis of CPA or subacute invasive aspergillosis (SAIA) alone (19/40 patients,
47.5%). Whereas 3 patients suffered from IPA and one from allergic bronchopulmonary aspergillosis
(ABPA) alone, 8 patients appeared to have a clinical overlap between CPA and ABPA, CPA and
IPA or ABPA and IPA (Figure 3). This brought the total number of suspected CPA/SAIA patients
J. Fungi 2020,6, 274 7 of 12
to 26 and of suspected ABPA patients to 8. Furthermore, in 8 patients who displayed pulmonary
signs/symptoms, radiological abnormalities and/or suffered from underlying pulmonary diseases
without a clear mycological diagnosis, the significance of positive fungal microbiological or Aspergillus
IgG test results was discussed during the multidisciplinary meeting.
J.Fungi2020,6,xFORPEERREVIEW7of13
presentin7(10.9%)patients,pertainingtoAspergillusskullbaseosteomyelitisin2andAspergillus
sinusitis/osteomyelitis,fungalsinusitisNOS,Aspergillusotomycosiswithpossibleosteomyelitis,
Candidaoesophagitiswithlaryngitisandpossibleoropharyngealcandidiasiswithoesophagitisinone
patienteach.Systemicinfectionswerepresentin6patients(9.4%),withthreesufferingfromCandida
infection(candidaemiawitharthritis,candidaemiaandcandiduriaandCandidaarthritiswith
possiblyinfectedaorticvascularprosthesis)andadiagnosisofdisseminatedmucormycosis,
disseminatedhistoplasmosisandinvasivepulmonaryandCNSaspergillosisinonepatienteach.
CNSinfectionsin6patients(9.4%)mostlyconcernedcryptococcalmeningitis(5patients).Fungal
skinandsofttissueinfectionswerepresentin3(4.7%)patients,Aspergillusendophthalmitisinone
(1.6%)andonepatientwasultimatelynotdiagnosedwithafungalinfection,butwithchronic
granulomatousdiseaseanddisseminatednocardiosis.
Themajorityofadultpatientswithpulmonaryinfectionsorsigns/symptoms(Figure3)hada
presumptivediagnosisofCPAorsubacuteinvasiveaspergillosis(SAIA)alone(19/40patients,
47.5%).Whereas3patientssufferedfromIPAandonefromallergicbronchopulmonaryaspergillosis
(ABPA)alone,8patientsappearedtohaveaclinicaloverlapbetweenCPAandABPA,CPAandIPA
orABPAandIPA(Figure3).ThisbroughtthetotalnumberofsuspectedCPA/SAIApatientsto26
andofsuspectedABPApatientsto8.Furthermore,in8patientswhodisplayedpulmonary
signs/symptoms,radiologicalabnormalitiesand/orsufferedfromunderlyingpulmonarydiseases
withoutaclearmycologicaldiagnosis,thesignificanceofpositivefungalmicrobiologicalor
AspergillusIgGtestresultswasdiscussedduringthemultidisciplinarymeeting.
Figure3.Pulmonaryinfectionsorsigns/symptomsinadults.Datarepresentthepresumptive
diagnosisatthetimeofconsultation,beforeretrospectiveapplicationofESCMID/ERSandISHAM
diagnosticcriteriaforthediagnosisofCPA,andABPA,respectively.IPA,invasivepulmonary
aspergillosis;CPA,chronicpulmonaryaspergillosis;SAIA,subacuteinvasiveaspergillosis;ABPA,
allergicbronchopulmonaryaspergillosis;ESCMID/ERS,EuropeanSocietyofClinicalMicrobiology
andInfectiousDiseases/EuropeanRespiratorySociety;ISHAM,InternationalSocietyforHuman&
AnimalMycology.
Figure 3.
Pulmonary infections or signs/symptoms in adults. Data represent the presumptive
diagnosis at the time of consultation, before retrospective application of ESCMID/ERS and ISHAM
diagnostic criteria for the diagnosis of CPA, and ABPA, respectively. IPA, invasive pulmonary
aspergillosis; CPA, chronic pulmonary aspergillosis; SAIA, subacute invasive aspergillosis; ABPA,
allergic bronchopulmonary aspergillosis; ESCMID/ERS, European Society of Clinical Microbiology
and Infectious Diseases/European Respiratory Society; ISHAM, International Society for Human &
Animal Mycology.
3.4. Chronic Pulmonary Aspergillosis and Allergic Bronchopulmonary Aspergillosis
Diagnostic criteria for CPA according to the European Society of Clinical Microbiology and
Infectious Diseases/European Respiratory Society (ESCMID/ERS) guidelines [
18
] and diagnostic
criteria for ABPA according to the International Society for Human & Animal Mycology (ISHAM)
guidelines [
19
] were retrospectively applied to the 28 patients with a presumptive diagnosis of CPA,
ABPA, or both. Ultimately, 21 of these patients (75%) fulfilled the criteria for CPA and 7 (25%) fulfilled
those for ABPA (one of which was not clinically suspected of ABPA, but of CPA), whereas 4 (14.3%)
fulfilled criteria for neither diagnosis. More specifically, 15/28 (53.6%) fulfilled the criteria for CPA alone,
4 (14.3%) fulfilled criteria for both CPA and ABPA and 2 (7.1%) fulfilled those for CPA but were
provided with insufficient data to apply ABPA criteria. Concerning ABPA, 2 (7.1%) patients could be
classified as ABPA alone, and one (3.6%) as suffering from SAIA and ABPA. Of the 4 patients who
did not meet CPA and/or ABPA diagnostic criteria, one (3.6%) was diagnosed with SAIA. The most
commonly observed CPA subtype in patients fulfilling the ESCMID/ERS diagnostic criteria was chronic
cavitating or chronic fibrosing CPA (with or without any of the other subtypes), affecting 14/21 (66.7%),
whereas 5 (23.8%) suffered from Aspergillus noduli and one (4.8%) had a simple aspergilloma. CPA in
2 patients (9.5%) could not be categorized into a subtype.
The most common underlying diseases and comorbidities among the 21 patients with CPA
according to the ESCMID/ERS diagnostic criteria were previous (probable) pulmonary infections
in 12 (57.1%), asthma in 8 (38.1%), pulmonary surgery for any reason in 7 (33.3%), COPD in 5
(23.8%), bronchiectasis in 4 (19.0%), lung carcinoma with or without systemic treatment in 3 (14.3%)
J. Fungi 2020,6, 274 8 of 12
and pneumothorax with or without pleurodesis in 3 (14.3%). Furthermore, 7 patients (33.3%) used
immunosuppressive medication (including inhaled corticosteroids), 2 suffered from sarcoidosis (9.5%),
2 (9.5%) suffered from an autoimmune disease and 2 (9.5%) had a primary immune deficiency other
than cystic fibrosis (CF). One patient (4.8%) had suffered from pulmonary TBC, whereas another one
had a single sputum sample positive for auramine staining and TBC PCR at the time of diagnosis,
which became negative a day later (possibly reflecting contamination). None of the patients had a
history of non-tuberculous mycobacterial (NTM) infection.
3.5. Fungal Microorganisms
A fungal pathogen was demonstrated by culture or PCR in 63/77 patients (81.8%). Among these,
a single fungal pathogen was demonstrated in 50 (79.4%), whereas multiple pathogens were
demonstrated in 13 (20.6%). The vast majority of these microorganisms concerned Aspergillus
species (in 42 patients: a single species in 37 and two species in 5). Candida species were isolated in
9 patients (a single species in 6 and two species in 3), Cryptococcus neoformans was demonstrated in 6
and Mucorales were demonstrated in 4 patients (Figure 4).
J.Fungi2020,6,xFORPEERREVIEW9of13
Figure4.Fungalmicroorganisms,demonstratedbycultureand/orPCR.Penicilliumspp.andthe
basidiomyceteNOSwerenotregardedasthecausativemicroorganisminthepatientsinvolved.NOS,
nototherwisespecified.
DistributionofAspergillusspecieswasasfollows:A.fumigatusin28/42(66.7%),A.nigerin4
(9.5%),A.flavusin3(7.1%),A.nidulansin2(4.8%),A.terreusin2(4.8%),A.glaucusgroupinone(2.4%)
andAspergillusNOSin8(19.1%).InformationonvoriconazolesusceptibilityofA.fumigatusisolates
obtainedatanytimeduringthediseasecoursewasavailablefor25/28patientsinwhichthisfungal
pathogenwasdemonstrated.Voriconazole‐resistantAspergillus(minimuminhibitoryconcentration
of≥2mg/L)waspresentinatleastoneisolatein10/25(40%)ofpatientstested.Mostcommonly
involvedCandidaspecieswereC.albicans(in6/9patients;66.7%)andC.krusei(3patients;33.3%),with
C.glabrata,C.tropicalisandC.dubliniensisbeingdemonstratedinonepatienteach(11.1%).Lastly,in
2(50%)patientssufferingfromMucoralesinfection,Lichtheimiacorymbiferawasdemonstratedand
Rhizomucorpussiluswasdemonstratedintheother2.
3.6.AntifungalTreatment
Antifungaltreatmenthadalreadybeenadministeredto56patients(72.7%)atthetimeoffirst
consultation(includingthe12patientswithfirstconsultationbefore01‐07‐2017),and47patients
(61%)werestillonantifungaltreatment.Recommendationsregardingmodificationofantifungal
treatmentweregivenin44patients(57.1%).Thisadvicepertainedtoswitchingantifungaltreatment
regimen(17patients,38.6%),startingantifungaltreatment(13patients,29.5%),adding(5patients,
11.4%)orremoving(2patients,4.5%)antifungaldrugstothetreatmentregimen,stoppingantifungals
(6patients,13.6%),andinonepatient(2.3%)switchingantifungalregimenandaddinganantifungal
drugatalatertimepoint.
4.Discussion
Ourdatarepresentanoverviewoftheclinicalcasespresentedatthemultidisciplinarymycology
meetingsduringa12months’periodinourCenterofExpertiseinMycologyintheNetherlands.
Figure 4.
Fungal microorganisms, demonstrated by culture and/or PCR. Penicillium spp. and the
basidiomycete NOS were not regarded as the causative microorganism in the patients involved. NOS,
not otherwise specified.
Distribution of Aspergillus species was as follows: A. fumigatus in 28/42 (66.7%), A. niger in 4
(9.5%), A. flavus in 3 (7.1%), A. nidulans in 2 (4.8%), A. terreus in 2 (4.8%), A. glaucus group in one (2.4%)
and Aspergillus NOS in 8 (19.1%). Information on voriconazole susceptibility of A. fumigatus isolates
obtained at any time during the disease course was available for 25/28 patients in which this fungal
pathogen was demonstrated. Voriconazole-resistant Aspergillus (minimum inhibitory concentration of
≥
2 mg/L) was present in at least one isolate in 10/25 (40%) of patients tested. Most commonly involved
Candida species were C. albicans (in 6/9 patients; 66.7%) and C. krusei (3 patients; 33.3%), with C. glabrata,
C. tropicalis and C. dubliniensis being demonstrated in one patient each (11.1%). Lastly, in 2 (50%)
J. Fungi 2020,6, 274 9 of 12
patients suffering from Mucorales infection, Lichtheimia corymbifera was demonstrated and Rhizomucor
pussilus was demonstrated in the other 2.
3.6. Antifungal Treatment
Antifungal treatment had already been administered to 56 patients (72.7%) at the time of first
consultation (including the 12 patients with first consultation before 01-07-2017), and 47 patients (61%)
were still on antifungal treatment. Recommendations regarding modification of antifungal treatment
were given in 44 patients (57.1%). This advice pertained to switching antifungal treatment regimen
(17 patients, 38.6%), starting antifungal treatment (13 patients, 29.5%), adding (5 patients, 11.4%) or
removing (2 patients, 4.5%) antifungal drugs to the treatment regimen, stopping antifungals (6 patients,
13.6%), and in one patient (2.3%) switching antifungal regimen and adding an antifungal drug at a
later time point.
4. Discussion
Our data represent an overview of the clinical cases presented at the multidisciplinary mycology
meetings during a 12 months’ period in our Center of Expertise in Mycology in the Netherlands.
During this period, 114 consultations were performed for 77 patients with fungal infections, most of
whom were adults with a past medical history. The majority of both adult and paediatric patients
discussed suffered from pulmonary infections or signs/symptoms (53.8%, and 62.5%, respectively).
In the majority of cases, consultation had an (potential) impact on patients’ treatment.
Interestingly, more than half of adult patients with pulmonary infections or signs/symptoms had
a presumptive clinical diagnosis of CPA or SAIA, CPA combined with IPA or CPA combined with
ABPA. Initial presumptive diagnosis demonstrated relatively good agreement with formal diagnostic
criteria (21/26 suspected patients fulfilled the ESCMID/ERS diagnostic criteria). The finding that most
confirmed CPA patients suffer from the CCPA or CFPA subtype is in line with previous studies [
20
].
The high number of CPA patients discussed at the mycology meetings might be due to several factors.
First, it may reflect an until recently under-recognized prevalence of this chronic infection [
2
]. Second,
it may represent selection bias in our patient population: physicians will only discuss patients in
the meetings when diagnosis, treatment and/or follow-up are problematic or when they have little
or no experience with a disease entity. Awareness among clinicians regarding CPA may still be low.
On the other hand, diagnosis of CPA may be difficult, especially considering the unfamiliarity of many
clinicians with Aspergillus serological tests, a key parameter in CPA diagnosis, and the requirement of
excluding alternative diagnoses. Furthermore, optimal treatment strategies and commonly accepted
treatment endpoints for this disease still warrant further research, even though clinical guidelines have
been published [18,21].
Underlying diseases/comorbidities in our CPA patient population are largely in agreement with
those described in a large UK study [
20
], but differ from those observed in a recent study from Spain [
22
].
However, the most notable differences pertain to the presence of (previous) pulmonary TBC (4.8%
in our study versus 16.7% in the UK and 18.9% in the Spanish study) and NTM infections (0 versus
14.3% and 0%, respectively) as an underlying disease. Since our hospital also hosts a centre of expertise
in mycobacterial infections with its own multidisciplinary meeting, consultations for patients with
mycobacterial disease might not have taken place at our mycology meetings, possibly introducing a
selection bias in our patient cohort.
The relative paucity of IPA patients discussed might reflect a better acquaintance of physicians
with this manifestation of pulmonary aspergillosis and the availability of well-established international
and national (Dutch) treatment guidelines [
21
,
23
,
24
]. Furthermore, for high-risk specialties such as
haematology and intensive care medicine, local treatment protocols and frequent standard consultation
rounds with medical microbiologists/mycologists are in place, reducing the need for consultations at
the multidisciplinary meeting. Similar reasons might apply to the relatively low number of patients
discussed with Candida infections, despite this yeast constituting the fourth most common cause
J. Fungi 2020,6, 274 10 of 12
of hospital-acquired bloodstream infections in the USA [
25
]: mostly, cases discussed pertained to
recurrent, persisting or disseminated infections, or atypical or complex presentations.
Further indications of the complexity or atypical nature of cases discussed are the finding that
multiple aspects of care were discussed in 83.1% of cases and that host factor criteria for probable IFD,
according to the revised European Organization for Research and Treatment of Cancer and the Mycoses
Study Group Education and Research Consortium (EORTC/MSGERC) definitions [
26
] were present
in relatively few patients. However, not all fungal infections encountered are considered invasive;
allogeneic stem cell transplantation in 1.3%, immunosuppressive medication (including inhalation
corticosteroids) in 28.6% and primary immunodeficiency in 10.4%; a history of recent neutropenia
could not be evaluated in our cohort. The issue that EORTC/MSGERC criteria are not always applicable
in all patients has been reported before [
27
,
28
] and in these cases, a multidisciplinary meeting could
aid in establishing a diagnosis.
The finding that 23.1% of all paediatric and 12.5% of all adult patients discussed concerned those
with respiratory signs/symptoms or an underlying disease with positive microbiological test results of
unknown significance stresses the need for better diagnostic tools that help differentiate fungal disease
from colonization.
The observation that 40% of patients with demonstrated A. fumigatus harboured a
voriconazole-resistant isolate at any one time during their disease course is remarkable in light
of the 10.5% of culture-positive patients with triazole-resistant isolates described in recent Dutch
national surveillance data, attesting to the complexity of the patient population involved [29].
Inherent to the setup of the multidisciplinary meeting, our study does not represent a
comprehensive epidemiological overview of fungal infections in the Netherlands, such as recently
published [
30
]. Instead, it highlights the real-life difficulties encountered in daily clinical practice by a
diverse array of medical specialties caring for patients with (I)FDs, revealing which questions and
unmet medical needs warrant further research most pressingly in a developed country.
By combining complementary expertise, employing a structured approach and providing
comprehensive advice on diagnostic work-up and antifungal treatment, the multidisciplinary mycology
meeting can have a significant impact on healthcare for patients with (I)FDs. The method of
practice-based registration improves the quality of consultation and provides a platform for training and
education. Furthermore, obtaining experience in (I)FDs facilitates development of expert opinion-based
approaches to diagnosis and treatment, potentially serving as a rationale for future clinical trials.
5. Conclusions
In conclusion, a multidisciplinary mycology meeting proves to be a useful modality to address
complex, rare and/or atypical (I)FDs. By providing an (inter)national consultation service and thus
concentrating specialized mycological care, clinical experience can be gained by the members of
the multidisciplinary team in fungal diseases normally rarely encountered by a single healthcare
professional. Furthermore, it may reveal unmet needs regarding diseases previously thought to be
rare or those relatively unknown to clinicians, as is the case with CPA in our cohort, thus providing
information on which disease entities require more awareness and which clinical issues and needs
should be prioritized in further research efforts in a national or regional context.
Author Contributions:
Conceptualization, R.J.M.B., P.E.V. and F.L.v.d.V.; formal analysis, N.A.F.J.; Investigation,
N.A.F.J.; resources, N.A.F.J., R.J.M.B., M.H.R., S.S.V.H., J.t.O., Q.d.M., Y.B., E.A.d.K., B.J.K., M.G.N., J.B.B.,
J.C.R.-L., J.F.M., P.E.V. and F.L.v.d.V.; supervision, R.J.M.B., P.E.V. and F.L.v.d.V.; writing—original draft, N.A.F.J.;
writing—review and editing, R.J.M.B., M.H.R., S.S.V.H., J.t.O., Q.d.M., Y.B., E.A.d.K., B.J.K., M.G.N., J.B.B.,
J.C.R.-L., D.B., E.W.M., J.F.M., P.E.V. and F.L.v.d.V. All authors have read and agreed to the published version of
the manuscript.
Funding:
This research received no external funding. Mihai G. Netea was supported by an European Research
Council Advanced Grant (#833247) and a Spinoza Grant of the Netherlands Association for Scientific Research.
Frank L. van de Veerdonk was supported by a Vidi grant of the Netherlands Association for Scientific Research.
J. Fungi 2020,6, 274 11 of 12
Conflicts of Interest:
Roger J.M. Brüggemann, No conflict of interest with regards to this work. Outside of this
work, he has served as consultant to and has received unrestricted research grants from Astellas Pharma Inc.,
F2G, Amplyx, Gilead Sciences, Merck Sharpe and Dohme Corp., and Pfizer Inc.; Mihai G. Netea, No conflict of
interest with regards to this work. Outside of this work, he is the scientific founder of Trained Therapeutix and
Discovery; Paul E. Verweij, No conflict of interest with regards to this work. Outside of this work, he has received
grants from Mundipharma, F2G, Pfizer Inc., Thermofisher, Gilead Sciences and Cidara, he received non-financial
support from IMMY; The other authors report no conflicts of interest.
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