We propose a protocol to construct the 35 $f$-controlled phase gates of a
three-qubit refined Deutsch-Jozsa (DJ) algorithm, by using single-qubit
$\sigma_z$ gates, two-qubit controlled phase gates, and two-target-qubit
controlled phase gates. Using this protocol, we discuss how to implement the
three-qubit refined DJ algorithm with superconducting transmon qutrits
resonantly coupled to a single cavity. Our numerical calculation shows that
implementation of this quantum algorithm is feasible within the present circuit
QED technique. The experimental realization of this algorithm would be an
important step toward more complex quantum computation in circuit QED.