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Assalaam O Alaikum
I was sensing it earlier, and my collegue also pointed this out day before, but yesterday I found it hard proof. Do not trust ChatGPT for citing and delegating your LR, except for areas in which you are new and need a bird eye view. See following post that I did on LinkedIn for what happened.
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There are three significant dangers that could result from generative AI, the first being the creation of killer biological viruses...
Second, bad actors can use generative AI tools to create and target misinformation...
Generative AI can be dangerous when its decision-making is faster than humans, particularly in critical situations...
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Bird coffee was promoted in Africa? What was the relevance of promoting it
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I think you mean 'Bird Friendly Coffee' ? - also known as shade grown coffee- various benefits for the environment and the trees which impact positively on the birds. See https://birdandwild.co.uk/pages/what-is-bird-friendly-coffee , https://www.forbes.com/sites/grrlscientist/2021/03/06/bird-friendly-coffees-really-are-for-the-birds/?sh=440af8586663 etc
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fish servers as intermediate host and birds as definite hosts to these parasites.
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The Universal Primers for the Identification of Trematodes are: Atlas of Helminth, Identification keys and Morphological features.
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Is there a chemical product that will kill rats without causing secondary poisoning to birds or to humans?
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Chlorophacinone is an anticoagulant used as a rodenticide. It is classified as an extremely hazardous substance in the United States as defined in Section 302 of the U.S. Emergency Planning and Community Right-to-Know Act (42 U.S.C. 11002) and is subject to strict reporting requirements by facilities which produce, store, or use it in significant quantities.
I need safety product
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When rever what is waterbird the obvious answer always said that waterbird is a type of bird that lives and depend their live around body of water. But is it just that? Does waterbird itself has special taxonomy like subclass or other? or is it classify by only their morphology?
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You can have any classification you like if it makes sense to you :)
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My intention is to make visible part of the most important specimens deposited in the Colección Zoológica Dr. Eustorgio Méndez in Panama City.
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Thank you very much for the contributions Justis Henault Lawrence D. Igl James Des Lauriers , most of this platforms I did not know about.
all the best,
Angel
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I’m a field biologist working on social evolution. I want to switch from micro-satellites to SNPs to determine kinship and sex of individuals (I'm working on a corvid bird). Does anybody know which commercial companies that can do Dartseq for the SNP discovery step and the subsequent SNP typing (e.g. with DD-RAD methods or similar) in Europe or North America? And, what would the first step and the second step cost for 3000 individuals?
Thanks a lot!
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As someone that gets given data for similar studies (fingerprinting clonal crops) from lots of different providers I think it's best to just reach out to the companies for quotes.
DArT's new technology DArTag seems to be very popular right now rather than DArTseq.
LGC is offering FlexSeq, CaptureSeq and SNPseq (disappearing soon, but the technology is also offered as Allegro by Tecan if you look up SPET). FlexSeq may actually be the best for you since you will be able to construct haplotypes that then could be more powerful than microsats. LGC also offer KASP assays if you just want SNPs (if you bring this in house and use PACE it can be very cheap). LGC also have European and US centers whereas I'm not sure if DArT have centers exclusively in Australia (I doubt it considering the amount of studies using that platform).
Good luck! Happy to give more details if needed
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Hello everyone,
When it comes to using a protopatagial tag in birds, I wonder if it is essential to tag both wings to retain birds‘ "balance", or if one tag is alright. While browsing papers, I could come across both alternatives, individuals carrying only one protopatagial tag or birds with both wings marked. Thank you for sharing your experience and clarification.
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Protopatagial tags are small, lightweight tags that are attached to the primary feathers (also known as flight feathers) of birds' wings. These tags are used for identification and tracking purposes, and are commonly used in research studies on bird migration and behavior.
It is generally recommended to tag both wings of a bird with protopatagial tags in order to maintain the bird's balance and ensure that it can fly properly. This is because the primary feathers on both wings work together to provide lift and propulsion during flight, and attaching a tag to only one wing could potentially disrupt this balance.
However, it is possible that some birds may be able to fly normally with a single protopatagial tag, depending on factors such as the size and weight of the tag, the species of bird, and the individual bird's body size and wing shape. Some studies have found that attaching a protopatagial tag to just one wing has minimal or no impact on a bird's flight ability, while other studies have reported that attaching a tag to one wing can cause a slight reduction in flight performance.
Ultimately, the decision to tag one or both wings with protopatagial tags will depend on the specific research goals of the study, as well as the potential impacts on the birds' behavior and welfare. It is important to carefully consider these factors and follow any guidelines or regulations that may be in place for tagging birds.
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Dear Community,
I’m searching for a researcher / research group who is working on behavioural tests – colour discrimination in birds of prey. I would be very grateful for advice and hints! Best, Dominique
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This is great, thank you Jasleen Kaur Jolly
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I would like to know the equation that shows the relationship between the flight speed of a bird and its wingspan.
Thanks
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This question can probably only be asked for a narrower taxonomic unit (genus, maybe maybe family). Otherwise it's really too dependent on the taxon, because wing shape, body shape/size, and flight style all affect speed and don't correlate well with wingspan across all species. Longer wings create more lift, but how much of the lift is used to go up versus forward? Depends on the bird. Also wider wings will create more drag. A bird with the same wings can flap them with higher frequency and reach higher velocity. And so on.
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For example I have an cellulase solution of 3.50 iu/ml. And I need to adjust to a concentration of 100, 250 or 500 iu/ bird/ to feed my experimental poutry bird. How do I calculate this pls
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Hi, that's simple.
If you need 100 IU/bird and have 3.5 IU/ml, you need 100/3.5 = 28,6 ml/bird. The same way for the others of course.
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Birds like Himalayan & Tibetan snowcocks, Tibetan partridges, and Tibetan sandgrouse (comparatively larger birds) are considered good indicators of ecosystem health, particularly regarding Ladakh and the Indian trans-Himalaya. Any publications you could recommend to me or comments you have on this would be greatly appreciated.
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Do wood mice attack birds in hollows or artificial nests? For example, the mouse Sylvaemus tauricus attacks birds?
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The mice can attack bird eggs :)
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It is a known fact that ticks can migrate to other continents by parasitizing on the body surface of migratory birds. There are some specific influencing factors that affect this, and I would like to know the interrelationship between them.
Thanks
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Dear, Amowie Aimienoho
Thank you very much for your reply.
The factors you described gave me a lot of help and direction. I want to ask you a question, Will the flight ability of migratory birds not be reduced by the blood-sucking of ticks? Please let me know if you have any thoughts or data on this.
Best
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I would like to extract coding sequences of bird genomes. I am not an ornithologist. So, I would like to know about any resource which tells us the details of all annotated bird genomes.
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Looks like NCBI could be the easiest resource to use. Go to webpage https://www.ncbi.nlm.nih.gov/data-hub/genome/?taxon=8782
Taxon 8782 is the ID for birds. You can add filters to narrow down to only the annotated genomes.
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I'm planning to explore the avian seed dispersal and needed help in planning the research. I'm stuck with collection of bird feces from the floor (paved and unpaved) and the equipments required to collect the sample. Additionally, what is the maximum time limit to collect the poop sample after the roosting period to avoid collecting dry samples?
Note: I'm not considering to use mist nets to capture birds. I'm only focussing on collection of feces available directly on the ground.
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Thank you for your suggestions. I'm planning to divide my study site in 4 quadrants and set up 2 collection trays under 3 (minimum) trees to collect feces of birds.
However, I would like to know the minimum time required to keep the sample trays under the trees. Should I set up the trays a day before and collect the samples next day after morning roosting time. Complementary to it, I'm also going to take line transect approach to collect bird feces from the ground. Kindly let me know the best approach to collect the samples and how ro collect in a bedt manner to avoid contamination. Should the collected samples be fresh while collecting them!
Looking forward to the suggestions.
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Is there any equation to calculate the number of animal needed for the study?
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use the power of test on SAS or use Gpower it is much more simpler than SAS. you should know the expected change due to treatment and the desired power to use gpwer
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Hi everyone
I am looking for gape sizes of the following species. I would be grateful if you have data or references that specifically mention these species (I am not tlooking for references to general papers on gape size).
Auriparus flaviceps (Verdin)
Brotogeris versicolorus (White-winged Parakeet)
Onychognathus tristramii (Tristram's grackle)
Psittacara holochlorus (Green Parakeet)
Psittacula krameri (Rose-ringed Parakeet)
Pycnonotus cafer (Red-vented Bulbul)
Pycnonotus jocosus (Red-whiskered Bulbul)
Pycnonotus xanthopygos (White-spectacled Bulbul)
Rousettus aegyptiacus (Egyptian Fruit bat )
Setophaga coronata (Yellow-rumped Warbler)
Sialia currocoides (Mountain Bluebird)
Any help is much appreciated
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Have you checked the public trait database AVONET?
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Hi all,
I am trying to import fastq.gz files in qiime2, but the following error appears:
There was a problem importing /home/manuel_os/bird:
Missing one or more files for CasavaOneEightSingleLanePerSampleDirFmt: '.+_.+_L[0-9][0-9][0-9]_R[12]_001\\.fastq\\.gz'
I am using the following code:
qiime tools import --type 'SampleData[PairedEndSequencesWithQuality]' --input-path /home/manuel_os/bird --input-format CasavaOneEightSingleLanePerSampleDirFmt --output-path demux-single-end.qza
Any help will be deeply appreciated, thanks a lot!
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I will do it Luigimaria Borruso , thanks for the advice :)!
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Human activities have greatly changed the natural environment since the Industrial Revolution. Have migratory birds changed their migration routes? Why can migratory birds do this?
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Which software do you recommend for analyzing computed tomography images?
The project is about bird brains so it involves measurements and anatomical reconstructions. I have heard about Avizo, Mimics and SlicerMorph. Which do you suggest and why?
Thank you all in advance.
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I personally prefer 3D Slicer, and I think it provides extensions for the software you mentioned above.
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HI! There is some evidence that the Cackling Geese in an urban lake are consuming small (less than 5cm) fish. Has anyone heard of these birds eating non-vegetative items? I can't find publications that substantiate anything but plants in their diet. Thanks in advance for any leads/observations you might have!
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Kindly see also the following useful RG link:
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The popular IRES from HCV or EMCV was used in quite a few plasmid. I am wondering any one try them in fish or bird?
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Yes it works, because fish belong eukaryotes. IRES has role in translation process.
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Dear Research Gate community,
I’m conducting a study on how different management practices in wetland (ponds) affects the diversity and abundance of species in the wetlands. The different ponds are next to each other. Some ponds are control without any management practices. The water in the treatment ponds is regularly drawn down and filled up again with water from the river. We recorded the waterbird species number and abundance of each pond regularly (record the bird data of all the ponds at the same time for each survey).
- In the first year, we conducted a baseline study in which no treatment was done for all the ponds (data were collected monthly).
- In the second year, we conducted the treatment (operational study), and data of birds were collected weekly.
We’re now trying to study:
1) first, if there is any difference between the treatment ponds and control ponds during the operation
2) if there is any difference between baseline study and operational study of the same pond.
We wonder what kind of statistics are suitable for statistically analysing our data.
Some problems we are encountering is:
1. The data do look like normally distributed. The data collected are time series data, there are natural seasonal variation in the number of waterbirds in our region (a lot of migratory birds in fall and winter). How to take into account of influence of the time of survey.
2. The sample frequency for baseline year (12 times) and operational year is different (52 times), how to compare the difference between baseline and operational year.
Highly appreciate any help or suggestion!
Best regards
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Try to check a book on: Design and Analysis of Experiments, just be sure that you are doing the right design. Regards.
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Hello,
I am fitting Generalized Mixed Models using a logistic-exposure link function (which accounts for exposure periods) to model birds nest survival (i.e., probability of surviving a certain time interval).
I need to compute Marginal and Conditional R^2 for the models. However, I am struggling to find an R function to compute these given this specific link function. Particularly, I used the r.squaredGLMM() [MuMin package] and the rsquared() [piecewiseSEM package] functions, which both return errors, "Error in r.squaredGLMM.merMod(m11) :
do not know how to calculate variance for binomial(“logexp(carpint$Exposure)”)" and "Error in make.link(link) : ‘logexp(carpint$Exposure)’ link not recognised", respectively.
Model:
m11 <- glmer(Surv~Volume + (1|nest)+(1|season),
family=binomial(logexp(exposure = carpint$Exposure)),
data=carpint)
Any help is appreciated!
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Dear RG community members,
I hope you are well and helthy and ready for small discussion. My question is, can we efficiently increase the population of wetfowls in wetland areas by constracting and using artificial nests suitable for specific taxa? If you also have any reference on that issue, I would be grateful.
Thank you.
Zlatko
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One of these strategies is installing artificial nests adjacent to urban gardens and agricultural farms. Nest boxes are among the artificial nests used by gardeners and farmers to attract pollinators.
Ionescu, D. T., Hodor, C. V., & Petritan, I. C. (2020). Artificial wetlands as breeding habitats for colonial waterbirds within Central Romania. Diversity, 12(10), 371.
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I'm interested in estimating how much time do birds (independent of their taxonomic group) spend in contact with soil, particularly on heathland ecosystems. I would use this information as a proxy to assess whether birds would be more or less likely to pick up (either accidental or active -phoresy-) non-parasitic soil arthropods in comparison to other groups (e.g. rodents, herpetofauna, etc.). This approach is at an exploratory stage, so depending on how detailed is this information -if available-, I will decide if it makes sense to use it or not.
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If you are basing your estimation of the time the birds in question are spending in contact with soil on observations using a unit of time that fits your needs/options for observation seems reasonable. Take your whole observation time and subdivide into intervals of equal length documenting all behaviors relevant for your research topic for each interval. You should define different behaviors if you want to document them before the observation (for example by an initial observation phase used to catalogue behaviors).
My (limited) experience is that e.g. in 30 second intervals multiple types of behavior can occur (for example a duck can walk to the edge of pond climb down a little incline to get into the water and start to swim), so very long intervals might not result in accurate documentation of behaviors. But much of this depends on your set up (are you just interested in being in contact with soil or not, or do you want to be able to distinguish between different interactions with the soil, like scratch digging, walking, feeding on soil arthropods etc.; how long will observation be etc.).
Alternatively instead of doing observations yourself you can try to check if there is sufficient literature on the behavior of relevant bird species (documenting time budgets with behaviors useful to address your questions) in the type of ecosystem you are interested in.
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Dear Researchers
Kindly suggest me the potent chemicals, which can be used in depredatory bird management in horticultural and agricultural crops
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Because of the limited market, quinone's use in bird control could be terminated by these requirements. Strychnine - This chemical is currently used to kill pest bird species in urban and agricultural areas which was a medicinal plant alkaloid obtain from Strychinus nuxvomica and not harmful to nature.
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I have two species of birds, for each species I measured 4 replicates of an enzyme for each individual. When I ran the tests for normality it came out that my data are not normally distributed so I cannot use the repeated measures ANOVA to test for differences between species. Transformations didn't work for my data. Which non parametric test should I use?
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Thank you!
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Is there a tried and true technique for collecting pollen from bird feathers for metabarcoding purposes? I have been told by a very reliable source that fuchsine gel will not work, and tape seems troublesome; both for metabarcoding, and for partnerships with banding stations that I hope to implement. I am hoping to test out different swab types in the next few days (namely foam and flocked), but perhaps someone here has a better idea or has tried a given technique successfully?
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You can wrap the body in cotton wool forfive minutes and the pollen will stick inside
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I am currently working on a project that aims to characterise in R on a pool of 500 bird species the traits that may be at the origin of their introduction outside their natural habitat and thus allowing them to become invasive or not.
Thus, out of my pool of 500 species, I ended up with 150 bird species that were introduced elsewhere (introduction = 1) versus 350 others that were not introduced (introduction = 0), with approximately 80 life history traits for each of them.
My idea was therefore to use PGLS (linear models correcting for the phylogenetic effect of species on their traits) on my pool of 500 species and see which traits could explain the "introduction" variable.
The problem is that by doing this my results are biased by the presence of many more non-introduced birds than introduced birds. My initial idea was to use bootstrapping to resample my n=350 birds to n=150 and run my PGLS on this new pool of 300 species (n=150 introduced and n=150 unintroduced), repeat it and then do some model averaging.
However by doing this my final models obtained in this way are completely different at each of my R sessions. I have tried increasing the number of bootstrap runs to 10,000 but this does not solve the problem. When I do this with basic GLMs I do not encounter this problem of non-repeatability.
Would you have a solution to solve this problem of repeatability with the PGLS in my process?
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I would approach this with logistic regression which I assume is what you did . After encountering your problem, I would guess that you might have rare cases. If so I would suggest Firth regression a modification that deals with this problem. Google Firth regression for full details.
Best wishes David Booth
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Hello,
I want to extract testosterone from plasma samples, but I don't have diethyl ether, as generally recommended for ELISA assay. Thus I am looking for an alternative and considering other organic solvents Methanol, Dichloromethane or Ethanol. I used Dichloromethane to extract corticosterone but I'm not sure that testosterone would have the same affinity as dichloromethane. My aim is to compare circulating testosterone levels between individuals.
Thank you in advance
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Thank you
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Dear colleagues
I am looking for recommendations for assessment of diet selectivity of a fish-eating bird.
I have data on relative numbers and weight, as well as sizes, of prey species estimated from bird diet samples. I also have results from gill-net monitoring fisheries (length, weight and number of fish) from the same area.
For a beginner in this field (i.e. me), what would be a straightforward way to start looking at the diet selectivity of the birds?
Are there indices that look at selectivity of both species size distribution?
Kind regards,
Karl
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Having been a fish farmer (Rainbow Trout), my recommended diet for fish-eating birds is buckshot.
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Does vegetation structure (e.g. tree raminification pattern) affect bird nesting activity and nest abundance? Could you please recommend studies related to this topic? Thanks
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Thank you very much for the recommendations. In Moudrý et al. it is interesting to note that vegetation heterogeneity was strongly related to bird species richness, also that dead trees also provided shelters for nesting birds. Those were however somehow limited to the ground nesting/foraging species as the authors mentioned. How about tree-nesting species?
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Greetings to all those interested and eager to help.
In short: During 12 breeding seasons, my colleagues and I researched the nesting of one bird species on an area of ​​about 11,000 hectares. We spent the first two years looking exclusively for territories/nests. We recorded a total of 34 different territories/nests. For the next ten years, we had in mind to monitor the reproductive parameters (laying dates, number of eggs, number of offspring, etc.) for all 34 territorial pairs found. However, due to the vast study area, hard mountain relief, bad weather conditions and lack of time in general, we did not visit every territorial pair every year (we did it completely randomly). So, in some years, we followed the nesting parameters in only five territories, while in others, we managed to monitor up to 20 territories and collect reproductive data. For each year collected data table contained: year, number of controlled nests, number of nests with incubation, number of successful pairs, number of fledglings, productivity and nesting success. We defined productivity as the number of fledged juveniles divided by the number of successful nesting attempts. Nesting success was defined as the number of fledged juveniles divided by the total number of nesting attempts during one calendar year. My question is whether it is possible and in what way (statistical modelling, simple formula, etc.) to express the population trend for the entire monitored population with the help of partially collected reproductive data? So is it possible to project a ten-year overall population trend based on annual productivity and nesting performance data?
Thanks in advance for the comments, suggestions and literature.
Sincerely yours,
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This is exactly why statisticians suggest you know your overall question before you collect data. Good luck, David Booth
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If you calculate the coefficients of diversity, how correct the indicators will be. There are 6 research sites, almost the same species of birds are found on each of them???
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Hello Olena; What is the objective of the project? Knowing that would make for more helpful suggestions. One methodological problem comes to mind. The similarity might simply be due to having the plots too close together, or in the same habitat type. Best regards, Jim Des Lauriers
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Hello,
I would like to measure provisioning rates in Eurasian Blue tits. My plan is to color ring them, so that I can distinguish between male and female.
In my system they breed in nest boxes, however I do not have the possibility to place a camera within a nest box. PIT tags are also not an option for me. Visual surveys can have problems because If the bird does not land on the nest box hole, then it would be impossible to know if it was a male or female.
I need a camera that could film at least 6h (with batteries). I plan to film at least 30 nests and to move the cameras around, so I may need about 12 cameras.
Of course I have a quality vs quantity vs cost trade off.
Somebody suggested using a security camera, but the problem is that there is no screen to see what you are filming and no WIFI for me to connect the camera to my phone in the field.
Others have suggested camcorders, but their models are no longer being sold and they can get pretty expensive.
Any technical suggestions will be super helpful.
Sincerely,
Chase
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Might be of help. See hegners (1982) work too.
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Currently, my research object is crested lark Galerida cristata. I need to obtain measurements from adult birds, but they are difficult to catch. Standard catching methods such as ornithological mist nets or spring traps are not effective enough. Could someone recommend other methods of catching not only Galerida cristata, but generally birds species from Alaudidae larks?
I will be very grateful for any suggestions or advice you can provide.
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Andrew Paul McKenzie Pegman I used mist nets with playback calls and they are not very effective, espiecially in open habitats. Moreover, in some places when this species occurs, such as urban or roadside habitats, there is often no room for longer/bigger set of mist nets.
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I work with zebra finch embryos (~E4-hatching). I would like to know the sex of the embryos so that I can test whether males and females differ in their responses to my experiments. Our lab is not equipped to do molecular work. I would appreciate any advice about visually distinguishing between male and female bird embryos by looking at internal reproductive anatomy. Thank you!
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From DNA
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Mammals ravage the nests of artificial nesting birds. There are probably modern methods that display data from burglary attempts, etc.
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You could also make nutritional analyes of the predators (feaces, stomach contents). And of course direct controls like Johannes Mayer mentioned or Thermo loggers Florian Straub mentioned. However , nest observation with Fototraps or even better with video observation is the most precise method but with the highest workload.
I have not the rights to upload the texts here, but see:
ZSCHILLE J, STIER N, ROTH M, MAYER R (2014): Feeding habits of invasive American mink (Neovison vison) in northern Germany—potential implications for fishery and waterfowl. Acta Theriologica 59 (1), 25-34. https://doi.org/10.1007/s13364-012-0126-5.
STIER N, ZSCHILLE J, ROTH M (2005): Untersuchung zu den gebietsfremden Raubsäugern Marderhund, Waschbär und Mink in Mecklenburg-Vorpommern mit Forschungsschwerpunkt Mink. Zwischenbericht. Institut für Forstbotanik und Forstzoologie, TU Dresden. 21 S.
VOIGT U, SIEBERT U (2016): Prädation Niederwild. Abschlussbericht für die Untersuchungsjahre 2011-2015 Niedersächsisches Ministerium für Ernährung, Landwirtschaft, Verbraucherschutz und Landesentwicklung. Institut für terrestrische und aquatische Wildtierforschung, TiHo Hannover, Hannover. S.
VOIGT U (2016): Prädation in der Kulturlandschaft. Abschlußbericht Niedersächsisches Ministerium für Ernährung, Landwirtschaft und Verbraucherschutz. Inst. f. Terrestrische und Aquatische Wildtierforschung, Hannover. S.
KÄSELAU S (2021): To what extent do stomach content analyses provide information on predation on ground-nesting birds? MSc. University of Veterinary Medicine Hannover. 31 S.
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Dear all,
The recent studies (including ours: https://1url.cz/rKhj9, https://1url.cz/WKhj8 and https://doi.org/10.13140/RG.2.2.36573.13288) highlight the importance of small farms and poultry yards (especially hens) as an important foraging site for some granivorous birds inhabiting countryside settlements. On the other hand, there are (anecdotal) observations of hens attacking and killing small passerines. Additionally, I expect competition for invertebrates, attracted to poultry-yard but eaten by hens, thus unavailable for wild birds.
I´m wondering if there is some published or even unpublished work/paper/observation of this interaction or other negative impacts of hens and poultry yards on wild birds.
Thank you.
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Suggestion: I do recommend to pay attention to the observations of zoos, where there is a search for food in their exhibitions (of presented birds, or other farmed species) by not only wild birds but also other wild animal species. I assume some experience and knowledge about interesting interactions in this area. - Pozdravujem, Miroslav
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I have recently found a fairly slender isopod attached to the eggs/embryos of an Apseudopsis mediterraneus (Tanaidacea) sampled off the coast of Israel. The isopod itself appeared to be protected by a thin mucous sac.
Any ideas where I should start my search for a possible identification?
Many thanks.
Graham Bird
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Well, this is an interesting subject. I know that Epicaridea are underneath the carapax of many decapods, but even in the most recent paper by Williams & Boyko (2012: attached) there is no mentioning of tanaidaceans. I have checked some papers on Bopyridae, but no tanaidacean in it. May you should ask Christopher Boyko.
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I am having an issue with my bird strike simulation. I am trying to simulate a bird strike with an Elastic-Plastic Solids with Damage and Failure constitutive bird model. I select element deletion option as 'Yes' under Element Type options. Elements are starting to break after a time but they are not vanishing from the model, as in figure. Can you tell me why I am having this issue. Sincerely, Kenan.
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Hi, it might be "standard" behaviour of Abaqus, the fastest way to get rid of the overly displaced elements for visualization purposes is to create a display group, in which the failed elements are not shown:
Create Display Group -> Elements -> Result Value -> Field Output -> DUCTCRT (or whatever damage criterion you might have) -> Min: 0.99 (or some other threshold), Max: 1 -> Remove.
My guess is, that the stiffness is degraded but the elements themselves are not deleted in during the simulation, which would alter the system size. Therefore, they undergo massive distortion.
BTW: I know your figure is not very representative for the quality of the simulation due to the "exploded" elements, but it looks a lot like hourglassing is also an issue, so better use fully integrated linear elements.
Sincerely,
Olaf
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We collect blood in the field from wild birds to determine the sex. We have always used the FTA Classic Card, but we bought the FTA Elute Micro Card by mistake, and we didn't have time to replace them.
Is the lab procedure different for the FTA Elute Micro Card? or can the same methods be used to extract and amplify the DNA?
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Both FTA Elute Micro cards and FTA classic card rapidly inactivate organisms, including bloodborne pathogens, and prevent the growth of bacteria and other microorganisms. Both cards allow to capture nucleic acids in one easy step. The major difference is the sample areas for application.
There are no technical differences between these cards for processing samples. FTA Elute Micro cards will cost cheaper than FTA classic card where FTA classic card can store larger volume of samples than FTA Elute Micro cards. Therefore, you can use both of the cards for avian DNA sexing depending on your resource facilities as well as availability.
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I have investigated the population density of the crested ibis. The crested ibis is a water bird occurs in central China. Its habitat can be divided into a number of watersheds, and the mean size of the watersheds is 150 square km.
I intend to use two explanatory variables (land cover and watershed) to explain the number of individuals in watersheds. The model is:
number of individuals ~ Watershed (4 levels) + Landcover (3 levels) + Year (5 levels)
There is no trend among the five years, so that the variable year were defined as a categorical variable.
In the split plot design, the five years are five replications. The land cover can be defined as a whole plot measurement, and the watershed can be defined as a subplot measurement. The number of individuals in watershed are from tens to hundreds, and I assume it follows a normal distribution.
If I use a mixed effect model, the variable year is a random factor. I am interested in the difference between the four watersheds, so that I don’t treat watershed as a random factor. The land cover is also a fixed factor.
Please let know which model is better, the split plot design or a mixed effect model?
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Thanks Mewa Singh Dhanoa and Roberto Molteni . Mixed effect model has a clear logic. Split plot design is confusing.
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Hi, I was trying to determine the presence and types of microplastics in the respiratory tracts of birds. Other than a few fibers that too in only few samples, I have been unable to find any MPs in my samples. I don't want these samples to go waste, and wish to evaluate them for possible presence of heavy metals. However, (mistake at my part), I had put all samples on alkaline digestion (with KOH). Now, my query is, is it possible to determine heavy metals (HM) in KOH digested samples? Because as far as I know, only acid digestion works for HM determination. Any guidance in this regard will be appreciated.
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To determine metals in biological samples (blood, urine and scalp hair samples). After pre-treatment with nitric acid-hydrogen peroxide, the samples are digested via a microwave oven, and for comparison purposes, the same samples are digested by the conventional wet acid digestion method. The samples digested are subjected to graphite furnace atomicabsorption n spectrometry (GFAAS) and ICP.
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Has anyone had any success with constructing a behavioral test for anxiety or exploratory behavior in the zebra finch? I have already tested several prototypes:
1) A medium-sized holding cage that is recorded from above using Ethovision, using the Open-field template. The birds either stood in place for 10 minutes, or kept flying and grasping onto the walls of the cage.
2) A cardboard cube with equal-area subdivisions on the floor. The birds either stood in place for 15 minutes, or kept trying to fly into the opaque-cloth ceiling. (Open-field type test)
3) A long rectangular prism, also subdivided on the floor, with evenly spaced perches throughout, with an acrylic ceiling.. Again, they froze in place the whole time, or tried to escape through the top. (Open-field type test)
4) For a plus-maze style test, the arena's frame was made of pipes connected to make a three-dimensional plus shape. The sides were covered in chicken wire, and the top was acrylic. The open side was facing the floor. When I put a bird in this, they quickly flew to one side of the plus and back, and froze for 10 minutes.
The birds had these reactions even when they could not see me.
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Can anxiety due increased neurogenesis cause increase in open arm time or entries?
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I want to know what are the various techniques/methods we can use to monitor bird population.
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kindly see,
Recommended methods for monitoring bird populations by counting and capture of migrants
January 1996
David J. T. Hussell; C. John Ralph
and
Introduction to bird monitoring Version 1.0
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I am looking for illustrations of insects parts found in European bird pellets, especially interested on Orthoptera.
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I have had experience in pellets birds. From these parts of the insects, I can judge the presence of beetles. However, identification down to family or species is possible with a clearer photograph. If you make one sample in the photo, I will try to help you. But there are definitely a lot of Coleoptera.
Regards, Sergey
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For some poeple Plastic Road is highly hazardous, especially for aquatic animals and birds. When plastics are exposed to sunlight and especially heat, they begin to turn into a harmful health element called microplastics. This harmful element is absorbed into the soil and has the ability to accumulate toxic substances around it.
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According to a report, in India the central government has been using plastic waste in road construction to properly utilise the material which otherwise is not recycled. So far, one lakh kilometre of road has been constructed using plastic waste, Hindustan Times’ sister publication Hindustan reported
Plastic has been used in the 270-kilometre-long Jammu Kashmir National highway. About 1.6 tonne of plastic waste was used in the two-kilometre-long stretch of Delhi-Meerut highway news UP Gate, according to Hindustan. It has also been used in constructing the road connecting Dhaula Kuan to the airport in Delhi, the report in Hindustan said.
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"Coastal Geomorphology" of Eric Bird -second edition- book has a number of quite harsh expressions for me as a hydraulic engineer. It might be prepared for geologists and earth scientists. I wonder if anyone has a summary -as a presentation for example- to ease understanding the book for other backgrounds.
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I can't find a summary Amaal, but you can look inside parts of the Ebook version here
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Assuming that we have an individual animal (e.g a bird) migrate from a to b locations in three days; the bird follow some daily env stimuli.
Can we use the deep reinforcement learning or simply the Q-learning to train the agent to move from a to b!
What I have found is that we can do so in case the environment is static, ( a simple example avoiding obstacle).
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Many tasks performed by autonomous vehicles such as road marking detection, pavement crack detection and object tracking are simpler in bird's-eye view. Hence, Inverse Perspective Mapping (IPM) is often applied to remove the perspective effect from a vehicle's front-facing camera and to remap its images into a 2D domain, resulting in a top-down view. Unfortunately, this leads to unnatural blurring and stretching of objects at further distance, due to the resolution of the camera, limiting applicability.
Is there an improved version of this technique ? An improved IPM ? How does it work ? I need this to validate my new automatic road crack detection approach.
Greatly appreciate your review
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your welcome Wissam Kaddah
Stay Happy Stay Healthy.
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I need the names of the top journals related with wildlife conservation or birds.
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I strongly agree with Ht. Decemson. There is no "best" journal for these species/topics. - It depends on whatever you have and need. Do not only rely on the IF.
There are a lot of specific "wildlife" or "conservation" journals
Journal of Wildlife Management
European Journal of Wildlife Research
Human-Wildlife Interactions
Wildlife Research
Mammalian Biology
Journal of Wildlife Diseases
Conservation Biology
Biological Conservation
Wildlife Biology
Journal of Wildlife and Biodiversity
Wildlife Society Bulletin
Wildlife Monographs
...
Same in Birds!
Avian Biology
...
However, it is also possible to publish in journals like "Science of the Total Environment".
You can try to find relevant journals here:
There you can sort for topics!
Best
Oliver
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We are working with white-winged snowfinches, alpine bird species breeding in rock crevices, roofs and skilift pylons and struggle to access nests in some of the deeper cavities (50 cm to 1 m). We are using an endoscope, but it is often difficult to access nests in deep cavities when they are really contorted (as we dont know the internal structure of the cavities).
We are mainly interested in counting the number of chicks, but also to place ibuttons for temperature measurements if someone has an idea how to place (and retreat!) them.
I am interested to know which methods people working on similar cavity-breeding birds (preferably rock crevices, as we are facing unique problems ina ccessability and cavity structure as f.i. woodpeckers will not have) use to gather nest information (if at all?).
Thank you very much in advance, Christian
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To anwer solely to the problem of access to the nests hole/entrance in cliff/rock faces habitat, I can suggest you the single rope access (from above or below, it depends by the general context). We used this tecnique to access the rock face habitat to study and monitoring one rare alpine butterfly species:
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In a genomic study of two closely related species of birds and notice many loci that differ between the two species, genomic differentiation occurs, my question is are they mutually exclusive?
I don't know much about genetics, happy to hear your thougths of this
Thank you
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Hi Dimatris
you'll need to sort differences between acquired mutations, SNP and real exclusive variations.
fred
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Dear colleagues,
I am planning to collect blood smear specimens from wild birds in water swamp territories of Shirvan National Park (Azerbaijan, Caucasus). Unfortunately, I have some problems with description of blood parasites from blood of birds — haemosporidians and others.
Due to all above-mentioned moments I invite colleagues in these field in co-operation.
If you know any specialist in this field, please inform me.
Sincerely,
Mehdi Ali.
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There is a online book available:
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I want to use bird scarers in pomegranate crop, kindly suggest
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Physical, chemical and electronic methods are there.
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Can I get the Bird feather DNA extraction protocol Manual? I would like to have a manual protocol rather than a kit method.
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I guess the following video will be helpful
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Hi
How do we interpret the scatter plot to assessing the response of the bird community toward the logging effect?
The X-axis is the relative abundance of the bird species recorded before logging
the Y-axis is the relative abundance of the bird species recorded after logging.
Do there have any suitable analysis is recommended for assessing the response of birds towards the logging effect?
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I am slightly surprised that the best fit line has a gradient higher than 45 degrees. If it does, this is probably caused by the presence of 6 new species that were not there before, compared to the complete loss of only 2 species. Of the species that were originally there only one of them is relatively more abundant after logging.
As there are new species present it makes it is necessary to be careful interpreting relative abundance figures. About 20% of the post logging population is new species. About 7% of the pre-logging population is not there. This will push down the relative population of the remaining species by about 13% even if their numbers didn't change.
It is important to also use the actual numbers present. It may be that the actual number of birds has fallen by a factor of 100, except for the few on the left-hand axis that now have the same numbers but are now relatively much more abundant.
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Being in different biotopes, ornithologists find nests of wild birds, catch them for study. Birds are carriers of ticks, which in turn are carriers of viruses. In addition to itching, they do not harm humans, but through clothing or other things, feed can get onto poultry. Therefore, I would like to know modern methods and measures to combat ticks in wild birds caught in the forest?
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Hello,
I think the question is badly put.
Wild birds and their parasites, as well as the parasites of those parasites, etc. form an ecosystem that has been evolving for millions of years. To remove one element of this ecosystem, assuming that it is practically feasible, does not seem desirable. Such a disruption could have cascading consequences that are totally unpredictable.
Assuming that birders can act as vectors for these parasites between wild and farmed birds, the most reasonable course of action is probably to adopt precautionary measures to limit access to poultry farms by birders, or to offer them appropriate disinfection measures, and, if the threat is proven, to limit contact between wild and farmed birds by using appropriate fences or netting
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Good morning
I am doing a project on auditory enrichment for two rescued Senegal parrots (Poicephalus senegalus). I just wondered if anyone had done something similar with any other birds in the Psittacidae family as I am very interested in this subject.
Thank-you in advance, I am new on here so hope this is okay to ask?
Kind regards
Sally
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auditory enrichment for two rescued Senegal parrots (Poicephalus senegalus
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I want test reinforcement learning controller in quadrotor. I want buy quadrotor and check some paper used AR.Drone 2 , crazyfile and humming bird quadrotor. which of this quadrotor better for test reinforcement learning controller.
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I'm looking at gut bacteria in heat stressed birds but I'm not certain after how long can I sample faeces after episode of heat stress. I don't want to sample early before the changes shows in faeces or too late.
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@Vineet Singh thank you. The broiler article is very interesting and informative
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In many fields, farmers use this nylon net to trap birds and insects which feeds on the fruits and seeds. In farmer's point of view, it minimise their loss but from ecological point of view it kills lots of birds and insects. Many birds got trapped and die as a result of this kind of application as observed. So, from ecological point of view is it good? Please comment your own view regarding this issue.
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In Ghana, some rice farmers use net to trap birds. These birds are very destructive and can cause 100% yield loss. Some of these birds serve as food for the farmers which does not help ecological balance. The question here is should farmers stop trapping birds as pest or insect pest? No, researchers must develop technology that can help solve pests problem ecologically. You can as well relate the net as trap to yellow sticky trap for controlling insects, they all serve the same purpose.
As some of these birds or insect pests becomes national problem, ecological friendly must adapt in fighting them.
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Is it good to use linear regression?
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if the variables are categorical, you can use logistic regression analysis, odds ratio & relative risk, chi square and many more. Hope you can help
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In a nice article on a mimicry system
it is stated that model and mimic have to co-occur.
I believe this is wrong.
Imagine a migratory bird that encounters the model in Africa and the mimic in Europe (or vice versa). Model and mimic do not have to co-occur. They only have to be experienced by the same individual.
Does anybody know such cases ?
Peter
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Here is a paper about this (which I did not know)
Surprisingly it states that there is no such case known !
Surely, this must be for lack of looking. !!
Peter
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We conduct research on domestic animals and birds behavior is to improve welfare. We study the housing enrichment different of feeding system etc using continuous videos which generate huge data. How do we analyze it by automated software?
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I performed Indirect ELISA of 63 birds out of 63000 broiler poultry birds.
Age 33 days.
shed type : Semi control shed.
vaccinated against NDV was done at age 1 day old.
The mortality increased in the shed when ELISA performed by IDEXX kits by using Imark following was the result.
Need to discuss with experts.
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I would like to compare egg pattern between cuckoo and host eggs to measure pattern mimicry. In the past I have used a tool developed by Troscianko and Stevens (2015) to do this, but I was curious to know if there were any other tools out there that could be used to compare similarity in egg pattern between different bird species? Also, if anyone has suggestions about a good way to measure egg shape, I would be happy to know that too!
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Continue........ ...........
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Hey,
I was wondering if you can answer my survey in as much detail as possible. I understand some pictures are the same but you can simply put N/A on them. Ideally the first two pictures would be helpful to write in as much detail as possible and the final question about birds.
However its based on the proximity of the birds and how it makes you feel being further away or closer.
Thank you.
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Sure!
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I am writing a report for university looking at bird communities in 3 different habitat settings. The data looks at the whether both bird abundance and bird diversity differs between habitats. I have data from 2019 and 2020 taken from the same locations, looking at the same species of birds and was hoping to get clarification on whether the data can be combined or whether it would need individual analysis using R and then a written comparison.
I only ask on here as I am trying to excel my writing capabilities in preparation of writing my dissertation.
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No. Please don't.
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Kleptoparasitism is a form of feeding in which one animal takes prey or other food that was caught, collected, or otherwise prepared by another animal, including stored food. It is common among seabirds, birds of prey and insects.
This interaction is a kind of "competition", "parasitism" or even is it a specific ecological interaction? If you know, can you provide a bibliographic reference for that?
Thank you!!
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Kleptoparasitism is a form of contest rivalry because it results in resource loss by direct interactions.
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Dear colleagues,
We are conducting a research on the influence of anthropogenic pollution on different types of bird colouration, including both feathers and bare-parts of skin. In this study, we aim to estimate the scale of the problem and to identify significant knowledge gaps for better targeting of future research. Specifically, we would like to focus on two aspects:
- the impact of specific types of pollution (e.g. heavy metals, polychlorinated biphenyls or radiation), preferably with a known concentration in the studied habitat or bird's tissues, on the expression of colour traits.
- the influence of urban environments on the expression of colour traits, preferably in studies comparing birds from urban vs rural/natural habitats.
We are seeking the data from both correlative and experimental studies. Whenever possible, we would like to request the raw data, with means, SE and sample size, otherwise we also request for correlation and other statistics from the models, together with sample sizes.
Examples of data we prefer are:
Differences in colouration between control and polluted/anthropogenic pressure treated groups
Correlation between pollution/anthropogenic factor and colouration
We will consider all measures of colouration (spectrophotometric, photography-based, colour scoring).
If you have any kind of unpublished data, data from PhD thesis, or from the upcoming articles, we will be very thankful for possibility to include your findings in our study. We are waiting for the data until the 15th of May.
We will be very grateful for your contribution!
Best wishes,
Agnieszka Gudowska (Jagiellonian University, Kraków),
Katarzyna Janas (Jagiellonian University, Kraków),
Szymon Drobniak (Jagiellonian University, University of New South Wales, Sydney)
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Dear Andrew,
Thank you very much for your message and suggestion!
Best Regards,
Katarzyna, Agnieszka, Szymon