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I need to sequence an entire bacterial gene (6.1 kb). Is there a way to do it other than amplifying several smaller overlapping fragments for Sanger sequencing? Can I Sanger sequence the whole amplified gene using "walking primers", and if so, how is it techincally performed?
Is there any other method to sequence a single gene?
Thanks
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You can ,as you say, pcr amplify overlapping 800 base amplimers ( you get no useful sequence under the sequencing primer or for the next 30 bases). If you can amplify the whole 6KB in one amplimer then you just need overlapping sequencing primers at 800 base intervals along the whole sequence but just the one template dna. If you have a friend with a minion sequencer or NGS then new sequencing technology is good and quick but not cheap or easy to analyse the results
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I am looking forward to detect toxoplasma exposure in animals using Modified Agglutination Test (MAT), It seems the bioMérieux Toxoplasma MAT kit has discontinued its production. Can anyone suggest another commercial MAT kit?
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Dennis Niewiadomski
Thank you, I'll have a look.!
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Is there any alternative serum that can be used instead of rabbit serum in culturing the leptospira bacteria? 
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We are able to propagate Leptospires without serum in HAN medium at 37C, 3% CO2. https://www.nature.com/articles/s41598-020-66526-4
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What are the most reliable and scientific online/offline veterinary databases/softwares with organised guidelines and protocols which could help clinicians to reach the best diagnosis and treatment in the the shortest possible time?
In fact I am looking for a database/software like "Up to date" which is used in human medicine. I would highly appreciate if one can introduce such a database/software.
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Hi
Iwould ask about any information of a new serological diagnostic kit of Salmonella spp. in birds (pigeon)? thanks
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greatful Dear Furqan Al-Araji
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I want to confirm or disprove the presence of autophagosomes in salmon pancreas, anyone who has tried with a suitable antibody for immunohistochemistry?
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intestinal, parasite, diseases, camels
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intestinal parasites of camels differ from country to country and from continent to continent so you should indicate the locality.
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For my research on the transmission and effects of zoonotic diseases (particularly Anthrax and Brucellosis)  to slaughterhouse workers.
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Yes, using epidemiologic triad there will be a need for the environmental factors to come into play for an effective interaction between the pathogens and the hosts. How that work out will be a complex interaction among the environmental, host and pathogen factors. 
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administration of colloids is it safer in dogs with cyanosis or hypoxia of unknown condition, immediately after presented to the veterinarian. because the dog was anorectic for past  four days and dehydrated due to vomiting. suspected for FB and treated. vomitus had wood particles. can any one suggest me the condition and treatment
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colloidal solutions can be used in life threatening situations however it must be followed by a crystalloid solution administration for long-term therapy to avoid hypovolemia
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I start a project about the prevalence of GIT nematodes in horses reared in middle province of Iraq , I need the most accurate method for identification .
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Generally the classical method including the direct and concentration (flotation and sedimentation) method to observe the eggs and you should be use the culturing of eggs to hatching to larvae that which used for difirentiation among nematods.
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I need it for Ascoli test, but can't find anywhere. Last time I found it in Czech republic, but they do not produce it anymore!
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Thank you for information.
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Um published an article about MRSA in dogs and its association to MRSA in human and another article about MRSA in food and I would like to look at your project and to see how MRSA could be prevented in different environmental conditions. I will be pleased, If there is a possibility to cooperate in research work in near future.
Prof. Yaser Tarazi
Faculty of Veterinary Medicine
Jordan University of Science and Technology
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Dear Prof Tarazi,
I am not working with MRSA anymore. Could you contact. Prof. Stefan Schwarz, now head of the veterinary microbiology in Berlin. You can cite my name. He is expert for antibiotic resistance.
B.r.
C. Lämmler
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Intravenous lipid emulsion has been used in human and veterinary medicine to treat a variety of intoxications in recent years.
The potential mechanisms:
1. Sequestering the toxic substance in a new lipid compartment within the intravascular space (known as a “lipid sink”);
2. Improving mitochondrial function by providing a source of fatty acids for metabolism; 
3. Providing cardiomyocytes with energy substrate and;
4. Improving cardiomyocyte function by increasing intracellular calcium.
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Hamster can eat and drink without any difficulties.
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Dear Martyna,
tongue edema (and probably throat edema that you aren't visuallizing) and paw edema are signs of a type I hypersensitivity reaction.
If this is an adverse reaction that you are not interested in investigating, I suggest using an antihistamine drug (like diphenhydramine) before injecting the melanoma cells. Since you are working with tumor cells I would not recomend you to use corticoids which can modify the immune response.
Best regards
María
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Two individuals of an ectoparasite were recovered from the body of a Jungle Cat (Felis chaus) rescued from Kaziranga National Park, Assam, India. It would be great if someone can help in identifying the same with taxonomic keys or related links/papers. Please find attached the images of the ectoparasite.
Regards
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Hey Debabrata Phukon,
This specimens is neither a Heteroptera (Hemiptera), nor a Ricinidae (Phthiraptera).
It is indeed an Amblycera (Phthiraptera), but from the family Laemobothriidae (genus Eulaemobothrion, which is considered as subgenus in Johnson & Clayton and Price & Graham both cited above).
This is an obvious contamination, considering that no mammal species are known as regular host for Laemobothriidae, they are restricted to birds. Your finds is a typical result of a prey/predator contamination, the hosts which could be provided this specimens to your jungle cat was a member of: Gruiformes or Ciconiiformes.
My best wishes,
Michel
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- Molecular profiling by means of techniques in PCR and transcriptomics
- real time PCR techniques to compare healthy gut with the commonly infected gut (bacterial, viral, protozoal and helminth)
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Hi......
here is an article related to your question http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4641665/#!po=47.5000
Wish you all the best
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ll
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I would like to know the ability of the animal to maintain body temperature during heat stress using rectal temperature as an indicator
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Country, company?
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Does anybody can share the protocol on taking the skin lesions from horses for Leishmania detection ?
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Diagnosis of cutaneous leishmaniasis in horses is made by impression smear or biopsy of the lesion with protozoa identified within macrophages in stained smears. Polymerase chain reaction (PCR) and sequence analysis can be used to confirm the diagnosis and identify the species. PCR targeting the internal transcriber spacer 1 (ITS1) is the most sensitive. Serology tests are unreliable, horses can have antibodies from a previous (silent?) infection.
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I found these structures in a dog's fecal sample examined with sedimentation . 20X weight took this photos, first one's measure is approx 84*49 µm, second one is 68*53 µm. I suspect from Alaria spp egg?
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Hi Mohammed
The egg of  Alaria has a big size(120 × 65 µm).  The egg of Troglotrema salmincola
(Nanophyetus schikhobalowi) is like it with 87 µm- 97µm X 38 µm- 55 µm size. It is limited to the geographic range in the United States, but has been reported from Russia. You Should see other characters.
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In addition, information regarding lower critical temperature and thermo-neutral zone of buffaloes would be highly useful along with references. How varying protein and energy during cold stress/winters impacts animal performance? 
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Dear Hujaz,
this review should be ok
BUFFALOES' REPRODUCTIVE AND PRODUCTIVE TRAITS AS  AFFECTED BY HEAT STRESS by  I.F.M. Marai * and A.A.M. Habeeb**
best regards
Martino
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What is the expected sensitivity and specificity of electrical conductivity for detection of subclinical mastitis of buffalo?
What is the expected sensitivity and specificity of electrical conductivity for detection of subclinical mastitis of buffalo? I am using roc curve.
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I found its sensetivity near 66% and specificity near 50% in correlation to organisms isolation but I think those results too low. Is there any one have another results or explenation
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Many pathogens (infectious and not) cause mastitis in dairy cows. When herds are correctly managed the infectious causes are minimized, but mastitis still remains the most important disease in dairy cows. What is the more difficult pathogen that farmers and scientist should contrast or prevent?
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Both S.aureus and   other pathogens, ( E. coli; Str. uberis, etc.) are very important bacteria  causing mastitis and their patogenity might be favourized by oculte viral infections that decrease immunity, like BVD and also by any stressfull conditions. Endometritis is a source of infection
Protothecal mastitis reports are increasing.
Subclinical hypocalcemia decrease the tonus of mamelonar sphincter facilitating the colonization with fecal germs
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We need to know what are the ranges of concentration of catecholamins considered as physiological in donkey species, as we are not able to find bibliography on this topic. We need to compare our experimental results to healthy ranges in this species.
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Many thanks for your suggestions. Pasquale
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I found many ELISA kits for humans, rats...etc. and their prices are around $200 for a plate of 96 wells. When I looked for those prepared and marketed for horses, their prices start at $500 and up (I am aware of this issue on many products, but that is not the point here). I know about antibodies cross-reactivity, but I don't have much funding to support validation work. Does anyone know of "non-equine" ELISA kit that has been validated for measuring equine plasma cortisol? Thank you in advance
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If you are still looking, we show that MyBiosource has 2 different ELISAs they claim are specific for horse Cortisol. Just search here: http://www.linscottsdirectory.com/search/products for Horse Cortisol. "More Info" links go to their datasheets.
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About 16 year old mare shows oestrus at 15-20 day interval, during last two months she showed oestrus for four times. what could be probable reason? simultaneously she was covered also but didnt conceived.
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we performed endometrial cytology but didnt reveal any inflammatory cells , only parabasal type and few eratinized cells were seen. the mare was not showing any abnormal vaginal discharge too. Is it so in early cases of CEM?
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these ticks are collected from wild rabbits please anyone can confirm me their species.
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First two photographs  belongs to nymphal stage of Hyalomma sp ticks due to longirostrum , bifid  first coxa and sickle shaped ventral plates, Other 3 photographs belongs to Hemaphysalis sp ticks due o the presence of lateral prolongation in the third segment of pedipalp , spur in the first coxa and absence of ventral plates
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I want to know if anyone knows a software that can help me to estimate number of lesions or classify the pathology find on pictures (regular camera) taken from fresh lungs at the time of necropsy. I want to classify pathology by another method that is not empirical (human eyes).
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I need to strongly second the statements of Jean-Martin as regards this and emphasize that unless you do histopathological analysis of at least some of your gross lesions your results will be dubious at best. With proper experimental planning and knowledge of the disease distribution in the lung lobes (particularly possible in the case of widely disseminated or multifocal patterns) you can designate a lung lobe consistently for pathology.  You then tie it off and formalin fix it separately. This leaves the other lobes for use in other analyses. This is done regularly for ferrets and even mice so certainly might be done for rabbits.  Then you can do gross/histo correlates for every animal in your study. 
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Hi Everyone,
I am looking in detecting some cytokines (i.e. IL1 or 6...) in feline blood and I am looking for some advice. So far I have been looking at ELISA as a possible method, but could not find a company offering it but one which only offered multiplex system which needs a special reader that I don't have. So I am asking our community if someone has experience with or an idea of a company I could get in touch with?
Cheers
Thierry
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Real Time polymerase chain reaction (RTPCR) could be a method for detecting cytokines. Try finding information along this area. Goodluck and cheers!
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All researchers are welcome to send camel sera from suspected areas together with retropharngeal and/ or supramammary lymph nodes. Sera will be screened with the buffered acidified plate antigen test and confirmed with the complement fixation test. Lymph nodes will be bacteriological examined for Brucella and isolates identified to the biovar level. The sender will be responsible for sending the samples by a suitable means according to the international regulations. Lab testing will be performed at no charge to the sender. Any additional lab work can be arranged for by the cooperating parties. Results will be included in a collaborative publication. I’m looking forward to hearing from you soon.
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Dear colleague,
Thank you for your concern.  The samples will be sent to me at the following address:
Dr. Ashraf Sayour
Department of Brucellosis Research
Animal Health Research Institute
Nadi El-Seid Street, Dokki
Giza 12618
Egypt
My mobile number is +201005056559
My Skype account is Ashraf Sayour
Kindly inform me before sending the samples one week ahead to arrange with the veterinary quarantine at Cairo's International Airport.  Yes, tissue samples from suspected/ positive camels are extremely important for isolation and identification of Brucella to the biovar level.  I have already published a paper on camel brucellosis with sera only and I'd love to do some bacteriology.
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We found in a female camel with a unilateral huge follicle, with very thick wall. After ovariectomy, the cavity was corrugated and completely filled with clotted blood. the animal had a history of long anestum. Is this a case of  "hemorrhagic follicle" which has been described in mares? 
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Histopathology and hormonal analysis will be done. The interesting question is the origin of this huge cyst? LH deficiency or other cause? what would be its fade?. The female camel had a history of long-standing anestrum.   
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Have anyone experience with diagnosis of Tritrichomonas fetus in bull?
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Laboratory diagnosis of tritrichomonosis in infected herds is usually based on microscopic identification of the parasite from preputial washings samples from herd bulls either before or after culture in appropriate media. We used the  Sutherland modificated medium. Culture development may take up to 7–10 days (35-37ºC), and even after that the unambiguous identification of T. foetus from other Trichomonas may be difficult. Then you could think about doing in addition PCR for diagnosis. I attached a paper.
Good luck!!
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Can culdoscopes be used for the diagnosis of precervical uterine torsion or any peripartum pathological conditions in goats?
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For details, what is theCuldoscopy? 
 Culdoscopy is a medical diagnostic procedure performed to examine the rectouterine pouch and pelvic viscera by the introduction of a culdoscope through the posterior vaginal wall.The word culdoscopy (and culdoscope) is derived from the phrase cul-de-sac, which means literally in French "bottom of a sac". More accurately, the name hints to a blind pouch or cavity in the female body that is closed at one end and, in a more specific sense, refers to therectouterine pouch (or called the pouch of Douglas).
Culdoscopy is an important gynecological diagnostic technique, is gaining wide acceptance. Culdoscopy is a type of vaginal sterilization procedure.[3] Its name is derived from the posterior cul-de-sac, a space behind the cervix where it is possible, under local anesthesia, to insert a small illuminated telescope through which one may inspect the pelvic organs, without having to resort to a major abdominal operation, as was formerly necessary. Conditions diagnosable by culdoscopy include tubal adhesions (causing sterility), ectopic pregnancy, salpingitis, and appendicitis.
"A major advantage of a culdoscopy is that there are no abdominal incisions. Culdoscopy tends to be reserved for obese patients or for women with a retroverted uterus. This transvaginal procedure involves a small incision made into vaginal wall. Research is showing that this method is safer than originally thought. Yet, a culdoscopy may be difficult to perform because it requires a woman to be in a knee-to-chest position while under local anesthesia. A culdoscopy takes about 15 to 30 minutes, and women are able to go home the same day. It may take a few days at home to recover. Sexual intercourse is usually postponed until the incision is completely healed, which usually requires several weeks, and there are no visible scars."
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As there is evidence from the basal metabolic rate that animals having higher BMR and lower BMR may have difference in Antibiotics dose.
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I think it all depends on the route of administration of the antibiotics. With oral administration via drinking water what is considered is the quantity (weight) of the antibiotic and the volume of water in which the drug is to be suspended/dissolved. With parenteral administration (which is unlikely in chicks) the body weight is taken into consideration in calculating the dosage.
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We had a patient - 5 years old with "runny nose" and espiratory problems - there's no bacterias in nose effuent and it´s white so there is suspicion to some heart problem. We made USG of heart but we didn´t find any articles about sloth´s heart so it's not easy to find diagnosis.
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I'm sorry but I have never seen a sloth.
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A mobile vet clinic I volunteered with was using Telazol as the induction agent. Recovery in the dogs/cats was variable, but most often resulted in erratic behaviour. Is there a better option to use in this setting?
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As with all anesthetics it depends greatly on the animal.  Most commonly used is a 50/50 mix of ketamine/diazepam unless you're dealing with higher risk (i.e. old age, cardiac disease, etc.) then I would tend to favor propofol.  However, given you're in a mobile setting ease of administration and storage is key here, I would also look into the possibility of Etomidate, fairly new into use in the veterinary field, because it's not usually considered a controlled substance and has a long shelf life. However if you're not able to utilize any of these options, I agree with Dr. Chandrasekar, mixing with ketamine is your best option.
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I am planning to use a BALB/C mice for inducing humoral or immunogenic responses. In literature it is reported that the authors used female mice for this kind of experiments, and this same procedure is reported in all articles that I read. What is the scientific reason for this? The ethical committee need this justification before they approve my proposal.
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I thought you might be interested in this article...
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Blue tongue ARN extraction
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Use Trizol.
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Why should I use ultrasound instead of other diagnostic methods?
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There are no other easily performed techniques. Ultrasound is a non-invasive technique that permits visualisation of the equine eye, we have found it useful to identify detached retinas and to assess the location and size of intra-ocular tumours. You can quite beautiful, detailed intervals using a standard 7.5MHz linear probe, scanning through the closed eyelids in a horse with no or minimal sedation. So is easily performed, quick, cheap and does not require specialist equipment such as MRI or CT.
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What is the most reliable test for avian retrovirus identification and isolation?
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thanks Dr Qussay.......
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There is very little published on how a GI protozoa is assessed to be pathogenic in reptiles. Not only that, but the line between commensal and pathogenic is virtually inapparent. There is much conflicting information, but with the number of factors that can come into play, I'm looking for anything that can help create some form of definitions.
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Dear Adolf,
the question is to my opinion too complex...
personally, i would be cautious with terms "pathogenic" versus "apathogenic", because, we actually have only little evidence based data (especially from experimental infections) in reptiles; in natural infections, we deal with a lot of coinfections (e.g. bearded dragon with different flagellates, coccidia, cryptosporidia and amoeba); it is difficult to assume the role of each of them in the pathogenesis of disease; furthermore cases are complicated by presence of evtl. bacteria, viruses and helminths...i prefere personally low or e.g. high virulent organisms. why complex?
on the one side, we deal with a lot of different reptile species...so one parasite can be more virulent to some, e.g. Entamoeba invadens for snakes or lizards and less in turtles; there are some evidence that same can be true for flagellates (for Parabasalia like Monocercomonas or Hypotrichomonas; but also diplomonads like Hexamita); e.g. we virtually see no symptoms in tortoises with Parabasalia flagellates, but in some cases in snakes or lizards.
on the other side, to predict some pathogenic role of an organism, we have to know the species or even strain. This is a real problem with e.g. Entamoeba spp., where a fecal diagnostics at species level by molecular tools is still a problem; also in flagallates or some ciliates (of course there are also other protozoa occuring in reptiles...).
with Cryptosporidium, man labs are offering differentiation at species level (usuling by sequencing of 18S rDNA) which is very important, in order to exclude "passing true organism" from prey animals and there are many data now available in literature on pathogenicity...
With coccidia...based on the host specificity, one should consider them individually at species level of the reptile, but there is some evidence that e.g. Isospora can cause diseases e.g. in bearded dragons or chameleons (especially in young animals) based on direct life cycle and accumulation within an enclosure with bad hygiene; same is the case with coccidia infecting the gall bladder as Choleoeimeria; but low virulence is assumed for coccidia with indirect life cycle as e.g. Sarcocystis; also to be excluded are coccidia from pray animals like e.g. Eimeria from rodents/rabbits in snake feces.
With ciliates some are regarded low virulent like Nycthoterus and some as facultative pathogenic like Balantidium.
best regards
Niko
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We try to find out a new antigen of animal disease in ELISA. In fresh positive sera, a selected antigen strongly reacted, but don't react in a majority of old positive sera. Do you know any factor related to antigen-antibody reaction in ELISA? Other antigen as LPS is no problem between fresh and old serum.
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First, I think so but LPS antigen is no problem between fresh and old sera.
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Fascila hepatic, diagnostics
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Oh, I planned to work on Fas. diagnosis by PCR but I have no idea about your question if you likes to share me inform me
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The images are taken at a magnification of x40 through a light microscope. Each division on the eye piece graticle equates to 2.5µm. The samples are derived from Macaca sylvanus and stained with iodine. (Image measurements: 37.5µm x 25µm)
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Refer to Kooriyama et al, 2012. and compare your first image with Streptopharagus
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The ECG was taken in the Base apex lead from sheep.
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Hi,
If you adjust (alterate) the height/width of the file, you will find those P waves even before the ninth complex (see the attachment). There is a slight variation of the aspect of the P waves which could rise the possibility of an intraatrial wandering pace-maker - but is difficult to tell from only one derivation. It could very well be a normal sinus rhythm with some baseline artifacts.