Toxicology

Toxicology

  • Jin wuk Lee added an answer:
    1
    I won't to know what the safe level of incorporation of a compound. I did a toxic. test and only have 30% of mortality. Do I need to test more doses?

    I did a toxicological test in artemia with 3 different concentration of a compound, for 24h and then check the mortality. 

    Jin wuk Lee

    In my thought carring test for more concentrations involving the concentration leading to 100%mortality is necessary to obtain LC50 value. 

  • Venkatesh Kamuju added an answer:
    3
    What is the cause of high mortality rate in rats after taking Liagora farinosa extract?

    i injected rats with a methanolic extract from Liagora farinosa red algae with different doses (1.25, 2.5, 5, 15 mg/ kg) and different routes of administration (oral and ip) for 2 weeks and found high mortality rate with abnormalities in the internal organs and the body. Knowing that the literature mentioned that liagora has in vitro antioxidant, anticoagulant, antibacterial and antiviral activities. Do you know the cause for this?

    Venkatesh Kamuju

    Acetogenins which contain acetylene functionalities are present in  Liagora farinos.These compounds are lethal at 5–8 μg/ml range and your selected doses may have high concentration which is responsible for mortality.

  • Malek Hassanpour added an answer:
    7
    What are the potential applications and toxicological concerns of metal nanoparticles in environmental management?

    Nanotechnology is being promoted as a new generation environmental remediation technology with immense potential to provide cost-effective solutions to many of the most challenging environmental cleanup problems.  Silver,copper, gold, iron oxides, titanium oxides are some of the commonly used nanoparticles (NPs) that can be used in environmental remediation. Further, nanoparticles can be used as selective and sensitive sensors to monitor toxins, heavy metals and persistent organic contaminants (POPs) in soil, water and air environments. But there appears pitfalls in the horizon! Toxicity issues have raised important environmental concerns. Although we need to make a trade-off but scientist are hopeful about benefits of this new "magic bullets", which far exceed their put-down-able drawbacks.

    Malek Hassanpour

    Dear Dr

    Only abstract is in English.

    https://www.researchgate.net/publication/282862656_Investigate_health_hazardous_of_nanotechnology_and_Nano-particles_application

    Regards

  • Sunil Dhiman asked a question:
    New
    Do plant based formulation require ethical clearance for testing? Do these require licence from any regulatory body for production and sale in market?

    Many companies are now a days in manufacturing and sale of plant based repellents or lotions for repelling mosquitoes and other insects. I am not aware whether they have conducted any animal trials and recorded its toxicological profile before using on human specially on risk group individuals. Plants based repellent may not be safe as claimed to be natural and safe by manufacturers.

  • Abd El-Fatah Abomohra added an answer:
    3
    I am looking for a Cyanobacteria to be used in a toxicology study on agricultural runoff, any suggestions?

    I am looking for a cyanobacteria to be used in a toxicology assay on agricultural runoff. Preferably a single celled cyanobacteria with a large role in the nitrogen cycle that would survive in freshwater/ pond water and that would be easy to plate on solid media. I have a cultivation set up and plan to use BG-11 media and plates.  I have tried a few strains already but lately have been running into some issues and am looking to start over with something that may be a little closer to ideal.

    Any and all suggestions would be appreciated.

    Abd El-Fatah Abomohra

    Please read this paper

    https://www.ncbi.nlm.nih.gov/pmc/articles/PMC91802/

  • Izzettin Hatip-Al-khatib added an answer:
    23
    How does one determine doses for acute, sub-acute, chronic and sub-chronic toxicity?

    What is the criteria about doses in mice and rat for toxicological screening of the test compounds????

    specially, in case of acute, subacute, chronic and subchronic toxicity studies.......in Swiss albino mice and Wistar rat????  

    Izzettin Hatip-Al-khatib

    It seems that this  subject is still not settled and no full consensus on the matter had  been established. Some try to adopt the duration of disease or toxicity on drug administration. Even some information are realy confusing. The clear-cut answere which I think practical is: Acute- single or multiple administration and observation for one day;

    Subacute -two days-several days or weeks (up to 29 days); Subchronic-30- 90 days; 

    Chronic: Above 90 days. 

  • Sergei A. Ostroumov added an answer:
    1
    Who can provide data on toxicity of detergents to freshwater bivalve molluscs?

    I did experiments on effects of detergents on a variety of organisms and want to compare notes.

    Tags: ecotoxicology, aquatic toxicology, molluscs, 

    Sergei A. Ostroumov

     ARTICLE published,  environmental science, water quality improving.
    http://5bio5.blogspot.ru/2017/06/3006unioexplanation-of-novelty.html;

    Freshwater mussel, Unio tumidus  (the swollen river mussel);

    https://www.researchgate.net/publication/10614386 ; 
    Reference;
    Ostroumov S.A. Responses of Unio tumidus to mixed chemical preparations and the hazard of synecological summation of anthropogenic effects. - Doklady Biological Science (Dokl. Biol. Sci.), 2001, 380: 492-495. 

    Responses of Unio tumidus to mixed chemical preparations and the hazard of synecological summation of anthropogenic effects. https://www.researchgate.net/publication/10614386; [discovery of toxic effects of detergents on freshwater mussels];. Available from: https://www.researchgate.net/publication/10614386_Responses_of_Unio_tumidus_to_mixed_chemical_preparations_and_the_hazard_of_synecological_summation_of_anthropogenic_effects_httpswwwresearchgatenetpublication10614386_discovery_of_toxic_effects_of_det [accessed Jun 30, 2017].


    EXPLANATION OF SOME OF NEW FACTS DISCOVERED IN THIS ARTICLE:
    Unio tumidus, freshwater mussel (the swollen river mussel) , is a common species of  molluscs (mollusks) in freshwaters (e.g., streams, rivers). These molluscs filter water. By doing so, they contribute to improving water quality (water self-purification). In this publication, the author reports his new experiments, which discovered toxicity of detergents to freshwater mussel. As a result, the filtration activity of the mollusc slows down, with bad and catastrophic consequenses to water quality.


    EXPLANATION/COMMENT ABOUT NEW IDEAS, NEW FUNDAMENTAL CONCEPTS IN THIS ARTICLE:

    in this paper, the author formulated a new idea that is presented in a concise form as a new term coined by the author, namely, 'synecological summation of anthropogenic effects'. One of the anthropogenic effects under consideration in this article is the toxic effect of detergents on the freshwater mussel, namely, a decrease in water filtration by the mollusc. Another anthropogenic effect considered is the effect of phosphorus load on algae. You need to read the publication to learn more on this new concept of 
    'synecological summation of anthropogenic effects'. 

    • Source
      [Show abstract] [Hide abstract] ABSTRACT: [Discovery of toxic effects of detergents on freshwater mussels, Unio tumidus]. Unio tumidus is the scientific Latin name of a common species of freshwater mussels which filter water. This paper is on the prestigious, honorable list titled 'Top papers, books on aquatic ecology, ecotoxicology' at the largest global library catalog, WorldCatalog; this paper was rated as 'Excellent' at this catalog. Bookmarked. https://www.researchgate.net/publication/10614386 ; Ostroumov S.A. Responses of Unio tumidus to mixed chemical preparations and the hazard of synecological summation of anthropogenic effects. - Doklady Biological Science (Dokl. Biol. Sci.), 2001, 380: 492-495. EXPLANATION OF TERMINOLOGY. Unio is a genus of medium-sized freshwater mussels, aquatic bivalve mollusks in the family Unionidae, the river mussels. Unio is the type genus of the family Unionidae. EXPLANATION OF SOME OF NEW FACTS DISCOVERED IN THIS ARTICLE: Freshwater mussel is a common species of mollusks in freshwaters (e.g., streams, rivers). These mollusks filter water. By doing so, they contribute to improving water quality (water self-purification). In this publication, the author reports his new experiments, which discovered toxicity of detergents to freshwater mussel. As a result, the filtration activity of the mollusk slows down, with bad and catastrophic consequenses to water quality. ** Full text available free: http://www.scribd.com/doc/49065621/; http://www.scribd.com/doc/49065621/Responses-of-Unio-tumidus-to-Mixed-Chemical-Preparations-and-the-Hazard-of-Synecological-Summation-of-Anthropogenic-Effects-Danbio51-2001v380-E-U-tum; http://www.scribd.com/doc/49065621/; ** Abstract: Responses of the freshwater bivalve Unio tumidus to mixed chemical preparations and the hazard of synecological summation of anthropogenic effects. - Doklady Biological Sciences, 2001, Volume 380, Numbers 1-6, p. 492-495. ISSN 0012-4966 (Print) 1608-3105 (Online). DOI 10.1023/A:1012344026176. The author introduced a new concept and term, “the synecological summation of the effects of anthropogenic factors on organisms”. In the new author’s experiments, the effects of commercial detergents, which are chemical mixtures, on bivalves (detergent OMO, freshwater mussels Unio tumidus) were studied. Detergents exert two types of hazardous effects on organisms and ecosystems: the phosphorus-induced stimulation of phytoplankton growth and surfactant-induced inhibition of filter-feeders. Because filter-feeders are an effective natural factor of control of unicellular plankton populations, the two types of the detergent-induced effects on ecosystem facilitate the growth of phytoplankton populations. Therefore, these effects sum together, thereby increasing the hazard of the man-made impact on the ecosystem. The results contribute to a better understanding of the potential ecological danger of pollutants for integral functions of ecosystems. It is the synecological summation of the effects of anthropogenic factors on plankton populations and filter-feeders that is of particular concern. The interaction between populations of plankton organisms and filter-feeders that feed on plankton should be taken into consideration in the studies on the ecological effects of synthetic detergents on these populations. Situations of man-made impact should be analyzed with using the synecological approach to the problem. http://sites.google.com/site/2001dbs380p492unio/; www.springerlink.com/index/L33309208H28L87R.pdf; DOI 10.1023/A:1012344026176; PMID: 12918414 [PubMed - indexed for MEDLINE]
      Full-text available · Article · Sep 2001 · Doklady Biological Sciences
  • Kashyap Thumar added an answer:
    7
    What is the safety level of extractable and leachables ?

    Through my research some extractables and leachables were found from the pharmaceutical products by LC-MS/MS. So, How can I correlate toxicological assessment, If Safety level are there for Human ?? 

    I have go through given leachable components...

    They are...

    1) Di-methyl phthalate (DMP)

    2) Di-ethyl phthalate (DEP)

    3) Di-butyl pthalate (DBP)

    4) diethylhexyl-phthalate (DEHP)

    Kashyap Thumar

    Thanks

  • Sriram R added an answer:
    5
    MTT data interpretation on flukes

    In MTT assay with incresing exposure time and dose of drugs, the O.D. values increases in 5,10,25 and 50 mg/ml of drugs but decreases with 100 and 200 mg/ml drugs in every hour upto 4 hour. What does it signify? Drugs: Plant Extracts and experiment carried ut in flukes.

  • Gobi Narayanan added an answer:
    2
    What is the Integrated Bio-marker response? How to use this method in toxicology risk assessment? What is the use of this method in Eco-toxicology?

    What is the Integrated Bio-marker response? How to use this method in toxicology risk assessment? What is the use of this method in Eco-toxicology?

    Gobi Narayanan

    Dear sayed

    Thank your for valuable answer.

    Then i want one more clarification. There is Integrated bio marker response is used as a measurement of different bio markers. Then how to use this calculation for the measurement of all the bio-markers. what is the equation for use this integrated bio marker response? how to use the equation? what is the purpose of this calculation?

  • Nwonuma Charles asked a question:
    Open
    Can I get materials, jornal papers or links that can help in learning and mastering the use of PyMOL ?

    I need the the latest application of the software application for the antimalarial principle identification in my study. I need more enlightenment on the usefulness in toxicological studies

  • Noeman Ardalan added an answer:
    35
    Can we use DMSO as a safe solvent to dissolve curcumin for oral administration?
    Is DMSO safe for mice since I need to administer curcumin orally to them by dissolving it in DMSO.
    Noeman Ardalan

    DMSO is toxic in high concentration- you must dilute it 1000 fold for drug solvent.

  • M.Farhanullah Khan added an answer:
    5
    Can I used lead as lead acetate instead lead sulphate?

    I am working on phytoremidation of  Lantana camara to heavy metal by tissue culture technique

    M.Farhanullah Khan

    Dear Dr.Uthpala Jayawardena because of its high dissociation value toxicity of lead acetate is higher  lead sulfate.  

  • Frieda Mah added an answer:
    3
    How can I prevent insect hemolymph from coagulation?

    How can I prevent insect hemolymph from coagulation?

    Frieda Mah

    If severe bleeding, more hands may be needed. Universal energy does activate yang qi.

  • Joao Laureano added an answer:
    30
    Does anyone use urethane as the anesthesia for rats?
    Yes, urethane can induce a long lasting and deep level of anesthesia, but my problem is that it take a long time to induce the anesthesia, even if I use the dose 1,2 g/kg IP for rats. Does anyone have experience with this problem and maybe could help or give advice?
    Joao Laureano

    Does the Anesthetic Urethane Influence the Pharmacokinetics of Drugs?

  • Hadeel Albayati added an answer:
    6
    How Ican measure calcium&phosphore in bone of broiler?

    How can measure the mineral in bone in lab?

    Hadeel Albayati

    https://www.ncbi.nlm.nih.gov/pubmed/22225247

  • Hany Mostafa added an answer:
    2
    Estimation of mushrooms production/availabilty

    How do you plan to estimate the availability/production of mushrooms in Finnish forests? by using models? what sort of models?

    Hany Mostafa

    Check the following

    http://file.scirp.org/pdf/AiM_2014011315223073.pdf

    www.nrcmushroom.org/book-cultivation-merged.pdf

    www.cals.uidaho.edu/edcomm/pdf/cis/cis1077.pdf

    https://www.usitc.gov/publications/332/ITS_7.pdf

    https://www.mushroomcompany.com/resources/background/attramushroom.pdf

  • Lochan Singh added an answer:
    4
    How can I assess toxicity for PAHs compounds showing a merged peak or combined peak?

    Hi everyone,

    I have seen papers on PAHs determination where in chromatographs they represent combined peak or data for 2 compounds, for example, IP+B(ghi)P, Fluaranthene+Phenanathrene etc. I am wondering how to use this combined data for calculating BaP toxicity equivalents and for risk assessment. Will the toxicity factor of the two compounds will be averaged or are there any other values provided in literature for combined assessment of PAHs compounds? I request you to kindly guide me about this. Thank you.

    Lochan Singh

    Thank you sir. I found that in case of fluoranthene and phenanthrene the RPV of PHEN is 0. But it makes me wonder what I should do with other combined peaks like 

    1) BaA + Chry

    2) Ind + BghiP

    3) FLU + ACP

    Should i consider that complete peak of the compound with high RPF or TEF? Though i will mention the assumptions made for risk assessments in my work as suggested by you. Sir, I would also like to know how  RPF differs from TEF? Please provide me some notes which could help me understand and clarify these doubts. I would be very much thankful to you.

  • S Mohammad Ebrahimi added an answer:
    2
    “the NIOSH 8301” ; Is this method is not obsolete? Could you please introduce me faster and more reliable methods?

    NIOSH 8301

    faster and more reliable methods

    toluene and xylene

    Hippuric acid and Methyl Hippuric acid

    S Mohammad Ebrahimi

    Dear Dr Azari i really appreciate your concern 

  • Ollor Ollor added an answer:
    5
    Can anybody suggest some new emerging contaminants of water to work on toxicology other than Triclosan ?

    I am interested to study the effects of some new emerging contaminants of water for toxicological analysis using fish. I want to find some contaminats that are environmentally relevent and not much explored.

    Ollor Ollor

    The presence of soots generated from the burning of hydrocarbons and waste from Petrol

  • Fatemeh Hemmati asked a question:
    Open
    Just I'm looking for 6-pack toxicology testing list. According to OECD. Last version.?

    Hi 

  • Qin Xiang Ng added an answer:
    1
    Can you help me to identify this problem in strawberry and suggest its remedial measures?

    Is it Phylloidy..

    Qin Xiang Ng

    Hi,

    It appears to me that the “seeds” of the strawberry are germinating green shoots. This could be vivipary, which occurs frequently in some plants, but less commonly in others, like the strawberry. Viviparous plants produce seeds that germinate immediately while still attached to the plant. This is often related to endogenous hormones especially, abscisic acid (ABA). The growing conditions of your cultivar could have caused this.

    Good luck!

  • Susana P Pereira asked a question:
    Open
    Should we talk about carbohydrate toxicology?

    Since  2010 we are witnessing a change in the nutrition paradigm. I wonder if would it not be important to quantify the harmful effects of an excess of carbohydrates, especially its effects during pregnancy?

  • Ali Ghazi added an answer:
    2
    What is the definition of malanization in biology?
    Some toxicants can affect the malanization process in arthropods and consequently their immunity will be decreased.
    Ali Ghazi

    it is mean Conversion into melanin, or an increase in the concentration of melanin within (a tissue or organism)

  • Jasenko Karamehic added an answer:
    9
    Is that correct to compare the dissolution test of a drug with drug release in the gut ?

    As a part of my research I am planning to do a dissolution test to see the active drug release from folic acid tablet and to see the effect of storage on active drug release. i would like to know by giving the controlled conditions (temperature and pH as in the gut) in-vitro, to dissolution test can i discuss the drug release in the gut? is this correct way to discuss the drug release in the body?

    Jasenko Karamehic

    Very curious question correct and very professional answers from which I learned a lot!

  • Rex FitzGerald added an answer:
    14
    How could I derive NOAEL and LOAEL from dose-response data?
    Theoretical basis and suitable software if available (the free ones are warmly welcome!)
    Rex FitzGerald

    Use Benchmark Dose Software (BMDS) from US EPA

    https://www.epa.gov/bmds

    (The Benchmark Dose is the preferred regulatory method for dose-response analysis.)

  • Angad Patole added an answer:
    2
    What is the methodology for conducting the brine shrimp lethality assay ?

    looking more specifically on the diagrammatic presentation of the methodology

    Angad Patole

    hatch brine shrimps in artificial see water after 24 hours they will convert it into active naupili (tiny shrimps), take out ten in each tes tube with concentration of drug ( in tripicate) count mortality of naupili  (non active naupili is dead) of naupili against black and white background sepateley calculate IC50

  • Oluwatosin Kennedy Oko added an answer:
    16
    How long can extracted water samples (SPE) in methanol be stored and at what temperature?
    I have been extracting organic compounds of my water samples using solid phase extraction (SPE) and evaluating them through various bioassays. I have many different tests to do and I have to keep the extracted samples for sometime. I am currently storing them at 4 degree Celsius and the solvent I used for elution was methanol. Does anyone know how long they can be stored and at what temperature condition?
    Oluwatosin Kennedy Oko

    Due to the volatility of the solvent, shorter storage length, I think is required to maintain the efficacy of the extract.

  • Sarwar Mohammed Sadq added an answer:
    4
    How many the limited concentration of Aflatoxin, Ochratoxin, T-2 toxin and Zearalenone (ppb) for feeding fish?

    How many the limited concentration  of Aflatoxin, Ochratoxin, T-2 toxin and Zearalenone (ppb) for feeding fish ?

    Sarwar Mohammed Sadq

    Dear Dr. Nasreen ,

    Many thanks for your attachments. 

  • Saiful Islam added an answer:
    6
    What is the earth crust value for Fe (in unit of mg/kg)?

    I have found ucc value for Fe (from Rudnick & Gao 2004) is 4.09 wt%. but how can I convert it into mg/kg unit?

    advance thanks for response and precious time.

    kind regards.

    Saiful Islam

     Dear Dr. Ketil Haarstad,

    A lot of thanks.

    kind regards

  • Ata Rafiee added an answer:
    4
    How can I measure the inhaled dose of toxins in humans due to consumption of one cigarette?
    I have to perform a toxicokinetic study of urinary metabolites but I need to know the dose of toxins that people absorb when they smoke a cigarette.
    Ata Rafiee

    Dear Dr. Barbeau

    Along with chemical characterization of the product and estimation of the yield of toxicants from the product in use, measurement of biomarkers of exposure to tobacco toxicants will play an important role in the evaluation of any new types of tobacco product aimed at reducing smokers’ exposure to toxicants.

    polycyclic aromatic hydrocarbons (PAH) and tobacco-specific nitrosamines, typified by 4-(methylnitrosamino)-1-(3-pyridyl)-1-butanone (NNK), are widely considered to be among the most important causative agents for lung cancer.

  • Rosario Diaz-Gonzalez added an answer:
    2
    How to decide the normalisation rate in an EC50 shift assay?

    I am working on drug target identification using an overexpression (OE) Library. The approach relies on the calculation of drug EC50 shift among OE cell lines.  I am dealing with the issue that in some cases, the OE seems to be toxic to the cells, affecting the cell growth rate.

    The workflow used was based on the normalisation of the data considering positive and negative control points and posterior analysis using GraphPad Prism to calculate the EC50 using nonlinear regression (log Agonist vs normalised response).

    Once I have normalised the data considering controls, the OE cell line shows a top value about 160-200% of survival (Somehow,  in low concentrations, the drug-target interaction actually blocks the toxicity of the target OE and then these points have more cells rather the control (just OE cells), and subsequently the percentage of survival is greater at these points.

    GraphPad gives the option of fitting the dose-response curve normalising the data again, constraining the curve to run from 0 to 100%.

    The problem is that with the double normalisation the results are different if I compare it with a single normalisation considering controls, and not fitting the curve again for a range 0-100. Thus, I wonder how many times should I normalise the data to adapt the slope of the curve facing the different behaviour of the points according to cell growth.

    Rosario Diaz-Gonzalez

    Hi!

    I would recommend to set up your normalization and later analysis using a couple of tool compounds as positive and negative controls. I.e., a regular cell  inhibitor which mechanism of action is not involved with your overexpression target would not be likely shifting your EC50 values neither the curve slope; the other way round, using a pan-killer of your desired target would give you the expected shift.

    Once you have established the proper way to analyze your data, then you can proceed your analysis with confidence.

    All the best!

  • Ali Darvishzadeh added an answer:
    1
    What is differences between EC formulation and EW formulation?

    EW is better solution or EC formulation?

    Ali Darvishzadeh

    EW is better solution or EC formulation?

  • Ahmed Harbya asked a question:
    Open
    A Book in "Toxicology in a Box by Brian Kloss & Travis Bruce", I can't find any soft copy on internet. could anyone send me it please?

    This is my email

    ahmedhusain.ahmed@pharma.asu.edu.eg

  • Ian J Martins asked a question:
    Open
    Is drug induced mitochondrial toxicity involved in the induction of global chronic diseases?

    REFERENCE

    “Drug-Drug Interactions with Relevance to Drug Induced Mitochondrial Toxicity and Accelerated Global Chronic Diseases”. EC Pharmacology and Toxicology 3.1 (2017): 18-21.

  • Friedrich Dellmour added an answer:
    1
    Is curcumin degradable by silver nanoparticles?
    1. Is silver nanoparticle in doses of 100 and 200 micromole intraperitoneal suffient to induce toxicity without killing the rats?
    2. Can curcumin be used as hepatoprotective for liver injury induced by silver nanoparticles. Does curcumin degrade in presence of silver nanoparticles?
    Friedrich Dellmour

    1. You should discuss these questions with the author :)

    2. Some data: 100 micro mole silver are 10.8 mg nano-silver particles. According to (Silver Nanotechnology Working Group. Re: Silver Nanoparticles (AgNPs); Information and Common Request. CDC-2012-0014; NIOSH-260. Comments of the Silver Nanotechnology Working Group for review by the National Institute for Occupational Safety and Health (NIOSH). February 2013), ORAL NOAEL in rats is 30 mg nano-silver/kg/day. Considering 250 g per adult rat, this is 7.5 mg nano-silver /kg/day, which caused no observational effects after oral intake. However, I do not know the relevance for intraperitoneal application.

  • Laís Lopes added an answer:
    4
    Does anybody have Parcom or APHA 1992 ,toxicology protocols using Acartia tonsa as their bioindicator?

    I am just looking for some toxicology protocols using Acartia tonsa as their bioindicator. Does anybody have Parcom or APHA 1992, or ASMT protocols too? I would appreciate! Because I need some details of their methodology!

    Laís Lopes

    Thank you Thang!!!

  • Manikant Tripathi added an answer:
    3
    Dear colleagues please suggest me any emerging or recent topic of Toxicology in water? Also, requires guest editors for a upcoming special issue?

    Invited as lead guest editor for special issue in Journal of Toxicology. In this context, I wish your help in topic selection. 

    Manikant Tripathi

    Thank you everyone

  • Rosa M Corrales added an answer:
    8
    Can someone help me to find any toxicology information about 4-(butylamino)benzoic acid and 4-(amino)benzoic acid?

    I need to find toxicology information about 4-(butylamino)benzoic acid and 4-(amino)benzoic acid

    Rosa M Corrales

    Thank you

  • Matthias Herzler added an answer:
    5
    n

    need answer 

    Matthias Herzler

    In Europe, OECD methods are translated into "EU test methods". Upon adoption they are included in annexes to Regulation (EC) 440/2008 (latest consolidated version: http://eur-lex.europa.eu/legal-content/EN/TXT/?uri=CELEX:02008R0440-20160304). You will find ample guidance on selection and interpretation of appropriate tests in the REACH guidance documents, specifically here: https://echa.europa.eu/guidance-documents/guidance-on-information-requirements-and-chemical-safety-assessment.

  • Joaquin Navajas Acedo added an answer:
    3
    How long following my last tamoxifen injection will the tamoxifen still reside within the mouse, activating cre recombinase?

    I am hoping to perform a lineage trace for a specific cell type, so the timing of Cre activation is very important. I have heard conflicting reports where some people claim tamoxifen will be cleared from the mouse by 4 days following the final injection while others believe it takes several weeks. Have any toxicology studies been performed to determine the timing of tamoxifen clearance in mice (mine are on a C57B6 background) and could someone provide a link to that study if it exists? I've had no luck finding anything. Thank you!

    Joaquin Navajas Acedo

    I think in addition to the literature, you could use antibodies to check for Cre expression, so you would know 1. how long does the expression last for and 2. how many cells express Cre vs how many cells express your transgene.

    Hope this helps!

  • Suresh K Malhotra added an answer:
    2
    Who are the best plant/tea food science or toxicology experts I could consult about new derivative ingredients for beverages and FDA GRAS filings?

    Who are the best plant/tea food science or toxicology experts I could consult about new derivative ingredients for beverages and FDA GRAS filings?

    Suresh K Malhotra

    You may consult Central Food technology Research Institute, Mysore India and Tea Board.

  • Rick D. Cardwell added an answer:
    18
    What are some software/tools for LC50 determination using the probit or trimmed Spearman-Karber method?
    I' d like to calculate lethal concentration (LC50) or effect concentration (EC50) in our study with daphnids. The US EPA suggest to derive values using both the probit method and the trimmed Spearman-Karber method. Do you know if there is a (free) software or an R code to perform these analyses?
    Rick D. Cardwell

    Recommend everyone who runs aquatic toxicity bioassays to include the TRAP program.   It is free and will provide both good insights as to goodness-of-fit about your data as well as LC50s, etc.  It can be downloaded here: https://archive.epa.gov/med/med_archive_03/web/html/trap.html

  • Tope Atere added an answer:
    2
    How can I calculate the optical density of supernatant and pellets using DNA fragmentation?
    Diphenylamine (DPA) assay:
    DNA fragmentation in liver tissue will be carried out according to Perandones et al. (1993).


    Principle:
    A quantitative method was raised to determining % of fragmentation of known amount of DNA into oligosomal-sized fragments, where DPA form reaction at bond between purines and deoxyribose which is liable forming liberation of inorganic phosphate and provides the substrate (Schiff base) blue color which is measured calorimetrically at 600nm.
    Reagents:
    1-Hypotonic lysis buffer PH8:
    - 0.2% Triton X-100.
    - 10 mM Tris.
    - 1 mM EDTA.

    2-TE (Tris EDTA) buffer:
    -10 mM Tris HCl(PH8).
    -1 mM EDTA(PH 7.4).
    3- 10% Trichloroacetic acid (TCA 10%W/V): 100gm of TCA were dissolved in distilled water and completed up to 1000ml.
    4- 5% Trichloroacetic acid (TCA 5%W/V): 50gm of TCA were dissolved in distilled water and completed up to 1000ml.
    5- Colorimetric solution:
    - 1.5 gm DPA in 100ml glacial acetic acid (98%V/V).
    - 1.5 ml sulfuric acid (98%V/V).
    - 0.5%V/V of 1.6% acetaldehyde.
    Procedure:
    1- The liver tissue (40 mg) was mechanically dissociated in 400 µl hypotonic lysis buffer to obtain cell lysate.
    2-Incubate at 50 °C for 2.5 hrs.
    3-The cell lysate was centrifuged at 13.800xg for 15 minutes.
    4-The supernatant (SN), that was contained small fragments of DNA was separated immediately.
    5-Acid extraction of DNA:
    - The pellet redisolved in TE to be homogenous prior to centrifuge to ensure adequate separation of fragmented DNA from intact DNA.
    - Equal volume of 10% TCA was added to both supernatant and pellet.
    - Incubation for 15 min at room temperature.
    - Centrifugation at 2000rpm for 10 min.
    - The periceptate was resuspend in equal volume of 5%TCA.
    - Incubation at 100 °C (boiling water bath) for 10 min.
    - Centrifugation at 1500 rpm for 15 min.
    - The supernatant containing the extracted DNA was left to cool at room temperature.
    6-Colorimetric determination of DNA content :
    - Two volumes of colorimetric reagent were added to one volume of the extracted DNA (small and large fragments), kept at 30 c overnight till blue color is developed.
    7- The developed blue color was quantified spectrophotometrically at 600 nm.



    Does anyone have the method in more detail? How can I obtain optical density of supernatant and optical density of pellets?
    Tope Atere

    Check out this link it might answer your question: http://www.cyto.purdue.edu/archive/flowcyt/research/cytotech/apopto/data/chap9.htm

  • Devesh Tewari added an answer:
    3
    What is the meaning of " Ratio of tested botanical doses compared with daily doses in ethnobotanical practice"?

    Pharmacology and Toxicology

    Devesh Tewari

    Dear Dr Kaushal 

    I think the calculation of dose is a challenging task in the ethomedicinal practice and needs a proper scientific standardization. The traditional healers generally provide a randomized dose depends upon the situation. In my opinion, It is better to find out the dose by some safety and toxicity studies (LD50, ED 50 etc), and if the botanical preparation is well established then you can go for the calculation of the ratio by the proven established dose and the dose given by a folk practitioner, but the chances of errors may be there.  

  • Heba nasr nasr asked a question:
    Open
    What are the parameters of toxicokinetics?

    i wanna know the parameters that i have to take it in the case we need to test the toxicokinetics of a pesticide or poison after administration with single oral dose in rats

  • Ilya B. Tsyrlov added an answer:
    1
    How many passages are possible for mouse fetal hepatocytes FL83B line taken from ATCC?

    We plan this line for toxicology studies of antidotes. Does anyone have experience with these hepatocytes? Thank you for answers.

    Ilya B. Tsyrlov

    Hi Iwona,

    Telling it shortly - 4 to 6 passages.

    In more details - the base medium for this cell line is ATCC-formulated F-12K Medium. To make the complete growth medium, add the following components to the base medium: fetal bovine serum to a final concentration of 10%. Subculturing Volumes used in this protocol are for 75 cm2 flask; proportionally reduce or increase amount of dissociation medium for culture vessels of other sizes. How to remove and discard culture medium: briefly rinse the cell layer with 0.25% (w/v) Trypsin-0.53 mM EDTA solution to remove all traces of serum that contains trypsin inhibitor. Add 2.0 to 3.0 mL of Trypsin-EDTA solution to flask and observe cells under an inverted microscope until cell layer is dispersed (usually within 5 to 15 minutes). Note: To avoid clumping do not agitate the cells by hitting or shaking the flask while waiting for the cells to detach. Cells that are difficult to detach may be placed at 37°C to facilitate dispersal. Add 6.0 to 8.0 mL of complete growth medium and aspirate cells by gently pipetting. Add appropriate aliquots of the cell suspension to new culture vessels. Incubate cultures at 37°C. Medium Renewal: 2 to 3 times a week. About cryopreservation: Freeze culture medium, 95%; DMSO, 5%. Storage temperature: liquid nitrogen vapor phase. And finally, culture conditions: Atmosphere: air, 95%; carbon dioxide (CO2), 5%. Temperature: 37°C.

    Best wishes,

    Ilya

  • Anna Blagaia added an answer:
    2
    Toxicology profile of diamides?

    Im researching the above and do not understand the dose response graph supplied (See file attached)  or the following statement made in respect to the following:

    "Chlorantraniliprole exhibits few to no acute toxicological effects following single doses as high
    as 5000 mg/kg and following repeated doses as high as the limit dose (1000 mg/kg). The only
    consistent findings in feeding studies with chlorantraniliprole has been a mild and slight increase (approximately 20% from control) in liver weight observed in the subchronic oral rat, mice, and dog toxicity studies and the rat 2-generation reproduction study.

    This observation is considered a physiological response to metabolism. Other findings include a slight reduction in body weight gain at the high dose in a 28-day dermal toxicity study in rats and a slight reduction in F1 pup but not F2 pup weight during lactation at a high dose level of 20,000 ppm when the P1 females received dietary doses equivalent to 3118 mg/kg/day.

    This change in F1 pup weights was without subsequent effects post-lactation since overall weight gains and development in the F1
    rats fed 20,000 ppm were similar to control animals.

    The only other consistent, treatment related observation across the mammalian toxicology
    studies (reported primarily in male rats) was an increased degree of microvesiculation of the
    adrenal cortex after dermal or dietary administration of chlorantraniliprole.

    This histologic change was observed in several rat studies including a 28-day dermal study, a 90-day oral study, a multigeneration reproduction study and at the 1- and 2-year intervals of a 2-year chronic study.

    The histologic grading of increased microvesiculation in affected groups was mild. While
    clearly treatment related, the slight microvesiculation of the adrenal cortex is not considered toxicologically significant.

    The effects noted in the EUP toxicology database are not toxicologically significant adverse
    effects, and do not indicate a hazard concern.

    Subsequently, risk assessments have not been
    conducted.

    However, in order to characterize exposure in light of the information provided in the toxicology database, exposure has been estimated and compared to the limit doses in the mammalian toxicity studies."

    Does any of this take into account long term studies of accumulative toxicity?  

    Also as this chemical affects the ryanide receptors causing a flooding of calcium how would that be assessed in vitro against human cells ie what cells would be utilised and is there such an assay available?  And if no testing was done in this respect why?

    Anna Blagaia

    and http://onlinelibrary.wiley.com/doi/10.2903/j.efsa.2013.3143/pdf

  • Richard E. Haas added an answer:
    2
    Stability of extempore sterile compounded 3% Hypertonic Saline

    Reference for the number of days a 500ml preservative-free bag of 3% hypertonic saline would be stable if compounded under sterile conditions. 

    Richard E. Haas

    There is one example in the veterinary literature, I do not know how generalizable you might find it to your issue

    Journal of the American Association for Laboratory Animal Science

    Assessment of Sterility in Fluid Bags Maintained for Chronic Use

    Vol 50, No 5 September 2011 Pages 708–712

    Kristin A Matthews1,* and Douglas K Taylor1,2

    Good luck!

    Rich

  • Aruna Devi asked a question:
    Open
    I have calculated dpa from the above mention formula but my dpa value is different from paper .please tell me correct way for dpa calculation

    How can I calculate correct dpa

  • Andem Bassey Andem added an answer:
    1
    What are the processes involved in analyzing biochemical enzymatic alterations of fish?

    I am looking at toxicological effect of a name pesticide on histopathology and catalytic activities of a named fish species

    Andem Bassey Andem

    Depending on the type of enzyme you are looking at, these are some of the biochemical processes/methods;

    Biochemical analysis

    At the end of the exposure period, fish will be sacrificed by medullar transaction (Luckey, 1977) and dissected within 3 min on ice. Liver will be washed in ice cold 1.15% kcl solution, blotted dry and weighed separately. Total protein will be estimated  according to Lowry method (1951) using bovine serum albumin as a standard.

    Superoxide Dismutase (SOD) Assay: Superoxide Dismutase (SOD) activity will be determined by measuring the inhibition of autoxidation of epinephrine at pH 10.2 (30 °C) as described by Magwere et al. (1997).

    Catase (CAT) Assay: Catalase activity (CAT) will be determined according to the procedure of Clairborne (1995) following the absorbance of hydrogen peroxide at 240nm, pH 7.0 and 25 °C.

    Reduced Glutathione (GSH) Assay: Reduced glutathione (GSH) will be determined in the 10,000 g supernatant fraction of the liver of C. gariepinus according to methods described by Jollow et al. (1974), using 5,5’-dithio-bis-2-nitrobenzoic acid (DTNB) and Tris-EDTA buffer with the absorbance being read at 412nm.

    Glutathione S-Transferase (GST) Assay: Glutathione S-transferase (GST) activity will be determined by the method of Habig et al. (1974) using 1 chloro 2,4 dinitrobenzene as substrate. The reaction mixture (3 ml) contained 1.7 ml of 100 mM phosphate buffer (pH 6.5), 0.1 ml of 30 mM CDNB. After preincubating the reaction mixture at 37°C for 5 min, the reaction was started by the addition of 0.1 ml diluted sample and the absorbance was followed for 5 min at 340 nm. Reaction mixture without the enzyme was used as blank. The specific activity of glutathione S-transferase is expressed as nmoles of GSH-CDNB conjugate formed/min/mg protein using an extinction coefficient of 9.6 mM-1cm-1.

    Malondialdehyde Formation (MDA) Assay: Lipid peroxidation will be determined by measuring the Thiobarbituric Acid Reacting Substances (TBARS) as described by Farombi et al. (2000). Malondialdehyde (MDA) will be quantitated by using extinction co-efficient of Σ = 1.56 × 105 M-1 cm-1 (Buege and Aust, 1978).

    Liver enzymatic Assays

    Alkaline Phosphatase (ALP) Assay: The activity of Alkaline phosphatase (ALP) will be measured at 410 nm in a spectrophotometer according to the method described by Alkahem  Al-Balawi et al. (2011).

    Aspartate Aminotransferase (AST): AST will be determined in the 10000 g supernatant fraction using 2,4 dinitrophenyl hydrazine with the absorbance being read at 412 nm as described by (Abei, 2004).

    Alanine Aminotransferase (ALT): The level of Alanine aminotransferase (ALT) will be at 413 nm using spectrophotometer as described Bergmeyer et al. (1978).

  • iA Ia added an answer:
    33
    How can I get consistent results in a MTT assay?
    I performed an MTT assay for the synthetic dye on L929 and MDA breast cancer cell line. Initially incubation was the cells in 96 well plates for 24 hrs followed by dye treatment for 24 hrs after washing the wells with sterile PBS. After 24 hr treatment the media was removed and then MTT was added and incubated for 4 hrs. But results are not up to the mark.
    iA Ia

    Thanks Deepkamal.

  • Víctor Acosta Chaves added an answer:
    6
    Do you know who can supply us the Costa Rican coral snake venom?

    Hello,

    We are interested in Costa Rican coral snake venom and in Texas coral snake (Micrurus tener tener) venom. Could you produce them for us? What will be the quotation for those venom? Could you recommend us a snake farm that have that kind of snakes?

    Thanks and Best Regards,

    Laura Feldman

    • Source
      [Show abstract] [Hide abstract] ABSTRACT: American Elapid snakes (Coral Snakes) comprise the genera Leptomicrurus, Micruroides and Micrurus, which form a vast taxonomic assembly of 330 species distributed from the South of United States to the southern region of South America. In order to obtain venom for animal immunizations aimed at antivenom production, Coral Snakes must be kept in captivity and submitted periodically to venom extraction procedures. Thus, to maintain a snake colony in good health for this purpose, a complete alternative diet utilizing an easily obtained prey animal is desirable. The development of a diet based on fish is compared to the wild diet based on colubrid snakes, and assessed in terms of gain in body weight rate (g/week), longevity (weeks), venom yield (mg/individual), venom median lethal dose (LD₅₀) and venom chromatographic profiles. The animals fed with the fish-based diet gained more weight, lived longer, and produced similar amount of venom whose biological and biochemical characteristics were similar to those of venom collected from specimens fed with the wild diet. This fish-based diet appears to be suitable (and preferable to the wild diet) to supply the nutritional requirements of a Micrurus nigrocinctus snake collection for the production of antivenom.
      Full-text available · Article · Apr 2012 · Toxicon
  • Mihai Ionica added an answer:
    6
    What is the best method for testing benzoylecgonine in urine?
    Please could somebody send me a reference?
    Mihai Ionica

    Liquid-liquid extraction and analyzed by GC MS system.
    Very simple. I use currently.
    Good luck with that.

    Mihai Ionicã

  • Alex Dawson added an answer:
    3
    Can Chlorpyrifos be stored in Acetone?

    I intend to use Chlorpyrifos for chronic exposure experiments with C. elegans. I wondered if anybody has experience of how long it can be stored for when mixed in acetone, and if there are any other considerations (e.g. freezing, keeping it away from light etc.).

    Thanks in advance,

    Alex

    Alex Dawson

    Hi Fiona and Robert, 

    Thank you both!

    Alex

  • Tarek ABD EL AZIZ added an answer:
    1
    In which solution snake venom should be stored after extracting venom from the snake glands?

    Toxicology etc In which solution snake venom should be stored after extracting venom from the snake glands?

    Tarek ABD EL AZIZ

    The best way to store animal venoms by lyophilize it or store it in the same shape after extraction at -80°C.

  • Farzaneh Safary added an answer:
    8
    How does formaldehyde convert bacterial toxins into toxoids(inactive toxoids) and what type of reaction occurs?
    Formaldehyde is actually used in converting toxins to toxoids in order to prepare vaccines.
    Farzaneh Safary

    hello , I have a question, how  is formaldehyde cause tissue stabilization?how happen is doing? thanks.

  • Leona D Scanlan added an answer:
    1
    What would you consider to be the advantages and disadvantages of using transcriptomics to assess the physiological stress?

    I'm wanting to establish a table of pros and cons on the use of transcriptomic on physiological stress. I've always used transcriptomics as a way of determining sublethal thresholds in toxicology, or establishing conditions at which organisms become "stressed" be that they may recover or not. I'm particularly interested in views from outside the toxicological field, but not exclusively. Thank you!

    Leona D Scanlan

    Pros: fairly easy, reproducible, can assay thousands of endpoints at once, tells a snapshot of a specific time period in the cell/tissue/organism. GO/KEGG is advancing so there is more identity than there used to be, very sensitive, also specific.

    Cons: still just RNA, not protein, not metabolites (although there was that one paper that showed transcripts correlate well with ultimate outcome.. what paper was that..), downstream data analyses can be different and find different results, that amount of data generated can be overwhelming, requires a lot of storage space and someone who can manage/analyze it. Maybe too sensitive -- what is the biological meaning of a differentially expressed gene?

  • Gamal El Ghazali added an answer:
    11
    What is the difference between toxin and poison?
    What is the difference between toxin and poison?
    Gamal El Ghazali

    a poison is a substance that, in substantial amount, produces adverse health effects by causing injury, illness, or death, when ingested, inhaled, absorbed or injected into the body of the organism. poisons may be environmental pollutants, household products, pesticides, industrial chemicals, food additives, drugs or natural toxins. 

    on the other hand, a toxin, a more specific term, is any of various poisonous substances that are specific products of metabolic activities of the living organisms. the terms poisonous and toxic, although are quite unique, a distinction between them is not always observed and are regarded as synonyms.

  • Mawiyah Mahmud added an answer:
    39
    How do we calculate the IC 50 value in antioxidant assays?
    How do we calculate the IC 50 value in antioxidant assays?
    Mawiyah Mahmud

    Thank u Mr Punit R Bhatt for help. Best luck to u too.

  • Gamal El Ghazali added an answer:
    3
    Is there any poisonous plant in your country? Do you heard about any animal or human loss by consumption of that plants?
    Plants cannot move to escape their predators, so they must have other means of protecting themselves from herbivorous animals. Some plants have physical defenses such as thorns, but by far the most common protection is chemical. Over millennia, natural selection has produced a complicated and vast array of chemical compounds that deter herbivores.
    Gamal El Ghazali

    Poisonous plants are part of our ecosystems and as you have said have various means to protect themselves. Poisonous plants are not always harmful, but a quite number have positive physiological effects (medicinal) not only for human beings but also for livestock. please follow my profile to review my various contributions in this respect. Regards. 

  • Tom Wenseleers added an answer:
    4
    Which is the best package for analysis of pharmacokinetic data using R?
    Pharmacokinetic analysis using R software.
    Tom Wenseleers

    There is also a new package RxODE, https://cran.r-project.org/web/packages/RxODE/vignettes/RxODE-intro.html, that looks promising!

  • Michael Dale Ludwig added an answer:
    1
    What is the durability of MOG pepide-adjuvant emulsion?

    Hi. Im workin on EAE induction in C57BL/6 mice. Im gonna pepare MOG-adjuvant emulsion but i don’t know the storage conditions of it. Some papers suggest storage duration for severeal days but i may need to use it later. Is there anybody experiencing with the durability of MOG-adjuvant emulsion used for EAE induction in mice? How long can it be stored and what is the optimum temperature?

    Michael Dale Ludwig

    Hello!

    Quite honestly, I've never stored my emulsions. I typically use mine within hours of making it. If the emulsion sits for too long it will eventually come out of solution. Plus I would seriously begin to question the disease inducing ability of the emulsion if it was stored for more than a few hours. I would recommend making up what you need for that day's injection (plus a little extra), and using that emulsion up that same day. Then when you need the emulsion again, you make it fresh. 

  • Ambika Prasad Patra asked a question:
    Open
    What is procedure for indexing a peer-reviewed medical journal and what are the pre-requisites for indexing a journal?

    Currently, i am joint editor of a 12 year old peer-reviewed Toxicology journal which belongs to Indian Society of Toxicology. As it is a non-profit organisation in India, the journal though have a brilliant pool of scientific papers is yet to be indexed by some popular indexing agencies. 

  • Ali A R Aldallal added an answer:
    3
    Which is best statistical model for randomization in respect to animal studies?

    Pls discuss, stratified randomization and excel method leads to accumulation of  group having all the less body weight animals

    Ali A R Aldallal

    Abstract
    Experiments involving neonates should follow the same basic principles as most other experiments. They should be unbiased, be powerful, have a good range of applicability, not be excessively complex, and be statistically analyzable to show the range of uncertainty in the conclusions. However, investigation of growth and development in neonatal multiparous animals poses special problems associated with the choice of “experimental unit” and differences between litters: the “litter effect.” Two main types of experiments are described, with recommendations regarding their design and statistical analysis: First, the “between litter design” is used when females or whole litters are assigned to a treatment group. In this case the litter, rather than the individuals within a litter, is the experimental unit and should be the unit for the statistical analysis. Measurements made on individual neonatal animals need to be combined within each litter. Counting each neonate as a separate observation may lead to incorrect conclusions. The number of observations for each outcome (“n”) is based on the number of treated females or whole litters. Where litter sizes vary, it may be necessary to use a weighted statistical analysis because means based on more observations are more reliable than those based on a few observations. Second, the more powerful “within-litter design” is used when neonates can be  individually assigned to treatment groups so that individuals within a litter can have different treatments. In this case, the individual neonate is the experimental unit, and “n” is based on the number of individual pups, not on the number of whole litters. However, variation in litter size means that it may be difficult to perform balanced experiments with equal numbers of animals in each treatment group within each litter. This increases the complexity of the statistical analysis. A numerical example using a general linear model analysis of variance is provided in the Appendix. The use of isogenic strains should be considered in neonatal research. These strains are like immortal clones of genetically identical individuals (i.e., they are uniform, stable, and repeatable), and their use should result in more powerful experiments. Inbred females mated to males of a different inbred strain will produce F1 hybrid offspring that will be uniform, vigorous, and genetically identical. Different strains may develop at different rates and respond differently to experimental treatments.

  • Bruce Neagle added an answer:
    1
    Has anybody done qualitative analysis of CMP slurry ?

    I am looking to do qualitative analysis (chromatography) of colloidal silica but the HPLC results basically showed no peaks.

    Could someone please help me with that ?  

    Bruce Neagle

    Silica is used as a 'normal phase' stationary phase and has no significant UV-Vis spectrum.  Use the AOAC colormetric method for Silicon which if I recall uses Antimony.

  • Pachava Vengal Rao added an answer:
    2
    Which the concentration of DMSO is safe to L929 cells?

    I am performing assessment of compound toxicity ( the highest concentration 0.25mg/mL) and I use :  100% Dimethyl sulphoxide (DMSO) as a solvent. The final concentration of DMSO in the media was 1%.  However, this percentage affected the cells (L929). I have diluted DMSO  down to 20% by H2O to get a save concentration (0.2%), but this concentration was not able to solve the copound. Is there way to dilute the DMSO and at the same time keep the compound concentration at 0.25 mg/mL.

    Pachava Vengal Rao

    DMSO is highy toxic ultimately it will show toxic effect on cells. In order to to solubulize your test compound first dissolve the test compound in little quantity( known volume) of 100% DMSO and finally make the volume to the required conc. in your case 0.25mg/ml with with distill water in such away that final you should be able to get 1ml of 0.1% DMSO containing 0.25mg  of your test item

  • Quentin Schenkelaars added an answer:
    2
    What is the stability of Proteostat aggresome detection Kit at 25°C?

    Hello,

    After using this kit, I forgot to put it back at -20°C during the weekend. Thus I was wondering if I can use it or if I have to order a new one.

    Best,

    Quentin

    Quentin Schenkelaars

    OK thank you very much for your answer. I already bought a new one. But I will test the old one at the same time before throwing it. away

    Quentin 

  • Frederick Hausheer added an answer:
    1
    Difference in stimulation index ?

    Is there a difference in stimulation index values between drug specific clones of hypersensitive patients and those drug specific clones derived from healthy naive volunteers by the technique of DCs-T-cells priming.

    I noticed (in my project) that the first group show a higher stimulation index as compared to the second group. Has anyone noticed something similar? what is the possible explanation ?

    Frederick Hausheer

    Heterogeneity of the baseline phenotypic and genomic state of patients T cells and dendritic cells is the general answer. I believe that what you're seeing is normal variance. The age of the cells (older tends to be less responsive), the immune status of the patient (how many T-cells), concentration and other unknown factors. The cells also respond differently to different enhancers such as GM-CSF, IL-15, p38, etc. and the responses are different/variable among patients. When a patient is sampled and prepared for DC-T antigen targeting, there is a range of responses in the population compared to other patients - we aim to get their counts up to ca. 10^8 for administration. 

  • Mohammad Gad added an answer:
    3
    Can I use DNA from FFPE samples for Targeted Amplicon Sequencing?

    I'm looking into using DNA from FFPE samples for targeted Amplicon sequencing to look at one gene in particular, has anyone tried this or know of something similar? I know the Illumina kits exist for this but I wanted to ask if anyone had tried this and if they ran into any difficulties in doing so?

    Mohammad Gad

    I agree with Irina. You can perform targeted sequencing using the DNA extracted from FFPE samples. There are different kits available in the market to extract DNA from FFPE. Depends on the tissue size, the DNA yield will vary. De-paraffinization is an important step as well, you can use Hemo-De instead of Zylene. Assessing your DNA conc using fluorometer instead of normal spectrophotometer will be helpful in getting the DS-DNA conc. 

  • Talaat I. El-Emary added an answer:
    7
    How many drugs are currently in market possessing the heterocyclic scaffolds?

    Heterocycles are common fragments of the vast majority of marketed drugs. This is a reflection of the central role that heterocycles play in modern drug design. They can serve as useful tools to manipulate lipophilicity, polarity, and hydrogen bonding capacity of molecules, which may lead to improved pharmacological, pharmacokinetic, toxicological, and physicochemical properties of drug candidates and ultimately drugs.

    Talaat I. El-Emary

    Dear Gaurav,

    You welcome. I wish you good luck

  • Ahmed E Abdel Moneim added an answer:
    46
    What is the possible reason for precipitation of heavy metals during LC50 measurement in aquatic animals?
    During measurement of cadmium, lead and other heavy metal toxicities, we used serial concentrations of metal salt geometrically. In the highest doses, we always observe a whitish precipitation and by continuing our experiment, we did not find any mortality after 24 hours. Water quality parameters were checked and listed as follow: pH:7.8/ EC: 0.43 ms.m-2/ DO: 5.6-6.3 ppm/ Hardness: 220 mgCaCo3 and etc.

    How could I prepare a toxicological test without facing the precipitation of metal?
    And what is the reason(s) for using geometric series in toxicity tests?
    Ahmed E Abdel Moneim

    To Sarah, You should use acidic medium to prepare lead acetate may be by adding few drops from acetic acid and prepare the mixture freshly every day.

  • Louis Macovsky added an answer:
    5
    Where can I find a source of Tribolium castaneum flightless phenotype?

    I am looking for a source of the flightless phenotype Tribolium castaneum.  I will be using a shared laboratory space for toxicological studies and want to ensure containment. Thanks, Lou

    Louis Macovsky

    No. However I have put that work on hold for now. The last time I used T. castaneum was in '96. I got my "seed" organisms from a lab. at the University of Vermont.  I don't believe they are currently working with them.  If you are doing genetics work, try the Brown Lab (Susan Brown) at Kansas State University.

  • Varshil Mehta added an answer:
    12
    Where can I publish a little review article about the clinical use of metal chelators (EDTA, DMPS and DMSA)?
    The manuscript is about 3800 words, and should be suitable for publication in a medical journal with low impact factor indexed in PubMed/Medline.
  • Kinjal Deval Shah added an answer:
    2
    I'm currently trying to make an ex-vivo skin model as a part of my project. Is it possible without using transwell culture plates?

    My project is to make 3D skin model in lab as an alternate to check skin toxicologies and various other applications related to skin biology.

    Kinjal Deval Shah

    Thank you so much Ghosh Sir.

    Yes very true Sir. After posting this question, I also went through literature and that also suggested the same.

  • Alex Thomas added an answer:
    2
    In guinea pig skin sensitization study, why acetone is insisted for challenge exposure if Test substance is water insoluble?

    where as for induction 80% ethanol is insisted.

    Pls discuss

    Ref:

    OECD 406

    Alex Thomas

    ya I feel your answer makes sense

    Thank you Dr. Macherey

  • Ahmad Ghorbani added an answer:
    3
    Does anyone have any information on assessment of heavy metals in paper based food packaging materials?

    the technique used is ICP-OES

    Ahmad Ghorbani

    hi.

    I have a packing material of lead poisoning

  • Lois A Haighton added an answer:
    3
    I wonder WHY we use the Maximum Tolerated Dose at all? Where are the original studies?

    I just read the definition shown: "About Maximum Tolerated Dose
    The highest dose of a biologically active agent given during a chronic study that will not reduce longevity from effects other than carcinogenicity. (from Lewis Dictionary of Toxicology, 1st ed)"

    And I feel it enhances my position that something is off-track about this dose concept.  After all, when administering in a clinical trial, how can the PI be at all sure that it will NOT reduce longevity?  I don't think they can.

    I feel this is an old-style way to use drugs based on less regard for Human Subjects.  We are much more aware that long-term HARMS are being done with all drugs.  We were not when this standard was adopted.

    I write as a Cancer Patient Advocate, founder of Annie Appleseed Project.

    Lois A Haighton

    Hello,

    You may find the following abstract to be of  interest.

    Chevret, S. 2008. Maximum Tolerable Dose (MTD). Wiley Encyclopedia of Clinical Trials. 1–5.  http://onlinelibrary.wiley.com/doi/10.1002/9780471462422.eoct627/abstract

    Hopefully the reference list to the full article will include some of the earlier studies you are looking for.  The abstract also refers to other methods that are alternatives to MTD, which may help support your efforts.

    See also. 

    Takimoto CH. Maximum tolerated dose: clinical endpoint for a bygone era?
    Target Oncol. 2009 Apr;4(2):143-7.  http://www.ncbi.nlm.nih.gov/pubmed/19377851

    Regards

  • Venkata Harsha Vardhan Boddeda added an answer:
    4
    How can we do toxicity study for a formulated product?

    We have a recombinant protein which we used as a carrier for drug delivery. We wanted to do toxicology studies of the protein. As it is just a carrier but not the drug, on what basis, we can set the maximum dose? 

    For example, if I have an X drug which has ED50 of 10mg/kg, then I can go upto more than 100mg/kg and look for any toxicity. But I have a protein which is a carrier but not done the ED50 of the drug which is tagged to that protein. I want to use the protein itself and assess toxicity. 

    So my doubt is. Do I need to do know the ED50 of the drug prior to toxicity study of the formulated protein? 

    Should I perform the ED50 of the drug and then should I know how much dose is required to carry that ED50 of the drug and then set the maximum dose limit of the protein? 

    I am not looking for toxicity of the drug. 

    Thank you

    Harsha

    Venkata Harsha Vardhan Boddeda

     Thank you Dr. Keizer, Dr. Zuluaga and Ilika for your valuable information. 

    Your attached files are going to help me for further planning of experiment. 

    Regards,

    Harsha

  • Alex Thomas asked a question:
    Open
    Suggest a method to obtain sample for MPCA enumeration from organ/tissue without disturbing spore?

    As per the OPPTS 885.3050 it is stated that One should perform MPCA enumeration in tissues and Organs, as homogenization of tissue/organ can disturb spores. pls suggest a better method 

  • Ali Ghazi added an answer:
    3
    What happens when a bee venom is dissolved and autoclaved

    what happens when a bee venom is dissolved and autoclaved weather it has an an activity or ot loses its biological properties 

    Ali Ghazi

    bee venom can be affected by heat or storage conditions this return to the nature of bee venom component , so it should be kept away from these conditions

  • Farkhanda Arshad added an answer:
    7
    How to check toxicity level of plant peel before administration to human obese subjects?

    I want to check toxicity of plant peel extract before administration to human subjects

    Is there any lab test available for that except administration to mice?

    Farkhanda Arshad

    ok i got the point

  • Karsten Severin added an answer:
    5
    Is anyone working on Fume-Events?

    Reports on Fume-Events in aircraft cabin are increasing. It would be interesting to know who is working where on the toxicological, medical, psychological, and technical aspects of cabin air contamination.

    Karsten Severin
    In Germany there is about one fume-/smell-event reported every day to the authorities. Most often flight attendants are affected, who more and more are showing severe symptoms, most often neurological disorders. There are supposed to be F/As flying, who do suffer symptoms but keep on flying because of what ever reason. Their colleagues, who - of course - will notice their deficiencies, call them "zombies."
  • Gopumadhavan Santhanamoorthy added an answer:
    8
    Why do we include a healthy group for invivo study (animal model)?

    I would like to know why we need to include a healthy animal group?

    For example: If I have 3 groups:

    1st group is a tumour induced mice treated with a non-targeted drug.

    2nd group is a tumour induced mice treated with a targete drug. 

    3rd group is a tumour induced mice but is non-treated. 

    Do we need to include a healthy mice group? If yes, why and how? For toxicology studies?

    Gopumadhavan Santhanamoorthy

    Normal healthy animals are used  to avoid the variations and baseline or historical data of the test facility would also help in better interpretation on the outcome of toxicity profile, if observed. 

  • Prof. Kantha Deivi Arunachalam added an answer:
    2
    Is bromine genotoxic?

    I will be very thankful if anyone provide an idea about if bromine or its anion bromide Br- have any potential for inducing any type of DNA damage. 

    I'll be pleased if a reference is provided too.

    In addition, is there anyone who has an experience in studying bromine's toxicological effects? 

    Whatever your response to this question is,  it's appreciated.  Many thanks in advance. 

    Prof. Kantha Deivi Arunachalam

     But what about that point related to the amperage? Does using 240 mA instead of 300 make a significant difference?

    Yes. It makes a lot of difference. so if you do not have 300mA powerpack get one.

    you will not get proper comet with 240mA

  • Shahram Dadgar added an answer:
    7
    Does anyone want to publish a book named aquaculture toxicology?

    I have a review paper entitled on mycotoxins in aquaculture, but lot of editor suggest to send it as part of book chapter.

    Shahram Dadgar

    There are some publishers in India which published books with low quality and suitable price.

  • Anne-Christine Macherey added an answer:
    9
    Can an oral dose of 20 ml/kg be divided into 2 or 3 doses in rats? If yes, what time difference should be kept between each of them?

    Along with the main question, is it required to keep he animals on fasting for the complete duration of dosing?

    Anne-Christine Macherey

    What I understand: if you prepare a solution with the correct concentration for administration at 1 ml / 100 g bw, then the solution is too viscous. So you want do divide the concentration by 2 and then split the administration of 2 ml / 100 g bw. Is that right ?

    Are you sure about the stress induced by a single administration of somewhat very viscous vs the stress induced by 2 administrations of somewhat less viscous ? For gavage, we used corn oil or carboxymethylcellulose (2% in my remaining) and this was sometimes really viscous. But fasting and gavage may also be stress inducing...

    (Off for Patrick: you make the toxicology matter so poetic when you find a P450 induction "very nice" :-)  )

  • Lawrence Vernetti added an answer:
    6
    Reference doses or Admittable Daily Intake for drugs for human toxicity studies?

    Dear All,

    We are looking for reference doses and/or admittable daily intake for human and veterinary drugs in order to evaluate the effects of drugs residues and metabolites found in freshwater.

    Where we can find a database/collection/source of data about these toxicological parameters for drugs?

    Thank you di advance

    Lawrence Vernetti

    Here are two references with human drug information that might be useful.  Both are free downloads.  Note that the second reference is from 2003 so won't have information on new drugs.  

    Benet, Leslie Z., Fabio Broccatelli, and Tudor I. Oprea. "BDDCS applied to over 900 drugs." The AAPS journal 13.4 (2011): 519-547.
     

    Schulz, M., and A. Schmoldt. "Therapeutic and toxic blood concentrations of more than 800 drugs and other xenobiotics." Die Pharmazie-An International Journal of Pharmaceutical Sciences 58.7 (2003): 447-474.

  • Rodolphe Hajj added an answer:
    9
    What chemicals induce neuropathy?
    What chemicals induce neuropathy?
  • Behnam Ramezani added an answer:
    3
    Is a non-eye irritant a non-skin irritant?

    Seems like an easy question in skin toxicology. However, in regulatory toxicology, I cannot find an answer to this question: you can show that a skin irritant is inevitably an eye irritant, and I can't find any counterexample of non-eye irritant which nevertheless would be skin irritant (biologicaly, it is indeed not logic!). If someone has some piece of (regulatory) information for me about it, I will be glad to read it!

    Behnam Ramezani

    Tell me about the dose and exposure scenario; I'll tell you about the consequences. 

  • Nikola M Stojanovic added an answer:
    3
    Is anyone know the difference for chose positive control about netural red and MTT in cytotoxicity test?

    As these two dye has different traget. MTT is for mitocondrial and Netural red is lysosomal. So they have different mechanism. Do anyone have analysis these two method in detail.

    Nikola M Stojanovic

    In our newest paper we discussed different activity of two compounds on cell function estimated using MTT and NR.

    • Source
      [Show abstract] [Hide abstract] ABSTRACT: Two new natural products, α-furanopinguisanol (1) and furanopinguisanone (2), were identified in the liverwort Porella cordaeana (Porellaceae). Although α-furanopinguisanol was previously reported in the literature, herein, we present arguments that its structure was actually erroneously assigned to a different, related compound. Structure elucidation was accomplished by spectral means (various 1D and 2D NMR experiments, IR, UV, MS) and the structures corroborated by chemical transformations. The relative configuration of the compounds was additionally verified by an analysis of shift changes produced by a lanthanide shift reagent. Immunomodulatory properties of these two compounds were also investigated. Their influence on rat splenocytes (SPCs) was monitored through MTT, trypan blue and neutral red assays, microscopic investigation of cells, comet assay, and protein, RNA and DNA contents. It was shown that, in higher concentration (10-4 M), compound 1 induced a blast-like transformation of SPCs, while in lower ones (10-8 – 10-6 M) it acted as a cytotoxic agent. On the other hand, compound 2 exerted prominent cytotoxicity in all concentrations. It the light of the obtained data, a possible mechanism of action of the two compounds was discussed.
      Full-text available · Article · Apr 2016 · RSC Advances
  • Abhishek Raj added an answer:
    3
    How can we distinguish of Daphnia sp ?

    Hello everyone, if we want to work on toxicity assessment using Daphnia Magna, how can we distinguish Daphnia magna from other species such as Daphnia pulex which obtained from lakes/ponds? What are the most visual differences between them? What is the most important of characteristic of D. magna?

    Abhishek Raj

    Please see links for comparative studies on different species of Daphnia for toxicity assessment.

    1. http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3792065/

    2. http://webcache.googleusercontent.com/search?q=cache:D26ZG6cwzr4J:www.reach-info.de/dokumente/sensitivity_endbericht_final.pdf+&cd=2&hl=en&ct=clnk&gl=in

    3. http://webcache.googleusercontent.com/search?q=cache:HPt-kKtqnecJ:www.scielo.br/scielo.php%3Fscript%3Dsci_arttext%26pid%3DS2179-975X2014000100002+&cd=3&hl=en&ct=clnk&gl=in

    4. http://webcache.googleusercontent.com/search?q=cache:vC4wzsPv5AEJ:etheses.bham.ac.uk/3814/1/barnett_12_MRes.pdf+&cd=9&hl=en&ct=clnk&gl=in

    Hope it help!

  • Bharathy Sukumar added an answer:
    3
    What is the Biosafety Level (I-IV) for the use of snake venom as per Indian guidlines?

    Toxicology & Pharmacology

    Bharathy Sukumar

    BSL II can be used to handle toxins. PFA related to Toxins of Biological Origin
    Safe Work Practices which is prepared by University of Washington (Environmental Health and Safety). 

  • Carlos Tagliati added an answer:
    5
    What toxicology information is important to you?

    I have taken on a Scientific Writer role at Pharmaceutical Press and it is my job to coordinate the development of Clarke's Analysis of Drugs and Poisons. To identify which direction to take the publication I would be grateful if anyone with a toxicology background, or that has an interest in toxicology would complete the linked survey.

    Everyone who enters will be entered into a prize draw and the lucky winner will receive a £50 Amazon voucher! Please share the link with toxicology-related friends and colleagues. Thank you for your time :-) 

    Carlos Tagliati

    I work on preclinical toxicity (in vitro and in vivo). For me, biomarkers are important in Toxicology.

  • yanzhu zhu asked a question:
    Open
    Will you want to submit your manuscript to the biomed research international?


    Potential topics include, but are not limited to: 
    Environmental exposures with potential risks for adverse eects in humans
    and animals
    The interrelationships between nutrition and toxicology
    New techniques for assessing potential toxicity, including molecular biology
    Mechanisms underlying toxic phenomena
    The interactions of multiple stressors and their resulting effects


    Authors can submit their manuscripts via the Manuscript Tracking System at
    http://mts.hindawi.com/submit/journals/bmri/toxicology/tex/.

  • Georgia Alexi asked a question:
    Open
    Does anybody know any Forensic Sciences Institutions in Europe that host both Toxicology AND Forensic Entomology departments in the same city ?

     We are two students graduating soon in the University of Crete (Biology Dept.) and both of us are deeply interested on Criminal Investigation through toxicology and entomology techniques. We are both planning on an Erasmus internship, starting this summer.

  • Alex Thomas asked a question:
    Open
    Do you feel Dermal irritation study is needed if test item do not cause any irritation in an eye irritation study?

    .

  • Boris Katsnelson added an answer:
    18
    Can anybody give a scientifically correct definition of what is 'toxicity' or 'toxic effect'?

    This question is not as simple as it may look.

    Boris Katsnelson

    thanks!

  • Jai Ghosh added an answer:
    5
    How can I detect < 5 (nanograms / liter) N-Nitrosodimethylamine in blood plasma [I need advice with my idea!] ?

    Is there an easier method? 

    Some preliminary information

    Okay, so I was asked to develop a method to detect, not purify, just quantify the concentration of N-Nitrosodimethylamine (NDMA) in blood plasma collected from whole blood of patients eating a nitrate rich diet ...

    which should lead to the production of NDMA by N2O3 formation in vivo releasing NO[+] nitrosonium ion which reacts with amines in a not surprisingly nitrosation process. This produces nitrosamines of to my knowledge an unknown concentration. So I would like to be able to detect NDMA in plasma at low concentrations, even if there is no more than 5 nanograms / L present.

    This is a pretty difficult task given that it's more easy to detect micrograms / liter concentration than nanograms / liter concentration, even with MS-MS methods in the literature it seems like the lower limit of quantification is too high about 10 times to 1000 times too high which is not acceptable. Most of the research papers out there analyze techniques to detect NDMA in water samples because NDMA is suggested to have carcinogenic behavior, so it would be a good idea to reduce public exposure to this chemical. (There are some studies of NDMA in blood already out there, but for some reason the researchers have closed off scientific access to their papers if you don't have an expensive subscription, so I can't depend on that.)   

    However, I would like to detect it in blood plasma which is a more complicated matrix than the water sources studied in the literature, though plasma is largely constituted in water. Furthermore, I was able to find a scientific paper that was able to quantify 500 femtomolar concentrations of some aromatic compounds (Yuye Shi, Wenfang Liu, and Chuanpin Chen). This blew my mind because the limit of detection for this technique is more than 1,000 times lower than my goal! It essentially involves centrifuging a mixture of colloidal silver particles to get the particles with a larger surface area. This process is beneficial because it increases the concentration of the nanoparticles which correlates with an increased chance in analyte absorption. Then the analyte is mixed in with the particles and centrifuged to bind with the aggregated particles increasing the surface area. Then the concentration of the analyte is determined with surface enhanced Raman Spectroscopy. 

    This is all good. But the two chemicals (phenformin hydrochloride and risperidone) they detected were highly aromatic nitrogenous ring structures of higher molecular weight than NDMA (74.08 daltons). So I don't if it would work with NDMA since its not that big or aromatic ... perhaps! I think that maybe if I bound NDMA to a phenformin and used phenformin as an internal standard then I might be able to quantify NDMA by subtracting the areas under the corresponding curves to determine the concentration of NDMA so that I know that I'm not mistakenly quantifying phenformin as NDMA supposing the binding is unsuccessful.

    What I like about their detection technique is that it is a Raman spectroscopy technique which suggests that it is rather desensitized to detecting the water which makes up a great deal of the plasma matrix that I intend to purify. 

    But the problems that I expect to face is that I only want to bind my analyte to the colloidal silver beads and not anything else in the plasma matrix which might crowd out the space for my analyte (NDMA) to bind. So I would like to get most of the interferents out of solution, though maybe if there is nothing else like my NDMA tagged phenoform-like molecule, then hopefully the interference at the ~ 1000 wavenumber Raman shift shouldn't be too overwhelming. (How could I actually give NDMA a tag like that?

    -----------------------------

    So here is my method: 

    1) Collect the whole blood in heparin tubes to prevent coagulation.

    2) Centrifuge at 5,000 g for a couple minutes to separate Red Blood Cells from Plasma.

    3) Collect the plasma in the supernatant.

    4) Pass the plasma through chitosan - PEO20k membrane by dialysis to remove most proteins and separate the small molecules like NDMA though the pores. (Note: the pores of this membrane are about 50 - 80 nm in size.) 

    5)  By a liquid extraction, transfer the solution that passed the membrane into a solution of dicholomethane (or some similar solvent) to allow NDMA to pass into the aqueous phase since it is a very water soluble molecule.

    6) Extract the aqueous phase

    7) Prepare with centrifugation the concentrated colloidal silver particles separately. 

    8?) Affinity chromatography? The receptors that bind NDMA appear to be pretty expensive. So if it didn't work or if the elution process (involving urea?) is ineffective, then I would be a couple hundred dollars wrong. Yeah, I don't know.

    9) Combine the concentrated colloidal silver particles with the solution containing NDMA (NDMA with an aromatic tag?) and centrifuge to form the aggregated analyte complexes.

    10) Extract the precipitate, redissolve the precipitate in supernatant.

    11) Detect NDMA with Raman spectroscopy.

    Note: Because of all the prep work I don't expect to get the femtomolar concentrations they reported, but if I could detect NDMA to the picomolar range, then that would undoubtedly be wonderful!   

    ------------------------

    That's it! That's my method! Is there anything wrong with it? Are there any ways in which I could make it better?  

    Is there an easier way!? 

    It's no easy task detecting such trace quantities of NDMA from blood samples! 

    Here is that research paper that I was so excited about: http://pubs.acs.org/doi/abs/10.1021/acs.analchem.6b01194

    Jai Ghosh

    After extraction in aq. phase, you should have just used the HPLC with C18 column to detect NMDA using a suitable primary standard.

  • Susan Verghese added an answer:
    9
    How to study toxcicology impact of copper on human?

    How to study toxicological impact of copper on human?

    Susan Verghese

    Hi everyone,Thank you very much for support anf informations

    regards susan verghese P

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