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Seroepidemiologic Studies - Science topic

EPIDEMIOLOGIC STUDIES based on the detection through serological testing of characteristic change in the serum level of specific ANTIBODIES. Latent subclinical infections and carrier states can thus be detected in addition to clinically overt cases.
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Transfusion-transmitted infections are a threat to people's lives, and this is due to unsafe blood donation and improper pre-transfusion testing procedures. In line with this, what are some of the protocols in place to prevent these infections? What are some of the diseases prevented by these protocols?
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The criteria of the blood donor selection should be based on the prevalence , incidence and epidemiology of TTI, and recent information on other emerging infections. It is important that criteria ensures that the blood is safe and helps in identifying blood that contains high risk diseases that needs to be deferred. the protocols screens all blood donors for the following infections which are: (1) HIV-1 and HIV-2 , Hepatitis B , Hepatitis C and Syphilis.
Reference: Blood Donor Selection: Guidelines on Assessing Donor Suitability for Blood Donation. Geneva: World Health Organization; 2012. 7, TTI and donor risk assessment. Available from: https://www.ncbi.nlm.nih.gov/books/NBK138223/
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My study is focused on estimating the seroprevalence of certain bacteria using ELISA. The seropositivity varies with age with high prevalence among 10-15 yrs and low for <5 yrs. I do have five bands of age strata and the survey is a population-based survey. My sample size is about 1000. My question is how can I distribute the sample size among 5 bands of age based on their prevalence (already reported in another research report) using the RULE of THUMB?
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Is necessary consider the sample stratification before the calculus if the expected prevalences between age ranges are different and if you want to report the prevalence for each.
The sample size must be calculated for each age range according with the their expected prevalence.
Best regards.
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Hello,
I need your help. I am working on a SARS-Cov2 seroprevalence study. I will isolate the plasmas using a ficoll gradient; I would also like to keep the PBMCs for future studies. I want to store them at -80°C as I do not have a liquid nitrogen tank. According to your experiments, how long could I keep the cells at -80°C and especially what medium should I use for freezing.
Thank you.
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Look up pentastarch freezing medium - Pat Stiff was the first author and it was published in Experimental Hematology back in the late 80s/early 90s. I am no longer in the lab, but my memory is that it is 5% pentastarch, 5% HSA and 10% DMSO, add equal volume to your PBMC suspension; do not exceed 10^8 PB-MNC per ml final concentration. Freeze at -80oC. We did this with PB-MNC collected from cancer patients mobilized with G-CSF. I was able to recover 92% of CFU-GM frozen 14-25 years post-freeze. Viability of non-HSC [by 7-AAD exclusion] was lower and more variable, but ran 40-63%.
I've routinely used the FBS/DMSO medium described by Malcolm Nobre for freezing cell lines. Typically, they are good for 3 years at -80oC, then the viability drops.
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Dear Researchers,
In this corona pandemic, we are looking into mainly three possible options of combat i) drugs to treat after infection, ii) vaccine and iii) herd immunity. No the first two options seems to be just a inch of distance as some labs, groups of researchers demands its success and availability in near future and simultaneously some groups raises questions about these like success rate and side effects. Finally the third option comes in front and shows some hope in near future as it was early estimated that about 60% of a community needs to get infected but the recent calculations by the mathematicians from the University of Nottingham and University of Stockholm pointed out that it is enough if 43% of a community gets infected1. Again a seroprevalence survey by Indian Council of Medical Research showed that in Kolkata and surrounding area of West Bengal, India showed that over 14% people have developed COVID-19 antibodies2. So are we approaching towards herd immunity?
Hope you will input you view regarding herd immunity.
Thank you.
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Let us hope that once the COVID-19 vaccination coverage reaches 70% of the susceptible population, the resulting herd immunity would help to mitigate the spread and the lethality of the SARS-CoV-2. However, it may take years before this becomes a reality in poor countries of the world.
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In Spain, the Goverment give public preeliminary results about the seroprevalence study of Covid-19:
5% of seropravelence in Spain... this is aproxm. five more times that you can modeled with Corean and German information about Covid, and about the double that another study of seroprevalence with a major "n" in Galicia (Spain) using the same IC (inmunocromatography).
Do you see any wrong in the experiment desing??
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There are many studies with different results.
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Dear researchers,
I come across some papers in Epidemiology field where they use geometric mean concentration for antibody titer. I wonder why do we want to use geometric mean concentration, what is the advantage(s) and disadvantage(s) of using this calculation for antibody titer.
Also if any one can suggest a good reference to read about it, I would really appreciate.
Thank you.
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Antibody effects are often tested by observing reactions at concentrations which are multiples of each other  eg 2x, 4x,8x, 16x  or 10x, 100x,1000x. This imples the logarithms of the concentrations increase arithmetically.In a series of observations the logarithms give a more symmetical distribution for whicn an arithmetic mean is appropriate. The arithmetic mean of the logs is the log geometric mean(GM)
log GM = 1/n { logx1 + logx2 + logx3.....logx}
            = log[{x1x2x3   xn} 1/n.]
so GM ={x1 x2 x3 ....xn} 1/n
The technique can be used for other observations following a log normal type of distribution, eg occupational and environmental dust  exposures
See eg Armitage and Berry Statistical Methods in Medical Research 2nd ed 1987 p 31-33.
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I've been running indirect ELISAs using Apical Membrane Antigen-1 and Merozoite Surface Protein-1 to test serum samples from a low transmission region for previous exposure to malaria. A majority of our sample are under the age of 18, however the literature is unclear as to what the window for detecting malaria antibodies are using these antigens. Does concordance between antigens suggest a more recent exposure? If someone could elaborate or recommend literature explaining detection thresholds and windows for these two antigens I would greatly appreciate it.
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In 18 year olds even in low transmission regions I would expect antibody to at least one of the antigens, though which one comes up more prominantly is hotly debated and possibly region dependent. The below literature should help. I have looked at both of these antigens following controlled human malaria infection (equivalent to a low dose, single exposure) and I see antibodies only to MSP1 not AMA1. You can find out more from my most recent paper, though I focus more on b cells that antibody.
Wipasa J, Suphavilai C, Okell LC, et al. Long-lived antibody and B Cell memory responses to the human malaria parasites, Plasmodium falciparum and Plasmodium vivax. PLoS Pathog 2010;6(2):e1000770.
Clark EH, Silva CJ, Weiss GE, Li S, Padilla C, Crompton PD, Hernandez JN, Branch OH. Plasmodium falciparum malaria in the Peruvian Amazon, a region of low transmission, is associated with immunologic memory. Infect Immun 2012;80(4):1583-92.
Nogaro SI, Hafalla JC, Walther B, Remarque EJ, Tetteh KK, Conway DJ, Riley EM, Walther M. The breadth, but not the magnitude, of circulating memory B cell responses to P. falciparum increases with age/exposure in an area of low transmission. PLoS One 2011;6(10):e25582.
Dorfman JR, Bejon P, Ndungu FM, et al. B cell memory to 3 Plasmodium falciparum blood-stage antigens in a malaria-endemic area. J Infect Dis 2005;191(10):1623-30.
Kinyanjui SM, Conway DJ, Lanar DE, Marsh K. IgG antibody responses to Plasmodium falciparum merozoite antigens in Kenyan children have a short half-life. Malar J 2007;6:82.