Science topic

Photosynthesis - Science topic

The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide using energy obtained from light rather than from the oxidation of chemical compounds. Photosynthesis comprises two separate processes: the light reactions and the dark reactions. In higher plants; GREEN ALGAE; and CYANOBACTERIA; NADPH and ATP formed by the light reactions drive the dark reactions which result in the fixation of carbon dioxide. (from Oxford Dictionary of Biochemistry and Molecular Biology, 2001)
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Photosynthesis is the key factor to remove CO2 from the atmosphere
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I appreciate that producer communities can significantly contribute to reducing CO2 levels. Some of the strategies they can employ include: Sustainable agriculture: By applying techniques such as crop rotation, organic production and agroecology, producers can reduce the use of chemical fertilizers and pesticides, which helps reduce CO2 emissions.
Increasing reliability and efficiency: The introduction of environmental technologies and more efficient processing methods can reduce energy consumption and, therefore, CO2 emissions. Waste reduction: Manufacturers can work to minimize waste through recycling and reuse, thereby reducing the need for new resources and energy.
Plant trees and green spaces: Investing in afforestation projects and maintaining green spaces can help absorb CO2 from the atmosphere. Localization of production: Supporting local markets and short supply chains reduces the need for transport, which is a large source of CO2.
Promoting awareness of climate change and sustainable practices among producers can lead to wider adoption of environmentally friendly methods.
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كيف يساهم انزيم الكاتلاز في عملية التمثيل الضوئي في النباتات؟
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While catalase is not directly part of the photosynthetic pathway, it plays a crucial supportive role by protecting the photosynthetic machinery from oxidative damage, thus ensuring that photosynthesis can proceed efficiently. Its function in breaking down hydrogen peroxide is essential for maintaining the health and efficiency of the cells where photosynthesis takes place.
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I utilize a photosynthesis reactor for wastewater treatment. Within the reactor, I collect biomass and aim to establish its molecular equation of biomass, such as CxHyNzPtKi.... I would greatly appreciate any advice, techniques, or relevant papers you could provide on this matter.
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Hey there Que Ho! I'm glad you're interested in optimizing your wastewater treatment process. Establishing the molecular equation of biomass can be quite beneficial for understanding its composition and potential applications.
One common technique for determining the molecular formula of biomass is elemental analysis. This involves measuring the percentages of carbon, hydrogen, nitrogen, sulfur, and oxygen (CHNSO) present in the biomass sample. From these percentages, you Que Ho can calculate the empirical formula of the biomass.
To get started, you'll Que Ho need access to an elemental analyzer, which can accurately measure the elemental composition of the biomass. Once you have the percentages of each element, you Que Ho can use them to calculate the empirical formula.
Here's a basic outline of the process:
1. Collect a representative sample of your biomass.
2. Prepare the sample for elemental analysis according to the analyzer's specifications.
3. Analyze the sample using the elemental analyzer to determine the percentages of carbon, hydrogen, nitrogen, sulfur, and oxygen.
4. Calculate the empirical formula based on the elemental percentages obtained.
Keep in mind that elemental analysis provides the empirical formula, which gives you Que Ho the simplest whole-number ratio of atoms in the molecule. For a more precise molecular formula, additional techniques such as mass spectrometry or nuclear magnetic resonance (NMR) spectroscopy may be required.
Interesting articles to read:
As for relevant papers, I recommend looking into research articles on biomass characterization and elemental analysis techniques. You Que Ho might find papers discussing specific methodologies or case studies related to biomass composition analysis.
Feel free to reach out if you Que Ho need more detailed guidance or have any other questions. Happy experimenting!
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I want to study the impact of indoor plants on the indoor thermal environment. Is there any suitable simulation software that can reflect the effects of plant transpiration, respiration and photosynthesis?
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To simulate the effects of plant photosynthesis, respiration, and transpiration on indoor temperature and humidity using numerical simulation, you would typically follow these steps:
1. **Model Development**: Develop a numerical model that represents the indoor environment, including temperature and humidity dynamics. This model should also incorporate equations describing plant photosynthesis, respiration, and transpiration processes.
2. **Parameterization**: Define parameters for the plant physiology, such as photosynthetic rates, respiration rates, and transpiration rates, based on experimental data or literature values.
3. **Integration**: Integrate the equations representing plant physiology into the indoor environment model. This could involve coupling the equations governing plant processes with those describing indoor temperature and humidity dynamics.
4. **Validation**: Validate the model by comparing simulation results with experimental data or observations from indoor environments where plants are present. This ensures that the model accurately captures the interactions between plant physiology and indoor environmental conditions.
5. **Scenario Analysis**: Use the validated model to conduct scenario analyses, such as varying plant densities, species compositions, environmental conditions, or management practices, to assess their impacts on indoor temperature and humidity.
6. **Sensitivity Analysis**: Perform sensitivity analyses to identify key parameters or processes that significantly influence indoor temperature and humidity dynamics in the presence of plants.
7. **Optimization**: Explore optimization techniques to identify optimal conditions for indoor environments with regard to temperature, humidity, and plant growth, considering constraints such as space limitations or resource availability.
By following these steps, you can use numerical simulation to study the effects of plant physiology on indoor temperature and humidity, allowing for better understanding and management of indoor environments with vegetation.
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I read that in order to facilitate the production of huge amounts of membrane for oxygenic photosynthesis, that is, taking place with the release of oxygen (as opposed to anoxygenic photosynthesis) and the change taking place in plants and cyanobacteria from phospholipids to glyceroglycolipids as the main component of membranes, may have given cyanobacteria an evolutionary advantage, because the availability of phosphate, which is used in the synthesis of phospholipids, it is limited.
I found that information, but I am not sure where and do you have maybe more information about that in articles etc.
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Dear Jakub Hryc In the similar question asked here https://www.reddit.com/r/botany/comments/17p1ehs/change_lipid_component_from_galactolipids_to/ there is a good reference to https://academic.oup.com/pcp/article/59/6/1128/4990989?login=false where the message is not so much that phosphate is limited (which is sheer nonsense because all (cell)membranes of animals, included us humans, and most of the bacteria are constituted of phospholipids) but “these two lipids [the galactolipids MGDG and DGDG] are important for maintaining chloroplast morphology and for plant survival under abiotic stresses such as phosphate starvation and freezing”
Best regards.
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I am wondering if photosynthesis is an exothermic or endothermic process. What I knew that it is an endothermic process because photosynthesis needs energy in the form of radiation to prepare sugar but I have read a few papers where the authors mentioned that photosynthesis adds energy to the surrounding system means an exothermic process.
Please share your knowledge related to photosynthesis with evidence if possible. I am trying to account for the energy involved in the process of photosynthesis. Can anyone tell me the best method to calculate this energy for the agricultural system?
Your response will be highly appreciated.
Thanks
Taqi Raza
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According to jacksofscience.com and chem.libretexts.org, photosynthesis is an endothermic process. This means it requires an input of energy to occur. In photosynthesis, plants use sunlight energy to synthesize glucose and oxygen from carbon dioxide and water. Absorbing sunlight energy and converting it into chemical energy requires an input of energy. This makes photosynthesis an endothermic process. The specific light-dependent reactions where water is split to release oxygen require photon energy from sunlight to proceed. This absorbs energy. The Calvin cycle reactions where CO2 is converted to sugar also require energy in the form of ATP and NADPH, which are generated during the light reactions. The total of all the chemical reactions in photosynthesis stores more energy in molecules like glucose than what you start with in CO2 and H2O. This net storage requires energy input. So, in summary, photosynthesis requires sunlight energy absorption and transformation to occur, making it an endothermic, energy-consuming process.
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This is for my Extended Essay, which is an academic requirement of the IB Program. Any help would be greatly appreciated!
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Javad Fardaei: Hi Mr. Fardaei, thank you very much for your insight. However, I think quantum mechanics doesn't necessarily refer to the "mechanical" behaviour of atoms. I believe it refers to the various branches of physics and how they apply to subatomic occurrences. But I do understand where you are coming from and will take your advice into consideration.
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Could you provide any scientific data on the type of photosynthesis the Moringa species perform?
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Taichi Sugiyama , thank you for the link.
Yes, so-called "C2 photosynthesis" it is a new approach related to the fact, that through photorespiration a part of the captured carbon dioxide pool is incorporated into plant photosynthetic metabolism. See e.g.
The name is a little bit confusing, however... In biological sciences, we have lots of abbreviations, acronyms etc. They overlap sometimes, which brings a little mess.
Best regards,
Renata
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I am interested in the growth characteristics of Synechocystis sp. PCC 6803 and its response to high light intensities. Specifically, I am interested in whether the growth of Synechocystis sp. PCC 6803 can be completely halted at very high light intensities, such as those exceeding 1000 μmol(photons) m-2s-1. While previous studies have documented a decline in growth rate attributed to photoinhibition, I am curious to know if this phenomenon has the potential to entirely arrest the growth of these cyanobacteria.
I would greatly appreciate any insights, hypotheses, or experimental findings related to this topic. Additionally, if you have any relevant references or suggestions for further research, please feel free to share them.
Thank you in advance for your contributions.
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There is some evidence to suggest that the growth of cyanobacteria undergoes complete cessation under conditions of extremely high light intensity, depending on the species and strain of cyanobacteria, the duration and frequency of exposure, and the availability of nutrients.
Cyanobacteria are photosynthetic microorganisms that can adapt to various light conditions by adjusting their photosynthetic apparatus and metabolism. However, when the light intensity exceeds their capacity for light harvesting and utilization, they can experience photoinhibition, oxidative stress, and damage to their photosystems and other cellular components (1),(2).
Some studies have reported that cyanobacterial growth can be completely halted at very high light intensities, such as those exceeding 1000 μmol(photons) m-2s-1. For example, a study by Muhetaer et al. (2020) found that two cyanobacteria species, Pseudanabaena galeata and Microcystis aeruginosa, showed a significant decline in growth rate and biomass production when exposed to 600 μmol(photons) m-2s-1 for two or eight days (3). Another study by Yoshikawa et al. (2021) found that the cyanobacterium Synechocystis sp. PCC 6803 showed a complete cessation of growth when exposed to 2000 μmol(photons) m-2s-1 for 24 hours (4).
However, other studies have shown that cyanobacterial growth can be maintained or even enhanced at high light intensities, depending on the acclimation and adaptation mechanisms of the cyanobacteria. For instance, a study by Silveira et al. (2019) found that the cyanobacterium Microcystis wesenbergii showed an increased growth rate and toxin production when exposed to 1000 μmol(photons) m-2s-1 for 12 days (5).
The response of cyanobacterial growth to high light intensity may also depend on the availability of nutrients, such as nitrogen and phosphorus, which are essential for photosynthesis and cellular metabolism. Some studies have suggested that nutrient limitation can exacerbate the negative effects of high light intensity on cyanobacterial growth, while nutrient enrichment can mitigate or reverse them (5).
Therefore, the answer to your question may vary depending on the specific conditions and parameters of your experiment. However, based on the available literature, it seems possible that the growth of Synechocystis sp. PCC 6803 can be completely halted at very high light intensities, such as those exceeding 1000 μmol(photons) m-2s-1, especially if the exposure period is long or repeated, and if the nutrient supply is low or limiting.
(2) Enhancing photosynthesis at high light levels by adaptive ... - Nature. https://www.nature.com/articles/s41477-021-00904-2.
(3) Effects of Light Intensity and Exposure Period on the Growth and Stress .... https://www.mdpi.com/2073-4441/12/2/407.
(4) Mutations in hik26 and slr1916 lead to high-light stress tolerance in .... https://www.nature.com/articles/s42003-021-01875-y.
(5) Effects of light intensity and nutrients (N and P) on growth, toxin .... https://link.springer.com/article/10.1007/s10750-021-04649-z.
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In the high N the photosynthesis is also high. if photosynthesis is high then carbohydrate content of the leaf must be increased. But the different research done I found high N dose decrease the carbohydrate content of the leaf. What might be the reason for that?
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Decreased concentrations of total non-structural carbohydrates (TNC) are observed with an increasing nitrogen supply. Your research is correct :)
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PhiF and PhiP are two key parameters of plant leaf fluorescence and photosynthesis. The relationship between them can provide information on photosynthetic efficiency and plant status. However, the relationship between PhiF and PhiP is complex, especially in different vegetation ecosystems under different environmental conditions.
I would like to ask, in crops under drought conditions, what is the relationship between PhiF and PhiP? What are their diurnal changes?
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Linsheng Wu It is a really important and interesting question. From my opinion, it depends on the drought condition. The results may be different for mild and servere droughts. You mentioned crops, but there are many cultivars. Some of them are susceptible, and some are resistant to water shortage. And the duration, the time of the drought may also alter the result. So I think it is hard to draw a general conclusion. I have a similar question, but I would state it like this: how does the relationship between phiF and phiP (and their diurnal patterns) change as the environment gets dryer? I think the work of Prof. van der Tol (2014) gives us a nice answer. But there are still problems remained, because the droughts involve mutiple factors and changes in both environment and plant.
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We have read that in photosynthesis plants absorb water and carbon dioxide in presence of sunlight releasing glucose and oxygen. This is the chemical formula. What is the physics behind this process? Can we think of a mathematical model for this process? A generic model or the math of this process. Math is a repetitive behaviour exhibited by any natural entity.
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Extensive work has been done and published in this field. That is not to say it's unchallengeable!
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1. How does organism move carbon through the carbon cycle?
A. Nitrogen fixation, decomposition, sedimentation, and photosynthesis
B. Respiration, decomposition, sedimentation, and photosynthesis
C. Respiration, decomposition, precipitation, and photosynthesis
D. Respiration, burning fossil fuel, sedimentation, and photosynthesis
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So, I see you have posted a number of questions recently to ResearchGate, a professional website for research scientists. The wording of your questions appears to be copied from exams. If so, stop this right now. It an inappropriate use of this webpage and counts as plagiarism/academic misconduct.
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I cannot find any references in the scientific literature that report what the most common plant is. Does anyone have any sources? Does anyone know which plant is responsible for the most photosynthesis overall?
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In my opinion Cynodon dectylin is the most common plant.
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What are the direct and immediate effects of climate change on plants photosynthesis and growth?
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The following link is also very useful RG link:
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Light (PAR) is necessary for photosynthesis. But how to calculate the minimum amount of sunlight necessary for the expected growth of a crop( no crop loss ) and beyond this PAR the plant is considered to be subjected to low light stress?
Is there any paper of systematic protocol?
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To optimise most plant growth it is recommended that they receive 500–1000 µmols of PAR light for every m² (PPFD). Less than this and growth rates will be low :)
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I have plenty of data from leaves, but is there a way to calculate their photosynthesis rate?
I count with:
  • Leaf temperature
  • Leaf VPD
  • Stomatal conductance and density (stomata/cm2) and their % aperture
  • RH & Temperature from the environment
  • Irradiation from the sun (W/m2)
  • PAR Light
I know that the best way to obtain photosynthesis rate is with a enclosed chamber and measure the decrease of CO2, but is there a way to calculate it with some of the data that I already have?
I have been searching for a mathematical model or any kind of coupled equations, but I haven't found any info.
Thanks in advance.
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photosynthesis depends on the light energy captured by the chlorophyll pigments, this green light is made up of three Green-Red and Blue bands.can infiltration of light energy damage cells to cause leaf senescence?
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Senescence is the final stage of plant development and is characterized by a series of programmed disassembly and degenerative events. As leaves age, chloroplast degeneration is initiated, paralleled by catabolism of macromolecules, including nucleic acids, proteins and lipids. The released nutrients are exported to other developing organs, such as new buds, young leaves, flowers or seeds, which leads to increased reproductive success.
However, during photosynthesis, excess natural or artificial light can cause photo-oxidative damage to chloroplasts. It has been shown that chlorophagy, the intracellular destruction of chloroplasts, is induced by exposure to UV-B irradiation (280–315 nm) and high light. Researchers have also demonstrated that entire photo-damaged chloroplasts are transported to the plant cell vacuole for destruction.
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I'm trying to figure out how to measure chlorophyll/unit leaf area and photosynthesis/unit chlorophyll, and I have DMSO and SPAD chlorophyll data. If you have any suggestions, please let me know.
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i sorry i am not measure chlorophyll in the leaf but i measured
chlorophyll/unit photosynthesis/unit chlorophyll, in coral reef only
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Hi everyone
I need some good papers which can explain the above-asked question. I need to know what exactly LRCs tell about the photosynthesis in plants which is not covered by chlorophyll fluorescence alone. If anyone can explain in simple words (with some references), it would be highly appreciable.
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Hello Nisma,
Put very simply, “photosynthesis” consists of two, linked groups of processes – the “photo” part and “synthesis” part. Photo reactions go from the absorption of light and the mechanisms for converting the energy into `high-energy’ compounds such as ATP and NADPH which are used in the assimilation of CO2 and NO3 and “synthesis” of carbohydrates and amino acids.
Analyzing the responses of these two processes in relation to the available light energy (light response curves) is required in order to understand the mechanisms of the whole, combined process. The two are not in any way the same, and they respond differently to conditions inside and outside the plant. How they are linked is also complex quantitatively. An example is the effects of leaf and cell water deficit on the two. Water deficit in the chloroplast does not much affect light energy capture and electron transport continues as the cell loses water, but because the stomata tend to close CO2 supply is restricted. So the electrons and NADPH (called reductant) are not used in CO2 assimilation. Energy builds up and highly energetic oxygen radicals are formed, damaging the photosynthetic apparatus. Extremely important damage is done to the mechanism for synthesis of ATP. ATP synthesis slows, inhibiting CO2 assimilation yet further. These processes are the `stomatal’ and `metabolic’ limitations discussed in my papers several years ago. Decreased ATP affects all cell processes either directly or indirectly and this has provided the key to understanding why water deficit (drought) has such profound effects on plants.
Analyzing both the response, to light intensity, of energy use by fluorescence and CO2 assimilation by gas exchange methods enabled the processes to be related and understood. This had not been possible earlier and depended on the technology to combine the two types of light response curves. Hope this helps.
Some references, available on ResearchGate, are:
Lawlor DW. 2001. Photosynthesis. 3rd edn . 386 pp. Oxford: Bios.
Tezara, W., Mitchell, V. J., Driscoll, S. P. and Lawlor, D. W. 1999. Water stress inhibits plant photosynthesis by decreasing coupling factor and ATP. Nature. 401 (6756), pp. 914-917. https://doi.org/10.1038/44842
,
David W Lawlor, ( 2002) Limitation to Photosynthesis in Water‐stressed Leaves: Stomata vs. Metabolism and the Role of ATP Annals of Botany, Volume 89, Issue 7, , Pages 871–885,
David W Lawlor , Wilmer Tezara (2009)
Causes of decreased photosynthetic rate and metabolic capacity in water-deficient leaf cells: a critical evaluation of mechanisms and integration of processes. Ann Bot 103(4):561-79.
doi: 10.1093/aob/mcn244. Epub 2009 Jan 19.
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I am not ruling out that answers are already in some published papers.
Could you please give more references?
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With the data of each variables, PCA can give good results
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The percentage of light used by plants durning photosynthesis.
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when I was a student, we were taught that it was about 1%
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Hello,
In addition to transpiration and assimilation, which physiological, anatomical or morphological traits you think could have significant impact on water use efficiency in plants?
Moreover which WUE assessment technique you find to be the most robust and representative?
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Stomata are pore spaces that allow for the exchange of gases and water. Is it possible to increase stomatal density to help in photosynthesis?
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Stomatal parts are the ones through where the photosynthesis gas for exchange passes, and defintely if the density of the stomata bodies/pores increase per given area of leaf, then there will be an increase on photosynthesis.
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Does quantum coherence relate to one particle?
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Despite having the same roots of origin, namely quantum superposition, coherence and entanglement are conceptually different.
For example, coherence can be present in single quantum systems, where entanglement is not well-defined. Entanglement shows a correlation between the pais of photons where changing the spin of one of them will affect their pair photon in a predictible way no matter the how far apart they are, Einsten call this: "spooky action at the distance"
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Hello. I've been working on photosynthesis pigment content in in vitro grown trees and was examining the formulas for determining the concentration of chlorophyll a and b and carotenoids based on absorbance, i.e. using a spectrophotometer. I've found various formulas, and even though they all share the same general design: concentration=coefficient1*adsorbance1-coeficeint2*adsorbance2, the coefficients differ among sources. I was curious as to the reason behind this. Is it due to the use of different equipment, i.e. every spectrophotometer is different, or something else? I'm new to this field, thus any help, directions to relevant introductory literature, articles, would be great.
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Philipp Girr Thanks, you made my day.
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If anyone have a link for a reliable tools to measure the photosynthesis parameters in bug trees
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Also, kindly check:
Emerging approaches to measure photosynthesis from the leaf to the ecosystem:
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Trees have different effects on the climate directly or indirectly. These effects emanate from trees’ reactions to varying climate-related factors. Factors such as greenhouse gases emission, production and emission of aerosols, albedo (whiteness), carbon and nitrogen deposition, transpiration and photosynthesis can affect the speed of climate change.
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Pollution (addition of gases into the air from human activities, such as carbon dioxide) is the main cause of climate change today.
Trees absorb some of the CO2 from the air, but people have been cutting down trees for all kinds of reasons, such as building roads, houses, etc. Therefore, unless you plant more trees and some are doing that, the CO2 builds up in the atmosphere and has the tendency to absorb heat that is being sent back into space. Instead of going to space this (outgoing) heat stays in the air and warms up the air (global warming).
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I am working on photosynthesis mechanisms on a new alga strain that has no previous studies and want to separate a special LHC under a specific light enviornment. At first, I want to compare the protein on the thylakoid membrane of this strain with Chlamydomonas reinhardtii by SDS-PAGE, therefore to determine the specific protein of each band. However, I found this is not accurate unless I undertake immunoblotting steps further. If I use BN-PAGE to separate complex first and to compare the result with C. reinhardtii, is it possible for me to determine these complexes on the thylakoid membrane and find the special LHC by following 2D-PAGE electrophoresis?
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Electrophoresis results are at best semi-quantitative. Starting with loading errors and gel-to-gel variability, there are many things that can go wrong. As with all dye-binding assays, colour yield depends on protein. If you have standards (in the same gel!), you'd at least get an idea what the error margins are.
If the staining is not too strong (in the linear range of the densitometer), you could scan the gels and integrate the peaks. Laser-based densitometers are better at this than simple scanners, because of a larger linear range (up to 4 AU). Even better results may come from fluorescent dyes like RuBPS and fluorescent scanners, simply because fluorescence starts from zero, whilst in absorbance you measure the small difference of two large numbers.
You could also cut out the bands, elute the bound dye and determine that photometrically.
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I am working on a synthetic biology project in which I am redesigning the pathways in photosynthesis of Synechococcus elongatus to become more efficient, evaluated by increase in biomass. We want to computationally model this in R but we are struggling to find packages that can help us with this. I've looked at deSolve::aquaphy which models C and N assimilation but photosynthesis rate is an input and we want to model this also.
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Hello,
I am looking for a model that corresponds to the photosynthesis of a plant (with the physiological signal). Please, does anyone have a clue ?
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I recommend a paper "Photosynthesis research a model of bridge fundamental sciences , translational products and socio-economic considerations in agriculture". Journal Experimental Botany, 2020
Successes....
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micro plastic contamination will reduce sunlight penetration and affect the photosynthesis activities and other impact. do have any report or case studies in this regard
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Hello all,
I am trying to do photosynthetic response curves at different leaf temperatures in Montreal trees. The goal is to measure from 25 to 40˚C using a Licor 6400XT. When I increase the temperature, the block can achieve until 38˚C, but the leaf temperature never exceeds ~31-32˚C. In many articles I see curves until 40˚C, can someone recommend me a technic to increase the leaf temperature or how to exceed 31˚C in the leaf temperature.
Thanks so much!
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Hi Johanna
Leaf temperature usually depends on both air temperature and vapor pressure deficit (VPD). Increasing air VPD with a good watering will lead to lower leaf temperature compared to air. It also depends on the boundary layer, but as Licor leaf chamber has a mixing fan it will blow away the boundary layer which leads to decrease in leaf temperature. If the mixing fan can be turned off, then do it first.
Then try to decrease VPD by increasing humidity of the chamber by controlling air flow rate, or of it has a humidity control, then use it.
These two methods can increase leaf temperature to a higher level. Increasing light intensity also can lead to temperature increase, but use sunlight if you can, as its wavelength temperature is significantly higher than Licor's light.
If you couldn't reach higher levels you have to give a water stress to the plant so that it decrease the transpiration rate.
All of these will finally lead to significant damage to the photosynthetic apparatus (when temperature increases above ~37 (depending on the species), so you can't hold it for long. Attached photo shows what happens to the leaf when it is kept in high temperature for too long (thermal degradation of chlorophyll), which I experienced in a branch enclosure system.
Hope it helps
Ehsan
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Light is inevitable for the process of photosynthesis reaction. Naturally sunlight plays the vital role for this process. Light may be of different colours like white, red, yellow, blue etc. However, is the rate of photosynthesis depend on different colour?
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Dear Dr Azad,
There are a few more aspects if I look at the answers given. Not all wavelengths are absorbed with the same efficiency. Green light is in this respect the least efficient. Several scientists have proposed that due to this inefficiency green light can penetrate deeper in a leaf and drive photosynthesis there. At the same time blue light is known to be absorbed by phototropins that can drive chloroplast movements and thereby affect the light absorption profile of a leaf on a minutes time scale. Red light does not do this. Phytochromes that are sensitive to red and far-red light are known to affect plant morphogenesis, etc. In other words, your question depends on the time scale considered.
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Does the shade of green in plants affect the rate of sunlight needed for survival. Can deeper green shaded plant tolerate more lowlight.
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Light, its intensity and quality, are factors that affect the concentration of different chlorophylls, especially the ratio of chlorophyll a to chlorophyll b. Plants that get abundant sunlight have less overall chlorophyll concentration and higher amounts of chlorophyll a than chlorophyll b. Plants that grow under shade, like those in densely forested areas, have a high overall chlorophyll concentration, but have more chlorophyll b than chlorophyll a.
Hybrid plants of maize, pearl millets and sorghum have more tolerance to shading stress (due to increased plant density) than those of open-pollinated varieties.
Under similar growing conditions, I did never emprically observe any difference in color intensity of leaves of hybrid and open-pollinated varieties of these crops. Therefore, dark green leaves appear to be a consequence of shading effect. I agree with J.D. Franco-Navarro and Francisca Higueras-Fredes
Best wishes, AKC
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I am working with photosynthesis, and I wanted jobs to compare my data, in periphyton communities the values are expressed in different ways, does anyone know any work in µmol O2 µg chl-a -1 h-1?
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Are you looking for photosynthetic ability of periphyton microbes..??. If so , , why not to compare with rhzisosphere microbes as well...
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Hi all,
we are looking to buy a photosynthesis meter that can potentially measure photosynthetic rate, stomatal conductance, CO2 assimilation, PS1 and PSII efficiency (if possible), etc. it would be great if the experts in the field can give their opinion that will save our time and money. please drop a link if you know about something.
Thanks
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فتوسنتزمتر
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If we are serious about feeding the world's growing population, and to grant food security for the next generations, we must think about boosting food production without ruining our planet.
One of the avenues being recently explored is the improvement of photosynthetic capacity by installing the C4 photosynthetic pathway into C3 crops.
By increasing the photosynthetic capacity, crops with an enhanced photosynthetic mechanism would better utilize the solar radiation that can be translated into yield.
I want to know how can we insert a C4 photosynthetic pathway into C3 ? And what are the disadvantages of this technique !?
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I think that changing the C3 plants to C4 will require large genetic and physiological resources to make the most of the unit of land and water in the long term, but it is possible in the short term to do some easy and simple methods for this purpose, which is to growing C3 plants with C4 in the same land
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I am planning to buy a Photosynthesis System. Can you recommend me which instrument is the best?
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CID Photosynthesis System
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Hello, I hope somebody could help in clarifying this point.
I am following an experiment on young olive plants in southern Italy, and I will take chlorophyll fluorescence measurements using a Fluorpen (PSI).
I will use the OJIP protocol and I am in the process of setting the saturating light intensity: I understand that in order to obtain proper Fmax measurements in dark adapted samples, one should make sure that the intensity of the initial flash of high intensity light is strong enough to temporarily close all Reaction Centers.
My questions is: which is the procedure to find the saturating light intensity ?
I already performed a series of OJIP measurements setting the light intensity from 300 to 3000 micromoles of PAR but it is not clear for me which value I should choose.
According to the Fluorpen instruction manual, one should choose the light intensity which results in the maximum Fv/Fmax ratio.
In my case this occurs at 1200 micromoles of PAR, while this ratio decreases at higher sat pulse intensities.
I also found a different suggestion in a recent review by M. Tsimilli-Michael (Revisiting JIP-test, Photosynthetic 57, 90.107, 2019): to test different light intensities (I) and to select the value for which Fpeak/I gets saturated. In my case this ratio reaches a peak at 1200 micro moles of PAR after which it starts decreasing, but I cannot see it reaching a steady value.
Am I following the right procedure ? Actually, I am not sure that 1200 micro moles could actually be a strong enough light to close all RCs in olive plants, since the “midday" PAR intensity can be over 2000 in this season.
I am looking forward to reading your comments.
Thank you
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Dear Stefano,
On the one hand, the manufacturer should provide the PAR value emitted by the diode. On the other hand, you can visit colleague at the nearest physics / optics department and ask for an exact measurement for your instrument. You can also try to measure with an ordinary PAR meter, although the measurement will be probably burdened with a significant error. Either way, if you measure a value above 3000 everything is ok.
Plants have evolved in sunlight (~2000 PAR), so 3000 and more are likely to saturate the photosynthetic apparatus.
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I have an experiment in which I want to estimate the photosynthetic activity and carbon dioxide flux of wheat plant. However, in my institute does not have potable photosynthesis equipment. Is there any institute in Northern India from where I can hire this device on a payment basis. The device will be needed on a thirty days interval for six months. Is there any institutes which provide this facility?
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Many Icfre institutions also have PP systems. You may contact them for more info.
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Will the plant become poisonous when increased in reception of cosmic rays?
The plant's food is converted into photosynthesis
Through this process, excess radiation is received, which intends to convert it into toxic substances
These substances affect a person if he consumes the plant and results in cancers and other diseases
The affected areas are the mountainous and northern regions
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In order for cosmic rays to arrive at the surface of the earth, you have to get rid of the solar wind (which blocks cosmic rays) something not likely to happen.
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I am interested in locating nutrients important for photosynthesis. How can I locate them in lemongrass leaf using SEM or some other protocol.
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Plants utilize light as a source of information in photomorphogenesis and of free energy in photosynthesis, two processes that are interrelated in that the former serves to increase the efficiency with which plants can perform the latter. Only one pigment involved in photomorphogenesis has been identified unequivocally, namely phytochrome. The thrust of this proposal is to investigate this pigment and its mode(s) of action in photosynthetically competent plants. Our long term objective is to characterize phytochrome and its functions in photosynthetically competent plants from molecular, biochemical and cellular perspectives. It is anticipated that others will continue to contribute indirectly to these efforts at the physiological level. The ultimate goal will be to develop this information from a comparative perspective in order to learn whether the different phytochromes have significantly different physicochemical properties, whether they fulfill independent functions and if so what these different functions are, and how each of the different phytochromes acts at primary molecular and cellular levels.
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I am interested in locating nutrients important for photosynthesis. How can I locate them in lemongrass leaf using SEM or some other protocol.
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Dear Riya Mehrotra,
Hi, SEM is often used to view the surface characteristics and properties of organs. You must use TEM to view intracellular organelles.
Best regards,
Saeed
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Hello all,
Wish to know the detail working of a plant photosynthesis meter (infrared gas analyser) with special reference to
1. Controls that are used for analysis
2. Time of Measurements of photosynthesis i.e. before placing the leaf and after placing the leaf (stability check)
3. Analysis of the data obtained.
Request for these with special reference to the IRGA CIRAS3.
Thanks,
Balasubramanya Sharma
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Thank you for the response. Yes, we are using a CO2 cartridge and it helps. We do not have a LED light source and hence this was the main reason for the variation. We are in the process of procuring the light source.
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What are the current advances in techniques of remote sensing for either photosynthesis or gas exchange evaluations? What are the most promising systems? Any relevant aspect that differentiates the methods applied for a local and global scale will be very welcome.
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Recent findings in my lab showed that optical sensors measuring chlorophyl concentration give better results relative to indices such as NDVI. Chlorphyl concentration measurmements were comparable to fAPAR ( Fraction of Absorbed Photosynthetically Active Radiation) measurements.
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Hello everyone,
I have been googling quite a bit but without much success but I would say someone had to have the same problem before. What I am doing is pretty much proteome-wide (translated CDS) alignments of >60 species, many of them non-model ones, to identify changes in coding regions possibly related to different photosynthesis strategies. Of course I have a list of "favourite" genes the, alignments of whic I can check manually. But I want to compare in a more non-target way to hopefully find some new genes we have not been considering as relevant so far. How can I proceed to identify such cases, e.g. new domains or amino acid substitutions occurring in a subset of species in a mremore automated way?
Is there a tool doing exactly that? Or a way to achieve this with a script (in the best case with R)?
Thank you for your suggestions.
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What is you actually want to do?
Because in your question it seems you want to do a lot of things which does not seem to be done as one thing.
1. How to identify differences across a big number of long protein alignments?
>> Do you mean difference within one alignment (single protein), or differences across different alignments (several proteins)?
2. You are also thinking about finding new genes, that is a bit different approach.
If you can enlist exacly what you want to do, it would be easier to answer.
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I will be cryo-fixing a variety of plant species (woody eudicots) for ultrastructure studies via transmission electron microscopy. Previously, I have used standard chemical fixation techniques, which have not provided optimal morphology preservation. Given that cryo-fixation may be better suited for preservation and eliminating artifacts, I am interested in maximizing leaf sucrose content (sucrose serves as a cryo-protectant) in order to minimize crystal formation.
In the past, my lab has left plants in our dark room overnight (16 hours) to allow for starch degradation. My thought is that degradation of starch for chemical fixation is ideal, as starch decreases fixation penetration efficiency and time. In the context of cryo-fixing, I would guess that maximizing starch content is ideal as this will allow for faster freezing.
Any thoughts or suggestions on minimizing artifacts with cryo-fixing plant tissues would be greatly appreciated!
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Dear Sirs, if you agree with a contribution on this forum you can show your appreciation by recommending an answer or a question.
Now please stop diluting actual information with your spam answers.
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Main aim is to make Egyptian rice consume less water as it is a plant that requires to be flooded in water in order for the C3 photosynthesis to start. This proposal is for college and it aims to solve the water scarcity problem in Egypt and its effect on agriculture and limiting the water demanding crops such as Rice. Feel free to provide me with any thoughts, advice, sources, or genome editing tools.
thanks
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No. Maybe uplland rices resistance to Pyricularia leaf blight. But on soybeans I know many geens to target. Sorry.
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Please I need How Can I make the determinations?
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Dear Yoslen
Chlorophyll mainly determines the photosynthetic rate and primary productivity in plant. Chlorophyll content will be changed with the change of external environment, which could further lead to the photosynthetic capacity change. Therefore, chlorophyll content could be used as an important diagnostic indicator for plant growth study. The assessments of chlorophyll contents are based on the extraction of chlorophyll with solvents from the destructive leaf followed by spectrophotometric determination.
Li, Y., Sun, Y., Jiang, J. et al. Spectroscopic determination of leaf chlorophyll content and color for genetic selection on Sassafras tzumu. Plant Methods 15, 73 (2019).
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Using a Horiba FluoroMax - just getting going on this procedure for the first time and can't find any explicitly clear literature online.
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Some statements in Literature (Jennings et al., 2005; 2006; 2007) suggest the possibility that the second law of thermodynamics might stand in contradiction to the primary photochemistry of plants. Such an opinion seems to be rather challenging, if not to say wrong.
The necessary rise of the overall entropy when a plant grows is correlated with dissipation of energy into the environment. If a system absorbs photons and then relaxes to a final state emitting more photons than previously absorbed (in particular the production of phonons or any bosons fullfills the necessary increase of entropy) then the final state can be of lower entropy than the initial state in full accordance to the second law of thermodynamics because the environment has taken up entropy. I am currently searching for a quantitative analysis of this problem.I know (Lavergne, 2006) however the final discussion does not seem to be completely finished.
Jennings R.C., Engelmann E., Garlaschi F., Casazza A.P., Zucchelli G. Photosynthesis and negative entropy production, Biochim. Biophys. Acta, 2005, Vol. 1709, p. 251.
Jennings R.C., Casazza A.P., Belgio E., Garlaschi F.M., Zucchelli G. Reply to commentary on: Photosynthesis and negative entropy production, Biochim. Biophys. Acta, 2006, Vol. 1757, p. 1460.
Jennings R.C., Belgio E., Casazza A.P.,Garlaschi F.M., Zucchelli G. Entropy consumption in primary photosynthesis, Biochim. Biophys. Acta, 2007, Vol. 1767, p. 1194 Lavergne J. Commentary on: Photosynthesis and negative entropy production by Jennings and coworkers, Biochim. Biophys. Acta, 2006, Vol. 1757, p. 1453.
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Pleas read the paper " Photosystem I, when excited in the chlorophyll Q y absorption band, feeds on negative entropy
  • December 2017
  • Biophysical Chemistry 233
  • It is a clear, though limited, case of entropy consumption.
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Hi,
I am looking for a list of plants that utilize CAM photosynthesis. I have been searching but seems like I am missing something, anyone came across this? perhaps a document?
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Could you please look at this website:
Best regards,
Quynh Nguyen
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I am using FluorPen FP 100 (PSI, CZ) for measuring OJIP transients of various Panicum antidotale grass accession collected from various locations to assess their potential for drought tolerance. Of various JIP-test parameters, computed parameters are Phi_Pav, Pi_Abs. I assume that these two parameters are related with performance index. However, on our manuscript the reviewer commented that you have to take measurements two times for the calculations of performance index which is most suitable. 
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Hy dear Habib Athar
you can use of this article and words that i sent for you.
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In several research papers including review articles, it has been mentioned that under non-stressed or optimum growth conditions, the Fv/Fm of PSII should be in the range of 0.81-0.83 and stress conditions might reduce the value. However, elevated [CO2] generally stimulates photosynthesis and growth of C3 plants when nitrogen supply is not limited and air temperature is within the optimum range for growth. Can Fv/Fm also increase beyond 0.83 in that case (High CO2 & N under optimum temperature) especially when taken early in the morning (8 - 11 am) after 20 min dark-adaption?
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Thank you.
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I need structural differences as well as functional differences for the three types of photosynthetic plants and how they carry out photosynthesis
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Hi
In the attached article, you can get some good information on comparing photosynthesis of C3, C4 and CAM plants.
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It is known that water in the hydrogel is bound.
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If the size of a small water system (confinement) coincides with that of a semiconductor, then the photocatalytic decomposition of water is enhanced. Quantum entanglement seems to be happening. This is the subject of our patent application.
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The increase in plant biomass during feeding depends on the intensity of chlorophyll photosynthesis, and the NDVI is too coarse for this index - it poorly follows the high chlorophyll content and gives “duplicate” -identical values for different spectra (15-26% on wheat crops)
What alternative NDVI more accurate indices (photosynthesis rate-chlorophyll concentration) were found?
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In our region (drylands), we found that the results of the MSAVI2 and GDVI indices are working better than the NDVI.
Good luck and best regards.
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Hi all
I am meeting a problem of measuring light response curve with Licor LI-6400XT. When everything is ready, the leaf temperature (Tleaf) displayed in LPL screen goes up to around 70℃ as the lamp (LED source) is turned on, but will go down to room temperature (around 20℃) as the lamp is turned off. The Tblock and Tair remain at room temperature no matter the lamp is turned on or off. Has anyone of you met the similar problem or had any possible solutions?
Thank you in advance.
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We had a similar problem. We ended up having a tiny break in the thermocouple wire which was used to measure leaf temperature. We ended up swapping it out and the problem was fixed right away. But Joshua is right, contact support, they will know exactly what to do
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Troposphere sphere contains 99℅ (by weight) of the total atmosphere. CO2 is water soluble and continuously washed during rain. Some CO2 is also get dissolved in surface water. A big percentage is trapped during photosynthesis. Still we blamed CO2 for global warming and climate change?
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Hello dear ,
I think that is troposphere
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I read in a book Environmental Chemistry that" in anoxic region of water bodies , some bacteria use sulfate ion as an electron receptor where as other bacteria reduce iron(III) to iron (II). These two products react to give a black later of iron (II) sulfide sediment. This frequently occurs during winter, alternating with production of calcium carbonate by product from photosynthesis during the summer. "
Can anyone help me understand why this phenomena occurs during summer and winter??
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Dear Samiksha,
during winter months when the water column is oxic, Fe oxide reduction only occurs in the strongly reducing sediment column. Reduced Fe(II) diffuses to the sediment-water interface where it is immediately oxidized to Fe oxide. As a result, there is no buildup of dissolved Fe in the water column during winter. In early summer the lake becomes thermally stratified. As summer progresses, oxygen is consumed by biological processes and the bottom waters become anoxic. Reductive dissolution of Fe oxide continues to occur in the sediments. Fe(II) diffuses into the anoxic bottom water and is oxidized at the oxycline forming a peak in particulate Fe in the water column. Below the oxycline, where the water is strongly reducing, dissolved Fe(II) is stabilized and its concentration increases with time. In early winter, mixing processes re-oxygenate the entire water column and Fe(II) is rapidly oxidized and precipitated.
After creating an account (free), you can read the article for free.
With best regards,
Johannes
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Several studies on the mechanisms of acclimation in C3, C4 and CAM plants to global changes such as temperature and CO2 level fluctuations are extensively discussed. There is no distinct separation on the reported effects between the three pathways due to the involvement of many factors when studying climate change and the distribution of species in biomes of varied climate patterns; lack of data and understanding of the concepts in climate change is often cited by researchers. Though if we were to generalize a specific pathway of photosynthesis as being the most positively associated with climate change, which pathway should be considered?
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With rise in temperature the productivity of C4 plants would increase, while those of C3 plants would decrease due to increase in rate of 'photorespiration'. Thus plants with C4 pathway of photosynthesis would be benefited from climate change.
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I want to measure photosynthesis rate of a wheat ear by IRGA. Which is the most suitable chamber for it? Since its 3 dimensional, how will the area of ear be taken care of
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Some more alternatives below. I have used a custom-made solution for measuring gas exchange in shoot apex in cucumber and tomato plants. Maybe relevant! Good luck!
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I grew Podocarpus seedlings at elevated temperatures for 16 weeks after which I ran temperature response curves using a Licor 6400 IRGA.
The optimum temperature for photosynthesis remained roughly the same for heat acclimated and none-heat acclimated plants, however, max photosynthesis decreased in the heat acclimated plants. The graph is attached!
Does anyone have an explanation for this?
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Besides other parameters mentioned by Kathryn, did you look at stomatal density?
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I've run multiple RLC's (6 reps for each of; 3 seagrass species, 5 time periods and 6 treatments). I'm am looking for a R script that can pull out the slope, ETRmax and saturating irradiance parameters.
Thank you for your help.
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Hi, here is R code for building a loop which fits a light curve model (Platt et al. 1980) to the data, extracts the coefficients into a data frame and plots the results into tiff files (one file for each fitted curve) using "phytotools" package mentioned above. This is largely based on the code examples provided by the authors of the phytotools package. One should be able to fit the other models in the package also by modifying the plot and fitting sections of the script (model equations I think are specified in phytotools documentation). This is a bit late answer but I'll upload it in any case if someone still finds this useful.
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As we seen that everincresing problems of GHG those affecting plant biological activities sp. Photosynthesis etc. Any mechanism or way in which can we make crop plant tolerant.
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In general crop rotation reduces the green house gasses, for example corn rotate with soyabean or wheat is found to be very effective in reducing GHG.
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Hello,
Do you think using colorimetric methods to investigate the type of photosynthetic mechanism might be appropriate?
What methods do you recommend other than Spectrophotometry and HPLC methods? I would like to know your suggestions.
Thank you
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I think GC-MASS teqniqu may be useful.
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Is it growth parameters & biomass yield, photosynthetic pigments, nutrients, compatible solutes, photosynthesis, enzyme activities,ultrastructure?
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Thank you very much Drs for your valuable contributions. I greatly appreciate it.
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What is the key mechanisms of biostimulant and also calcium application on stomatal conductance and photosynthesis of plants under water stress condition?
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If I assume biostimulants as osmoprotectants, then effect shall be as under.These osmoprotectants such as glycine betaine,Thio urea and Salicylic Acid help to trap harmful radicles produced in plants in response to water or heat stress.These chemicals temporarily squeeze these harmful ions but this effect prevails only for short duration droughts but not useful under prolonged stress conditions.
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It is difficult to work on crops and chances of successful experiments are very less, that is why we prefer these model organisms to study the mechanism and then apply the same knowledge on other crops. So, according to you, for different traits and developmental studies which is better?
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I have worked with Nicotiana tabacum and Arabidopsis thaliana. As for me tobacco is more easy culture to grow and work with. But for arabidopsis there is full genome and special resourse about genes and etc https://www.arabidopsis.org/
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Using a chlorophyll fluorometer (Mini-PAM; Walz; Effeltrich, Germany) I plotted ETR vs PPFD curves. What software / r package/excel sheet can I used to fit this data to a rectangular hyperbola model or other models.
Most literature focuses on fitting gas exchange data, not fluorescence.
Can the same models/excel sheets as created in Lobo et al. 2013 (Fitting net photosynthetic light-response curves with Microsoft Excel - a critical look at the models work?)
Suggestions are welcomed!
Thank you.
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You can use GraphPadPrism (PC & Mac), but it is not free (perhaps now there is a free lite version, at least they have a demo; see https://www.graphpad.com/scientific-software/prism/).
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I am trying to use paraquat (methyl viologen) to test a hypothesis related to my research on chlorophyll fluorescence. Most of the literature on paraquat that I've seen (at least to study photosynthesis) uses thylakoid suspensions. I'm not having much luck using it on whole diatom cells and I was wondering if anyone had any advice.
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So after some experimenting I discovered that an incubation time of at least one hour was necessary to see results. After that, fluorescence didn't show any further change. I'm leaving this answer for any who has the same question I did.
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In immobilized algae beads, nutrients such as NH4 and PO4 get adsorbed by the immobilizing matrix (such as alginate), following which they are assimilated by the microalgae via process of photosynthesis. In most research studies, the removal of nutrients by immobilized algae beads is much higher than blank beads. So is the assimilation process faster than the adsorption process?
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It more complex then rate perse. When algae (or any living organism) assimilate nutrients they convert simple, small molecules (here NH3 and PO4) to large complex molecules (proteins, nucleic acids etc), and finally to new cells. The absorption on the alginate is a much simpler process. Furthermore, given the above the alginate (or any other absorbing material) will reach saturation much faster as there is no conversion. Thus the rate of alginate (absorption) + micro-algae (assimilation) will be much faster.
And two small correction:
(i) Photosynthesis of micro-algae does not assimilate NO3 or PO4 directly. It provide the cells with a carbon source. The oxygen produced by the water splitting in the photosynthetic could result in oxidation of NO3 to nitrate though.
(ii) The process does no have to go "absorption in alginate --> assimilation". Depending how you make them the alginate beads can be pretty pours.
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The figure cannot be 8 ot 9 like in oxygenic photosynthesis because NADPH2 is made by reverse electron flow in RC-2 type PS Bacteria.
Any help would be appreciated.
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The figure roughly calculated in our paper Larkum, Ritchie and Raven 2018 is around 16. This based on how much ATP & NADPH2 is needed to fix CO2 and that PS bacteria have only one photosystem and the roundabout way PS bacteria have to make the ATP + plus NADPH2 required.
The measurements needed have largely not been seriously attempted for about 50y.
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I will like to know how one can model photosynthesis, and the different parameters that is important for modeling photosynthesis
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Dear
Gergino Chounna Yemele read below the attached file which title is "Mathematical modelling of natural and artificial photosynthesis "
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I am trying to measure photosynthesis of citrus (grapefruit) using Licor 6400XT. The problem is I am getting negative values. I tried with several other plants including weeds but I am not getting a positive result. I performed all the task like warming up, however, the reading is still negative. Please advice...
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