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Solvent System
crystallisation technique
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According to a post on **ResearchGate**, the best method to grow crystals for organic heterocyclic compounds is to first dissolve the compound in either ethyl acetate or acetonitrile or DMF by warming, allow it to cool in the freezer for 24 hours or more time. You will get the crystals (https://www.researchgate.net/post/Can_anyone_please_suggest_the_best_method_to_grow_the_crystals_for_organic_compounds).
Another method that works well is to dissolve 50-100 mg of each compound in small (5 mL) vials in the minimum amount of organic polar solvent (https://www.researchgate.net/post/Can_anyone_please_suggest_the_best_method_to_grow_the_crystals_for_organic_compounds).
The **Center for Xray Crystallography** suggests that evaporation is the most common methodology for crystal growth. This involves simply evaporating solvent from the solution of the compound until saturation is reached and crystals form. However, this method is not the best and often leads to ugly crystals since the crystals tend to grow on the surface of the vessel (https://xray.chem.ufl.edu/helpful-information/crystal-growing-tips/).
I hope this information helps you. Let me know if you have any other questions.
Source:
(2) Crystal Growing Tips - The Center for Xray Crystallography. https://xray.chem.ufl.edu/helpful-information/crystal-growing-tips/.
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Urea is synthetically prepared it should be inorganic. Why we called it organic?
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Urea is classified as an inorganic fertilizer. It is a synthetic compound that is manufactured through a chemical process, primarily using ammonia and carbon dioxide. Urea is widely used in agriculture as a nitrogen fertilizer because of its high nitrogen content. It dissolves easily in water, making it convenient for application to plants. While urea can be derived from organic sources, the final product itself is considered an inorganic compound.
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Can GMOs be used in organic products?
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Certainly! In the world of organic products, genetically modified organisms (GMOs) have no place. The rules and regulations laid down by various organic certification bodies, like the United States Department of Agriculture (USDA) National Organic Program and the European Union Organic Farming Regulation, clearly state that GMOs are not allowed in organic farming.
Organic farming puts a strong emphasis on natural and traditional farming methods that prioritize biodiversity, ecological balance, and the use of organic inputs. This means steering clear of genetically modified seeds, crops, or any other organisms that have undergone genetic modifications in the production of organic goods.
Organic farmers have a responsibility to use organic seeds, which are completely free from genetic modifications and GMOs. If genetically modified seeds or crops were introduced into organic farming practices, it would lead to the loss of organic certification for the affected products.
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Hello everyone. I have studied pesticides in different high impacts factor research articles and found that herbicides, fungicides, and insecticides are the categories of pesticides organic compounds. but my mentor is not satisfied. could anyone help me to distinguish pesticides from herbicides?
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On a holistic approach, herbicides are commonly used to eradicate unwanted plants in managed lands ( therefore, weeds and invasive plants are targeted in case of managed agricultural or garden lands). On the other hand, pesticides target harmful (hence unwanted) insects in same land use patterns in order to primarily obtain optimum crop yield.
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Urea is considered an organic fertilizer. Organic fertilizers are derived from natural sources, such as plants, animals, or minerals, and they provide nutrients to plants in a slower, more natural manner compared to synthetic or inorganic fertilizers. Urea is organic because it is derived from organic materials, specifically from the breakdown of proteins in animals or plants. It is a nitrogen-based fertilizer widely used in agriculture to provide plants with a readily available source of nitrogen, which is essential for their growth and development.
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Urea added in soil on hydrolysis gives inorganic compounds ammonia and carbon dioxide. Ammonia is converted to ammonium ions and then to nitrate ion which is uptaken by plants. Products formed in all these steps are inorganic species which justifies its inorganic character.
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Dear Respondents
I am pursuing Ph.D. on the topic "Marketing of organic farm produce"
One of my objective is to compare marketing practices of selected organic producers and marketers.
Is there any scale available for comparison of marketing practices of organic farm Producers and Marketers?
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previous research will definitely help you to formulate criteria for analysis
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By which instrument or any other testing method
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There are NO differences between "synthetic" and "organic" ethanol. THE MOLECULE IS THE SAME and ethanol is an organic compound!
If you referr raw material (ethanol obtained by chemical synthesis or e.g. from fermentation processes) you can find (by analytic techniques) differences in the inpurities that accompaign the compound, NOT in ethanol itself!
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Hello everyone.
I wanna investigate the flow properties within the organic parts of the human body. I'd greatly appreciate your guidance on how to effectively model this in a 3D CAD tool. Are there any specific software recommendations for this purpose? I'm particularly interested in designing the lungs and heart from scratch.
Additionally, I'm curious if it's feasible to extract information from alternative sources like MRI or other data. Can anyone shed light on this aspect? If anyone could assist me in locating a solid model for my project, I would be immensely grateful.
Thank you all in advance.
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There are generic solid anatomical models available from companies like Zygote 3D (see https://www.zygote.com/cad-models ). Of course these represent the heart at only one phase of the cardiac cycle.
To capture the motion of the heart, you will need a gated CTA scan (CT angiography triggered by an ECG to capture different phases). To get the STL (mesh) files described by Seyed Mohammad Mousavi you will need to segment the structures of interest with a software like Mimics or 3D Slicer. Then you will need to clean them up and surface them (e.g. with NURBS) to export STEP or other solid model format that you can import into your simulation software. You can use software such as Geomagic, Rhino or MeshMixer for cleanup and export of STEP files.
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Hello, I'm currently doing experiments on microbial fuel cell. I am using two interconnected chambers (anodic and cathodic) for my mfc, separated by a Nafion-117 membrane.
As the catholyte, i used potassium permanganate 30mM (pH 7) in the cathodic chamber. I added nothing except the microbe culture and organic substrate (as the microbe's food) to the anodic chamber. The anodic solution was clear at the start, until i noticed something brown passed through the membrane into my clear anodic solution.
What could the "brown matter" possibly be? Is there anything i could do to prevent it from happening as i am worried that it might affect the microbes and the organic matters i am currently studying about in the anodic chamber.
Thank you in advance. I highly appreciate every response to my question.
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Permanganate is a powerful oxidizer of organic mater, maybe your microorganism is producing something that is reacting with it. Or maybe your permanganate is being reduced to MnO2 (brown color). So many things that could be happening.
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by which method?
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organic ethanol means produced by fermentation process, Where as synthetic ethanol means produced by the acid-catalyzed hydration of ethylene. or any other synthesis process.
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comparison of fractions from powdered plant sample and an organic solvent extract
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When you use the organic solvent extract for fractionation with different polarity solvents, the main problem is the solubility of the extract in water. As non-polar compounds are not fully soluble in water, which may cause yield loss of the extract.
In the case of fractionation from powdered plant samples, you can overcome this problem.
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Can organic or natural ingredients be used in concrete mixes?
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Roman concrete, also called opus caementicium, contains ox blood, milk, horse hair. The recipy was used during centuries.
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When we add organic matter in the form of biochar or compost to acidic soils, the organic materials decompose and release alkalinity such as carbonates, organic anions, inorganic anions, organic surface functional groups, and other organic compounds to the soil to neutralise acidity and raise soil pH. However, all the organic compounds generated from organic materials are not soluble in water to raise soil pH.
Which of these organic compounds or others not mentioned here, which are derived from organic materials, are soluble only in acids such as 0.5 M HCl and which of them are soluble in water as well?
I appreciate your time to answer this discussion question.
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Manpreet, you provided with a detail outlook into the organic compounds solubility. Can we say all organic compounds with phenolic functional groups soluble in both HCl and water?
I read that organic compounds with acid or base functional groups as well as amines are not soluble in water. Anyone who can help in this idea please.
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When we add organic matter in the form of biochar or compost to acidic soils, the organic materials decompose and release alkalinity such as carbonates, organic anions, inorganic anions, organic surface functional groups, and other organic compounds to the soil to neutralise acidity and raise soil pH. However, all the organic compounds generated from organic materials are not soluble in water to raise soil pH.
Which of these organic compounds or others not mentioned here, which are derived from organic materials, are soluble only in acids such as 0.5 M HCl and which of them are soluble in water as well?
I appreciate your time to answer this discussion question.
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Hi Salim,
Thank you for your answers.
Are the metal salts of organic molecules, carbonate, and ions that are soluble in water do not soluble in HCl?
Besides, are the nitrogen components only soluble in HCl?
I am trying to differentiate organic compounds that are soluble in HCl but not in water, and vice versa.
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Any handling hazards? Is it safe?
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The biggest hazard by far is its extreme flammability. CS2 is borderline pyrophoric - it ignites at 90°C - and because the vapor is heavier than air it can flow to an ignition site and then flash back to the vapor source. A 1.3% concentration in air is explosive.
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Can Artificial Intelligence and Big Data Analytics help in the development of sustainable organic agriculture based on planning, arranging and managing biodiverse, multi-species crop agriculture?
In your opinion, can the new technologies of Industry 4.0, including especially artificial intelligence, machine learning, deep learning applied in combination with big data, information and knowledge collected and processed on Big Data Analytics platforms help the development of sustainable organic agriculture based on planning, arranging and managing biodiverse, multi-species crops of agricultural crops?
The process of planning, designing, arranging sustainable crops of agricultural crops grown according to the formula of organic agriculture, which aims to restore highly sustainable, biodiverse natural agricultural ecosystems, should take into account many factors that are a mix of natural biotic, climatic, geological and abiotic factors and changes in these factors that have taken place over the last centuries or millennia within the framework of the development of human, unsustainable civilisation, the development of a robber economy based on intensive industrial development with ignoring the issue of negative externalities towards the surrounding environment.
Considering how this should be a complex, multifaceted process of planning, designing, managing and restoring highly sustainable biodiverse forest and sustainable agricultural ecosystems, the application in this process of new generations of Industry 4.0 technologies, including, above all, artificial intelligence based on large sets of data, information and knowledge concerning many different aspects of nature, ecology, climate, civilisation, etc. collected and processed on Big Data Analytics platforms may prove to be of great help.
In view of the above, I address the following question to the esteemed community of scientists and researchers:
In your opinion, can the new technologies of Industry 4.0, including, above all, artificial intelligence, machine learning, deep learning applied in combination with large data sets, information and knowledge collected and processed on Big Data Analytics platforms help the development of sustainable organic agriculture based on the planning, arrangement and management of biodiverse, multi-species crops of agricultural crops?
Can artificial intelligence and Big Data Analytics help in the development of sustainable organic agriculture?
What is your opinion?
What is your opinion on this subject?
Please respond,
I invite you all to discuss,
Thank you very much,
Best wishes,
Dariusz Prokopowicz
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Of course, because AI and data analytics is the future in all realms of research, whether ecology or accounting :)
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Hello,
I am looking for a protocol to determine the fermentable organic dry matter from biogas plants samples.
Thank you in advance for your help.
Best regards
Sonia
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Thanks for your answers.
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Hi,
I am trying to determine 4beta-hydroxycholesterol in plasma. It is endogenous, for this reason I need to use a surrogate matrix (1% BSA) but I have problems with this protein.
1. In the first step, to hydrolyze the I incubate BSA + KOH 1M for 2 Hours at RT.
2. Then I have carried out the extraction using 1 mL of water + 2 mL of hexane.
The problem is that BSA gels in this conditions and I can not separate organic and aquos phase.
I was wondering if somebody could help me.
Thanks a lot!!!
Best wishes,
Kika
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Thansk a lot. Eventually the problem was not the BSA. I have a problem working with glass tubes. The reaction to remove the cholesterol (KOH 1 M) is very strong and it seems to affect to the glass...If I carry out the reaction in eppendorf I do not have problems.
Thanks a lot for your time!
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I bought indium nitrate hydrate (alfa aesar - purity 99.99%) which is said to be water soluble. However, it does not dissolve well both deionized water and organic solvents, above 20 mM.
Could you please tell me the reason for this?
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Dear friend Boeun Choi
Indium nitrate hydrate is said to be water soluble, but it does not dissolve well both in deionized water and organic solvents above 20 mM. One possible reason for this is that the indium nitrate hydrate is not pure (4.4 Solubility - Chemistry....). Another possibility is that the indium nitrate hydrate is not being dissolved properly. You can try dissolving it in hot water or by adding a small amount of acid (Indium(III) nitrate 99.9 trace metals...).
I hope this helps! Let me know if you have any more questions.
Source:
(1) Indium(III) nitrate 99.9 trace metals 207398-97-8 - Sigma-Aldrich. https://www.sigmaaldrich.com/US/en/product/ALDRICH/326135.
(3) What Happens When Salt Is Added to Water? | Sciencing. https://sciencing.com/happens-salt-added-water-5208174.html.
(4) How can i dissolve Sodium Nitrate in organic solvents?? - ResearchGate. https://www.researchgate.net/post/How-can-i-dissolve-Sodium-Nitrate-in-organic-solvents.
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In stale seed bed technique, before sowing the field was irrigated and favoured for germination of weeds after few days the nonselective herbicide was sprayed to kill the weeds then crop was sowed after tillage. In organic farming herbicide is not recommened so how this technology practicesed in organic farmimg?
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Thank you mam Sarah Cook
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I want to carry out a reaction in which I want to replace the chlorine of alkyl chloride with the OH group. What would be the best possible synthetic route to follow?
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I do not think you need KMnO4, KOH or NaOH should be ok, you need to use a solvent which can dissolve both alkyl chloride and KOH.
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Without inorganic fertilizers, soils of less to moderate fertility can only produce substantially reduced crop yield specially of cereals. In many parts of the world these soils are prevalent. Because of long time use soils in many places lost their vigor, vitality and productivity. In this circumstance, can organic agriculture sustainably feed the world in 2050?
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Organic agriculture can contribute to feeding the world sustainably in 2050, but it may not be able to do so alone, especially in regions with less to moderate fertile soils. While organic farming can produce high-quality crops, it generally has lower yields compared to conventional agriculture, which can limit its potential to feed the world's growing population.
However, organic agriculture can improve soil fertility and biodiversity, which can help to increase crop yields over time. Organic farming methods such as crop rotation, cover cropping, and composting can help to replenish soil nutrients, improve soil structure, and reduce soil erosion. These practices can also improve the water-holding capacity of soils, making them more resilient to droughts and other extreme weather events.
Additionally, organic agriculture can help to reduce greenhouse gas emissions and mitigate climate change. Organic farming methods generally require less energy and rely on fewer external inputs such as synthetic fertilizers and pesticides, which can help to reduce greenhouse gas emissions associated with agriculture.
I think that while organic agriculture can make a significant contribution to sustainable food production, it may not be able to feed the world alone, especially in regions with less to moderate fertile soils. A combination of approaches, including organic agriculture, conventional agriculture, and agroecological practices, may be necessary to sustainably feed the world in 2050. Additionally, improving soil health and fertility through sustainable farming practices should be a key priority to increase agricultural productivity and resilience to climate change.
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I did the MD simulations of my interest of protein with some organic molcules like Riboflavain and they making cluster near the protein and i want to find different cluster size vs probability distribution graph of organic molecule.
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Hello;
you can use Hierarchical clustering following these steps.
  1. Perform Hierarchical Clustering: Apply the Hierarchical Clustering algorithm to your dataset of organic molecules near the protein. This algorithm builds a hierarchical structure of clusters by iteratively merging or splitting clusters based on their similarity.
  2. Determine the Number of Clusters: Use a suitable method, such as the dendrogram or a criteria like the elbow method or silhouette score, to determine the optimal number of clusters in the hierarchical structure. This will help you define distinct clusters for further analysis.
  3. Assign Cluster Labels: Based on the identified number of clusters, assign cluster labels to each organic molecule in your dataset. Each molecule will be associated with the label of the cluster it belongs to.
  4. Calculate Cluster Sizes: Count the number of organic molecules in each cluster to determine the cluster sizes. This step will provide you with the count or size of each individual cluster.
  5. Probability Distribution: Plot a probability distribution graph to visualize the frequency or probability of different cluster sizes. The x-axis represents the cluster sizes, and the y-axis represents the probability or frequency of occurrence of each cluster size.
  6. Normalize the Distribution: Normalize the probability distribution by dividing the frequency or count of each cluster size by the total number of clusters. This normalization step will give you the relative probability of each cluster size, facilitating comparison and interpretation.
  7. Plot the Graph: Generate a graph that depicts the probability distribution of different cluster sizes. You can use a bar plot, histogram, or line plot to visualize the distribution.
  8. Interpretation: Analyze the probability distribution graph to understand the different cluster sizes and their probabilities. Look for peaks or modes in the distribution that indicate the most common or dominant cluster sizes. Calculate statistical measures such as mean, median, and standard deviation to further characterize the cluster size distribution.
there are other type of clustering such as K-means Clustering but this consider a traditional method, so if you doing these steps for publishing a paper it would be better to use different method than k - means, or build k-means with Hierarchical Clustering, Gaussian Mixture Models (GMM), then compare the result of all the three methods.
if you are doing that for homework just use k - means
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have calculated the hyperpolarizability of molecule urea with gaussian in perpus of comparing with some organic compounds using the keyword polar=dcshg with 1064nm as frequency but i get an extra large value of 0.90 ×10^^-30 u.s.e compared to values noticed in articles 0.37×10^^-30 e.su , where is the problem ?. Thanks
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@lamia fatima thank you so much
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I need to calculate theoretical CD-spectra of a few organic compounds. I never dealt with CD-spectroscopy nor I have any experience with theorethial calculations. Still I hope that there is a software designed to solve this issue.
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Thanks
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Organic solvents destroy the Ag/AgCl chloride electrode.
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Dear friend Maryam Amoo
Polypyrrole can be dissolved in organic polar solvents such as DMF (dimethylformamide), NMP (N-methyl-2-pyrrolidone), DMSO (dimethyl sulfoxide) and m-cresol (EP0804497B1 - Soluble, electroconductive polypyrrole and....). However, organic solvents can destroy the Ag/AgCl chloride electrode (Which solvent should we use...). I hope this helps!
Source:
(1) Which solvent should we use to solubilise the polypyrrole?. https://www.researchgate.net/post/Which_solvent_should_we_use_to_solubilise_the_polypyrrole2.
(2) Solvent effects on the characteristics of soluble polypyrrole. https://www.sciencedirect.com/science/article/pii/S0379677999002672.
(3) Doped polypyrrole with good solubility and film forming properties .... https://www.sciencedirect.com/science/article/pii/S2214785318316456.
(4) EP0804497B1 - Soluble, electroconductive polypyrrole and method for .... https://patents.google.com/patent/EP0804497B1/en.
(5) Which solvent is suitable for polypyrrole? | ResearchGate. https://www.researchgate.net/post/Which-solvent-is-suitable-for-polypyrrole.
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I am working in the above mentioned fields and looking for a serious research collaboration. The nature of collaboration will not only be limited to publishing joint research articles but will also include joint submission of research proposals, student and faculty exchange programs through signing of MoUs by involving our respective institutions if possible.
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Yes I am willing for this MoU
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How does tillage help in preventing evaporative loss from soil and tillage enhances decomposition of organic matter and positive effects of reduced tillage?
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Plant adaptations to conserve moisture include wilting to reduce transpiration. Also, small leaves, silvery reflective leaves, and hairy leaves all reduce transpiration by reducing evaporation.Plant adaptations to conserve moisture include wilting to reduce transpiration. Also, small leaves, silvery reflective leaves, and hairy leaves all reduce transpiration by reducing evaporation. Wind is one of the most important factors that affect the rate of evaporation from water surfaces. Planting of trees normal to the direction of windward is an effective method for reducing of evaporation losses. The most effective solution to high evaporation losses of soil water is a cover of plant residues on the soil surface. Agronomic practices that increase shading of the soil surface, and physical structures that concentrate rainwater, encouraging percolation to deeper layers, also reduce evaporation losses. Evaporation of water from the soil is reduced when reducing tillage because with more residues, less solar energy reaches the soil surface and wind speed is reduced at the soil surface. Tillage increases the oxygen content of the soil, stimulates soil microbes to decompose soil organic matter and breaks up soil structure that can protect organic matter from decomposition. Tillage is one of the major practices that reduce the organic matter level in the soil. Each time the soil is tilled, it is aerated. As the decomposition of organic matter and the liberation of C are aerobic processes, the oxygen stimulates or speeds up the action of soil microbes, which feed on organic matter. However, tillage has all along been contributing negatively to soil quality. Since tillage fractures the soil, it disrupts soil structure, accelerating surface runoff and soil erosion. Tillage also reduces crop residue, which help cushion the force of pounding raindrops. Organic matter improves soil structure, which results in increased water infiltration following rains and increased water-holding capacity of the soil; it also enhances root growth into more permeable soil. This results in better plant health and allows more movement of mobile nutrients to the root.
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What is the importance of conservation tillage in organic farming and effects of tillage on the soil and environment?
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Conservation tillage does not loosen or invert the soil; it leaves vegetation in place to help prevent wind-erosion losses. Crop residues on the soil surface reduce wind velocity and the ability of wind to move soil particles. Conservation tillage in organic farming combines the principles of organic farming with the benefits of soil erosion control achieved by the conversion from ploughing to either reduced tillage or no-tillage/direct-seeding. Since tillage fractures the soil, it disrupts soil structure, accelerating surface runoff and soil erosion. Tillage also reduces crop residue, which help cushion the force of pounding raindrops. Without crop residue, soil particles become more easily dislodged, being moved or 'splashed' away. It has been well documented that increased tillage intensities can reduce soil organic matter in the topsoil due to increased microbial activity and carbon (C ) oxidation. The potential loss of soil organic matter due to tillage operations is much higher for high organic matter soils than low organic matter soils.
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What types of microorganisms cause decomposition & microorganisms to degrade organic contaminants & to bind use of metals in a less bioavailable?
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Microorganisms play a significant role in the removal of heavy metals pollutants. The heavy metals exert toxic effects on living cells. As degradative aerobic bacteria are Pseudomonas, Alcaligenes, Sphingomonas, Rhodococcus, and Mycobacterium. Bioremediation is therefore an eco-friendly and efficient method of reclaiming environments contaminated with heavy metals by making use of the inherent biological mechanisms of microorganisms and plants to eradicate hazardous contaminants. However, micro-organisms such as bacteria, fungi, and actinomycetes–even though they go unnoticed in your compost pile–are responsible for most of the organic material breakdown. They are chemical decomposers because they use chemicals in their bodies to break down organic matter. Bacteria, fungi and a few other microorganisms initiate the process of decomposition and are known as decomposers. They feed on dead organisms to survive. The decaying and dead animals and plants serve as the raw materials which, on the breakdown, produce nutrients, carbon dioxide, and water, etc. Fungi-based biodegradation is eco-sustainable and one of the latest alternatives; it can detoxify pollutants such as polycyclic aromatic hydrocarbons, plastics, toxic dyes, and other environmental contaminants.
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What are the management strategies to improve the soil organic dynamics as catalyst of crop resource capture in climate smart agriculture?
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Practices such as using cover crops, applying manure and compost, rotating crops, and controlling erosion for soil conservation, can maintain or increase soil organic matter. Other practices, especially plowing, tilling and cultivating, can decrease the amount of organic matter in the soil. In order to minimize crop damage created by pests and maintain soil health, farmers apply different protection measures: crop rotation, crop isolation, tillage, mixed farming, proper planting time, cover crop and barriers, mulching and green manure, chemical, and natural soil and plant. There are several ways of improving aggregate stability: Retain surface cover to slow down the rate of wetting and lessen raindrop impact. Minimize tillage and traffic that damages existing soil structure. Increase root and biological activity by maintaining healthy vegetation growth. Improving soil management through practices like cover cropping and optimizing grazing patterns can remove carbon dioxide from the atmosphere by increasing carbon uptake and reducing carbon losses from agricultural soils.Land uses and management that reduce carbon inputs or increase losses compared to natural vegetation result in reductions in SOC over time, creating a soil carbon deficit relative to the levels of carbon that previously existed in the soil. Rainfall and temperature have by far the strongest influence on soil organic matter levels. Soil organic matter content is usually higher where rainfall is higher and temperatures are cooler.
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Are there any organic or non-chemical methods for controlling pests and diseases in foxtail millet fields, and how effective are these methods? Are there any specific warning signs or symptoms that farmers should watch out for when inspecting their foxtail millet crops for pests and diseases?
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Millet crops in India are affected by a variety of pests, but shoot fly, stem borer, and grasshopper have been identified as the most major pests. Shoot fly mostly attacks barnyard millet, followed by proso millet and finger millet to a lesser extent. Army worm, cut worm and leaf scrapping beetle appear occasionally in serious form. In certain areas shootfly occur, although it is not a regular pest. Control: When pests are noticed, take up dusting of Endosulfan 4% @ 30kg/ha or Malathion 5% @ 8-10 kg/ha. Seed treatment with Imidacloprid @ 10-12 ml/kg of seed or Thiamethoxam 70 WS @ 3g/ kg of seed may be used. Apply Carbofuran (Furadan 3G) or Phorate 10G at the time of sowing as soil application in the furrows @ 20 kg/ha.
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Can drip system be used to supply liquid nutrients panchagavya as liquid fertilizer & organic farmers fertilize crops & control pests, diseases & weeds?
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These plants have to be ploughed in the field when they are tender and before they start flowering. Can drip system be used to supply liquid nutrients such as panchagavya as liquid fertilizer? Yes, a number of farmers have already been using the technique of using organic liquid fertilizers through drip system. Many growers using drip apply granular fertilizers in March or April and then switch to fertigation in May, once irrigation is required on a regular basis,” he said. “The use of granular fertilizer in the spring is less expensive than fertigation and practical for mature plants. When fertilizing daily, use a week solution. So when the label reads; dilution rate of 4 tablespoons of fertilizer to 1 gallon of water, you can use 1/2 T to 1 T per gallon of water. Daily feeding is generally not necessary unless you are a commercial grower or want quick results for hanging baskets and potted plants. Drip irrigation is the most efficient water and nutrient delivery system for growing crops. It delivers water and nutrients directly to the plant's roots zone, in the right amounts, at the right time, so each plant gets exactly what it needs, when it needs it, to grow optimally. Drip systems require special attention to fertilizing. Because the water flow is from each emitter downward and outward, fertilize that is not placed between the emitter and the plant roots may never reach the plant roots. The basic principle is to be sure fertilizer is placed within the wetted zone. Place 4 tablespoons processed poultry manure or blended dry organic fertilizer into a quart jar, and fill with lukewarm water. Screw on the lid and shake vigorously, then keep at room temperature for two days. Pour off the liquid and dilute with water to the strength desired. Place 4 tablespoons processed poultry manure or blended dry organic fertilizer into a quart jar, and fill with lukewarm water. Screw on the lid and shake vigorously, then keep at room temperature for two days. Pour off the liquid and dilute with water to the strength desired. In agricultural crops, crop rotation, selection of crop plant varieties, timing of planting and harvesting, irrigation management, crop rotation, and use of trap crops help reduce populations of weeds, microorganisms, insects, mites, and other pests. The principal methods of organic farming include crop rotation, green manure and compost, mechanical cultivation and biological pest control. Farmers are faced with myriad of production challenges where the most common problems are pests, which include insects, diseases, and weeds. Organic farmers therefore prefer the biological control of diseases and pests to the use of chemical pesticides. It's a non-polluting practise. It does not affect the relationship of natural predators and food chains. Biological control is self-regulation and does not require any kind of management.
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How to cassify soil stabilizers according to mechanism of stabilization?
Organic、inorganic、ionic、Enzyme?
Why is ionic not included in inorganic, enzyme not in organic???
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Please, give a definition of soil stabilizer.
As far as know, there are three ways of soil stabilization: biological, physical and chemical.
"Organic" can be food.
"USDA certified organic foods are grown and processed according to federal guidelines addressing, among many factors, soil quality, animal raising practices, pest and weed control, and use of additives. Organic producers rely on natural substances and physical, mechanical, or biologically based farming methods to the fullest extent possible."
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Does tillage increase or decrease organic matter (OM) & tillage reduce OM does adding organic fertilizer or OM in soil improve soil health & crop quality?
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Repetitive tillage degrades the soil structure and its potential to hold moisture, reduces the amount of organic matter in the soil, breaks up aggregates, and reduces the population of soil fauna such as earthworms that contribute to nutrient cycling and soil structure. It has been well documented that increased tillage intensities can reduce soil organic matter in the topsoil due to increased microbial activity and carbon (C) oxidation. The potential loss of soil organic matter due to tillage operations is much higher for high organic matter soils than low organic matter soils. Tillage disturbance changes the conditions of decomposition, causing the soil respiration rate to increase and the organic matter content to decrease. However, tillage has all along been contributing negatively to soil quality. Since tillage fractures the soil, it disrupts soil structure, accelerating surface runoff and soil erosion. Tillage also reduces crop residue, which help cushion the force of pounding raindrops.Reduced tillage reduction can enhance soil aggregation, promote biological activity, and increase water holding capacity and infiltration rates. This leads to greater available soil moisture, improved soil tilth, and increased organic matter content. The bulk density increased with time after tillage for all tillage treatments as the soil gradually get compacted under the influence of rainfall and particle resettlement. Tillage alters the physicochemical properties of soil by mixing the upper fertile profile with the lower profile rich in leachates and affecting the soil enzymes. It also influences the soil organic carbon and distribution of water and aeration in the soil profile. Deep tillage may improve crop resilience by affecting soil physical properties. Deep tillage led to lower bulk density and increased root growth. Crop water availability and crop yield were not affected by deep tillage.
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What is the difference between organic particles and mineral particles in soil and differences between a mineral soil and an organic soil?
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Organic particles of decayed plant and animal materials which come from living plant and animal bodies; Mineral particles such as sand, clay, stones or gravel which were once parts of larger rocks. Mineral soil has a carbon content of less than 17%. Croplands are rich in mineral soils because to grow crops, the soil should be rich in mineral nutrients. Organic soils are very rich in organic matter naturally. It contains more carbon in it (more than 17%). The most common organic matter found in organic soil is compost, manure, and mulch. Additives such as worm castings and bat guano enrich the soil. Non-organic soil mixes usually contain a combination of perlite a product that is made from heated volcanic glass, expanded clay aggregate, and peat moss. Organic soils can help your plants resist pests and disease, avoiding the need to use chemicals and pesticides. Because organic soil is composed of nutrient and mineral rich elements, your plants will grow stronger cell wells, giving them added layers of protection from pests and disease.
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Why reducing tillage minimize loss of organic matter (OM) & role of ZT in organic farming & soil tillage can have an impact on level of OM content?
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In fact It has been well documented that increased tillage intensities can reduce soil organic matter in the topsoil due to increased microbial activity and carbon (C) oxidation. The potential loss of soil organic matter due to tillage operations is much higher for high organic matter soils than low organic matter soils. Minimum tillage is a soil conservation system like strip-till with the goal of minimum soil manipulation necessary for a successful crop production. It is a tillage method that does not turn the soil over, in contrast to intensive tillage, which changes the soil structure using ploughs. Nevertheless, conventional tillage exerts many adverse effects, as it contributes to excessive compaction of soils, higher susceptibility of soils to erosion, and accelerated organic matter mineralization. Consequently, long-term conventional tillage may cause loss of soil productivity and fertility
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Which type of soil is composing of organic substances with varying amounts of decaying O.M., & decomposition takes place only in soil or in water air too?
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Humus is dark, organic material that forms in soil when plant and animal matter decays.Aerobic decomposition takes place in the presence of oxygen. This is most common to occur in nature. Living organisms that use oxygen to survive feed on the body. Anaerobic decomposition takes place in the absence of oxygen. Humus is the layer formed on soil due to the decomposition of dead plants and animals by microbes. Humus supplies nutrients to the soil.
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What is the role of microorganisms in the degradation of organic pollutants and role of microorganisms in formation of soil organic matter?
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Microorganisms are essential to soil formation and soil ecology because they control the flux of nutrients to plants promote nitrogen fixation, and promote soil detoxification of inorganic and naturally occurring organic pollutants. The living portion represents about 5 percent of the total soil organic matter. Micro-organisms, earthworms and insects help break down crop residues and manures by ingesting them and mixing them with the minerals in the soil, and in the process recycling energy and plant nutrients. Bioremediation is a process that uses mainly microorganisms, plants, or microbial or plant enzymes to detoxify contaminants in the soil and other environments. The microbial organisms transform the substance through metabolic or enzymatic processes. It is based on two processes: growth and cometabolism. In growth, an organic pollutant is used as sole source of carbon and energy. This process results in a complete degradation of organic pollutants. Various microorganisms can degrade environmental pollutants with promising skills like bacteria, fungi, algae, and protozoa. Certain parameters must be established to provide the highest biodegradation rate of degradable microorganisms under the optimum conditions. Microorganism used some substances in pesticides as nutrients and decompose them into small molecules, and the main ways of degradation were mineralization and co-metabolism.Microbial turnover forms the backbone of soil organic matter (SOM) formation and it has been recently proposed that SOM molecular complexity is a key driver of stability. Despite this, the links between microbial diversity, chemical complexity and biogeochemical nature of SOM remain missing. Organic matter decomposition serves two functions for the microorganisms, providing energy for growth and suppling carbon for the formation of new cells. Soil organic matter (SOM) is composed of the "living" (microorganisms), the "dead" (fresh residues), and the "very dead" (humus) fractions. They include algae, bacteria, cyanobacteria, fungi, yeasts, myxomycetes and actinomycetes that are able to decompose almost any existing natural material. Micro-organisms transform organic matter into plant nutrients that are assimilated by plants.
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What role can biogas plants play in the development of sustainable, emission-free organic agriculture as an important element in the green transformation of the economy and the decarbonisation of civilisation's economic processes and in counteracting the progressive process of global warming?
In order to slow down the progressive process of global warming, it is necessary to increase the efficiency and accelerate the implementation of the green transformation of the economy in order to create a sustainable, zero-emission, green circular economy as quickly as possible. In the process of efficiently implementing the green economy transition, there are several essential components, which include the green energy transition based on the development of renewable and zero-emission energy sources, the development of electro-mobility, the development of sustainable organic agriculture, sustainable energy-efficient construction, low-carbon mining and industry, etc. The development of agricultural cooperatives that run sustainable business ventures supporting farm management, the development of composting facilities, the improvement of the post-agricultural waste separation system and increasing recycling, the development of small-scale renewable and zero-emission energy power plants supplying energy to farms, and the development of biogas plants are important factors in the development of sustainable, zero-emission organic agriculture that also realises the objectives of sustainable development and the principles of a sharing economy and a closed loop economy. Biogas plants, including microbial energy plants that generate energy from biogas that can be produced from livestock manure, can play an important role in bringing about a green transformation of agriculture to create sustainable, emission-free, climate- and environment-friendly organic agriculture, including both sustainable, emission-free agriculture based on crop production and emission-free livestock farming. Biogas plants can be set up and built primarily by farmers' cooperatives and microbial gas plants can be built within individual farms. In this way, farms can be self-sufficient in energy. In addition, a positive pro-climate effect results from the combustion of methane, which is particularly strong in terms of generating the greenhouse effect, because even if the CO2 produced by combustion is not bound into certain rock materials and is released into the atmosphere, the greenhouse effect will be much weaker compared to methane. However, a much better pro-climate solution would be not to emit CO2 into the atmosphere, but to bind it to a specific rock form or to inject it deep into the earth's crust in rock layers that will absorb and chemically bind the gas. In view of the above, biogas plants can play an important role in the development of sustainable, emission-free organic agriculture. However, fully climate-friendly biogas plants will be those that do not generate other greenhouse gases when burning methane. Biogas plants can also produce bioethanol, the combustion of which can be a source of energy and has low emissions.
In view of the above, I would like to address the following question to the scientific and research community:
What role can biogas plants play in the development of sustainable, emission-free organic agriculture as an important element in the green transformation of the economy and the decarbonisation of civilisation's economic processes and in counteracting the progressive process of global warming?
What do you think about this topic?
What is your opinion on this subject?
Please respond,
I invite you all to discuss,
Thank you very much,
Best wishes,
Dariusz Prokopowicz
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Biogas can play several roles, such as-
★ Producing renewable energy : Biogas plants can produce renewable energy from organic waste, which can replace fossil fuels and reduce greenhouse gas emissions.
★ Providing a source of fertiliser: The residue from the anaerobic digestion process can be used as a nutrient-rich fertiliser, which can improve soil fertility and reduce the need for synthetic fertilisers.
★ Reducing greenhouse gas emissions : By capturing and using the methane produced during anaerobic digestion, biogas plants help to reduce the emissions of greenhouse gases into the atmosphere.
★ Improving sustainability in agriculture : The use of biogas can improve the sustainability of agriculture by providing a source of renewable energy and fertiliser, reducing the need for synthetic inputs, and improving soil health.
★ Fighting global warming: By reducing the amount of organic waste that is sent to landfills and by reducing greenhouse gas emissions, biogas plants can help to combat global warming and contribute to the decarbonisation of economic processes
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Some examples of organic and inorganic fertilizers?
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Organic fertilizer examples- include green manures, livestock manure, compost, household waste, crop residues, woodland litter, etc.; inorganic fertilizers include phosphate, lime, rock, potash, etc
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this is a link for HNMR and 13CNMR for organic compounds data analysis and also I attached the paper in the post...wish a good benefit for all researchers...regards.
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The article you uploaded is very helpful.
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1 What is the conversion rate of tertiary amines in amine methylation reactions? Such as methylated polyethyleneimine, methylated TEPA.
2 How to increase the degree of methylation/how to increase the conversion rate of tertiary amines?
3 What methods of characterization can be used to quantify the proportion of tertiary amines in the product?
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To quantify the conversion rate of tertiary amines in organic amine methylation reactions, you can use a variety of analytical techniques such as HPLC, GC, or NMR spectroscopy. Here's a overview of each method:
  • HPLC (High-Performance Liquid Chromatography) - This is a common method for monitoring the conversion of tertiary amines to their corresponding N-methylated products. HPLC separates the reaction components in a sample based on their chemical properties, such as their polarity or molecular weight, and can quantify the amount of starting material and product in the reaction mixture.
  • GC (Gas Chromatography) - GC is another method used to analyze reaction mixtures for organic amine methylation. It separates volatile compounds based on their boiling points and can identify and quantify the conversion of tertiary amines to their corresponding N-methylated products.
  • NMR (Nuclear Magnetic Resonance) Spectroscopy - This technique is also useful for monitoring amine methylation reactions. NMR can determine the relative quantities of starting materials and products based on signal intensities and chemical shift values.
Regardless of the method used, it is important to establish a calibration curve with known standards of the starting material and product to accurately quantify the conversion rate of tertiary amines in organic amine methylation reactions.
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Dear colleagues, I am planning to use glovebox for synthesis with air sensitive reagents, which include solid and liquid. Do you have tips/handbook/reference for long hour work? Thank you for your contribution and wisdom!
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1. Set up the reaction vessel with all the necessary reagents prior to introducing them into the glove box. 2. Utilize automated syringe pumps to accurately dose reagents, solvents and catalysts into the reaction vessel. 3. Use magnetic stirring bars to ensure efficient mixing and reaction of the reagents. 4. Utilize a heating mantle or hot plate to maintain reaction temperatures. 5. Use online monitoring equipment to track reaction progress. 6. Use inert gas purging to remove oxygen from the reaction vessel. 7. Utilize a quick-change system to switch between different reaction vessels when needed. 8. Utilize a glove box robot to transfer solvents, reagents and products between vessels. 9. Utilize a nitrogen blanket or inert gas sparging to keep the reaction environment anaerobic. 10. Use a glove box that is equipped with a vacuum port to facilitate efficient solvent removal.
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I'd like to reduce COD in waste that contain organic amine.
I've tried to add hydrogen peroxide (no catalyst addition) but, the final COD result was higher than the initial.
Maybe there's a solution to treat my waste and is there any incorrect step during my previous peroxide test?
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Irfan Farizky Nur Hapsara, I suggest hydrogen peroxide isn't the best treatment option to remove COD in your case:
  1. Hydrogen peroxide reacts quite slowly with most organic pollutants so it is likely your oxidation will not run to completion. You can verify by measuring residual hydrogen peroxide after your treatment.
  2. Hydrogen peroxide is not only an oxidant. It can reduce chromic acid in the COD analysis so any residual will increase the COD measured after treatment.
You could consider Fenton or perozone oxidation instead, but it might cheaper to use sorption in some cases as Lucas Hamidu suggest.
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Can an earthworm live in a soil full of harmful chemicals why and process when earthworms used to degrade organic waste?
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Earthworms are used to convert organic waste material into dark brown nutrient rich humus that is a good source of manure for plants. Worms can also degrade specific pollutants and might allow community formation of useful microorganisms. Worm composting is using worms to recycle food scraps and other organic material into a valuable soil amendment called vermicompost, or worm compost. Worms eat food scraps, which become compost as they pass through the worm's body. Compost exits the worm through it’s' tail end. The process of degradation of organic wastes into manure by the action of microorganisms is called composting. The manure thus obtained becomes natural fertilizer for the plants as well as increases the soil fertility. Vermicomposting is a unique process that occurs in earthworm's gut to convert organic wastes into organic fertilizer or vermicompost by using joint action of earthworms and microorganisms. The technical word for worm poop is castings, and the composting method is called vermiculture, or vermicomposting. Of the more than 9,000 species of earthworms, only seven have been identified as suitable for vermicomposting. However, in agricultural settings earthworms can also have harmful effects. For instance, their castings can increase erosion along irrigation ditches. In the urban setting, earthworm burrows can cause lumpy lawns. Earthworm tunnels bring in oxygen, drain water and create space for plant roots. Their natural feeding habits mean that small amounts of soil pass through their bodies and, surprisingly, when they excrete it, it is in better condition what goes in comes out much better
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How do earthworms help create organic material for healthy soil and do earthworms help farmers and importance of earthworms in the environment?
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Earthworms Are Very Important for Soil Ecosystems in a Good or Bad Way. Earthworms naturally occur in most terrestrial ecosystems around the globe. They constantly structure the soils that they live in. Their burrowing activities mix the soil and improve the flow of air and water through the underground world. Earthworms "plow" and mix up the soil. Their tunneling loosens the soil so water and nutrients can go downward. The nutrients in worm castings enrich the soil. The slime they secrete contains nitrogen, an important nutrient for plants. Earthworms make their way through the soil, by loosening the soil and allowing more air to get in. Earthworms improve the quality of the soil as it recycles the organic waste into humus. This makes the soil fertile and helps the crops to grow. The earthworms improve the fertility of soil in different ways and, therefore, they are of utmost importance in agriculture. Actually, the burrowing and soil feeding habits of earthworms make the soil porous which permit both aeration and quick absorption of water. Earthworms help to increase the amount of air and water that gets into the soil. They break down organic matter, like leaves and grass into things that plants can use. When they eat, they leave behind castings that are a very valuable type of fertilizer. Earthworms are like free farm help. Earthworm tunnels bring in oxygen, drain water and create space for plant roots. Their natural feeding habits mean that small amounts of soil pass through their bodies and, surprisingly, when they excrete it, it is in better condition what goes in comes out much better. Earthworms seem to enhance denitrification, most likely through the increase in organic compounds due to organic matter decomposition. By enhancing soil nutrient availability, earthworms indirectly promote plant growth, which has also been attributed to the induction of signal molecules.
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Respected experts/researchers/scientists,
Kindly suggest a solution for data compilation of growth and yield parameters of different crops in different cropping systems for statistical analysis.
Experimental details are as follows:
Main plot treatments = 4
Subplot treatments = 4
Design - Split plot design
Main plots: Cropping systems in crop component (4)
CS1: Paddy-paddy-pillipesara
CS2: Sweet corn-chickpea-sesamum
CS3: Foxtail millet- chickpea
CS4: Bt cotton-black gram
Subplots: Nutrient management through manures generated from the IFS unit (4)
N1: 25 % N through inorganic fertilizer + 75% N through organic manures
N2: 50 % N through inorganic fertilizer + 50% N through organic manures
N3: 75 % N through inorganic fertilizer + 25% N through organic manures
N4: 100% RDF through inorganic
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Thanks sir Paul Milham
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1 when actually applied to absorbing SO2 in flue gas, will organic amines that only contain tertiary amines really not interact with CO2? Like methylated polyethyleneimine and triethanolamine.
2How to avoid the adsorption of CO2 by amine functionalized adsorbents (only adsorbs SO2)?
3 Loading organic amines containing only tertiary amines to porous materials and applying them to flue gas capture after desulfurization and denitrification in power plants, can this composite adsorbent achieve highly selective capture of SO2?
4 If this organic amine is used to completely occupy the pore volume of the porous material, can it be recognized that the adsorbent will not physically adsorb CO2?
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Tertiary amines will react with CO2 if water is present, making a bicarbonate salt.
CO2 + NR3 + H2O = [R3NH][HCO3]
However, if water is absent and there are no other related chemicals present like an alcohol or primary/secondary amine (i.e. any N-H, S-H or O-H bond into which CO2 could insert itself), then a tertiary amine will mostly ignore CO2. I say "mostly" because there is a weak interaction between the tertiary amine lone pair and the carbon atom in CO2 that can be detected spectroscopically, but it's not such a strong interaction that you could isolate the amine:CO2 adduct as a product.
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Is organic livestock a viable major strategy in the meat and dairy sector or will it remain a niche?
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Given the growth in the world population I cant see this as a viable large scale production option. Some of the practices required by organic production can likely be adopted, but overall efficiency of production and health status of livestock is really difficult to maintain at a sufficient level to produce the food requirements of the planet in organic systems.
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What are mineral and organic constituents of soil and their role in maintaining soil productivity and role of soil organic matter in nutrient and organic carbon management?
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Organic matter contributes to nutrient retention and turnover, soil structure, moisture retention and availability, degradation of pollutants, and carbon sequestration. Mineral is the inorganic component of soil which includes soil particles. Organic matter is the organic component of soil which includes the residue of dead plants, animals and organisms. It consists of nutrients necessary for plant growth such as nitrogen, phosphorus, and potassium.
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How, much amount of available Nitrogen is added to soil after green manuring with Dhiancha (Sesbania sp.), where green manuring with dhiancha or organic cultivation has been practiced for 4 to 5 years?>
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Dhaincha is the best green manure crop because it contains 3.50% N, which is higher than any other green manure crop. With green manure use, the amount of nitrogen that is available to the succeeding crop is usually in the range of 40-60% of the total amount of nitrogen that is contained within the green manure crop.
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Farm researchers and others are attracted in every decade by a few distinguishing words (like sustainable agriculture, organic farming, smart farming, etc.). Please mention the trending word that is popular, according to you.
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Climate-smart agriculture; conservation agriculture; zero tillage; carbon-intensive farming; forest farming; net-zero carbon farming; deforestation-free farming; integrated agriculture; green agriculture;
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I'm inducing (Repeated exposure) lung inflammation by using organic dust; I want to know how we can determine whether the mice's lungs will inflammated or not.
What are the symptoms clinical examination can be seen in the mice?
Thanks in advance
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Have you done characterization of the organic dust? For VOC's, PAH'S or metals?
I expose C67/BL6 mice with PM 2.5 and the functional parameters of the mice lungs are affected from 15th day itself. So if you have instruments to assess the lung function such as whole body plethysmography or FlexiVent analysis, you could check the same at 15th day interval and from then on every 7 days interval to check how the inflammation and lung function are being affected due to repeated exposure of organic dust particles.
Thanks
Samir
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I have read some articles on this, but reagents to increase the floatability of microplastics are not commonly used. Is it feasible to use biodegradable organic reagents to separate microplastics from soils by flotation? What would be the drawbacks or disadvantages?
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Thanks Prem. Wonder at practicality of these intense protocols.
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What is the difference in design, application and sustainability between nano-systems of the free element or its oxide and between organic nano-systems.
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Dear Alaa Al-Khalaf
I highly recommend you read this article
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I have powdered diphenylcarbazide and I want to make 0.5% w/v solution of diphenyl carbazide. Since it is dissolved in acetone.
Does it mean 0.5 g in 100 mL acetone? Is there any need to add distilled water?
In literature it is prepared by dissolving in acetone and then 200 mL distilled water was added.
Thanks for your guidance
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It is likely the presence of water will help to stabilise the metal ions. In the presence of pure acetone the inorganic metal may be insoluble and unavailable to react?
As per above, taking the 0,5 gram and dissolving in pure acetone, then making this up to 100ml, maybe using 50mL acetone, and then using distilled water to complete the volume requirement?
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I am simulating organic Solar cells in the FDTD Lumerical software How to find out the refractive index 3D sample data (ITO, PEDOT: PSS, PH3T: PCBM, nc-ZnO, Al).
How can I check the material fitting and select the accurate material concerning material fitting?
How can I prove that my anti-symmetric and symmetric working batter then periodic
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Dear
- Available material refractive index (or permittivity) in the Lumieracal library is limited. If these are not included in the library, you must find the reference for each material data or measure these by ellipsometry.
- The method of "how to fit material data" can be found on the Ansys FDTD homepage. Please check it
- I cannot understand your question (what is the meaning of "working better")?
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Since TiCl4 is immiscible in water which is dissolved in organic solvent such as DCM, even the crude peptide also dissolved in DCM solvent. I need to separate the peptide from the organic mixture and remove TiCl4. Could any one suggest some organic work up?
Thanks in advance
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TiCl4 is often used as a Lewis acid catalyst in organic reactions. Removing it from the reaction mixture is important to avoid unwanted side reactions and improve the quality of the final product. Here are a few methods to remove TiCl4 from an organic reaction mixture containing a peptide product:
  1. Extractive workup: TiCl4 is soluble in polar organic solvents such as methanol or ethanol, but insoluble in non-polar solvents like dichloromethane (DCM). You can extract the TiCl4-containing organic layer into a separate container and then add an equal volume of methanol or ethanol. The polar solvent will dissolve the TiCl4, while the peptide will remain in the original organic layer. The two layers can then be separated, and the organic layer containing the peptide can be dried over anhydrous sodium sulfate to remove any residual moisture.
  2. Column chromatography: Another option is to purify the peptide by column chromatography. The reaction mixture can be loaded onto a silica gel column and eluted with a suitable solvent system (e.g., DCM/MeOH or DCM/EtOAc). The peptide should elute as a separate peak from the TiCl4. The final peptide-containing fraction can then be dried over anhydrous sodium sulfate.
  3. Basic workup: If the reaction mixture is acidic, you can neutralize it with a strong base (e.g., sodium hydroxide or sodium carbonate) to convert the TiCl4 into the insoluble Ti(OH)4. The mixture can then be filtered to remove the solid, and the filtrate can be dried over anhydrous sodium sulfate to remove any residual moisture.
It's important to keep in mind that the specific method you choose may depend on the solubility and reactivity of the peptide, as well as the conditions of the reaction mixture. In general, it's a good idea to consult the literature or consult with an expert to determine the best method for your specific situation.
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Greetings,
I wish to react TBD (Triazabicyclodecene) with a methylated polysaccharide. The method is inspired from another protocol, where the product is retrieved by precipitation.
My product however, cannot be precipitated. The reaction will most likely take place in DMF, and afterward I wish to separate excess TBD from the product.
I read TBD is soluble in water and organic solvents, which might complicate separation by liq/liq extraction. I suppose that adding dilute acid might shift TBD's preference toward water, but can not find much information about this.
Any ideas or methods from fellow chemists would be greatly appreciated.
Thank you in advance !
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Do you have to use liquid-liquid distillation? If not, first remove the DMF by vacuum distillation then a simple extraction with aq 2M HCl and a suitable organic solvent for your compound.......if it is not water soluble. In theory, after removing the DMF you can treat the residue with a suitable solvent that dissolves the TBD (perhaps hexane or toluene?) but not your compound...then filtration with the same solvent wash....
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I am trying to do a docking between a ssDNA aptamer with an organic molecule using Autodock4. I have reviewed papers where they add Gasteiger charges to the aptamer but they don't mention anything about the organic molecule.
In Autodock4, after adding Gasteiger charges also to the ligand I get an "error" that does not allow me to save the *.pdbqt file of the ligand.
Is it necessary to add payloads to this ligand in Autodock4? I did this same procedure in AutodockVina and I had no problems there.
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In Autodock4, the choice of atomic partial charges can have an impact on the accuracy and specificity of the docking predictions. The two commonly used sets of charges in Autodock are the Gasteiger and the Kollman charges.
The Gasteiger charges are based on a model of the molecule's electrostatic potential and are calculated by summing over the atomic electron densities in the molecule. These charges are relatively easy to calculate, and they have been shown to provide good results for a wide range of molecules.
The Kollman charges, on the other hand, are calculated using the AMBER force field and are based on the molecule's molecular orbital electron density. These charges are more physically accurate, as they take into account the molecule's chemical environment, but they can also be more difficult to calculate.
In general, the Kollman charges are considered to be more accurate, and they are often used for proteins and other large biological molecules. However, the Gasteiger charges can still provide reasonable results for smaller molecules like aptamers and their ligands, and they are often used as a starting point for Autodock calculations.
Ultimately, the choice of charges will depend on the specific requirements of your study and the accuracy that you need for your predictions. You may consider trying both sets of charges and comparing the results to determine which set provides the best predictions for your aptamer-ligand system.
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Hi, the question I raised here, is a part of the TEEB AgriFood framework project in Uttarakhand. The project started in later half of 2021, it has various components for assessment of capital stocks and their flow in transforming food systems. As a part of larger picture regarding the policy interventions review for organic farming and Agroforestry in Uttarakhand. The study encompasses assessment of human and social capital issues as well, however, its a wider known approach that these components are usually assessed by the various choice experiments and survey methods, but I am looking for some statistical model that can help in using the information obtained in developing the scenarios.
Thanks and Regards !
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Dear Suvigya Sharma
You can measure human capital efficiency (HCE) empirically. HCE is a component of Intellectual capital (IC).
The following paper and related papers to the IC will be helpful for you.
Good luck for your project.
Best regards
Dr. Muhammad Yousaf
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I am trying to optimise an organic molecule using Avogadro software, and when I draw the molecule according to the correct sterochemistry (some bonds coming towards the screen and some going away from the screen) whenever I optimise the molecule using one of the forcefields the stereo chemistry starts to change and therefore some bonds face the wrong plane, is there a way to optimise the molecule without changing its stereochemistry in avogadro software?
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Hi Wares,
This is very odd, and I have yet to experience such a problem. I guess that we are talking about point chirality where a carbon atom is a stereogenic center, and not axial or planar chirality? Could you share the molecule that you're talking about? Maybe that could give some insight into the issue.
Also, I would suggest you not to use molecular mechanics for the optimization (Avogadro offers only MM), but rather semiempirical methods or, even better, some DFT calculations. For semiempirical calculations, you could try ArgusLab software, it is free and fairly easy to use. It is getting a bit dated by now, but you'll get somewhat reasonable structures (for sure better than MM optimization). Also, MOPAC is a good software if you have some experience using it, but otherwise, I'd suggest using ArgusLab. However, DFT is the way to go if you need good structures. There are some free software packages (such as NWChem or GAMESS), and you could use Avogadro as a graphical interface.
Hope this helps.
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In Gaussian, I am trying to do the MO analysis of a compound which is two metal centered having same organic moieties on both the metal. But, I am getting the LUMO which is appearing on only one organic moiety. I am expecting the contribution of both the organic moieties in LUMO. How can I make it correct ?
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Thanks Kyle for reply.
The metal in the complex is Sn.
The functional is - B3LYP
Basis set for Sn - SDD, and for other atoms it's 6-31G(d,p).
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I prepared the samples for GCMS but I'm not sure about the organic phase in liquid-liquid extraction to check the Insecticide degradation with the help of bacteria. need suggestions.
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All organic solvents are less dense than water and they constitute the upper phase, except for halogenated solvents, like DCM (d= 1.33 g/mL) or chloroform (d= 1.49 g/mL). Thus, halogenated solvents constitute the lower phase of a biphasic (water/organic solvent) mixture
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Hi! I want to ask about the density calculation of a particle or particles. I have read in Allen books to calculate the density of particles by using dispersant and go to m/v with addition calculation. I dont want to use dispersant because unreachable and difficulties to purchase dispersant here. Let me know if anyone has the procedure. I want to calculate organic particle (powder from natural substance). It has certain mesh number of 140 mesh
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you can use bulk density instrument
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Greetings,
I`m currently working on Organic solar cells and we are looking for a very good encapsulation method.
I also would like to know the pro and con.
For the application of our organic solar cells they will placed in a very hard environment (over oxygenation, Low humidity, vacuum...)
Thank you very much for your help.
Tarek
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PMMA,PDMS material may be used as encapsulation layer.it is better Mechanical Reliability and flexibility.
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I have designed a Covalent organic framework. I wanted to optimise the structure and calculate binding energy towards different metals.
which basis sets and method do I have to use?
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In high temperature sulfuric acid peroxide mixture (SPM) cleaning process, H2SO4 reacts with H2O2 and forms H2SO5 i.e. called caro's acid. Caro's acid is very reactive at high temperature with volatile organic contaminations. But question is, how and why this acid react with contamination ?
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Caro acid is the peroxymonosulfuric acid and is one of the strongest oxidants known (E0 = +2.51 V). It's unstable and decomposes to the hydroxyl and HSO4(.) radicals due to a relatively weak O-O bond.
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Many Palladium complexes dispense Pd black or other mixed phase nanoparticles when catalyzing organic transformations, whereas some do not. Why is it so? What factors affect these nanoparticle formations?
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Hi,
nanoparticles tend to aggregate together due to attractive Van der Waals forces. To keep them dispersed, you must counter that attraction with a stronger force. One option is to have electrostatic repulsion, another option is to use a capping agent, i.e., something large which attaches to the particle surface and keeps the nanoparticles far away so that the short-range VdW forces stay weak. The important factors are the affinity between the capping agent, nanoparticles, and medium, the relative size of the capping agent and particles, interparticle forces, temperature, etc. You can see our publications on nanoparticle arrangement in polymer solutions - it stems from the same fundamental principle as your case.
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How do remove organic compounds from water and what type of adsorption mechanism is used in regenerative systems for organic compound removal?
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Organic compounds can be removed from water by adsorption, coagulation/flocculation, ion exchange and oxidation processes. Adsorption is the most commonly used process for organic compound removal from water and uses a variety of adsorbents such as activated carbon, alumina, silica gel and resins. In regenerative systems, the adsorption mechanism is usually based on the physical and chemical interactions between the adsorbent and the organic compounds. The adsorbent material can be regenerated by elution with a suitable solvent, such as methanol, to remove the organic compounds from the adsorbent.
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Natural farming phenomenon now a days is wide-spread in scientific community and also increasing areas in rural communities, organic farming also have a significant positive effect but both are different. What is yours view? All of you diagnotories are welcome for your thoughts and discussion with your valuable suggestions.
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There are certain obligatory rules to follow in order to call products "organic" (biologique). What is the "Natural" farming? Does "not natural" farming exist?
"Natural farming phenomenon now a days is wide-spread in scientific community." I like gardening and always thought that plants in my garden grow naturally.
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What's the best method for dewaxing vegetal fibers with organic solvent? maceration or reflux? And what is the appropriate duration for each method?
Thank you.
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Both maceration and reflux are common methods that can be used for dewaxing fibers with an organic solvent, and the appropriate duration for each method will depend on the specific circumstances.
Maceration involves soaking the fibers in an organic solvent for an extended period of time in order to dissolve the waxes. This method can be effective for dewaxing fibers, but it can also be time-consuming and may require frequent replacement of the solvent. The appropriate duration for maceration will depend on the specific characteristics of the fibers and the solvent being used, as well as the desired level of dewaxing.
Reflux involves heating the fibers and solvent together in a closed system, allowing the solvent to evaporate and then condense on the fibers, effectively washing the fibers. This method can be more efficient than maceration, as it allows for a more thorough extraction of the waxes in a shorter period of time. However, it may be more complex to set up and requires more equipment, such as a reflux condenser. The appropriate duration for reflux will also depend on the specific characteristics of the fibers and solvent being used, as well as the desired level of dewaxing.
Ultimately, the best method for dewaxing vegetal fibers with an organic solvent will depend on the specific circumstances and the desired end result. It may be necessary to experiment with different methods and durations in order to find the one that works best for your particular fibers.
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In order to calculate LUMO and HOMO levels for an organic substance, I need to determine the onset Potential (oxidation and reduction). How to do it with the attached picture?
Thanx in advance.
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Dear Mohammed (If I may),
Cyclic voltammetry cannot provide the energy of the LUMO and also not of the HOMO. The reason is the unclear zero energy. Electrochemistry is a relative method. We use different standards like the Normal Hydrogen Electrode, the Saturated Calomel Electrode, and in organic solvents we use Ferrocene as standard. But all of them are different and not of them represents something like a zero value for an energy.
The only thing you can do reliably is to measure the HOMO-LUMO gap. And also you can compare different potentials = energies for different compounds if you use the same standard and the same experimental conditions.
To your last question. You should repeat the experiment and make separate scans for a) the anodic and the b) cathodic part starting both at 0 V. Then c) you scan from 0 V to the anodic - return to the cathodic and then back to 0 V. Then d) you scan from 0 V to cathodic - return to the anodic part and then back to 0 V.
Comparison of scan a) with scan d) and of scan b) with scan c) will be very interesting.
And then you can draw these off-set potentials and say something about the HOMO-LUMO gap and about the relative position of the first reduction wave and the first oxidation wave relative to the applied standard potential.
You can compare these potentials with literature values for well-known redox couples like 2Cl-/Cl2 for the anodic part and Zn/Zn(II) for the cathodic part.
Hope this helps,
best wishes,
aXEL
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I am going to apply sludge and Biochar as a source of nutrients on my field. For this purpose, I have thought to quantify the amount on the basis of nitrogen content in the sample. In such condition, if I want to quantify nitrogen present in my Biochar and sludge, which method of nitrogen determination would be appropriate?
N.B.- As we know, in general when we go for determining available nitrogen content in soil sample, we prefer modified Kjeldahl method. But, practically this method gives us the information about presence of Ammonium-nitrogen and organic Nitrogen present in sample whereas nitrate-nitrogen remains unconcidered. If I want to find out whole nitrogen content present in sample to quantify the "Total N content" so that we can apply it on the field, which method should I follow...
Seeking your kind advice on this topic. Please enlighten me with your thoughts.
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Kjeldahl does not measure nitrate or nitrite.
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I have prepared a mercaptopropionic acid capped CdS-QDs in water and precipitated it by isopropanol. However, I could'nt redispersed it into water after removed the organic solvent. Dose it distable?
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Hello brother hope you are doing well
so you should try it in hot water maybe it will get dissolve.
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TOC Analysis using TOC Analyser estimates the total organic C from samples. How does this estimate differ from the C estimated using CHNS/O analyser?
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