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I need to undertake protein expression protein using Eukaryotic expression system. However, when I have been reading different manuscripts I have found N or C-terminal histidine tags. This is not clear for me . So, would you help me what does it mean?
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His-Tag sequence can be placed on the N- or C-terminal of a target protein by using vectors from various commercial molecular biology companies.
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Cutaneous myiasis diagnosis and treatment
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Do parasites kill their hosts?
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Archives of the journal “Parasite”, 8 years, about 400 PDFs from 2005 to 2012, are now online as open-access from http://www.parasite-journal.org.
I hope this might help some of you; all aspects of parasitology are concerned by this journal.
I have not seen many messages as this one in RG. I believe it is not in contradiction to Article 5 of the terms of RG, “Misuse of the Service” which states that “advertising for commercial products or services of all kinds” is not allowed. This is not commercial since all papers are open-access and freely available.
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Dear Dr. Justin
Thank you very much for your initiative that contributes to the development of the work of researchers and provide scientific information to them
Best regards
Amjed K. Resen
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I have come across a nematode previously unrepresented in my host sample and would like to kindly request some assistance in identifying it. The worms were recovered from the large intestine of a female Apodemus flavicollis. Photos of a male and female are enclosed with this question. The length of the female is approx. 1,16 mm, with the eggs measuring approx. 0,060x0,041 mm. The length of the male is approx. 1,11 mm (though I found smaller ones as well, less than a millimeter long), the length of the spicule is approx. 0,065 mm. As far as I can gather, these appear to be Rhabditis sp. However, as far as I'm aware, adults of these nematodes are free-living and would have no business being in the intestinal tract of a mouse. Unless, of course, I'm missing something. Any and all help would be greatly appreciated.
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Borislav, your research interests  are in partial conflict with your official reports. To finish research you need to collect mice again as alive animal and to collect soil fom the mice hole to detect dauer juveniles of rhabditids   - for sure they are numerous in soil and you may have enough  material for DNA sample. If you have some not-fixed frozen juvenules of this species you may confirm your identification via PCR analysis. No other way in your situation.     
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We are performing in the Laboratory the PCR of the gp60 gene of Cryptosporidium. In many cases it does not work and some colleagues have told me that in some genes like this which, have a microsatellite región with a variable number of trinucleotide repeats (TCA, TCG, or TCT) coding for the amino acid serine, the TaqDNA polymerase skate giving multiple products with different sizes. We use a nested PCR protocol with primary PCR primers AL3531 and AL3535 and secondary primers AL3532 and AL3534 Does anyone can help me solve this to obtain one band?
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I used the exact same primers for the gp60 and have not experienced any issues with by products. However, I used HotStar master mix. You might want to dilute your DNA straight after extraction. 
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If you can suggest a journal for a method that would be much appreciated.
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Hi!
Expose the snails (in a water container) to artificial photostimulation
for two hours and after examine them under a stereomicroscope for the
presence of larval trematodes.
Vitor
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How make Toxocara larava from embryonated eggs of adult worm?
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Dear Adel, for this purpose you must infect puppies (up to 6 months old) with infected larvae, you must wait for the adults among one month.
Your sincerely,
DR. ML Ciarmela
ARGENTINA
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microbiologists and malaria researchers
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I think  it is part of their immune response
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Parasite eggs from river otter, Lontra longicaudis
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The first egg does look like an ascarid egg.   Dioctophyma renale eggs are found in the urine, so if this sample was collected in a way that avoided urine contamination, D. renale eggs would be unlikely. Also, in my limited experience, D. renale eggs are a bit more pointed at the ends, unlike this oval egg.   The second egg may be a trematode or pseudophyllidian tapeworm egg.  You could concentrate the eggs out of the feces and place them in a thin layer of distilled water (so they are exposed to oxygen) and incubate them for a while and see what type of larvae develops inside (ciliated = trematode; 6 hooks = tapeworm).  Also, keep in mind that the otter is eating organisms that will have their own parasites, so if you are only finding one or two eggs of a particular type, they may be from a food item and are not actually parasitizing the otter.
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I am in a need of some literature on TUNEL method. Can anybody help me?
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Hi Achini,
Please find the following protocol for tissue staining. I am forwarding you both colorimetric and fluorometric staining protocol.
Best Luck.
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Though we are doing it from soln 1, soln 2, soln 3, centrifuge technique, and others normally used protocol.
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mini prep. Relatively short and tested.
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Biomphalaria glabrata is the intermediate host for the important human blood fluke, Schistosoma mansoni, present in parts of the Caribbean. Establishment of this species in suitable habitats in southern Florida could lead to a potential for establishment of this disease on the U.S. mainland, in areas where substandad human waste treatment and/or zoonotic connections might occur. I am just seeking to determine whether anyone is looking intentionally at this through ongoing targeted surveillance.
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Clive, Thank you for your reply. This 2012 IAMAT document on shistosomiasis risk throughout the world (http://www.iamat.org/pdf/World_Schistosomiasis_Risk_Chart.pdf) makes it appear as though there are still infections taking place in Puerto Rico (apparently they haven't updated the status for Puerto Rico in a while). Thanks for the information.
There is at least one established B. glabrata population in Mississippi as I noted in an earlier post. It was only recently reported at a regional invasive species meeting (GSARP) . People had concerns that this new snail introduction could eventually lead to shistosomiasis disease in the area, so your comments help to put that risk into perspective.
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I am doing research on the identification and differentiation of Ascaris lumbricoides and Ascaris suum.
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Respected Joanna: trichuriosis ande ascariosis are very common in Colombia. You are cordially invited to visit my country if you need to get these parasites. Fernanda Mo.
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do you know about the prevalence of Giardia in goats?
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We had one isolate from a goat in our phylogenetic genetic study (attached)
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Parasitic copepod identification tools or manual.
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Did you ask DAISUKE UYENO ("Daisuke Uyeno" <daisuke.uyeno@gmail.com>) ? "Penses à publier !
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Sometimes, when we thaw a relatively recent vial (~1 month old), many parasites are dead. We suspect something went wrong when the vial was made. Can the glycerol be too old? Do you use ice? how do you gradually cool vials to -80C?
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Trypanosome metabolism is completely inhibited by anaerobiosis in combination with glycerol, exactly the conditions that are prevalent in the mixtures proposed for the freezing of the bloodstream forms of the African trypanosomes. Therefore I recommend to use DMSO rather than glycerol as cryoprotecting agent. The reason for this is that in the case of bloodstream forms in the absence of oxygen glycerol, above a concentration of a few millimolar, completely blocks glycolysis, which is the only ATP generating pathway for these cells (see Fairlamb, Opperdoes and Borst, Nature 1977, 265:270-271, . When you thaw the cells after storage and the temperature is raised above zero degrees centigrade the cells want to speed up their metabolism but will starve from a lack of ATP. This explains the highly variable results of viability of the cells when one does not take care of the temperature before freezing and after thawing.
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The hatching mechanism of the egg of Fasciola hepatica
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My preliminary research will work on Fasciola gigantica, larval stage in experimental snails.
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Current estimates seems to link the origins of plant viruses affecting crops to the early years of agriculture
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Please see article published in current opinion in virology 2011, 1:322–331 "Common origins and host-dependent diversity of plant and animal viromes" by
Valerian V Dolja and Eugene V Koonin
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What is this parasitic isopod from a marine fish?
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This question has been asked more than 3 months ago.
My remarks:
(1) It is surprising that Raja Kulanthaivel, who asked the question, did not participate anymore in the conversation!
(2) I suspected it was Norileca indica (Cymothoidae) but I wanted a precise identification by a real isopod specialist. So I forwarded the photograph to Prof. Jean-Paul Trilles (Montpellier, France) who confirmed the identification. So, yes, it is Norileca indica. Congratulations to those who already identified it.
(3) Going back to the profile of Raja Kulanthaivel, I noticed that he was a co-author of a paper with Trilles – why did he not ask directly to him?
More generally:
(4) Certain isopods, and perhaps a few copepods, are probably the only parasites which can be reliably identified from photographs. This will generally not work with helminths, and serious specialists will demand to see the specimens.
(5) If you post a request for identification, include all details (name of host, localization in host body, geographic locality). This helps a lot.
(6) I don’t see any “ethical problems” with an identification request. Science should be shared, and participants to ResearchGate are here for sharing. Showing a photograph for identification could be a first step for further communication and perhaps collaboration and production of a paper, and this can be very simply discussed between scientists.
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I am working on aspartic proteases in Toxoplasma gondii and I wish to find the function of this protein in this parasite. I could get the recombinant protein produced from E. coli with GST fusion. It has high expression level, somehow it is insoluble, and it is not active when I am trying to do enzyme activity. Does anyone have some advice?
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The following paper has some practical methods for approaching your problem. (Li T, Yowell CA, Beyer BB, Hung SH, Westling J, Lam MT, Dunn BM and Dame JB. 2004. Recombinant expression and enzymatic subsite characterization of plasmepsin 4 from the four Plasmodium species infecting man. Mol Biochem Parasitol 135, 101-109.) Not all aspartic proteases are as cooperative as plasmepsins 2, HAP and 4, depending upon the length of the prodomain and the various extra domains some of these proteases have, but methods in this paper should give you a place to start. You may also consider expressing your protein in another recombinant system that may fold the enzyme properly.
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And how can I make a titration of a known infective dose?
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Dear Mosaab,
I am working with Toxoplasma gondii as well, but I started from the parasite which was established for in vitro culture already. Here we used Vero cell with Minimum eagle medium MEM (8% FBS and 1 % Penicillin streptomycin) or HFF cell in DMEM (10% FBS, 1% Penicillin). We inoculated tachyzoites to the cell as day 0 then day 4 we harvested parasite (tachyzoites) using #27 needle, filtered through 5 micrometer filter, Centrifuge 5000rpm for 10 min 4 C, wash pellet of parasite once, and resuspend with 1 ml medium, then counting tachyzoites number using Neuber Chamber (Hemocytometer). Then you can calculate and get precise number of parasites before expermental inoculation.
By the way, one of the student here she is studying about Toxo related to abortion in mice, she said that abortion cause by host immune itself ( Interferon gamma If I am not wrong). Please search for article of Prof. Nishikawa Yoshifumi you might get some more and clear info for abortion. Hope this might useful for you.
Good luck.
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I need a little Taenia solium DNA for PCR as a control. I am looking for a fragment of strobila, segment or cysticercus of this tapeworm from which I could isolate the DNA (or isolated DNA). If anyone has some, can you please reply?
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Hi Good mornig, I can help to you, please contac my mail
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I would like to know your opinions about the in vivo imaging system to study the effect of drugs on animal models of cutaneous Leishmanasis and Chagas disease.
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There are several nice papers on the subject. For leishmananiasis experimental model, please look at Steve Beverley's publications using luciferase-expressing parasites. For Chagas disease model, refer to David Engman's and Rick Tarleton's papers.
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I have the possibility to purchase an automated cell counter to facilitate the counting of parasites such as Trypanosoma and Leishmania. Can anyone who has used this approach suggest recommendations?
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Hello Yael,
I worked for many years with T.cruzi and more recently with Leishmania. If you are thinking of using the counter to count T. cruzi in blood, I would advise you to try to get more information from Alain Fairlamb and Mohamed Bessat who also answered your question.
In my experience automated counters can be useful when you have a suspension of parasites whether from liquid culture ( T. cruzi epimastigotes or trypomastigotes or even transformed amastigotes or Leishmania promastigotes-possibly also metacyclics) . It could also work for intracellular amastigotes after lysis of host cells, if (and that is a problem) you have removed the majority of other contaminating cells and debris from the suspension.
For counting T.cruzi trypomastigotes in blood where the frequency of parasites to blood cells is very low even in heavy parasitemias, the counting machines could not distinguish the parasites from cells of similar size and shape or debris However, better machines may have appeared in the last 10 years).
There are ways to get rid of RBCs and platelets. For instance, red cells can be lysed with hypotonic solution and Ca: the debris, aggregated platelets and WBC are allowed to sediment at 1 g for 20 min at RT. The living trypos will swim to the surface and can be sampled. This and other methods have been published around 1970-80, but in the end they turned out to be more cumbersome and time consuming than traditionally counting of parasites in a fresh blood smear.
Ises A. Abrahamsohn
University of São Paulo, Brazil.
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Fresh specimen can be easily processed for SEM, but not samples which have been fixed either in alcohol or carnoys fixative
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thanks Souza Lima
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Does anyone know of any good journals regarding the binding of lectins - Sand Fly larvae - Leishmania ?
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Sorry, I have madea typing error, it is not a book but a paper;
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Can dogs be paratenic hosts?
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My opinion is that the dogs carry out the functions of the obligatory second intermediate and definitive hosts of Alaria alata (Sudarikov, 1960 (in Russian). The dogs as paratenic hosts aren't mention in literature. In general the trematodes of genus Alaria have may be the most complicated life cycles from trematodes. The review of Alaria is: Moehl K, Grobe K, Hamedy A, Wuste T, Kabelitz P, Lucker E (2009)
Biology of Alaria alata and human exposition risk to Alaria
mesocercariae–a review. Parasitol Res 105(1):1–15.
The review in Russian: Судариков В.Е. Подотряд Strigeata La Rue, 1926 // Трематоды животных и человека. – М.: Изд-во АН СССР, 1960. – Т. 18. – С. 453–694.
My article with note about life cycle of Alaria alata (in Russian): Дугаров Ж.Н., Мунхбаатар М., Балданова Д.Р., Щепина Н.А. Мезоцеркарии Alaria alata (Goeze, 1782) от монгольской жабы Bufo raddei Strauch, 1876 // Российский паразитологический журнал. 2012. № 1. С. 29-34.
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I want to extract DNA from the Schistosomas but have been unable to successfully extract them, could anybody suggest some methods?
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The best approach as indicated by James is to collect eggs, hatch miracidia and place on FTA cards for future DNA extraction. If you really do need adult worms they can be recovered by dissection or perfusion. The actual site will depend on the species under investigation.
David
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I'd like to extract giardia DNA from stool for PCR reaction. I don't know if there are protocols for extraction from stool, or how it differs from extraction from blood.
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Dear Nora,
You can try this commercial kit QIAamp DNA Stool Mini Kit (Qiagen), stool has alot of PCR inhibitors but this kit has served us well.
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Currently I am working on a drug sensitivity test on P. falciparum. In the mean time I just wanted to preserve the parasites in a deep freeze.
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Simon correa MRC unit The Gambia
Choose cultures of approximately 5% parasitaemia with a high proportion of high ring forms
centrifuge culture @2000rpm for 5 minutes.remove the supernatant
ADD EQUAL VOLUME OF DEEP FREEZE solution
28%glycerol,3%sorbitol,0.65%Nacl
Solution made by adding 28ml glycerol to 72ml of4.2%sorbitol or mannitol in0.9%Nacl.Sterilise by filtration.
Add this solution slowly to packed blood cells,drop by drop,at room temperature to allow glycerol to penetrate cells
Place no more than 0.5ml into each ampoule.
freeze rapidly by plunging into liquid nitrogen or -70c deep freeze.
Thanks
Good luck
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I know that some Rickettsial diseases have the H. hydrochaeris like natural host, but I did not saw articles especific on that.
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Please look for these two articles, I think it can help you:
1. Experimental infection of capybaras Hydrochoerus hydrochaeris by Rickettsia rickettsii and evaluation of the transmission of the infection to ticks Amblyomma cajennense.
Souza CE, Moraes-Filho J, Ogrzewalska M, Uchoa FC, Horta MC, Souza SS, Borba RC, Labruna MB.
Vet Parasitol. 2009 Apr 6;161(1-2):116-21. Epub 2008 Dec 13.
2. MIRANDA, J. ; CONTRERAS, V. ; NEGRETE, Y. ; LABRUNA, M. B. ; MATTAR, S. . Vigilancia de la infección por Rickettsia sp. en capibaras (Hydrochoerus hydrochaeris) un modelo potencial de alerta epidemiológica en zonas endémicas. Biomédica (Bogotá), v. 31, p. 216-221, 2011.
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I need to know about scientific trusted links for veterinary parasite photos
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The Centers for Disease Control and Prevention has a site called DPDx which has an extensive image library of parasites that cause disease in humans and animals. http://www.dpd.cdc.gov/dpdx/HTML/Image_Library.htm
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Does anyone have any general info on Cystic Echinococcosis and it's relationship with it's host and it's host's immune system?
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I think if you read these papers, you will have an idea about the relation between host and parasite
I send you the abstracts in attachment file
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I work with T. cruzi, CL, Y and Silvio X10/6 strains, and usually I freeze my cells using LIT medium with 10% DMSO or LIT medium with 15% glicerol.
I harvest the parasites by centrifugation and I resuspend the parasites on the freezing medium, after that I put in dry ice and take the parasites to the -70 freezer.
But sometimes when I thaw the parasites, they have a fragmented appearance and do not recover or take a long time to recover.
Thanks
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RPMI media + 10 % FBS + 5% DMSO should work well for cryopreservation. But after adding all, place it at -80 degree C for overnight and then shift to -196 degree celcius. Best wishes.!
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They are suppose to be resistant as cattle are. But some says cysts are rarely found in buffalo meat.. Any contributions? Even better, articles?
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@Nishi: coccidians but not T. gondii, though thank you very much.
@ Ahmed: I had managed to found them previously. If you come by others, do let me know. Thank you very much!
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&^%^%%)(_)
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You can find integrins in Trypanosoma brucei. check these articles:
Hall et al., 2005. Trypanosoma brucei: TbRAB4 regulates membrane recycling and expression of surface proteins in procyclic forms. Experimental Parasitology 111 :160–171
Garbanet et al. 2011. Rab11 Function in Trypanosoma brucei: Identification of Conserved and Novel Interaction Partners. Eukaryotic Cell August vol. 10 no. 8 1082-1094
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How to make permanent mount of cysticercus bovis?
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navanit shah is pleased to inform that when I use Canada Balsam for permannt mounts, it dries quicly and shows hardly any shrinkage. The slides are weel dry in a months time. All the best
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I want characterize the E.granulosus strains. I want know how to collect and preserve the parasite material from faeces of dogs. Would anyone please tell me or give the protocol how to do this procedure? Thanks.
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INTESTINE SCRAPPING TECHNIQUE
if this is from dogs do carefuuly by srapping the intestinal mucosaIntestinal scraping technique (IST; 12, 17)
i) Deep mucosal scrapings are taken at nearly equal distances from the small intestine using microscope
slides (75 × 25 × 1 mm). Five mucosal scrapings from proximal, middle and posterior thirds of the small
intestine (total 15) are recommended. Adherent materials are transferred to a square plastic Petri dish.
ii) Scrapings are squashed between slides and examined under a stereoscopic light microscope (×120).
Three slides are placed in one plastic dish and examined. Echinococcus multilocularis is usually found
in the second half of the small intestine.
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Haemonchus contortus is a Trichostrongyle parasite that reside in the abomasum. It feeds on blood and produce sever anaemia. in sheep and goats.
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Please clear the worms in lactophenol or grycerol solutions as per procedures and take photographs as required.
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Everyone who has detail knowledge about trypanosome morphology and its impact on vaccine development, pleas send your assumptions me with my email.
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The African trypanosome is a protozoan that, once it enters the blood of human beings and cattle, causes a fatal neurologic disease called trypanosomiasis, or "sleeping sickness" in humans. The key to the trypanosome’s success lies in its ability to evade the host’s immune system via antigenic variation. A mammalian host defends itself against the foreign protozoa by manufacturing specific IgM and IgG antibodies against their variable surface glycoprotein coat (VSG).
The host’s antibodies facilitate the neutralization and killing of approximately 99% of the original protozoan population. However, during this time a few of the trypanosomes have shed their coat, switched VSGs, and covered themselves with a new antigenically distinct VSG coat. These distinct protozoa give rise to a new population expressing the new VSG coats. The immune system again responds to this proliferated population by producing a new set of antibodies that succesfully kill 99% of the trypanosome population. But once again, VSG switching among a small portion of trypanosomes renders them undetectable, and they succesfully evade the host immune response. This cycle continues indefinitely, eventually causing the demise of the host.
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Role of anaemia in babesiosis.
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First of all I think that anemia only occurred in acute infection, in majority of cases where animals are under continuous pressure (endemic geographical foci) of the pathogen; both the host and the pathogen reach the equilibrium status, ergo the disease is remain usually sub-clinical. However, immunosuppressant might play a rule in the reemergence of Babesia merozoites replications activity, mainly due to other etiological agents. In Biochemical terms destruction of the RBCs will results in high concentration of haemoglobulin and though lower amount of oxygen supplies and eventually it will affect the cellular respiratory chain for energy production; ‘’Aerobic respiration requires oxygen in order to generate energy (ATP). Although carbohydrates, fats, and proteins can all be processed and consumed as reactant, it is the preferred method of pyruvate breakdown in glycolysis and requires that pyruvate enter the mitochondrion in order to be fully oxidized by the Krebs cycle The product of this process is energy in the form of ATP (Adenosine triphosphate), by substrate-level phosphorylation, NADH and FADH2’’. I should say that your question was so general, but if you are also interested in the immunological pathway as a response for the disease it’s another fact and must be discussed separately and in more exact terms.
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Hi Ginoi!
Have a look at this Homepage: http://www.ncbi.nlm.nih.gov/pubmed/
There you can search a ot of literature about Giardia in animals and in human beings.
Cheers,
Lukas
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Dear Members,
Currently I'am working on molecular epidemiology of Cryptococcus gattii, an important human pathogen. this yeast causes life-threatening infection of the pulmonary and central nervous systems in hosts with normal immunity and traditionally has been considered to be restricted geographically to tropical and subtropical climates.
To date, for reasons that are not yet fully understood, C. gattii has acquired the ability to adapt to new climatic and geographic conditions, such as those existing in Canada, where this yeast has unexpectedly emerged as a primary pathogen causing, since 1999, infections mostly in immunocompetent individuals. Moreover, during the past years, several clinical autochthonous cases have also been described of patients who live in Mediterranean countries showing that this fungus is more widespread than was previously thought. However no environmental studies have been conducted to evaluate the diffusion of this yeast in these geographical areas.
To this day, after twenty years of investigations our laboratory isolated this fungus in Reggio Calabria, southern Italy (from Eucalyptus camaldulensis trees) that emphasize the observed global expansion of this pathogenic yeast.
I therefore invite all those who live in the Mediterranean area to start a collaboration with my laboratory to perform an important environmental study about the spread of this yeast.
I believe that this effort to determine the ecology and population dynamics of C. gattii in Europe might detect a different reality than that currently known regarding the epidemiology of this species.
You can simply participate in the study by sending me the environmental samples (Eucalyptus camaldulensis debris, including leaves and barks) from your country or if you are able you can recover this yeast from these samples in your lab by using conventional phenotypic methods and than share the results.
I hope many of you will participate in this study.
Anyone interested can contact me at oromeo@unime.it for further details.
I think it will be a wonderful (and productive) experience working with you.
Best Regards
Orazio Romeo
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The ResearchGate project on environmental diffusion of Cryptococcus gattii in the Mediterranean area was started by our laboratory. Currently, we are examining environmental samples from Turkey send us by Dr. Emre Gençay.
We're still looking for samples from France, Portugal, Morrocco and Tunisia. Anyone interested can start sending samples to my laboratory.
If you have any questions, please do not hesitate to contact me.
Regards
Orazio Romeo
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i am doing research on yeast killer toxin,it is thought that the secretion of killer toxin from yeast are protein or glycoprotien in nature.i wana check its receptor or we can say mode of action for this perpose i have to dissolve poly sacchrides like chitin etc. i don't know how to dissolve chitin becasue it is not soluble in aquose organis solutions. i know that it is slouble in acid like HCl and alkali NaoH but is very much worried about that it is make the sloution of chitin with acid or base it may be harmful for my killer toxin i.e protein. please any body here to help in the solution of this problem
thanks
Aslam buzdar
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hi aslam..
from my experience ,,i can suggest chitin it dissolve in 20% OR 0.2M EDTA. most work which i have don with EDTA . thats a standard procedure is there,, how prepare the EDTA,, you just follow.. Micheal dubosis methid...
all the best
regards
sivasakthivel
bangalore university
india