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Estuarine Hydrodynamics - Science topic

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When I ran the HD Simulation on Mike Zero, I got an abnormal completion error stating that "CheckLicense: Node Limitations exceeded." Has anyone faced this problem in the past? How can I solve the problem, please?
Thanks
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It was a mesh problem. Thanks for your input.
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I am interested in hydrodynamic modelling, more specifically, I want to model riverine and coastal processes (i.e., discharge and surge/tide) to assess compound flooding effects in estuarine environments. I am relatively new to MIKE. Can MIKE handle this? If so, can anyone suggest related literature?
Thanks in advance
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Mike21 is a good choice for your interest, we used it in the simulation of Tide and tidal currents estuarine environment.
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Hello.
I'm performing a length-weight relationship in two populations of caridean shrimps (they are from two distinct seasonal periods), the pooled data was divided into males, females, non-ovigerous females and ovigerous females. I performed the equation and obtained the b slopes of each sub-sample analyzed, but now I want to compare those slopes to know if there is any different between them. I read that I could do an ANCOVA to compare, but I'm not sure if there is another methodology. Thank you.
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You could indeed use ANCOVA/linear regression (after checking your model assumptions, i.e. linear relationship between length and weight (in model 1), normality and homoscedasticity of residuals and independence of observations).
As observations from the same population are probably not independent, you should add population as a variable in your model.
There are two possibilities:
Model 1: model the relationship between length and weight, including an interaction with sex.
Since you are interested in the difference of length-weight slopes between sexes, you should add an interaction effect in your model.
The model looks something like this:
length ~ weight + sex + population + weight*sex
If the interaction effect is significant, the length/weight slope differs with sex. To identify the which of the four groups differ significantly from each other, you can carry out a post-hoc test on the interaction term (e.g. Tukey test). If the interaction is not significant, you cannot assume that the l/w ratio is significantly different between any of the four groups.
Model 2: use length/weight ratio as a response variable
Another way would be to use the length/weight relationship directly in a model:
length/weight ~ Sex + Population
Here, we do not need an interaction term, as the relation between the l/w ratio and the four ‘Sex’-groups is implicitly part of the model. If ‘sex’ is significant, you can again perform a post-hoc test on ‘sex’.
If you are using R, this link might be helpful: https://rcompanion.org/handbook/G_09.html
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I am studying the practice of borrow pit excavation and measuring the sediment budget using unmanned aerial systems and structure-from-motion software. Borrow pits are human-made channels excavated from saltmarsh used as material for dyke topping. Borrow pits are typically excavated parallel to the dyke.
I am seeing that some of the borrow pit channels are showing ebb dominance, and are not infilling as intended despite very high suspended sediment concentrations (5 - 50+ g/l). I am stumped as to why some of these channels are ebb dominated while others show flood dominance (and perform/infill better) despite a similar position in the estuary. This may be too specific of a question to ask, but what factors (e.g. design, proximity to main flood and ebb channels) could potentially impact this? I want to ensure that if borrow pit excavation is to continue as a practice, it is done so in a way that minimizes the long-term impact on the saltmarsh - particularly by infilling as quickly as possible.
For context this is a hypertidal estuary.
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One added point, installing dikes, diversions or filter silt fencing can after flow pathways. Under normal conditions, undesturbed salt marsh should hold up to small to moderate changes in flow stress. But monitoring is advisable until there is assurance of recovery, especially after major storms, winds that might alter forces.
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Can anybody explain possible effects of estuarine mixing on  benthic distribution, especially salinity and feeding behavior?
Which zone would be the benefit of high diversity?
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Dear Jayachandran,
you mean all living beings? reaction is too different. But working at the lab of the Danube and Limans (Estuaries) we found several interesting facts. Even desalinated the Estuary never lose completely its marutime or brackish water fauna. Look, please, my last presented publication about the Sassyk ciliates fauna! As well  what happened with this ineresting freshened basin after desalination are gathered in our book (as well my site). If estuary is of some large river and practically fresh, so marine fauna can penitrate over the deep relict river bad and it can be the very upper part of this type Estuary. Moreover  in this relic river bad is concentrated hydrogen sulphide that is suitable for anaerobic organismes od marine origin. I wrote about the Dnieper-Bug Estuary. As about tides it can stimulate exchange of the organismes but is not comfortable for a stable fauna. Therefore in the locality of the Estuary with abruptly changing regime it will be enough poor fauna, eg especially if salinity will be changing from 1-2 over 5-7 promille diapazone and back.
Extra interesting can be redistribution of the primary production of phytoplancton that can be consumpted in the deeper layers and in benthos...
I have enough much books on the question, so if necessary, call me by RG mailing, Will send.
Andrey
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Is the Moynapara tidal creek (as Das, Gautam K, has mentioned in the article called "Holocene tidal flat sedimentation in the Sunderban Biosphere Reserve, NE India" published in Coastal Zone Management journal, spl. publication, vol.2 in 2000) same as the Kalnagini Khal (as mentioned in the topographical sheet published in 1972 by SOI)?
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Try MNDWI water index with Landsat 5-8 / SPOT 5 imagery. 
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I work on a numerical model for investigating the structure of density and salinity in tidal estuarine system. I calculate d Richardson number using of formula. But amount of RI number are very variable, for example  0 to 5000. Are these amount of RI number correct? And what is its range?
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Hi, you might also find the following reference of interest:
Valle-Levinson, A. 2012. Impact of record flooding of a subtropical river on estuary/ocean exchange. Ocean Dynamics 62: 77-85.
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The estuarine area is under a macrotidal regime.
Surface samples, the uppermost 1cm, were collected, during low tide.
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Really thank you for the answer, I ll get a look. However I do not have isotopes. 
All the best
Fabio
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I work on a numerical model for investigating the structure of density and salinity in tidal estuarine system..How much is the Richardson number range in a estuarine system?
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Dear Heron
It is very difficult to provide a range. It all depends on many factors such as salinity, depth, height of tides etc... as you know about them. A very broad figure may vary from 0.01 to 10. The attached paper may help you in many ways. 
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Does anyone know a conservative tracer that can be used to differentiate the relative contribution of water from different tributaries in the upper reaches of an estuary (Salinity≈0), such as the Pearl River Estuary which is consisted of 3 tributaries?
What parameters I have so far are listed below:
Temperature,Salinity,DIC,TA,DO,pH,d13C-DIC,DIN,DIP,Ca2+,TSM,POC
In my case, the Ca2+ and TA could not be effective tracers. 
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We have often used conductivity as a conservative. For example, suppose we have only one streamflow measurement below the confluence with a tributary, and also have measurement of conductivity above and below the confluence and in the tributary. Then, using a simple mixing equation and assuming conductivity acts as a conservative, you can calculate the flows in the upper stream and in the tributary. We also use conductivity balances to assure that our flow measurements are correct. 
This works because total dissolved solids (TDS) which is a good conservative tracer is usually proportional to conductivity. In our day-to-day work we seldom actually estimate TDS, and simply use conductivity as if it was a concentration of a conservative material. 
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Thank you for the answers. Based on your suggestions I searched some articles. The link below seems to be useful for better understanding.
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Im wondering how to consider when to use a structured grid or an unstructured grid when conducting a coastal current simulation or probably even and other simulation as well. Im aware that some study suggest structured grid have higher accuracy but im wondering does the result would be affected if structured/unstructured grid is used on shallow coastal(<20 meter depth) in an enclosed bay especially.
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As the prior answers suggest, it's a compromise.  Structured grids are simpler to code, so if a significant constraint is programming time, this is the way to go.  Unstructured grids allow you to place the resolution where you need it (more easily), so if computing time is the main limit, this is the way to go.
In deciding whether you're more limited by programming time or computing time, don't underestimate the programming time.  It's awfully easy to do so.  Programming time includes not just the initial getting to the point of having meaningful answers in this particular model, but in developing all the programs and scripts for the care and feeding of the model (e.g. translating forcing fields to the model's grid -- easier with structured grids), and in maintaining all of your system's codes (again, can be more complex with unstructured grids).  The maintenance, care, and feeding of a model system is about 10x the programming time of the core model in my experience.