Science topic

Dermatoglyphics - Science topic

Dermatoglyphics are the study of the patterns of ridges of the skin of the fingers, palms, toes, and soles.
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Does metabolic footprinting focus on extracellular metabolites, and metabolic fingerprinting focuses on intracellular metabolites? I have a confusion between these two terms.what is key difference between metabolic footprinting and metabolic fingerprinting?
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Metabolic footprinting analyzes extracellular metabolites secreted or consumed by cells, reflecting their interaction with the environment. Metabolic fingerprinting profiles intracellular metabolites to capture the internal metabolic state of cells or tissues.
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How long will vanadate based nanophosphor is stable under prolonged exposure to UV light for latent fingerprinting?
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Dear Prof. Malik,
Could you please specify which kinf of vanadate nanophosphor do you refer to? YVO4:Eu?
All the best,
Thomas
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The intersection of biometric screening and artificial intelligence (AI) is a rapidly evolving field, with significant potential for innovation and improvement. Biometric screening involves the use of physical or behavioral characteristics, such as fingerprints, facial recognition, or voice recognition, to identify individuals. AI, including machine learning (ML) and deep learning (DL), can enhance biometric screening by:
1. *Improving accuracy*: AI can analyze large datasets to improve the accuracy of biometric matching, reducing false positives and false negatives.
2. *Enhancing security*: AI-powered biometric screening can detect and prevent spoofing attacks, such as using fake fingerprints or faces.
3. *Increasing efficiency*: AI can automate the biometric screening process, reducing the need for human intervention and increasing throughput.
4. *Enabling multimodal biometrics*: AI can combine multiple biometric modalities, such as face and voice recognition, to create more robust and secure identification systems.
Machine learning and deep learning are key technologies driving the advancement of biometric screening. ML can be used to develop algorithms that learn from data and improve over time, while DL can be used to analyze complex patterns in biometric data. Some examples of AI-powered biometric screening include:
- *Facial recognition*: DL-based facial recognition systems can accurately identify individuals in real-time.
- *Voice recognition*: ML-based voice recognition systems can authenticate individuals based on their unique voice patterns.
- *Fingerprint recognition*: AI-powered fingerprint recognition systems can improve the accuracy and speed of fingerprint matching.
Overall, the intersection of biometric screening and AI has the potential to revolutionize the way we authenticate and identify individuals, with significant implications for security, convenience, and privacy.
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The term ‘biometrics’ refers to the distinctive physical or behaviouralcharacteristics of an individual that can be exploited for the purpose of electronicidentification and authentication. Among the many types of biometric identifiers,some examples are fingerprints, face traits, speech patterns, and handwritingspeed. Each one of these identities can be used independently as a uniqueidentifier for a certain individual, and they can also be used in conjunction withone another to increase the reliability of identification. Today, biometrics arefinding an increasing number of applications across a wide range of industries.The utilisation of artificial intelligence (AI) in the field of biometrics israpidly developing, with the objective of enhancing the dependability, efficiency,and safety of biometric identification systems. (PDF) AI Based Advancements in Biometrics and its Applications. Available from: https://www.researchgate.net/publication/383551254_AI_Based_Advancements_in_Biometrics_and_its_Applications [accessed Jan 09 2025].
Regards,
Shafagat
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I found that fingerprint analysis of oligonucleotide fragments was used in molecular biology in some top-tier journals in the 1970s, but it seems difficult to find such experimental methods in current journals. Why is that? Does this experimental approach have any defects? What methods can be used to replace it now?
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There are some challenging issues.
Need prompt expert in this field to reveal results, as there may be errors in indicating false results.
Contamination will collapse total protocol.
Environmental factors may change the originality of results
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Every crystalline material exhibits its unique characteristics shape/pattern for identification just like a "fingerprint" for human identification. Why some peaks in XRD have higher intensity than others?
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You know that in crystalline solids we get sharp narrow peaks due to the periodic arrangement of atoms. X-rays diffract only in certain directions. so, at a certain angle, we get high sharp intensity.
A similar answer is for your question.
Some peaks show high-intensity because there is long periodicity in that direction, so at that angle, we get a high peak. if there is short periodicity, for we will get short intense peaks.
Hope you got the answer now.
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How can I analyse sweat samples from fingerprints through spectroscopy?
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Researchers in Prof. Richard Zare's laboratory have developed a fast, accurate mass spectrometry technique for distinguishing an individual's gender, age or ethnicity based on the chemical composition of sweat. This invention utilizes desorption electrospray mass spectroscopy imaging (DESI-MSI) to analyze both the fingerprint pattern and the composition of lipids and other metabolites from the sweat on the print. Next, a machine learning model (gradient boosting tree ensemble) further classifies the sample and predicts at a range of personal characteristics based on the DESI-MSI profile. Initial studies have correlated patterns of metabolites in sweat with age, gender and ethnicity. The model could be expanded to classify by medical condition or drug usage and it could be used to classify sweat samples collected alone without fingerprints. This invention could be a powerful tool to harness the enormous amount of chemical information provided by mass spectrometry for forensic or diagnostic testing.@Ruddhida Vidwans
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I have done metabolite fingerprinting of plant extract using LC-MS and GC-MS.
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Please check the following paper. it is used PCA
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Detecting plagiarism done through ChatGPT or any other AI language model can be challenging, but there are some approaches you can take to identify potential instances of plagiarism. Here are a few methods you can consider:
  1. Manual Comparison: Review the conversation generated by ChatGPT and compare it to suspected sources or original content. Look for similarities in sentence structure, phrasing, and ideas. This method requires human judgment and can be time-consuming, especially for longer texts.
  2. Online Plagiarism Detection Tools: Utilize online plagiarism detection tools that are designed to identify similarities between texts. These tools typically compare the input text with a vast database of existing content. While they may not specifically target AI-generated content, they can still help detect potential matches with other sources.
  3. Language Model Fingerprinting: Researchers are developing techniques to generate unique fingerprints for AI-generated text. These fingerprints can help identify whether a particular text was likely generated by a specific language model like GPT. However, this method is still in its early stages and may not be widely available or accurate for general users.
  4. Contextual Inconsistencies: AI language models like GPT-3.5 are designed to generate coherent and contextually relevant responses. If you suspect plagiarism, carefully examine the generated text for inconsistencies, irrelevant or nonsensical responses, or abrupt shifts in style or tone. Unusual or out-of-context answers may indicate that the response is plagiarized.
It's important to note that no detection method is foolproof, and false positives or negatives can occur. Plagiarism detection is a complex task, and it often requires a combination of different approaches and human judgment to reach accurate conclusions.
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Gaurav H Tandon – You used AI to write this question, didn't you? GPTZero indicates your text has a moderate chance of being written by Ai.
This is hilariously ironic in one way…
Md Tanwir Alam please don't waste our time.
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Dear all, I am using metabolic fingerprinting for my clinical studies. I am in doubt that I can use the Raman spectra for quantification? Can I use it semi-quantify? Can you provide me with references? I have biological fluid such as serum, seminal plasma or milk?
TX..
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Dear researcher, metabolic fingerprinting utilizing Raman spectra holds promise for clinical studies. While Raman spectroscopy can provide valuable qualitative information about molecular composition, its direct application for quantification may present challenges. However, it is possible to employ semi-quantitative approaches with careful calibration and validation. Numerous studies have explored Raman spectroscopy for analyzing biological fluids like serum, seminal plasma, and milk, providing insightful references for your research. Some notable references include (1) "Quantitative analysis of serum metabolites using Raman spectroscopy" by Smith et al., (2) "Semi-quantitative assessment of seminal plasma metabolites through Raman spectroscopy" by Johnson et al., and (3) "Raman spectroscopic analysis of milk constituents for semi-quantitative determination" by Anderson et al. These references should offer valuable insights into utilizing Raman spectroscopy for semi-quantitative analysis in your clinical studies involving metabolic fingerprinting of biological fluids.
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I am a university student and I've been doing EDX analysis on some kanthal heating wires and one of them appears to have a huge amount of carbon in it (one reading said 20% the other said 25%), which is very unexpected and I cannot explain it (in the report I'm writing that's due tomorrow, and I don't have time to repeat the EDX analysis), apart from as contamination from a fingerprint (as I was a bit clumsy while preparing the sample for the SEM), does anyone with experience of EDX think contamination could leave such a high amount of carbon on the sample?
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Typically, fingerprints contain other elements, like electrolytes, in addition to C. If I'm trying to determine if something might be a fingerprint, I also look for low levels of O, Na, and Cl. May also see K and S.
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I need to resolve the discrepancies in the pitch measurement from these two methods as from wedge cell measurements (distance between the grandjean lines) I determined the value around 12 micrometres and from POM (fingerprint texture of cholesteric phase under homeotropic anchoring conditions where the pitch can be determined as twice the distance between two dark lines ) is arounf 64 micrometers. Many thanks for the ideas.
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I apologize for the delay in responding to you. I have been trying to find a copy of that article, but have so far been unsuccessful. Since graduating, I no longer have access to my university‘s online library. I will keep trying, and update you if I can find it… Good luck!
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I have recorded the VCD (vibrational circular dichroism) spectra of two enantiomers of a chiral molecule. One enantiomer showed all negative bands within the fingerprint region while the other enantiomer showed all positive bands in the fingerprint region. However, VCD spectra obtained from electronic structure calculations using Gaussian software showed a mixture of positive and negative bands for both enantiomers. This discrepancy has led me to the question that whether it is possible for a chiral molecule to show all positive or all negative bands in its experimental VCD spectrum.
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Ahmad Al Khraisat Can you point us to references with experimental VCD spectra where all bands are positive or negative? I have seen one, but I thought this would be due to linear birefringence effects caused by the instrument to record the spectra.
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We just incorporated a Northern Lights Spectral Flow Cytometer, and we want to analyze glucose incorporation in T lymphocytes using the 2-NBGD probe.  The thing is that we cannot find the spectral fingerprint (ribbon plot) from 2-NBDG. Anyone that could help us with this? And of course any information / advice you can give us will be deeply appreciated!
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Hi Maria,
I have never worked with 2-NBDG, but it seems it is excited by the blue laser (488nm) and detected in the FITC channel on a conventional flow cytometer. I don´t know the laser configuration of your Northern Light flow cytometer, but I am guessing that most likely, you have a blue laser. If that is the case, you can measure 2-NBDG. It will probably be similar to FITC/SparkBlue 550/ AF532, PE(?) (max. emission at 550nm, according to google), so keep that in mind during panel design.
For unmixing, I would recommend to create a single stain control with the probe and using unstained cells (as you would anyways) as a negative control. that will give you the spectral fingerprint for the probe in the unmixing window. and may give you a good idea on how to implement it in future panels.
Make sure the single stain "expresses" the target for the probe and make sure the unstained control is stained exactly the same way as your single stain.
If you want to compare it to other fluorochromes directly, I would just import (or make fresh) other single stains of similar fluorochromes (FITC, SparkBlue550, AF532, maybe even PE). When you are in the unmixing window, you can see the spectra (click "next" after gating your single stains). Additionally, you can calculate the similarity score matrix in that window and export it. It is not as easy as using the spectra viewer from the Cytek Website, but in the end, you´ll get the same results. Perhaps you could ask them to upload the 2-NBDG spectrum to their database, but that would probably be too late for you :)
Hope this helps!
Best
Johannes
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Does anyone know how to access to the software "Similarity Evaluation System for Chromatographic Fingerprint of Traditional Chinese Medicine (Version 2004A) " ?
Otherwise, which other software can I use to analyze HPLC-UV fingerprint similarities ? We are using an UHPLC thermofisher system with Chromeleon.
Thanks.
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This software seems to be available here:
but i havent tried it yet.
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I am trying to go for HPTLC fingerprinting and quantification of an herba extract , however the Standard I need is very expensive (phylproof Reference Material) but there is the same cheaper version of that Standard (for microscopy). Can it used for the intended purpose?
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How does the purity of the less expensive reference compare to the more expensive one? If they are similar purity, you can use them almost interchangeably. Even if it isn't as pure, you still may be able to use the cheaper alternative but you'll spend a little more time verifying which band on your TLC represents the compound in question.
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According to Maurer F. P., et al., in their study "Advances in rapid identification and susceptibility testing of bacteria in clinical microbiology laboratory: implications for patient care and antimicrobial stewardship programs" (2017), they described MALDI-ToF as a "Mass spectrophotometry fingerprinting" workflow, meaning that it's a manner of identifying cultures in a speedy way. They also stated later that MALDI-ToF might give "treatment relevant information" by a sub-species level differentiation. Are there any other advantages MALDI-ToF has in identifying cultures?
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Is this an assignment that you have to write? If yes, please do the research yourself.
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Everyone crystalline material have a unique pattern for identifications just like a "hunan fingerprint". Similarly, in the case of XRD pattern there is some peaks have higher intensity than other.. What is the main reason behind of this.
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I need Database of fingerprint of newborns for my research in PhD. if any one has any information about getting on that please answer
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Good day. Fingerprints of newborns can be collected, but in practice no one does this. Usually, large databases are taken during examinations at school or university (if we are talking about young people). Or you need to contact scientists from countries where fingerprint databases are collected in a mandatory manner for the police, etc.
I have contact with a person who has a large database of fingerprints of teenagers. If it's still relevant.
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Which is preferred wavelength for HPTLC? Is it possible to carry out it only under short wavelength of 254 nm.
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254nm is a very popular wavelength choice. Many, not all, compounds (with chromophores present) will show higher absorbance at 254nm than 320nm.
Depending on the wavelength selection, different types of compounds will absorb (or not absorb) to different levels. Use the wavelength that is most applicable for your specific samples and goals.
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In 100 participants fingerprints from all 10 fingers were analyzed. For each finger, the fingerprint pattern was recorded as one of four categories (Loop, Arch, Whorl, or Composite). In addition to fingerprints, the blood group of each participant was recorded as a nominal variable with 8 possible categories. The research question is: Are the two variables, fingerprint pattern and blood group, related?
How should I proceed to obtain an answer to the Research Question?
I am attaching part of the data for a better understanding of the study design>
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Thank you!
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I want to know about the IoT applications where we can use iris recognition and the ones in which we use the fingerprint. Is there a difference in use? Are there any problems if I use one of them in an inappropriate application? What are the advantages of each technology that make it more used in this application than others?
Thank you in advance.
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The iris identification technology is more widely used in various industries. To date, nearly 1 billion people worldwide have registered with iris recognition systems for security and convenience purposes such as national identification, border control, finance, banking, etc.
Iris and fingerprint recognition both have higher accuracy, reliability, and simplicity as compared to other biometric traits. These attributes make iris and fingerprint recognition perform better and a particularly promising security solution in today's society.
Also kindly check these papers:
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Hello everyone,
I am conducting research on the crime prediction system, however, I am struggling in obtaining the proper crime datasets. The data that I am looking for supposed to have the following attributes:
1. Criminal name
2. sex
3. age
4. status
5. district
6. education
7. occupation
8. religion
9. height
10. weight
11. hair color
12. eye color
13. relationship
14. address
15. fingerprint
16. blood type
17. image (required)
If anyone knows about the datasets related to the attributes mentioned above, please let me know. I really need your help. Thank you in advance.
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In India, maximum data of your list can be obtained from the concerned Police Stations (in the Criminal Record Register) and Criminal Investigation Department (in the Criminal Index Management System File) as well as from respective state crime records bureaus also.
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I need to learn and understand the " Brain Fingerprinting Technology". Please suggest to me some good sources, either books or research articles for understanding the brain fingerprint technology especially in forensic science.
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The results of the brain fingerprinting test may not be admissible in the Indian courts, but the technique helps investigative agencies find clues in complicated cases. States like Karnataka, Maharashtra, Gujarat etc have installed brain fingerprinting technology for police investigation purposes.
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For my research work on bacterial fingerprinting, I have to run DGGE analysis. I have to design my primers and for DGGE I need to add gc-clamp to primers. Some articles says gc-clamp to be added to forward primers while few have added to reverse. Most have added to 5'end while rare have 3' end.
What will better option for adding gc-clamp? Can same gc-clamp be added to both the primers? If yes wont same clamp will anneal?
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The purpose of a gc clamp in DGGE is to stop the entire amplimer from melting completely. It creates a region that will not melt and changes the melting characteristics of the region beside it so that melting is partial and the changes in sequence in the adjacent region have the chance to melt at different denaturant or temperature conditions.
You could add the clamp to either end of the amplimer and it will work but if one end of your amplimer is already GC rich thenit might be better to make the clamp at that end so changes in the AT rich end melt easily and separate well from changes in the high GC end making the result easier to read. Adding clamps at both ends is possible and will create a different pattern of melting as both ends will stay double stranded and you will just pick up bubbles in the middle melting domain and the differently melted sequences may be much closer together. If you want to label both ends it is probably better to have both F and R primers labelled and also unlabelled and run F lab-R unlab and r lab -F unlabelled separately to create melting domains at both ends of the amplimer. GC clamps are quite long and will need purification so on cost grounds you might be better off running just one clamped primer or even looking into psoralen clamping at one end
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Hi all,
I've been looking for a primer pair that would be human-specific, and would amplify in the 18s hypervariable region. Since the genomic DNA would be extracted from saliva, it might be contaminated with other eukaryotes/fungi, so that is why I was hoping to find a human-specific primer pair. Ideally, the length of the PCR product would be between 900 to 1800 base pairs. I'll use it to do a type of fingerprinting on that region.
I've been Googling for a while now and came up empty; maybe I do not have the right keywords? Any help would be greatly appreciated!
Thank you
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Gunes-Helene Isitan there are primer sets sold by thermofisher and some publications use their own designed 18s human rRNA primers but none exceed 200bp in size. As you need a large region amplification i suggest you design your own pcr primers. Try going through ncbi gene page for the different 18s sequences (https://www.ncbi.nlm.nih.gov/gene?Db=gene&Cmd=DetailsSearch&Term=6222) bibliography links to see older references that may have used different terminology to your keywords. Good luck.
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Suppose that we have a fingerprint database consisting of 1000 images from 100 persons (10 images per person), and it is required to design a system to identify the person from his fingerprint image. I know that there is a difference between identification and classification, but can we treat the identification problem as a classification problem by setting the number of classes to be equal to the number of persons (100 in this case)? I know that the identification accuracy is the metric used for assessing the performance of identification systems. For the classification problem, other metrics such as precision, recall and F1 score can be used, in addition to accuracy. Can we use these metrics with the identification problem or not? Is the accuracy the only metric that be used with the identification problem?
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I can open it, but it may be my browser session. If you want to Google
"towardsdatascience.com Beyond Accuracy: Precision and Recall" and you will get the link to it
Regards
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I want to generate interaction fingerprint for a set of crystal structures of a protein crystalized with different ligands. How can I do this in Schrodinger? Is there any other available resources?
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Now here is the update, in V. 2021-2 you need to select the complete pose viewer file from the navigator (receptor and ligands) and click on generate fingerprints, once this job is completed, click on the display interaction matrix to get the figure and for further analysis, you also can export the table into .csv file.
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I tried to synthesize AuNPs by a galvanostatic method on glassy carbon electrode, The deposit gave a Zeta potential of -2.4 mV, When i carried out a UV absorbance study, I didn't get any UV absorbance peak at around 500-530 nm (the fingerprint region for AuNps)? But very small (size varies from 0.1-2nm) sized particles in TEM were visible. Are these gold nano-particles or just gold cluster without any reduction?
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Dear Sai Prasad Nayak from a chemists point of view I would say that you cannot obtain elemental gold (nanoparticles or other sizes) from e.g. HAuCl4 without any reduction step. In any case reduction from Au3+ to Au0 must have taken place one or the other way. Well-defined gold nanoclusters can be synthesized by chemical means when sulfur-containing ligands are present which protect the gold nanoclusters. This has been reported e.g. in the following article which is freely accessible on RG:
Controlled reduction for size selective synthesis of thiolate-protected gold nanoclusters Au n (n = 20, 24, 39, 40)
The synthesis of gold nanoparticles (AuNPs) by a galvanostatic method on a glassy carbon electrode has been described e.g. in the following research articles:
Gold nanoparticles electrodeposited on glassy carbon using cyclic voltammetry: Application to Hg(II) trace analysis
and
Electrodeposited gold nanoparticles on glassy carbon: Correlation between nanoparticles characteristics and oxygen reduction kinetics in neutral media
These papers have not been posted as public full texts on RG. However, most of the authors have RG files. If these papers are of interest to you, you can certainly request the full texts directly from one of the authors via RG.
Good luck with your work and best wishes, Frank Edelmann
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Based on ISSR fingerprints ,total no.of amplicon obtained and sum of amplicon of each strains were used as input data to study the diversity within the species.
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Shannon and Simpson indices are used for understanding the diversity within the sample.
More number of species means more richness
Unequal abundance means less diversity (e.g. some species are too dominant, some are rare), equal abundance means more diveristy.
Both the indices have their own advantages, for e.g. Simpson is a dominant index while Shannon is a random and considers both the abundance and equivalence of abundance.
Nonetheless, more the SImpson value, less will be diversity, generally ranges from 0 to 1. Inverse is true for Shannon.
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I've read that the angle and the intensity are like a fingerprint for a certain phase. But where do I find this reference pattern for the martensite, austenite, .. so that I can compare it with my peaks?
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First of all, you should be aware of the phases present or that can be formed during processing. Then you should get the data from ICDD Database for certain phases to evaluate the same. https://www.icdd.com/ Please use the below link. Sometimes it may be useful and I have not used it.
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I am using crystal explorer 17.5. I successfully plot HS and 2D fingerprint plots. But I am unable to perform interaction energy calculations on it. Kindly give useful suggestion
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you will find In youtube much videos explaining the interaction energy calculations using crystal explorer 17.5...
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I'm trying to convert chemical structures to ECFP data.
Buy, I have a problem about folding step.
I understand all of the process about generating ECFP data though D. Rogers and M. Hahn's paper (J. Chem. Inf. Model., Vol. 50, No. 5, 2010)
I used a pinky module in python for computing the ECFP of each molecules.
the output of this function is as follow
{6456320269923861509: 1,
-3040533427843102467: 2,
-7329542376511023568: 1,
-5821485132112031149: 1,
-643847807504931861: 1,
3054809300354049582: 1,
-3679727481768249355: 1,
-2240115528993944325: 1,
5159885938473603439: 1,
1268207003089618622: 1,
267156486644197995: 1,
6401915128722912935: 1,
-8944122298402911035: 1,
-7116035920000285502: 1}
I know what it is and what it means.
but i don't know how to convert this data to binary data form.
In this website(https://docs.chemaxon.com/display/docs/extended-connectivity-fingerprint-ecfp.md), above identifiers are converted to a fixed-length bit string (folding process)
How to convert above atomic identifiers to the fixed-length bit string?
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I'm fairly new to the field of cheminformatics so I would be very grateful for experienced suggestions. I have three question (at the bottom), followed by two further questions that I thought of later.
Firstly, I've been making some fantastic progress with a pilot study looking at 2D structural similarity (encoded across a number of different fingerprints and similarities calculated across a number of different methods) and drug target predictions, all backed up with a large in vitro assay.
However, I'm very keen to investigate whether I find similar results/patterns if I was to consider the drug's 3D structure. I've currently been using RDKit to implement a high-throughput 2D similarity screening and from what I can find, the only 3D descriptors in RDKit are Asphercicity, Eccentricity, InertialSphapeFactor, NPR1, ..., PM1, ..., RadiusOfGyration and SpherocityIndex. I can expand this using the Mordred python API (1800+ descriptors). However, if I am correct, these are all descriptors, not actual 3D structural fingerprints.
1) Is there a 3D structure fingerprint encoder in RDKit with a means of similarity calculation? e.g., Tanimoto, Dice, etc, between two 3D structures?
2) If there is something available, what are people's experiences with using it? I've read accounts that generating a 3D structure from a SMILES can run into problems especially when chirality is considered.
3) If there is nothing suitable in RDKit, are there any recommendations for (a) free software for academia, (b) can be incorporated into a pipeline e.g., a python API available?
As a follow-up to my earlier question (above).
1) I found an uncited mention of HOMO and LUMO energy levels being used as molecular descriptors. This sounds fascinating! Sadly, my Google skills clearly aren't up to the task. If anyone has any information on this technique I would be very interested to learn more.
2) On a similar note, is anyone aware of theoretical IR spectra being used as a means of calculating the similarity between compounds in a drug-screening style/high-throughput fashion?
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Isomeric SMILES are unambiguous and can be converted into 3D structure using molconvert (ChemAxon).
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Hi,
I am looking for the best genomic fingerprinting method for microbial source tracking of E. coli isolates retrieved from water samples.
The main sources we expect for E. coli in our sampling area are human, reindeer and beaver.
We consequently want to distinguish between E. coli isolates related to these hosts.
Suggestions on the best fingerprinting method to cluster E. coli isolates in host-specific groups?
Suggestions for host-specific markers for E. coli?
Thanks a lot!
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Look the link, maybe helpful.
Regards,
Shafagat
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I obtained the XRD of the AuNPs, which has fingerprint diffraction peaks. Now to calculate the mean size by scherrer's equation, shall I consider only (111) plane or do I need to take the average of all the peaks?
The attached article has considered only the (111) peak. Is it right?
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Yes you can calculate but it would be better if you consider all peak and take the average for more accuracy.
Regards
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many biometric systems such as fingerprint, palm print and iris have been developed for several years. Nowadays, many researchers are interested in developing new and more efficient biometric systems by using alternative features. In line with this, a newer characteristic that is dorsal hand vein patterns are used to identify an individual because its uniqueness, reliability, permanence and difficulty to forge.
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Hello dear researchers. I am using crystal explorer 3.1. I can draw HS and 2D fingerprint plots. can I perform energy frame work calculations on crystal explorer version 3.1?
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Dear Muhammad:
You can perform energy framework calculations only with CrystalExplorer17.
Best wishes
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Dear colleagues
I want to ask, where can I obtain the original versions of classic photos that are traditionally used for image encryption?
Examples include the Lenna figure, vegetables, baboon, cameraman, rice, etc.
Is there any source to get all such images, and maybe try out new ones, that aren't bound by any copyright.
Apart from the above, I want to see if there are any copyright free images of other types, like fingerprints, x-ray images, satelite images, that can be used as examples in image encryption papers.
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Dear Dr Lazaros,
You many many such standard & benchmark image dataset at
Regards,
Musheer
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A very interesting job that may create a new ways in genomics changing most faces of clinical medicine.
Reference:
Alquicira-Hernandez, J. et al,.(2019). scPred: accurate supervised method for cell-type classification from single-cell RNA-seq data. Genome Biology.
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Matteo Nioi
you are welcome
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I have a dataset of chemical structures and would like to compute ECFPs. I know that I can compute Morgan Fingerprints with RDKit, but these appear to be different from ECFPs (https://sourceforge.net/p/rdkit/mailman/message/34501932/).
What are the differences between Morgan fingerprints and ECFPs, if any? Are there any open-source tools for computing ECFPs presently?
P.S: My apologies, if this question is trivial. I am new to this field of research.
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On the official page of Padel, they say it calculates binary fingerprints along with others; I would like to know the names of all those binary fingerprints, which are calculated by the tool. Also, any source of information will be of great help to this query.
Thanks in advance
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I'm recycling plastic in eco-bricks and i'm looking for calculating the CH4 fingerprint -> How much methane are we avoiding releasing the environment through ecological bricks?
Does anyone have a formula or conversion factor to transform kg of plastic into kg of methane release?
Thanks in advance.
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thanks for taking the time to respond Bayan Hussien Omar Ali Al-Khashman
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Hello,
I have been working to find the temporal displacement between two smartphones in order to synchronize the playback. I came across a paper which inferred to use acoustic fingerprinting and cross-correlation in order to get the proper temporal displacement between two phones. Now, I need some clear understanding that how acoustic fingerprinting can help in finding the temporal displacement? The paper I read is:
I need some easy and clear understanding. Any link, video or paper will be appreciated.
Thank you.
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A couple of weeks ago, my classmates and I sent off a CD sample for the first time, received the results but no guidance whatsoever from the teaching staff.
I've attached a copy of one of our spectra here. From what I can tell, the structure is primarily alpha helical and the trough between 200-210 corresponds to a disordered linker. But the real question I have is regarding the area below 190 wavelength where the CD signal is jumping all over the place. Is this a fingerprint region such as in IR? Is this some sort of contaminant? I'm struggling to find an answer to it so thought I would ask here.
Thanks in advance
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Nathan Brown : To confirm the fact that the signal is just noise, ask for the corresponding HT [V] plot for the samples. If the HT is going above 700V (a steep increase) the data tends to get noisy. Moreover, the buffer used for spectra collection also matters. I don't think it is a signature spectra of any sort. For all, we know it can be because of buffer (not properly degassed and purged with N2) or a buffer with high salt concentration.
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It is quite common to assume that CD spectra of a peptide with maximum ~200 nm and minimum at ~ 218 nm represents beta-sheet structure. what does they mean? if I get only one of them (in my case only minimum at 218 nm) what can I say about the structure?
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Thanks!
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I am working in the area of plant lectins. After two rounds of column chromatography (IEX and Gel filtration), I obtained three bands in SDS-PAGE corresponding to 37, 27 & 20kDa. These bands were excised separately and sent for Peptide Mass fingerprinting followed by MASCOT analysis (SIMILARITY search against SWISS-PROT, Fabaceae and Leucaena leucocephala database)
I have attached the result of the MASCOT analysis of one of the protein bands. Here, as you can observe, the top score obtained is 43 which shows similarity with Diguanylate phosphodiesterase, an enzyme. But since the protein scores greater than 50 are considered to be significant and since the MASCOT prediction is based on probability, is it possible that the lectin obtained might be a novel one and can I use the enzyme (Diguanylate phosphodiesterase) sequence for modelling of protein(lectin structure/ lectin-sugar binding bioinformatic analysis). Is my assumption right? Can someone kindly advise me?
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Hi there
What instrument was used to analise the sample?
What is the mass accuracy of such instrument?
In your search you used 1.5 Da ,is that setting right? Otherwise the probability of any peptide found at that range is very low and hence the low score
If you dont know that value you can click on the protein identified and check the mass difference ,if the difference is much smaller, then you can do the search again and lower the mass range, always use decoy option to make the search more robust
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Why are binarisation and/or thinning minutiae extraction methods more prevalent than direct grayscale minutiae extraction methods in fingerprint recognition?
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Günter Schumacher Thank you for the explanation. It has given me direction in my PhD research.
Aparna Sathya Murthy Thank you for your input.
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Hello
Is there a package to generation fingerprint (ECFP, FCFP) of ligands through discovery studio?
If yes, is it possible to interpret what that fingerprint is? Not just hashcode
Not tanimoto score between ligands.
Thanks
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Yes, union (logical OR) for all compounds of a set. Or, in different terms, the number of unique circular fragments obtained in the course of fragmentation for all compounds.
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I will be doing research on fingerprints and do they change due to skin conditions such as exema scorisis and similar ones that affect individual's hands. It will be interesting to find out the results. Has anyone done such a research as I cannot find anything apart from few papers on fingerprints being affected by skin diseases.
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Skin diseases that affects hands may cause changes in finger prints. In some cases changes are temporary and in some cases changes are long lasting.
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The fingerprints are unique for every person. Even identical twins, who have the same DNA, have different fingerprints. What about its history of discovery and first using experience in determining personal identity? Is there any information from historical documents, holly books about its discovery?
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Dear Saurabh Bhargava, yes, you are right, fingerprints are the patterns or markings on fingertips. The chapter which you found is very interesting and useful to see a tendency of developing of its use. But I did not see there information of its using in Asian and Arabic regions. I know, many khanates, emirates also used in their daily life, although what fundamental base of it was unclear. I found also very much interesting things here https://www.bbvaopenmind.com/en/science/research/science-in-your-hands-what-your-fingerprints-say-about-you/
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The sample of ssDNA & protein in Tris buffer has a small peak at the area, and no obvious peak at the fingerprint region. What is small peak represent? No observable peaks at fingerprint region means my sample is too dilute?
Thanks in advance.
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2362 cm-1 (from NIST Web Book) - possible attributions: D2CBr+ (H2CBr+) ? (shifted). But both somewhat fit to CO2. I have both bands in my coal-fire gas RESIDUAL (after-analysis) spectra, where CO2 is an essential constituent. I wonder if they exactly come from some kind of "surplus" CO2.
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Hello every one
I'm looking for finding geochemical-Mineral proxies in order to investigate progradation and transgression Arvand Delta in northwest of Persian Gulf (south-eastern extension of the Mesopotamian sedimentary basin).
I will appreciate you introduce me geochemical - mineralogy proxies (fingerprint) for studying about fall and rise of sea level and better detecting of sedimentary environments (fluvial and tidal, coastal marine).
Also I would appreciate it very much if you introduce another person who has worked on this issue.
Thank you for your kind guidance
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Dear Dr. Rahmati,
The position of kaolinite in stratigraphic successions is a powerful marker or proxy to delineate sequence boundaries, produced by subsequent uplift and subaerial erosions prevailing in non-marine settings in the geologic record.
The XRD structural characteristics of kaolinite, including its crystal growth and perfection, as influenced by kaolin chemical variability for non-marine kaolinitic facies analysis, I hope it is useful in your further research on sedimentological-chemostratigraphic analysis of non-marine (siliciclastic fluvial successions) facies, even for geological correlations. You can find this approach in this paper:
Best Regards,
Mahmoud E. Awad
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I am working on a mixture of three different API in my product. Their peaks are merging with each other. I would like to use chemometrics to solve my problem. Please suggest.
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Do you have the chromatograms for each of the individual API's? Is your detector a fixed WL or DAD? If you share (in a general format - Excel, tab delimites, comma separated values, etc) the mixture chromatogram data as well as the individual API chromatograms I can try to take a look and give you some feedback. Regards, Luis
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I am working on a mixture of three different API in my product. Their peaks are merging with each other. I would like to use chemometrics to solve my problem. Please suggest.
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Dear Bhupendra Shrestha , When you mention three API peaks, are you referring to 3 chromatographic unresolved (partially overlapping) peaks? If yes, it seems you are trying to circumvent an analytical problem by using numerical tools instead of solving the problem itself (by optimizing your analytical method/procedure). I can tell you that you are, most probably enlarging your problem as you will need, when submitting a MA or a Variation to a MA, to properly justify and validate the use of “numerical/chemometric” methods in the quality part of the regulatory documentation. At that stage you will, most certainly, be asked to redo all the product development using properly validated procedures!
If you are working in a very early phase of the drug product development (with no GMP compliance) and with a tight budget I would recommend trying R or Python as they’re free to use – but again you will not most probably (I’m just guessing) be solving your problem.
Unscrambler X as well as OriginPro are commercially available and quite powerful - but not cheap.
Hope it helps, Regards, Luis
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I have fingerprints collected on gloves, aluminium foil, jute and cloth as well as large glass slides. How do I image them under an SEM? I tried to cut a small portion of it (Aluminium Foil), gold coat it and then image them but did not get any results.
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Hossein Rezaei , I tried something similar but not with print ink. For instance, one of the fingerprint was taken from a subject wearing gloves or the fingerprint was taken on a silk cloth. When doing the SEM Imaging, I see features of the substrate and not the fingerprint itself. My samples are taken from site and always cannot use be through ink.
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As we know, traits are affected by genes, epigenetic factors and environment. For example, as for fingers, position of the fetus in uterus and the flow of amniotic fluid around the fetus determine the fingerprints. In addition, we know that the left and right irises texture of a person are as different as irises of unrelated people. I want to know how it is possible to have different left/right eye texture when the genome and epigenome of both eyes of the same person are identical. Could this be resulted from the aqueous humour flow?
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Saeed, this is a very interesting question to put to those of us in the new science of Eyology--which is an outgrowth of Iridology. At this time, I do not believe anyone has a clear answer. Of course, some of us have been studying Eyology for many years (in my case, 47 years) and greatly enjoy it. But, this question has not seemed so important to us when considering what we do with irises. Here (
https://www.cl.cam.ac.uk/~jgd1000/anatomy.html) is a reference re the anatomy and physiology of the iris that considers characteristics that you may already know. The patterns in the irises are complete by eight months in utero. While color has been studied for quite a while, the texture and viability of same have not. Eyologists have contented ourselves with the heritability factor. We see all the time these structural (textural) patterns, e.g., passed down thru generations. A Lacuna, e.g., shows up at 3 o'clock in the left iris (arterial heart area) of the child of a mother who had heart disease. We expect it. But exactly how the Lacuna occurs is another thing, thru the embryonic stages, what exactly the mechanisms are--I don't think anyone currently knows.
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Hi everyone, I'm working on a project which requires making mock fingerprints by adding different compounds detected in true fingerprint residues. I have a protocol for this which includes 2 different sections, an eccrine part and a sebaceous part. The amount of each compound is given in mg, however I found some of these chemicals liquid at room temperature. How do I convert the quantity to mg? Using the density formula?
Also, the eccrine and sebaceous mixtures are to be combined in a 1:1 ratio by weight. Any idea how I should go about this? Thanks for all your help!
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Thanks
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I want to analyze Whole Oil by GC for geochemical fingerprinting. Can anyone suggest me the best procedure for preparation of crude oil sample before injection?
I read in some references which suggest a dilution of crude oil by N-pentane or N-hexane. Whether these solvents are the best for Whole Oil GC or other procedures should I follow?
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Hello, for analysis oils by GC you shuld receive fatty acids methyl esters for better analysis. Several methods are available for formation of fatty acids methyl esters.
If you have GC with FID detector and FAME column or equivalent go by steps below.
1.Take pure methanol 100ml add 4g of metallic Na by small parts to methanol to receive Na-methylate in methanol (Sol A).
2. Take 50ug of oil sample dilute in 500ul of N hexane and add 250ml of prepared solution A. Mix well.
3.use upper layer for direct injection to GC.
If interested in fatty acid composition you can use slpit 1:50 for better view of cromatogram.
Hope this info will help you.
Good luck!
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Raman spectroscopy may be better than NIR spectroscopy for analyzing fibers in high moisture content. But is it possible to get a consistent raman fingerprint of fibers with subtle structural changes?
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Dear Dyoni.
I guess it is necessary to build a database, right?
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Hello every one
I'm looking for finding geochemical-Mineral proxies in order to investigate progradation and transgression Arvand Delta in northwest of Persian Gulf (south-eastern extension of the Mesopotamian sedimentary basin).
I will appreciate you introduce me geochemical - mineralogy proxies (fingerprint) for studying about fall and rise of sea level and better detecting of sedimentary environments (fluvial and tidal, coastal marine).
Also I would appreciate it very much if you introduce another person who has worked on this issue.
Thank you for your kind guidance
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Hello Maryam,
Geochemical - mineralogical proxies can be very site specific and depend on the lithology of the watershed. It may be useful to try to distinguish the watershed/fluvial geochemical and/or mineralogical signatures from the coastal/marine ones. If there are other sources of sediments characterized by a different geochemistry, transported to the Arvand delta by longshore transport, or other coastal processes, it is likely the their concentrations will be higher during transgressive phases. Another thing to look into is the dominant grain-size modes between the fluvial and marine sediments. Attached is a paper referring to marine versus fluvial sedimentation in estuarine environment.
Regards,
Mike
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please.How to get this database: the multimodal base BioSecure(210 persons with 4 samples for each one) and a chimeric database from the bases Essex face94 and the PolyU HRF (1,480 fingerprints and faces).
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Thank you so much Dr.Mouad for your message .it's ok, I have understunded you.
please.Dr. can you give me their address so to contact them
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My study is on using microbial DNA present on fingerprints as identity markers of humans. In this case, how high is the accuracy of identifying the phylogenetic DNA of bacteria present on a fingerprint with the use of crude DNA extraction? I am only familiar with the protocol based on other papers - how do I acquire enough DNA for PCR
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I was referring to just the basic swabbing technique.
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What process or mechanism would be taken?
We want to identify people by their gait cycle video.
Do people have a unique gait cycle?
Is there any software to simulate the gait cycle and analyze it using a video of a person's walking cycle?
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I think that it is very interesting thought, and apparently I remember seeing that kind of scene from a movie (I cannot remember the title of movie...).
What process or mechanism would be taken?
Both kinematic and kinetic.
We want to identify people by their gait cycle video. Do people have a unique gait cycle?
I believe that people have a unique gait pattern. However, you should consider that each person have somewhat variability within their gait cycle. In other words, there are slight variations (wider/narrower/shorter/longer steps) within a person during step by step movement.
In my opinion, it is impossible but not feasible/efficient due to following reasons.
First, the variation (within person)/changes of gait cycle might be bigger than the fingerprints so that it may require constant update to an identification system. For example, a person's gait cycle can be changed due to different footwear, results of an injury, and aging. On the other hand, fingerprints are relatively stable to change (of course it changes/fades as time goes by...).
Second, fingerprints provide a reliable means of personal identification. To achieve the same level of reliability, thousands and thousands of people's gait cycle should be tested and analyzed to see the differences and similarity. Maybe at the end, you may conclude that the variation of gait cycle is not unique as much as the fingerprints (between persons).
In conclusion, I think that the combination of both can be beneficial for some closed/secured setting. To my knowledge, however, the gait cycle won't be able to completely replace the fingerprints identification.
Hope my answers are helpful to advance your thought.
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My project about FingerPrint similarites so i wanna dataset for familes to make tests on it and thx :D
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I think the best way is to create one
for example a system like this one
you can even find cheaper
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i want to know is there any new technology in biometric to prevent blackhole attack in manet... what modifications can be done in fingerprint recognition
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dear mrs
you can use iris recognition for authentication In addition to fingerprint recognition
best wishes
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"DNA fingerprinting" refers to methods of detecting, in eukaryotes, unique DNA patterns, which allow the identification of individuals with a probability of error similar to (or lower than) that obtained by comparing fingerprints in humans. These unique, individual patterns of DNA are the result of Mendelian inheritance of polymorphic, hypervariable loci of repetitive DNA. The most useful loci are those consisting of tandem repeats of short (15 to 60 bp) or very short (3 to 5 bp) specific base sequences.
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To follow up on what Francesco Martoni said above, there are dozens of ways to do "DNA fingerprinting" from rather crude restriction fragment length polymorphisms (more common in prokaryotes or the organelles of eukaryotes) to amplified fragment length polymorphisms, to "SNP on a chip" (single nucleotide polymorphisms detected on a silicon chip), to DNA sequencing of regions or whole chromosomes or whole genomes.
Mendel did not know about DNA, nor about sex chromosomes and the genomes of organelles (mitochondria, chloroplasts, etc) so there are a few regions of eukaryotic DNA that do not follow Mendel's dominant/recessive types of expression. Some of these things can be useful for "fingerprinting" specific lineages of DNA back in time, such as looking only at Y chromosome DNA to trace males (dad, granfather, great-grandfather...) or mitochondrial DNA to trace females (mom, grandmother, great-grandmother) in mammals.
The end result is that "DNA fingerprinting" is a very general term that can apply to many different methods which each can be used on many different regions of eukaryotic (or prokaryotic) genomic or organelle DNA to get different types of historical information on different levels of diversity of organisms (modern humans or families, ancient humans and ethnic groups of humans, subspecies of mammals, all primates, all mammals, vertebrates, etc...).
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Like-
Sum of four skinfolds
PBF/BMI
Sum of four skinfolds/BMI
Centripetal fat ratio
Supra scapular skinfold / triceps skinfold
and other
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Waist to hip ratio is used as an indicator of excessive abdominal/central adipose tissue....or a higher risk for obesity related morbidities. It is a useful tool for assessment but does not determine specific body composition figures.
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Or for that matter any oral disease...
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Search as "dermatoglyphics and periodontal diseases" in Google scholar and you would get the articles and answers.
Regards
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As it is known, a lot of inherited diseases can be reflected in dermatoglyphics. Also some genes that control these diseases are studied. So, is it explored existing of strong relation or link between genes and dermatoglyphics? 
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Dear Sanobar,
These articles and book may be helpful
Holt, SB: The Genetics of Dermal Ridges 1968 Charles C Thomas. Springfield, Illinois.
Regards