Science topic

Dendrobium - Science topic

A plant genus of the family ORCHIDACEAE that contains dihydroayapin (COUMARINS) and phenanthraquinones.
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Through a dedicated year of research, successful outcomes were achieved with Arundina species, showcasing germination manifested by noticeable color shifts and protocorm development within a mere week. However, my current focus on Dendrobium Nobile presents a perplexing challenge. Despite meticulously replicating the treatment and maintaining consistent environmental conditions, repeated experiments have yielded no results even after a span of 10 days. It's worth noting that all variables remain constant, including the freshness of the seeds. The only noteworthy divergence is the time of sowing; whereas the earlier success occurred in September, the current attempts are unfolding in the months of July and August. Could this shift in sowing timing potentially account for the observed non-germination tendencies?
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I believe Orchids are an exception to many a Groningse moestuin/norm. Orchids flourish with a lack of attention.
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While working with taxonomy of Indian Orchids in past two decades, I have witnessed many merger and splitting of genera mostly as a result of phylogenetic analysis mostly based on molecular evidences. The circumscription of larger genera like Bulbophyllum, Dendrobium etc. with wider morphological variability have been expanded with merger of well established smaller genera; whereas, genera like Eria, Habenaria etc. are being splitted with many combinations. The examples are unlimited, but everywhere the logic is to make the genera monophyletic. The problem in Vandaceous genera are even more inconsistent. The question is on the perception of the authors. When we have taxonomic hierarchy like sub-genus, Section, Sub-section etc. to fit all the heterogeneity, why not use them instead of creating many small, narrower genera or merging smaller ones into bigger genera with wider circumscription.
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Roman Bohdan Hołyński gave the answer in a nutshell. The bad thing about the monophyly requirement is, that by and large it has become a dogma. Any dogmatic approach to a scientific question is in itself suspect.
Be aware of the logical conflict in the monophyly concept that has been pointed out by Roman Bohdan Hołyński (an by others before him). And then, ask yourself, non-dogmatically, what do you wish to achieve. The monophyly concept is relevant for classification, and it is valuable as a method to assess the "value" of any proposed classification. Nomenclature is an entirely different concept, and serves communication. We have grown to accept that the names of organisms must reflect their classification; but when accepting this becomes axiomatic, it reflects negatively on the usefulness of names as information vectors. When we wish to address a taxon that is worth while being recognized, because it is recognizable and we want to communicate about it, it is not primarily relevant that the taxon be monophyletic. Changing names each time a new classification hypothesis is proposed impairs the usefulness of names as information vectors and, in the long term, is contra-productive.
Even when one is reluctant to abandon full congruence between classification and nomenclature, one should bear in mind that translation of the first into the second is not a strait-jacket but leaves options; and it is the duty of responsible biologists to choose the option that is least disruptive with respect to familiar usage, and is most robust under the variation in classifications, or phylogenies, that are likely, if not certain, to occur in the future.
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I am studying the flower initiation and the genetic reasons behind it in orchids.I have noticed certain dendrobes like dendrobium aphyllum specially leaves are totally gone when flowers bloom. What can be the possible reason? How can I study the gene expression patterns controling such activities?
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Hi Paromik,
I have a large orchid collection and grow several of the deciduous species in genus Dendrobium section Dendrobium, including Den. aphyllum. My guess is that the genetic basis for their deciduous character is the same as that for other deciduous plants (i.e stress cues such as lack of moisture, change in temperature, light levels and day length will induce senescence of the leaves and then leaf drop via their abscission layer, which is clearly defined in Dendrobium leaves). BTW, I'm a structural biologist and not a plant scientist, but a quick search showed me that your question doesn't seem to have been clearly answered for even well-studied plant species (but don't take my word for this, I'm not an expert in this field and I did not carry out an in-depth search for papers on the subject).
I guess that you would need to collect leaf samples during different seasons and study their mRNA and microRNA pools that might indicate changes in gene expression.
Here's what I know from growing these plants for many years. The deciduous species in this section live in areas with clearly defined seasons and they shed their leaves during the dry season, which coincides with winter in the northern hemisphere. A combination of environmental conditions results in the loss of leaves:
  • in winter they don't receive rain for 2-3 months (they store water in their succulent stems to survive this period and reduce water loss by shedding all their leaves),
  • the temperature drops considerably in winter (sometimes to near freezing at night) compared to the height of the growth season (30-40 degrees C at noon in summer),
  • the species in this section of the genus Dendronbium come from subtropical rather than equatorial regions and therefore are still subject to changes in daylength (a well-known cue for senescence or flowering in many plants),
  • yet they actually receive more light in winter than in summer (even though they days are shorter) because the trees that they grow on also shed their leaves in winter, so they get full sun in winter and shade from the surrounding canopy for the rest of the year.
The most important cue for loosing their leaves seems to be the lack of rain. Even if you provide all other cues, they will not drop their leaves as long as they have enough moisture. Flowering is only triggered by a combination of all of the above factors followed by an increase in day length and temperature in spring. Lack of any of the aforementioned factors during the rest period results in very poor or no flowering. In particular, excess moisture that inhibits leaf loss during the dry season will result in lush growth in spring and in the production of keikis (daughter plantlets) instead of flowers from the nodes where the flowers should emerge. Even a plant that has been provided with all the right environmental cues during the dry season and lost all its leaves will not flower properly if it receives too much water in early spring just before the flowers start forming. This seems to be a survival mechanism whereby these plants prefer to use the extra moisture to grow into larger plants instead of for producing flowers. I assume that the reason for this is that larger plants stand a better chance of surviving a really harsh dry season in the future.
I hope this helps.
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I had carried out a micropropagation work of Dendrobium nobile using in vitro raised explants nicely before and from the excised explants shoots proliferated nicely,. But when I tried the same with in vivo explants from wild I am getting hardly any shoots getting proliferated however PLBs are coming? what may be the reason? I used mercuric chloride, detergents, Sodium chloro hypochloride and alcohol for sterilizing explants? Can they affect the regeneration process? I am enclosing our previous paper which will help you explaining my query.
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TDZ is basically defoliant when used on plants growing in natural environment.  The in vitro grown explants are grown in a protected environment to the extent that they get glucose/ sucrose as readily available carbon source.  The metabolism of the tissue grown in vitro is entirely different (that is why the plant-lets need to be acclimatized when they are transferred to soil).  Therefore the chemicals which are used in vitro act differently than in vivo conditions.  I would like to mention my observation  when I use TDZ is that  it gives good response when 3 to 4 % sucrose is added. 
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Orchids, H3K4me2, enzyme digestion timing and concentration etc
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Besides, won't you expect the majority of cells (>80%) in interphase at any given time? Unless you arrest the cells with nocodazole, that is! 
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I have successfully acclimatized various species of tissue culture raised Dendrobiums. Although they are thriving well in greenhouse/growth chamber conditions (almost 1 year) flowering is not noted. Can anybody suggest how I can induce the flowering in these greenhouse hardened plants?
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According to Lavarack, "to grow and flower well, this species [D. crepidatum] must be given intermediate to cool conditions with a dry resting period in winter and early spring, During this period watering should be much reduced with the plants drying out and remaining dry for several days between waterings... bright sunlight or light shade are recommended." The same goes for nobile. The best is to place the plants in bright conditions and do not water! only mist from time to time to keep the pseudobulbs from shriveling. The will produce buds from the nodes on the stems and only then can you give water in small quantities. Otherwise you risk getting only keikis (small plantlets) from the nodes. Lavzrak, Harris, Stocker : Dendrobium and its relatives, Timber Press.
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I want to study in vitro flowering in orchids. For that I want to know which is the best possible PGR combination
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Hi Paromik, we have not tried apple juice before and so we cannot give you any advice. The best way is still to use a defined medium formulation (with known cytokinins) to induce in vitro flowering such that your new method will be reproducible. If you cannot achieve in vitro flowering using defined medium for your particular Dendrobium species, this is where the young and green coconuts' water (undefined medium), will be great back-up plan. Alternatively, if you have the budget, you can measure the cytokinins, auxins and gibberellins (using either LCMS or ELISA) of 100 green coconuts, and then freeze these coconut water collected.
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I am following a research paper which is published from our research group.I am enclosing the paper with the question. I want improvise the data analysis part of the work which I intend to do. Apart from just assessing the somaclonal variations what additional approach can be incorporated? Any constructive suggestion is most welcome.
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ISSR analysis could be carried out together with RAPD marker to get clear genetic difference with in short time
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Where can I download the references related to the ethnobotany (local use, traditional medicinal use etc.) of Dendrobium helix? 
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Agus, here are our past journal articles about orchids (including Dendrobium) used in traditional medicine.
For this area of ethnobotany, it is better to refer to books.
There are great coverage of this area by Prof Joseph Arditti in his excellent book "Fundamentals of orchid biology", or his review series (Orchid biology: Reviews and Perspectives":
Good luck to your research. John (Singapore)
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I am searching for an epiphtic orchid named Dendrobium corymbosa.But I am not getting any deatails about I came to know from a researcher that the species name has been changed.Can anybody provide me the details of this plant?
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There is no listing for this species in Tropicos. There is a Coelogyne corymbosa but it is unlikely that it would be confused with a Dendrobium.