Science topic
Crustacea - Science topic
Crustaceans form a very large group of arthropods, usually treated as a subphylum, which includes such familiar animals as crabs, lobsters, crayfish, shrimp, krill and barnacles. The scientific study of crustaceans is known as carcinology (alternatively, malacostracology, crustaceology or crustalogy).
Questions related to Crustacea
Is this speciemen probably a barnacle? It has been seen with orbitolinids of Early Cretaceous.
Hellow , I need your help in detecting a universal primer for moleculer study of ostracod, who has information about it tell me please.
Hi,
I am looking for papers on electrical stunning in crustaceans where the pros and cons of dry versus wet stunning is discussed / described.
Thanks.
Hi everyone! I'm trying to identified this species, I think that belong to petruca panamensis but no so sure
Hello,
I am a graduate student researching the diet of Green-winged Teal in North Carolina. We collected gizzards from 51 hunter-harvested teal this past winter, and I have just finished analyzing the contents. The unknown food item in question has appeared in 43 of 51 gizzards (84%), and most gizzards only had 1-10 of them but one had upwards of 80 in a single gizzard. I'm not sure what they are-photos attached. They are tiny, 1-2mm in length, and resemble tiny claws or mandibles with serrations. They seem chitinous or sclerotized, which is maybe why they have resisted being crushed up by the gizzards and are more prevalent than other food items. I emailed an entomologist at my university who said they aren't mandibles, but might be part of a plant, or some invertebrate with only a few sclerotized parts. The teal were in coastal North Carolina, so they roosted overnight in coastal saltmarsh dominated by cordgrass, and then spent the day in freshwater flooded cornfields. I have a feeling that they could be some kind of micro-crustacean they consume while in the saltmarsh. If anyone could eliminate possibilities or provide some insight it would be greatly appreciated. Thank you!
-Cole Tiemann
i got this crustacean can anyone tell if its benthic isopod?
I'm asking this question to know if it is possible to rely on carapace shade/color in order to determine the animal's taxonomical group.
Thank you in advance for your answer.
I work on ostracod species that belong to order crustacia and phylum Arthropoda but I dont have enough key for this ,please who can help me
I am running this code (below) to add error bars onto my bar chart, i am trying to to work out the standard deviation (sd) of shannons diversity index
The code works up until the second/third last line
geom_errorbar(aes(ymin=shannon-sd, ymax=shannon+sd), width=0.2,
position=position_dodge(0.9))
This error code keeps coming up
"Error in shannon - sd : non-numeric argument to binary operator"
but this is my data...
Exposure genus shannon sd
Exposed Crustacean 0.000000 0.00000000
Exposed Mollusc 1.199625 0.13291129
Exposed Seaweed 1.513125 0.42093822
Sheltered Crustacean 0.025500 0.07212489
Sheltered Mollusc 1.156750 0.26763341
Sheltered Seaweed 1.848125 0.27264128
anyone know where im going wrong?
library(ggplot2)
#+++++++++++++++++++++++++
# Function to calculate the mean and the standard deviation
# for each group
#+++++++++++++++++++++++++
# data : a data frame
# varname : the name of a column containing the variable
#to be summariezed
# groupnames : vector of column names to be used as
# grouping variables
data_summary <- function(data, varname, groupnames){
require(plyr)
summary_func <- function(x, col){
c(mean = mean(x[[col]], na.rm=TRUE),
sd = sd(x[[col]], na.rm=TRUE))
}
data_sum<-ddply(data, groupnames, .fun=summary_func,
varname)
data_sum <- rename(data_sum, c("mean" = varname))
return(data_sum)
}
df3 <- data_summary(diversity, varname="shannon",
groupnames=c("Exposure", "genus"))
# Convert dose to a factor variable
df3$genus=as.factor(df3$genus)
head(df3)
p <- ggplot(diversity, aes(x=genus, y=shannon, fill = location)) +
geom_bar(stat="identity", width = 0.5, position=position_dodge()) + theme_minimal() +
geom_errorbar(aes(ymin=shannon-sd, ymax=shannon+sd), width=0.2,
position=position_dodge(0.9))
p + scale_fill_brewer(palette="Paired") + theme_minimal()
I'm doing a thesis that is related to sound production of crabs. Various crabs such as Ghost crabs and Dungeness crabs produce sound when they feel vulnerable. In my case, my thesis focuses on the mangrove crab Scylla Serrata. But due to travel restrictions due to Covid-19 situation I'm not able to perform my own experiments. I could not find any resources that were dedicated to sound production of Scylla Serrata. So, I wanted to know if Scylla Serrata produce sound when they feel vulnerable or before other crabs cannibalize them.
In the literature I found the following two interpretations:
- it is the maxillipedal exopod
- it is a specialized part of the maxillipedal epipod
So far, however, I found no real discussion giving arguments for one or the other. Is anyone aware of something like this?
I believe the class is crustacea but any help would be appreciated! This species was collected in Belize. Approximate size is 5mm
> Animals are kept in accordance with ABNT standards.
I would like to know the age of some Excirolana armata individuals sampled. Is there any bodily structure or anything like that which is indicative of age in this species or family?
I already published some works on predation by drills on ostracods, however I wonder if there are recent publications on the subject!
For part of my research I am attempting to assess the abundance and diversity of crustaceans in an aquatic habitat. I intend to take picture of the specimens once collected before they are preserved and lose their colour. I mainly wanted to know if there were any specific guideline to taking taxonomic photographs of shrimp e.g. how it should positioned/oriented, should the appendages be positioned in a specific way as well?
Dear colleagues!
Have you ever seen a program which is able to select the most suitable pairs of group-specific primers from a set (more than 5 pairs) of proposed ones?
Suppose in my lab I have several pairs of primers for different groups of organisms (polychaetes, fish, mollusks, echinoderms) and I want, instead of ordering new ones, to select from them those that are absolutely accidentally found to be specific to... crustaceans.
In other words, a bulk search among available primers that have never been tested for specificity to a particular group.
Chordotonal organs are found in insects and crustaceans but do they also occur in mites. Specifically in Phytoseiidae.
My question is in relation to new trace fossils from Pleistocene-Holocene marino-marginal depositional environments with records of molluskan and crustacean burrows. In these outcrops the friable sediment, already partially cracked, makes impracticable the collection of most specimens, if any. However, the morphological details are faithful when compared with modern analogous or the same producer of these traces and their ichnotaxonomic importance is high. What are possible solutions to this issue?
Two weeks ago I found a peculiar crab in the intertidal zone in SW Florida. when found, the crab was not utilizing a shell. It was similar shaped to porcelain crabs found in our area, but with smaller claws (red tipped) and the 5th perepod was flipped up on the dorsal size of the carapace. The eyes were also uniquely positioned on the ventral side of the animal. Upon collection, the crab was observed carrying a cockle shell half. It fit particularly snug in this shell, which leads me to believe this is a commonly used shell for this species. Any assistance on identification and/or resources would be appreciated.
these crustacean found in a gut content of Ostorinchus margaritophorus (Apogonidae)
I'm PhD graduated in fisheries. Have some experiences in crustaceans propagation, trout egg hatchery, larval rearing in RAS system, aquaculture in the floating HDPE cages in Caspian Sea and etc.
You can find my curriculum vitae in the attachment. All my fisheries research and activities are mentioned there, in brief.
We found this small, maybe parasitic, crustacean in the North Sea offshore. The posterior body part is missing, but it looks quite characteristic. There is double-hooked rostrum, 2 antennae (second pair broken off), 2 small eyes on each side of head, no coxal plates, and maybe a sucker-like structure near mouthparts.
Stained with Shirlastain A.
We don't have any clue to which higher group it belongs, and would be happy if anyone can give a hint.
I am trying to ID fairy shrimp but am unable to find any lists or keys to use.
Can anyone identify this species? It's from a temperate lagoon located in the southern part of the Po River delta (Italy).
Many thanks,
Monia
In looking for a different treatment for small crustaceans that parasites sharks and rays
I need to differentiate living veligers from dead. Is there some staining or another method?
Thank you for your help in advance
MAria
Hi all, I will appreciate if you could direct me to a paper where I can find the stomach pH in crustaceans. I am sure it will vary between species, yet any data will be useful and much appreciated.
Thanks
Hello, I am a PhD student interested in population genetics of marine invertebrates. Currently I'm working with a bryozoan: Reteporella.
I have been trying to amplify COI (at least) and, although I finally got some bands, after Sanger sequencing, they turned out to be of bacteria, protists, or crustacea (parasits). I'm working with recent samples (collected between 2018-2019), and also some from 2010 (even got bands in these ones, but no sequence). I have been following the conditions suggested in papers dealing with Reteporella and other bryoans, using Platinum Taq (Thermo Fisher) ou Multiplex PCR Master Mix (Qiagen):
- Folmer's LCO1490/HCO2198 universal primers
- 94ºC 3 min; 40x(94ºC 30s, 45ºC 30s, 72ºC 1min); 72ºC 10min
- 95ºC 5 min, 35x(95ºC 40s, 45ºC 45s, 72ºC 1min); 72ºC 8min
I'm aware these temperatures are quite low and prone to amplify inespecific targets. I'll try a gradient PCR 45-55ºC and a touchdown between the same temperatures.Can someone help me, any tips to help me get specific sequences of Reteporella?
Samples were extracted with PureLink extraction kit (Invitrogen), reccomended for "difficult-samples) after completely crushing the sample with a stainless steel pestle (which is passed on ethanol and fire between samples). Only samples that looked "clean" on the surface with polyps at sight (ensuring they were alive when collected) were extracted.
Thanks in advance!
*Attached are eletrophoreses of the PCRs that worked with annealing temperature of 45ºC using the MM Qiagen or Platinum.
Micro-Computed tomography (micro-CT or μCT) is a microstructural, non-destructive study technique that allows you to study the internal and external anatomy of biological samples, and perform their reconstruction through a virtual three-dimensional model.
he possibility for combining μCT with other techniques is one of the major advantages of μCT scanning, and the technical development of higher resolutions in lab-based μCT-scanners allows for investigating the anatomy of specimens in the sub-milimeter range See:
Krieger, J., & Spitzner, F. (2020). X-Ray Microscopy of the Larval Crustacean Brain. In Brain Development (pp. 253-270). Humana, New York, NY.
and:
KHAN, M., WHITTINGTON, C., THOMPSON, M., & BYRNE, M. (2019). Arrangement and size variation of intra-gonadal offspring in a viviparous asterinid sea star. Zoosymposia, 15(1), 71-82.
This technique would allow us to explore how different structures develop in species that develop their life cycles in different areas with different characteristics and find a relationship between them.
For a long time we are looking for the fossil cladocerans (Crustacea: Branchiopoda: Cladocera). Many papers were published previously by my team. But now we are looking for the next fossils, i.e. in Mesozoic rocks, any amber pieces etc. Did you see them?
Im currently working on gut content analysis of some juveniles from seagrass bed in Seribu Archipelago, Indonesia. I found some difficulties as most diets were found in not complete part and perhaps broken. Thank you
In transcriptomic analysis of crayfish infected by a pathogen ( oomycete), we found in hemolymph, chitinases and Lpmos... is it a general defence mechanism? thank for your help
I'm using Chitosan flakes, obtained from crustaceans. In my application, I put the chitosan flakes with caustic soda so that the pH is over 13. Now my question... Does the high pH not lead to additional deacetylation? However, IR measurements on different deacetylated chitosans have shown that there are no significant differences via pH treatment. The high pH does not lead to further deacetylation. Why is that? Why is virtually no 100% deacetylation possible?
Dear Colleagues, we would be most grateful if you could complete this very short survey on Endocrine Disrupting Chemicals (EDCs). This survey is intended to inform the wider scientific community about the progress and impediments to endocrine disrupter research in invertebrates. We welcome views from those working outside invertebrate toxicology
Please follow this link https://forms.gle/tZAbHnhn6fArnAZR8
By participating you will be giving consent to your anonymous data entries being used as part of the survey. Due to the anonymous nature of this survey participation can't be removed. For further details on this project and how the data will be used please feel free to contact alex.ford(@)port.ac.uk [Please remove the () around the @]
I would like to know which DNA extraction kit would work best for extracting bacterial DNA from animal tissue, specifically the pleopods of a crustacean. Some people have mentioned the DNeasy blood and tissue kit has worked for them, while others have suggested the power soil kit. I understand a kit with beads to aid in bacterial cell lysis is preferable, but any advice would be appreciated.
Hi. I would like to ask you.
We typically fix fish tissue with 4% PFA and 30% sugar for FISH or IHC.
Recently, however, the failure of frozen section for FISH or IHC using shrimp, a crustacean, has been continuing.
Does shrimp have to be fixed in other ways?
Currently working on marine macro-invertebrates (especially molluscs, echinoderms and crustaceans) from gleaners' catch for my thesis and need help in taxonomic identification and confirmation. Thank you.
Dear all,
We’re currently extracting total RNA from gammaridean amphipods (Gammarus pulex). Animals were freshly collected, directly frozen at -80°C.
Trying different RNA extraction protocols (Qiagen, Trizol+Qiagen) we always end up seeing no obvious 28S band. First we thought it is due to the denaturing step prior to loading onto the Fragment Analyzer (known issue). But omitting this heat denaturing step does not lead to a change - the picture remains (see attachment for examples). Any ideas? We also gave the samples to a different lab - extraction results the same. There seem to be sometimes two only marginally different peaks at the 18S band position and we suspect that something other than heat is leading to the dissociation of the two 28S subunits possible. If these are of same lengths as the shorter 18S fragment can this explain the pattern… So non-model organisms experts: Can someone help us with this puzzle?
Best Florian and Team
Hi!
I am preparing ostracods for identification and I need to open the valves. Is there a best way of doing it?
My scientific advisor (Burukovsky R.N.) is a famous shrimp researcher and carcinologist. He analyzes food from stomachs of many crustaceans. So... it is an obvious situation when he found an interesting unidentified object inside. Somebody can help us and tell something about what is it? Small bonus below: the book about shrimp feeding in Russian. See foto too. Size of object 0,5-1,5 mm. My E-mail: echo_tc2@rambler.ru
His E-mail: burukovsky@klgtu.ru
I'm trying to extract the RNA from the shrimp optical ganglion.
Hey everyone,
I was wondering if anyone has tested/published some crustacean focussed 18S primers that provide an amplicon size of around 1kb to use for phylogenetics?
Many thanks!
Hi,
I am working on the screening of Crustacean Viruses. Meanwhile, when I screened my samples for IHHNV (amplicon size 309bp) my positive control is not working. I am getting multiple bands just below the well (gel image attached, last lane is the positive control).
Can anyone please suggest, why is it happening so?
I have carefully done conducted the experiment and repeated too, but still the problem is the same.
Please help me out in solving these issues.
At low salinity (below 4 ppt), the proportion of major minerals (Cl, Na, SO4, Mg, Ca, K) is important as well as the absolute concentration for the growth and survival of marine shrimps. Does anyone know this statement still works in brackish water (10-25 ppt)? And what mineral is the most important?
Dear all,
I have gathered samples of Dreissenid mussels at different locations in a lake. After counting and measuring the mussels, histograms featuring the number of individuals per shell length ranging from ≤0.4cm to 3.5cm have been created, most of which are showing multimodal distributions but some are unimodal, too.
What is being tried to do, apart from visually determining the size-frequency distributions, is to apply a statistical mathematical tool in R that goes through all of these data and attempts to classify recurring groups that then ideally represent age-groups (cohorts, populations) of the mussels.
It seems like packages in R that might be helpful are 'mclust' and 'Rmixmod' both of which have already been tried. However, in the end, always a dead-end has been reached so it got me wondering whether the arrangement of my data may be the problem or there is another underlying cause.
Has anyone already encountered and maybe solved equal problems and might possibly be up to having a look into the organisation of my size-frequency data?
Similar methods to what I am trying to do have been exercised for example in:
Comtet, Desbruyeres (1998) Population structure and recruitment in mytilid bivalves from the Lucky Strike and Menez Gwen hydrothermal vent fields (37'17'N and 37"501N on the Mid-Atlantic Ridge)
and
Taylor et al (2009) Using length-frequency data to elucidate the population dynamics of Argulus foliaceus (Crustacea: Branchiura)
Thanks to everyone wanting to help!
Benjamin Wegner
I want to extract chitosan from crustaceans such as shrimps and lobsters. How would this be possible in the simplest way?
The aims is for detect the hormone profiles in crustacean's hemolymph. Therefore, before proceed with the GC-MS procedures, the hemolymph need to be dissolve with derivatives. Does anyone can help me to identify the suitable derivatives? Based on my experience with ELISA, methanol and ethyl ether can become the derivates. But I am not sure the suitable derivatives for detecting hormone profiles by using GC-MS procedures. Thank you.
is anybody familiar with species identification of Euphausiidae shrimps, also known as krill? A co-worker (W. Langbroek) collected a specimen in a shallow marine bay along our Dutch coast at Katwijk (52°12'39.74"N , 4°24'0.41"E on 24.iii.2018) and I only have the key by Mauchline (1984). In The Netherland, 2 species have ever been reported i.e. Meganyctiphanes norvegica and Nyctiphanes couchi. My specimen is a bit small (about 9 mm) so perhaps not all features characteristic for those species are fully developed. As lateral denticles are missing it seems no M. norvegica, but also a comb-like structure on antenna 2 is missing characteristic for N.couchi. However, I think that it may still be a juvenile specimen of the latter for it has 7 pairs of legs with the last one very much reduced, eyes are undivided, no lateral denticles on the carapax and with reflected lappet on the first antennal segment. Do you agree? Or do you have another suggestion? Are there any other keys for Euphausiid crustaceans which can be used for the NE-Atlantic?
many thanks in advance
Ton
I have seen ectocommensal triclads and their egg cases in Antarctic isopods (undescribed to the best of my knowledge), Bdelloura species in horseshoe crabs.. I wonder if there are potentially triclads in other crustacean species?
Hi Everybody,
I need ideas on methods which could be used to mark small shrimp (approximately 3 cm total length) for the purposes of identification of individuals in a lab-based study. It doesn't need to be easily discernible on a camera, but it does need to be easily discernible if the shrimp were to be captured out of its tank with a net and examined. I was going to use nail polish, but now I've read that it takes a very long time to dry. The less invasive the method of marking, the better, and the simpler and cheaper the method of marking, the better. Thanks in advance.
In fact, I'm looking for a way to maintain a good survival an growth of these shrimps, especially at early life stages (I've heard about some ion deficiencies in marine sea salt which lead to a higher mortality of larvae or juveniles).
Have you any advices concerning the salt quality?
Thanks in advance!
This relationship is very obvious to me (think of lobsters), but hard to actually measure. I could not find any study which addresses this issue!
In decapod crustaceans, spermatophores studied to date have been categorized into three different types. One type of spermatophore is pedunculate and is present in all anomurans except for a few species in Hippidae (Greenwood, 1972; Trelli et al., 2007; Tudge, 1999; Scelzo et al., 2004). Another type of spermatophore is tubular and has several layers made of acellular material and they are found in the form of an interrupted column as in A. leptodactylus, Pacifastacus leniusculus, Homarus americanus, Enoplometopus occidentalis (J. W. Randall, 1840) and Panulirus homarus (Kooda-Cisco and Talbot, 1982; Haley, 1984; Mann, 1984; Radha and Subramoniam, 1985) or units pinched off the column (Dudenhausen and Talbot, 1983). The third type of spermatophore is the simplest form of spermatophore and is found in brachyuran crabs. They are small and either ellipsoid or spherical. This type might form the sperm plug in the seminal receptacle of the female that prevents other male sperm from getting into the female reproductive tract (Cronin, 1947; Ryan, 1967; Hinsch and Walker, 1974; Krol et al., 1992).
I'm finishing an article of my research, which consists in managing some crustacean species names, but some of them went through taxonomic changes, specially genus level changes. One example is Palaemonetes pugio that was changed for Palaemon pugio, meaning a genus change and therefore a comb. nov. (or combination nova). But my problem relies on how to cite the authority of the species. the former name and authority goes like this: Palaemonetes pugio Holthuis, 1949... but now is Palaemon pugio and the reappraisal was made by De Grave and Ashelby (2013). In my paper I wrote: Palaemon pugio De Grave and Ashelby (2013) but one of my reviewers said that this is incorrect and wrote Palaemon pugio Holthuis, 1949, which means to maintain the current accepted name but the author of the original and former name. So I don't know exactly what to do... if anybody has had the same issue please help.
Thank you very much.
I'm searching for some resource (book or paper or database) with more or less complete list of common marine zooplankton species (e.g. crustaceans) with body lengths or better body masses. There are many publications in this direction, but rarely raw data is presented. I would appreciate any advise.
Permian system, Sakmarian stage. Russia, the Urals. Carapace
Phyllocaridan? Another Malacostraca?
Dose anybody have some photos from below crab species? I could not find.
Potamon gedrosianum
Potamon magnum
Potamon mesopotamicum
Potamon ruttneri
Potamon strouhali
Potamon transcaspicum
Potamon bilobatum
Potamon ibericum
- Best quality and reliable ELISA kits.
- Journal / Article references used for crustacean allergen quantification.
- If possible approximate price/ cost of that ELISA kit.
Recent discover of trilobite eggs has me wondering whether all or some trilobite species were single-birthers like some arachnids, crustaceans, and other plants and animals, albeit very limited. Wondering whether phylogenetic analysis would be a starting point to support or refute the question.
Hello,
I have been passed this photo of a small crustacean (Malacostraca?) eating planted mangrove seedlings (Rhizophora) in central coastal Vietnam. They are girdling the seedlings, which then fail.
My knowledge does seem to be limited to: oh, looks like a sea louse (!), so I am asking the question.
The situation is somewhat brackish evidently, due to fluvial influence at that part of the estuary, and there is no herbivory in more saline water plantings.
The picture isn't great, but hopefully enough. I do not expect there are easy solutions to the pest problem in mass reforestation efforts!
(Planted seedlings do seem to be generally more susceptible to herbivory and I do think, without visiting the site, that the mangrove species selection may be wrong here, but that is another topic!).
Can you help to identify this crustacea?
Obtained from the Persian Gulf
Almost less than 20 mm size