Science topic

Chemoresistance - Science topic

Explore the latest questions and answers in Chemoresistance, and find Chemoresistance experts.
Questions related to Chemoresistance
  • asked a question related to Chemoresistance
Question
7 answers
Currently, I am looking for a solution to develop chemotherapeutic drug resistance in a primary cancer cell line. But after a quick look at the literature, it is indicated that the management of acquirement of drug resistance takes plenty of time, more than eight months! Is there any convenient method to subculture chemoresistant cell lines in a short time? Or any other suggestions rather than eight months interval with an increasing dose of chemotherapeutic agent?
Best regards.
Relevant answer
Answer
Hi..Rather than establishing the resistance cell line,I've found some published articles compared the resistance of various cell lines (from the same cancer type) following drug treatment. Cells with greater survival rate following drug treatment were selected as a resistance model
  • asked a question related to Chemoresistance
Question
1 answer
Dear scientists, clinicians, and researchers on the ResearchGate platform,
I am planning to assess the molecular mechanisms of developing drug resistance in cancer cells. However, I lack knowledge regarding the bystander effect. Can you kindly assist me with the following questions:
1. What is the fundamental understanding of the bystander effect in the development of drug resistance in cells?
2. Why is it important to measure gene mutations that cause drug resistance, whether through direct or bystander effects?
3. What is the most effective in vitro setting to demonstrate this bystander effect and resistance development?
4. How can we measure the direct and bystander effects of gene mutations causing chemotherapy resistance in cancer cell lines? What parameters should we assess?
5. Lastly, what are the clinical implications of measuring this bystander effect?
Thank you very much for your assistance.
Relevant answer
Answer
What is the fundamental understanding of the bystander effect in the development of drug resistance in cells?
The bystander effect refers to the phenomenon where cells that are not directly exposed to a drug can still develop resistance to it. This effect can occur through several mechanisms, including:
1. Secretion of signaling molecules: Cells that are directly exposed to a drug can secrete signaling molecules that can affect neighboring cells. These signaling molecules can induce changes in gene expression and cellular pathways that result in drug resistance.
2. Transfer of genetic material: Cells that are directly exposed to a drug can release small vesicles, such as exosomes or microvesicles, that contain genetic material such as RNA or DNA. These vesicles can be taken up by neighboring cells, resulting in the transfer of genetic material and the development of drug resistance.
3. Altered microenvironment: Cells that are directly exposed to a drug can change the microenvironment around them, leading to the development of drug resistance in neighboring cells. For example, the secretion of extracellular matrix proteins or cytokines can create a protective environment that shields cells from the effects of drugs.
The bystander effect can contribute to the development of drug resistance in cancer cells, where a small population of drug-resistant cells can emerge and propagate in the tumor microenvironment. This phenomenon can lead to the failure of chemotherapy and the recurrence of cancer.
Understanding the mechanisms underlying the bystander effect can help in the development of new therapeutic strategies that can overcome drug resistance. For example, targeting the signaling pathways or genetic material transfer mechanisms that mediate the bystander effect can prevent the development of drug resistance and improve the efficacy of chemotherapy.
  • asked a question related to Chemoresistance
Question
3 answers
I work on VEGFA / VEGFR-2 cytokine/receptor in AML and I will inhibit it to see if the signaling pathway has a role or not in AML chemoresistence
I will test the inhibition by detection of phosphorylation, but there are a lot of phosphorylation sites, how can I choose the accurate site for my experiment
Thanks
Relevant answer
Answer
Thank you very much for the link, it is very interesting. I've now been retired for a few years but still follow areas I once worked in, and even occasionally still publish.
Good luck with your research.
Phil.
  • asked a question related to Chemoresistance
Question
7 answers
TGF-β and BMP signaling are present in the cancerous cell show almost the same function of chemoresistivity, enhanced proliferation, higher EMT transition. Then why would cells have both mechanisms? Also, what is the major difference between both of them?
Relevant answer
Answer
On Quanta Magazine an article on BMP appeared recently.
Regards,
Joachim
  • asked a question related to Chemoresistance
Question
1 answer
Hi, I am designing my proposal on gene which cause chemoresistance in cancer. From literature review I have come up with a gene COL11A1 which has previously been identified as a chemoresistance biomarker. I want to know that what if I do not receive any positive result of staining then what measure will I do to atleast get guarantee that something to work on?
Relevant answer
Answer
If you have tried both IF or IHC staining without positive signals, your antibody may be not good enough or there is no expression of your interested gene. You can take some positive samples as control to make sure your protocols.
  • asked a question related to Chemoresistance
Question
4 answers
Hi , I want to know that if I hypothesize that Gene A promoting chemoresistance in PDAC but what to do if I do not get any positive staining in my sample? What measure will I have to take which will guarantee me to get atleast something to work on?
Relevant answer
Answer
First of all, as you said it is your "hypothesis" which itself means it is subject to experimentation and if not found to be yielding results, then the idea is simply to be discarded. You cannot force your hypothesis. However before discarding the idea altogether, you should explore from all angles. Since I do not know what experiments you have done to check this, I would suggest some which might help you.
  1. Chemoresistance in culture. Grow your cells in culture, administer drugs which are commonly used for chemotherapy in different dosages. Check whether it is actually affecting the cell viability, proliferation and invasiveness.
  2. If a particular dosage is found to induce chemoresistance in vitro, examine the expression of your gene A at DNA, RNA and protein level in those cultured cells selectively.
  3. If you are doing this using samples from patients showing chemoresistance, examine the expression of your gene A at DNA, RNA and protein level again.
If you still do not see any expression in all the above cases of your gene A, then you may try the following experiments:
  1. In a cell line which mimics/ originates from the tissue of your interest, overexpress your gene A or knockout/ knockdown your gene A and see whether it is inducing chemoresistance
  2. See the expression of other genes/ proteins/ miRNAs which might modulate the expression of your gene A
  3. You may also see the levels of immune and other chemokine regulators which might affect the expression of your gene A.
I do not exactly know your setup, but I am sure any of these would help you. If not, you may share your experimental plan, so that we could think of other ways. All the best!
  • asked a question related to Chemoresistance
Question
2 answers
Hi,
I have analyzed 20 clinical samples, 10 which are chemosensitive and 10 which are chemoresistant, using TMT labelling and high-resolution mass spectrometry. I am really stuck at how to analyse the results. I've used MaxQuant and am hoping to use Perseus to interpret the data but I'm not sure how to do this. There are many missing values, can I impute data even with no replicates? Do I have to normalize my data? Any links to guides or help would be greatly appreciated! Thank you!
Relevant answer
Answer
Hi Katie,
You'll find in the links below an article that demonstrates the analysis of proteomics data using the Perseus software platform.
Hope this may help you.
  • asked a question related to Chemoresistance
Question
5 answers
In collaboration with Frontiers in Oncology (latest Clarivate Analytics' impact factor: 4.416), "Cancer Metabolism" section, and together with Professors Athanassios Vassilopoulos and Lucia Altucci, we are bringing together a selected group of international experts to contribute to an open-access article collection titled "Sirtuinome Rewiring to Hijack Cancer Cell Behavior and Hamper Resistance to Anticancer Intervention". Frontiers provides a free and immediate Gold Open Access-based online access to the scholarly literature for anyone in the world to read, distribute and reuse. In this regard, we are pleased to inform that a 25% discount will be granted for accepted manuscripts. For more detailed informations, please go to https://www.frontiersin.org/research-topics/10447, and remember that submission deadline is November 2nd, 2019. ------------------------------------------------------------------------------------------------------------- Call for Papers Extensive reprogramming of energy metabolism and detoxification processes are increasingly seen as critical factors involved in metastatic progression and in development of chemo- and radio-resistance. Mammal sirtuins (SIRT1-7) are a family of conserved NAD+-dependent protein deac(et)ylases and/or mono-[ADP-ribosyl]transferases with varied cellular distribution. Their role as crucial regulators in energy metabolism and adaptation to cellular stress is currently under extensive investigation worldwide, not only in physiological processes (e.g. in aging) but also in the pathogenesis of cardiovascular and neurodegenerative diseases, diabetes and cancer. In particular, sirtuin-dependent signaling is suspected to play a dual role in cell biology, on one hand protecting DNA from genomic instability and limiting the replicative potential, on the other hand inhibiting senescence and promoting survival and growth advantage. Interestingly, SIRT3-5 localize to mitochondria and regulate targets involved in a diverse array of biomolecular pathways, many of which govern energy metabolism and apoptotic death. Such characteristics confer a great importance to sirtuins, in terms of preventive medicine and therapeutic potential. Unfortunately, despite the rapidly increasing interest in the field, results are still insufficient to draw definitive conclusions. More importantly, the question as to whether sirtuins can be considered as tumor suppressors or oncogenic proteins remains unanswered. In this Research Topic we welcome Original Research and Review articles focused on clarifying the mechanisms underlying sirtuin-driven responses to endogenous and exogenous stressors in tumor and malignant cells, in terms of metabolic rewiring, antioxidant protection and cell cycle control. In addition, researchers are also invited to provide data and opinion regarding strategies aimed at controlling the expression and activity of sirtuin-responsive cellular systems, with particular attention to pharmacological and nutraceutical approaches. Finally, studies focused on sirtuin-dependent pathways leading to malignant progression and/or development of chemo- and radio-resistance in cancer cells are also welcome. Potential topics include but are not strictly limited to the following: 1) In vitro or in vivo studies focused on sirtuin-dependent regulation of redox-based responses to stressors in tumor and malignant cells, with particular attention to metabolic reprogramming, DNA damage repairing capacity, antioxidative potential, and proliferation; 2) In vitro or in vivo researches on the mechanisms underlying the action of synthetic and natural compounds on the expression and activity of sirtuins and downstream cellular pathways in tumor and malignant cells; 3) In vitro or in vivo studies investigating the role of sirtuin-dependent intracellular and extracellular signaling associated with cancer progression and/or development of resistance towards chemo- and/or radio-therapies. Stefano Falone, Ph.D. (Department of Clinical Medicine, Public Health, Life Sciences and Environment Sciences, University of L'Aquila, L’Aquila, Italy) Athanassios Vassilopoulos, Ph.D. (Northwestern University, Chicago, IL, USA) Lucia Altucci, Ph.D. (University "Luigi Vanvitelli", Naples, Italy) Topic Editors, Cancer Metabolism Section, Frontiers in Oncology
Relevant answer
Answer
So, if there is a rescue, it may be challenging to characterize.
  • asked a question related to Chemoresistance
Question
4 answers
Hi all, I was wondering how to go about obtaining highthroughput seq data from databanks. We are interested in the expression of a few genes we believe might regulate acquired chemoresistance. I'm not quite sure where to start. I have searched TCGA and NCI's GDC data portal but I was wondering if there are other databanks I could request information from. What about tissue samples? Our group would like to work with patient samples and data to validate a few findings and aren't quite sure where to start. Any help would be greatly appreciated.
Relevant answer
Answer
Have you tried COSMIC and then if you google it down, you may find others but then there are some local and specific sites which can help. However, it all depends upon the data type and the rules of the site you select. But getting the sequenced data for resistant cancer is definitely possible.
Regards
  • asked a question related to Chemoresistance
Question
3 answers
I am working on chemoresistance of  human squamous cell carcinoma (SCC12) in the context of tumor microenvrionment, CAFs specifically. 
I have already done experiments with different concentrations of each drug (cisplatin, docetaxel and 5-FU) ranging from 0-120uM for cisplatin, 0-100uM for docetaxel and 0-500uM for 5-FU. 
I am wondering does anybody have experience with these drugs to tell me what are the physiological concentrations in patients? I have checked for concentration in plasma but I could not find a consistent answer.
I would like my results to reflect the conditions in patients.
Thank You!   
Relevant answer
Answer
I f you need plasma level required for treatment, please have a look of this interesting paper.
It shown minimum effective conc. as well as minimum toxic concentration of Cisplatin and Fluorouracil. 
  • asked a question related to Chemoresistance
Question
2 answers
Hello everybody,
CHEK2-related breast cancers are very chemoresistant. Can somebody explain me, why they are so chemoresistant? Anthracyclines are not working here compared to BRCA1-carriers. 
best wishes,
Werner
Relevant answer
Answer
thank you very much for your help.
My question is, is there a connection, for example, to the decreased kinase activity of CHEK2? What is happening on the cellular level? 
What would be your answer, if somebody would ask you, why CHEK2-associated tumors are so resistant to chemotherapy?
  • asked a question related to Chemoresistance
Question
4 answers
In many cancer, ALDH1A1 found to be associated with chemoresistance. Does anyone has comprehensive understanding on the molecular mechanism of ALDH1A1 mediated chemoresistance? I just found an article showing ABCB1 modulation through ALDH1A1-NEK2 pathway. Are there any more gene/protein that directly linked with ABC transporters as well as ALDH1A1? Any suggestion will be appreciable. 
Relevant answer
Answer
There are three isoforms of aldehyde dehydrogenases (ALDH), one of which is highly expressed in cancer stem cells (CSCs). That is why Aldefluor assay is useful to purify the CSC population especially in CD44(high)/CD24(low) fraction. ALDH is expressed in the normal liver and responsible for the oxidation of aldehydes to carboxylic acids. This anti-toxic effect reflects the capacity of the resistance to cytotoxic anti-cancer drugs.
  • asked a question related to Chemoresistance
Question
2 answers
This is a question that will be raised by most oncologists. The corollary of this question is: Will this method raise glutathione in cancer cells as well, leading to their chemoresistance to chemotherapy? The literature suggests that when using actual glutathione precursors (like  available cysteine/cystine) will lead to what has been termed "selective modulation" of glutathione. This is a situation where cancer cells down-regulate GSH (negative feedback inhibition) but healthy cells increase their GSH levels. This has the potential of potentiating the effect of the chemo on tumor calls while decreasing chemotherapy side-effects. See http://www.ncbi.nlm.nih.gov/pubmed/18158761
Relevant answer
Answer
Sorry, to complete my thoughts about the statement above - it may be interesting to do a follow-up study using this methodology and do separate thiol measurements in a) plasma, b) lymphocytes, and c) cancer tissue in the animals. There are several models of tumor-bearing rodents that could be used.
  • asked a question related to Chemoresistance
Question
4 answers
I would like to use a comet assay to test the effect of my protein-of-interest on DNA damage response, double strand breaks and chemoresistance in cancer cells.
There are several types of comet assays. Which type is most suitable for my analysis. Any why?
Relevant answer
Answer
You can also check the method in this paper: Oncotarget. 2014 Jan 30;5(2):351-62. ERG induces a mesenchymal-like state associated with chemoresistance in leukemia cells. Mochmann LH1, Neumann M, von der Heide EK, Nowak V, Kühl AA, Ortiz-Tanchez J, Bock J, Hofmann WK, Baldus CD.