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Bladder Cancer - Science topic

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I am looking for journal suggestions for a manuscript submission of a novel Bladder cancer study in Bangladesh. The study contains Whole-exome sequencing data analysis and establishment of a somatic mutational landscape of 4 (four) bladder cancer patients. Data analysis includes uses of offline bioinformatics and NGS data analysis tools on Linux and the R Studio.
Please suggest some journals that might welcome studies with such low sample number. Thanks in advance.
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There are lots of different for different types of tumours. This one seems to fit you very well. It is actually called: "Bladder Cancer".
There are some others that are about Oncology in general. I might also consider:
- Tumor
- Journal of Oncological Science
- Cancer Forum
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Hi all. I would appreciate any help regarding this. I am trying to grow patient derived primary bladder cancer cells from surgical samples using mechanical and enzymatic digestion approach. Initially cells were growing well but after few days, it seems the cells go into senescence stage. I have attached the corresponding images of the cells after 21 days. Any suggestions/comments on this would be very helpful.
Currently I am using DMEM(high glucose)-F12 media with 3% FBS + EGF-insulin- Cholera toxin-hydrocortisone as supplements.
Thanks and regards
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Hi, Sumit
Even cancer cells are not easily immortalized, especially human-derived cells.
From the attached photo, it seems that the stress caused by the subculturing induced cellular senescence.
In general, if you try to establish a cell line from about 10 cancer tissues, a few will probably be established as continuously culturable cell lines.
In order to establish cell lines more efficiently, immortalizing genes such as TERT, c-Myc, SV40T, HPVE6E7, etc. are often introduced. Of course, this may alter the properties of the cell line.
Perhaps using a hypoxic incubator to reduce oxidative stress may also be useful in extending cell life.
Best,
Best, Narumi
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Deep resection for correct histopathological analysis in TUR-B can be challenging for the surgeon with a low to mid-experience level. This leads to inadequate analysis, possibly postponing radical cystectomy.
How do you do it? Do you only rely on what you see?
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Most of the time, it is possible to know if muscle has been included in the specimen from visual inspection and chip thickness. If doubt remains, it is prudent to take biopsies from the floor with cold-cup forceps.
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Obturator reflex or adductor spasm can cause bladder perforation leading to morbidity in the post operative period especially if the tumor is located at the lateral wall of urinary bladder as the nerve traverses near to it.
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We use either GA with muscle relaxants or just spinal anaesthesia
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If you are interested in the latest assessment of possible risks, if any, see this just published article. National Trends of Bladder Cancer and Trihalomethanes in Drinking Water: A Review and Multicountry Ecological Study. Joseph A. Cotruvo and Heather Amato. Dose-Response Journal. https://doi.org/10.1177/1559325818807781 January, 2019.
Interested in your comments.
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Congratulations Prof. you are doing a very great job. All the best!
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I'm interested in culturing bladder cancer spheroids in matrigel, and I'm not sure about which conditions would be more appropriate (medium and growth factors). I've found oine paper (Lee et al, Cell 2018) where they use hepatocyte medium and EGF, and another one (Mullenders, PNAS 2019) where they add FGF10, FGF7 and FGF2 to DMEM/F12. I'd appreciate any suggestions, thanks!
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Which cell line? You can see my papers for various conditions.
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When performing a systematic review with meta-analysis on HR-QoL, I think it is better to pool comparative studies using the same HR-QoL instrument rather than a combination of studies with different instruments which may be confusing.
Example: a meta-analysis should not combine comparative studies using Bladder Cancer Index and others using FACT VCI. The measurement tool should be unique.
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Hi Amad,
I absolutely agree with your statement. It would not be meaningful to pool estimates from different tools of measurement, even if they measure the same parameter. For such cases, best solution would be to stratify the meta-analysis based on the specific tool, and report the results distinctly for each tool included.
Regards,
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I once had a colleague in a university, he was a professor of postgrad studies. About three years ago he suffered a bladder cancer, see for example: http://www.cancer.org/cancer/bladdercancer/. Then he took a surgery abroad, but it seemed that the cancer was spreading. So he decided to take herbal remedies besides taking chemotherapy.
I am not sure what happened then, except the fact that two years ago he passed away. I dont know exactly if his condition worsened because of cancer grew or not. But this story makes me ask about the safety and effectiveness of herbal remedies. Some people think that herbal remedies have better credibility over other alternative medicines.
So do you agree that herbal remedies are safe for cancer treatment? Do you have experience. Thank you.
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Kindly see the following PDF attachments.
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I recently saw a 67 year-old female patient who developed polymyalgia rheumatica two months after the sixth intravesical instillation of BCG.
Symptoms dramatically improved once treatment with 6-MP (16 mg/day) was started. So far, only one case has been reported in the Literature
Has anyone had experience with a similar case? Can anyone contribute for a case-series?
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Dear Gian Luca,
in our casuitry we have two patients with the characteristics you required, and a very long follow-up ( 12 and 16 years).
I am happy to collaborate for case-series.
Awaiting for your news,
Best regards.
Ciro
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Radical cystectomy (rCx) for MIBC is the only curative therapeutic option.
Standardized preoperative protocols such as ERAS help shorten recovery time and reduce postoperative complication rates.
But is there something missing? Can we do something different or even better?
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What is the threshold at which you define a hospital as "high volume" for a certain procedure? Is the relationship linear? Two of our published papers show that the relationship is not linear, and there is a plateauing at a certain point where the effect of increasing hospital volume does not lead to incremental decrease in complications. A difference between a hospital volume of 20 and 40 cases an year is not the same as a difference between 40 and 60 cases.
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In literature there are different methods to detect hpv on bladder tumour studies. Frozen sections, direct tumour tissue, urine, cytology. Using PCR assay I'm planning a study on bladder tumour & hpv. Which sampling method do you recommend?
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actually I wanted to study on fresh samples. So urethral swab and first void samples I collected.
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I want to compare 4 different methods of bladder cancer induction and I have to calculate sample size. How many animals I have to used to get appropriate statistical power?
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It is difficult to tell. You need to know the variability in the response to the drug. I would suggest to perform some tests initially to urothelial cell cultures prior to animals.
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Do you think that a Side-effect questionnaire - Intravesical instillation of Bacillus Calmette-Guèrin (BCG) for nonmuscle invasive bladder cancer’ improves the recognition and reporting of potential side effects of BCG treatment by patients?
Dear all,
My name is Ana Filipa Semedo, I am doing the Master in Leadership in Cancer, End life and Palliative Care in Southampton University specific Dissertation(MSc) module.
I am a Clinical Nurse Specialist Urological - Oncology in the United Kingdom in Royal Marsden Hospital (Oncology Hospital) in London.    
My thesis question is: "Simplified terminology of the EAUN (European Association of Urology Nurses) Side-effect questionnaire - Intravesical instillation of Bacillus Calmette-Guèrin (BCG) for nonmuscle invasive bladder cancer’ improves the recognition and reporting of potential side effects of BCG treatment by patients".
I would appreciate if could share your opinions and answers to the question of this discussion group.
Could you please also share any assessment tool/ questionnaire to identify the side-effects provoke by the Intravesical BCG therapy for non-invasive muscle bladder cancer.
Thank you very much for your help in this matter.
Regards,
Ana Filipa Semedo 
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In Sweden, most urology departments have questionnaires, which is documented at each visit before the next instillation. If any persistent side effects occur, the nurse consult the doctor, before the next instillation is given. I think it is very important to be aware of the side effects, to stop treatment in case of severe side effects!
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Hi,
I need a good inhibitor for CDC42.
I am new to working with this protein and wonder if anyone knows what inhibits it well.
Thank you!
Chuck
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please check this link, it seems to me very useful
regards
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I am trying to establish cell cultures from a sample of bladder cancer that we develop in mice but we have many fibroblasts in our cultures. Does anyone knows how to inhibit them without disturbing cancer cells?
Many thanks!
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You may also want to try to reduce your serum in the growth media to 1%. Depending on your cell line they will also slow down a lot but they will eventually outgrow the fibroblats.
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I am searching for antigens for flow cytometry to confirm that I efficiently isolated primary bladder cancer cells. 
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Actually I am working on urinary bladder cancer.
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I need to find out the tumor markers in the graded tumors. 
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Anyone is doing research for gall bladder cancer in India, its mortality rate is 100%, any findings till date, please help me out.
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The incidence of gallbladder cancer parallels the prevalence of gall stone disease; large and long-standing gall stones being associated with a higher risk of gallbladder cancer. Gall stone disease is common in north India and occurs at a younger age than in the western populations. Moreover, patients with gall stone disease present for treatment a long time after the onset of symptoms. Both these factors result in prolonged exposure of the gallbladder to stones. Besides gall stone disease, various other factors may also play a role in the causation of gallbladder cancer which is an (north) Indian disease.
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N/A
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Thank you. Still looking for the protocol.
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I have been unsuccessfully trying to find the $ costs of bladder cancer per person in Australia. Or just the yearly costs. This information is available for the US but I cannot find Australian information. Is this due to the differences in coding for various procedures?
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Hello Susan,
I have not found any information either on sites relating to Australia.
However, this paper is authored by a ResearchGate members who perhaps could be of assistance:
Arianayagam, R., Arianayagam, M., & Rashid, P. (2011). Bladder cancer: Current management. Australian family physician, 40(4), 209.
I also found find this link - Australia Urology Associates - that could maybe be of help:
This is the website for an Australian urological surgeon who treats bladder cancer; whether his team could point you in the right direction to find the answer to your question:
I hope you find the information that you need.
Very best wishes for your PhD,
Mary
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I was trying to freeze some cells. my cells were like 80% confluent in the flask and I trypsinized them, tried as much as I can to avoid clumpes by drawing cells up and down several times and then took 10 microml of the solution on each side of hemocytometer. However I got very few cells when I counted ( average was 50x10^4). what went wrong in the process for me to get this few number of cells ?
I am using UM UC6 bladder cancer cells.
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Did you look at the flask you were growing them in. Sometimes all of them do not detach.
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Now I'm working on bladder cancer single cell RNA-seq data analysis. I want to choose a suitable gene set (related to urothelium differentiation) to distinguish these single cells into high-grade cancer cells (poorly differentiated) and low-grade cancer cells (well differentiated).
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It's a secret...
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I am working on bladder cancer cells. I am using Decitabine drug for my study. For experiments i dissolved drug in DMSO and after that i aliquoted it and stored it in -80. Every time i used a fresh aliquote for each experiment. I took all the precaution during experiment but i am not getting result even its effect is  already reported in literature. could any one suggest me what changes i have to make for experiments
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With great pride and honor, we would like to invite you to participate in “14th World Cancer Convention” which is going to be held during November 21-23, 2016 at Dubai, UAE.
 For details please visit here:  http://cancer.global-summit.com/middleeast/
you can directly contact on: middleeastoncologists@insightconferences.com
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Useful in differentiating between low grade and high grade carcinomas
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Hi Jasvinder Kaur Bhatia,
Replying to your request on the markers differentiating between low grade and high grade urothelial carcinomas, I would bring to your attention the datasheet of Gary David Steinberg on MedScape in April 08, 2016. Entitled “Urine Tumor Markers in Bladder Cancer Diagnosis Overview of Urine Tumor Markers”, it overviews more than 30 urine tumor biomarkers, which have been reported for use in bladder cancer diagnosis, but only a few are commercially available; the remainder are still being tested. Commercially available tests include the following: Urine cytology; Fluorescence in situ hybridization (FISH); Nuclear matrix protein (NMP-22); BTA stat; BTA TRAK; ImmunoCyt/uCyt+; CertNDx; CxBladder. Newer, voided urine assays (i.e., bladder tumor antigen [BTA stat, BTA TRAK], NMP-22, FDP]) are being used for the detection and surveillance of urothelial carcinoma. These tests have high false-positive and false-negative rates. In the future, other newer assays based on telomerase and microsatellite analysis may prove to be a better detection method than urinary cytology.
Chromosomal alterations have been associated with urothelial carcinoma. One encouraging test is a multitarget interphase FISH assay called UroVysion that consists of probes to the centromeres of chromosomes 3, 7, 17, and 9p21. Aneuploidy of chromosomes 3, 7, and 17 and deletion of chromosome 9 have been associated with high sensitivity and specificity to detect bladder cancer. Often, this is an anticipatory positive result with a positive finding preceding visual evidence of bladder tumor. The use of additional urine markers such as UroVysion (FISH), BTA, and NMP-22 in the initial diagnosis of bladder cancer is still controversial.
Mentioned above are false-positive and false-negative tests, so in each individual case, one have to differentiate between metastatic high-grade urothelial carcinoma and primary poorly differentiated invasive squamous cell carcinoma of the lung (please read paper of A. Gruver et al published in Arch Pathol Lab Med. 2012;136(11):1339-46. doi: 10.5858/arpa.2011-0575-OA).
Best wishes,
Ilya Tsyrlov
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Working plate form.
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Maybe it is to late but I think you can look at the following paper Microarray-  and metabolomics study:
PMID: 20059769 Microarray study
PMID: 24721970 Metabolomics Study
I hope it is useful...
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NMR Metabolomics, I am getting extra peaks in samples of human(bladder cancer) and animal hepato toxicity study. 1H NMR CPMG spectra, attached spectral region. Sample collected in plain vials only.
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Thank you every one for your suggestions. Yes i have TSP as an external reference and we haven't used used the EDA vials. Chenomx is not able to identify the peaks. Attaching the spectra of Rat serum albino wistar with extra peaks.
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Pioglitazone has been withdrawn by FDA as it is considered to promote bladder cancer. But researchers say that such possibility is remote and not based on adequate studies. What is the actual position?
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Actually, Pioglitazone keeps the beta cells of Pancreas under low pressure as it pushes some amount of glucose from the bloodstream into body cells. This means longer life of the beta cells of Pancreas or of Pancreas as a whole , and insulin shots may not be required. Sulfonylureas exert heavy pressure on Pancreas as they  make Pancreas produce insulin unceasingly, often leading to hypoglycemia especially during sleep. Use of Pioglitazone may require less sulfonylurea and thus keep the health of Pancreas good for a longer period of time. 
I am not a Medical Professional, but as a diabetic, I have gathered this information  through studies and from my friends who are doctors. 
In this context, I want to know if the ban on Pioglitazone has been withdrawn by FDA. 
Sibaprasad Dutta
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I am interested in studying platinum resistance in bladder cancer, specifically , I am looking for an Isogenic pair of bladder cancer cell lines where the parent cell is platinum sensitive and the daughter cell line is platinum resistant? Does anyone know of the existence of such cell lines or is willing to share them? Thank you so much.
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Dear Bishoy,
You can contact Prof. Walter Berger (University of Vienna; Austria).
He is registered on RG.
Best regards
Robert
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I am trying to induce bladder cancer in Wistar rats by inoculation of NBT-II cells according to already published procedure (Ohana et al. Gene Ther Mol Biol 8, 181-192, 2004). Unfortunately, despite many attempts I am not successful. Catheterization seems to be correct, cells are viable and animals recover normally after the procedure. Time between inoculation and end of the experiment vary from two weeks to two months, but any animal (from more than twenty) developed cancer.
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Please go for this paper;
The H19-IGF2 Role in Bladder Cancer
Biology and DNA-Based Therapy
The methodology may answer your queries.
The rodent is given a carcinogen, most commonly in the drinking water. BBN
(N -butyl-N- (4-hydroxybutyl) nitrosamine) is a carcinogen given to the rodents in a
concentration of 0.05% in the drinking water. It induces bladder tumors in 95% of the rodents after 25 weeks of administration (Okada et al., 1975). The tumors produced by the carcinogen resemble human bladder cancer in histology, etiology, and in kinetics (25 rat weeks equal 10 human years- the believed incubation period of human bladder cancer). Molecular events occurring during chemical carcinogenesis can be followed (Ariel et al.,
2004). Tumor development and the response to novel treatments can be assessed noninvasively, without scarifying the animal using ultrasonography (Gofrit et al., 2006). The main disadvantages of this model are necessity to handle a carcinogen and the long period required for tumor production.
Best of luck
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I want to know the number of cases of occupational bladder cancer required in case-control study of risk factors for bladder cancer?
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The size of the study (no. of cases and controls) will depend on which causal effects you wish to detect, which degree of increased risk you wish to detect at which alpha level with which power. There are numerous reference to methods in RG answers including mine.
I assume you will be looking at things like aniline dyes, HIV, PAH, tobacco, alcohol, radiation therapy to other organs, general radiation and other chemicals..
you will also need some a priori estimates of likely effects for power studies., based on the literature.
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Someone with experience in nude mice models, can advise the best way to instill in bladder cancer cells??
I'll perform an experiment for test the ability of several cancer cells to attach and growth like a tumoral mass in bladder. I've never try to infuse the cells directly in bladder site; ther are many ways or only one?
Thanks a lot  :)
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Hi Katia,
We have had varying success with different cell lines and mouse strains for establishing orthotopic bladder tumors. There are also a mouse and rat immunocompetent models of bladder cancer that we actually use more frequently. We have had the most success a HCl then NaOH wash of the bladder before instilling the cells. You then need to let the cells sit in dwell for an hour while the mouse is anesthetized. We and others have also used Poly-L-Lysine treatment or a trypsin treatment of the bladder. Regardless of the method it is a pretty difficult procedure to get consistent tumor take. You also need some method to monitor the tumors like luciferase. Or for the rats we use an ultrathin cystoscope. What cell lines would you like to test? Feel free to contact me and I can send more information and pictures of our procedure setup.
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Comparison of the proportion of subjects consuming alcohol or in the the lowest tertile of the dapsone recovery (DPRR) between controls and patients with aggressive bladder cancer showed a 7-fold increased of relative risk in the latter group. 
On the other hand, prominent adverse effects seen during treatment with dapsone are hemolysis and methemoglobinemia. The highest methemoglobin formation with dapsone was observed with CYP2C19, with minor contributions from CYP2B6, CYP2D6 and CYP3A4.  
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I have sequenced tens of single cells of bladder cancer, and got the gene expression profile of each single cell. I am trying to speculate the cancer stem cells mixed in these cells using clustering method, which needs a priori list of "stemness genes". If there are some available common or specific stemness signatures can be used in this analysis? Many thanks.
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The ES markers Nanog, Sox2 and Klf4 are relevant to CSC and can be used to differentiate stem versus non-stem cancer cells.  Please see our most recent paper using SmartFlare to detect CSC (you can download it in my profile).  Other relevant markers are players in the Wnt, notch or sonic hedgehog pathways as these are unregulated in most CSC.  Other surface markers are CXCR4 (Cd184) and MDR1 (CD243) and Muc1 (CD227).
Kind regards,
Steve
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Has anyone begun using (hyperthermia therapy)Gemcitabine and Docetaxel for Bladder cancer unresponsive to BCG?
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Do you mean using the machine Synergo or preheating the chemo?
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We are checking a protein in the urines in order to investigate its role as a marker for bladder cancer but, since its molecular weight is 45 Kda, how can I be sure that this protein come from the epithelium of the bladder or from somewhere else (passing through the glomerular barrier)? Thank you in advance for your help.
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I think that, at any rate, you should normalize it versus urinary creatinine concentration, which is a good measure for the urin's concentration and easily obtainable.
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During cystoscopy before laser prostatectomy you find a nodular bladder suspicious growth. Would you proceed after resecting that growth or prefer to wait for histopathology?
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It is a good question 
In my practice, i Will perform a TURBT and postpone laser prostatectomy
The main reason is not waiting for histopathology but spillage of tumoral cells that theoritically could seed on prostatic respected fossa
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I reconstituted irradiated (1000 rad in two doses) B6 mice with B6 bone marrow and 7 weeks later injected them subcutaneously with MB49 tumor cells. I noticed that the tumor growth rate of the chimeric mice is much slower compared to non-transplanted B6 mice. Has anybody experienced this? Or do you have an idea why that would happen?
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Thank you very much for all the responses! I really appreciate it! We also think it may be due due to the lack of NKT cells in the host mice at the time of tumor injections. We injected tumor cells 7 weeks after irradiation and NKT cells require 12 weeks for the reconstitution. NKT cells have been shown to play a role in tumor immunity and CD1d-/- mice lacking NKT cells have been shown to display reduced tumor growth. (Swann J. et al, Immunology and Cell Biology, 2004; Terabe M., et al, Cancer Research, 2006). 
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I have done a research on bladder cancer cells which showed flavonoids had the ability to suppress cancer.
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We are doing an epidemiological study on the effect of our flavonoid combo " Flavo-Natin" on the recurrence rate of colon adenomas after polypectomy. I will let you know about the results. What is your address for contacts?
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I am keen to speak to specialist nurses involved in the care of patients with bladder cancer. Particularly any nurses attending the SUNA conference in October.
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Yes I do
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I am growing bladder cancer cells in 3D models in vitro and I wish to visualize them using some form of real-time imaging which will still allow me to grow them and use them for protein/RNA extraction. Any suggestions?
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ِDear Naomi
Let me know,have you any experience about the Holomonitor M4?
Sincerely
Ahad
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What are the limitations of using the current biomarkers for bladder cancer?
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Many markers for the detection of bladder cancers have been tested. In some studies the urine markers used in patient surveillance have on occasion been criticized for their low sensitivity in detecting disease.Otherwise, Olaf et al. showed in his review that Almost all urinary markers reported are better than cytology with regard to sensitivity, but they score lower in specificity. According to the author, The development of urinary markers for the detection of bladder cancers is a dynamic field. Therefore it is not possible to review all known markers, simply because of the numerous markers that are available and under investigation.
Please receive these links about Urinary Markers in Bladder Cancer. I hope that can help you with your search.
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Chemotherapy or radiotherapy and what would be the advantage of the choice? One doctor advised to start with chemotherapy and another advised to start with radiotherapy.
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Which type of cancer?
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The samples are from bladder cancer patients. I've been told that the process is difficult due to the small amount of DNA in the sample so I'm looking for any advice before starting. Also if anyone can provide any papers or protocols related to this please let me know.
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A protocol that I used with success is the following: Approximately 15 ml of urine are centrifuged at 3,000 rpm for 20 min; the pellet resuspended and washed three times with 1 ml of phosphate buffer saline (PBS), and then digested for 3–5 h at 56 °C in 150 μl of digestion buffer (50 mM Tris–HCl, pH 8.5; 1 mM EDTA; 1 % Triton X-100 and 0.5 % Tween 20) containing 200 μg/ml of Proteinase K. DNA is purified by phenol and phenol-chloroform-isoamyl alcohol (25:24:1) extraction and ethanol precipitation in 0.3 M sodium acetate (pH 4.6). (J Med Virol 2010)
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Numerous epidemiological article suggest that the driver (truck, bus, etc) are at high risk of bladder cancer. Furthermore, the Working Group (IARC) found that diesel exhaust is a cause of lung cancer (sufficient evidence) and also noted a positive association (limited evidence) with an increased risk of bladder cancer (Group 1).
Therefore, I wonder what the criteria are that can help to identify the high risk of bladder cancer among driver.
For example, are the long hours of driving or long distance driving or the kind of car (truck, taxi... ) possible criteria?
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Dear Yoon,
Exposure to chemicals especially aromatic amines e.g. benzidine may contribute to bladder cancer. Also, one of the most important cases is smoking. The prevalence of bladder cancer may differ according to drivers' age and work history.
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What are the avilable tumor markers for bladder cancer? Or, what is the most reliable diagnostic method for bladder cancer?
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Hello
There are three FDA approved diagnostic assays for bladder cancer. These are Nuclear Mitotic Protein (NMP22), Bladder Tumour Antigen (BTA) and Fibrinogen degradation product (FDP). Unfortunately none of these assays has sufficient diagnostic accuracy to replace cystoscopy. Interestingly, combining age and smoking years of patients has a diagnostic accuracy that is very similar to most current biomarkers as described in a Cancer paper by our group http://onlinelibrary.wiley.com/doi/10.1002/cncr.26544/abstract