Acyclic Hydrocarbons - Science topic

Numerous natural products and drugs contain flexible alkyl chains. The resulting conformational motion can create challenges in obtaining single crystals and thus determining their molecular structures by single-crystal X-ray diffraction (SCXRD)1, 2, 3, 4, 5, 6, 7, 8, 9, 10–11. Here we demonstrate that by using pillar[5]arene-incorporated metal–org...

Until now, little investigation has been done to examine the existence and uniqueness of solutions for fractional differential equations on star graphs. In the published articles on the subject, the authors used a star graph with one junction node that has edges with the other nodes, although there are no edges between them. These graph structures...

The hydroperoxyalkyl radicals (˙QOOH) are known to play a significant role in combustion and tropospheric processes, yet their direct spectroscopic detection remains challenging. In this study, we investigate molecular stereo-electronic effects influencing the kinetic and thermodynamic stability of a ˙QOOH along its formation path from the precurso...

In this study, we investigate the stability of hydroperoxyalkyl radicals, .QOOH, in terms of various stereo-electronic effects stemming from molecular structural features. These radicals are known to play a significant role in combustion and tropospheric processes, yet their direct spectroscopic detection remains challenging. While the thermodynami...

Hepatic steatosis (fatty liver) is a severe liver disease induced by the excessive accumulation of fatty acids in hepatocytes. In this study, we developed reliable in silico models for predicting hepatic steatosis on the basis of an in vivo data set of 1041 compounds measured in rodent studies with repeated oral exposure. The imbalanced nature of t...

Synthetic organic strategies that enable the catalytic and rapid assembly of a large array of organic compounds that possess multiple stereocentres in acyclic systems are somewhat rare, especially when it comes to reaching today's high standards of efficiency and selectivity. In particular, the catalytic preparation of a three-dimensional molecular...

Novel Balaban-like and Balaban-detour-like topological indices are introduced. Starting from the original form of the Balaban index J in [1] where the summand is defined as (didJ)-1/2, we defined three modifications named Balaban-like indices with the summands (didJ)V2, (di+ d)1/2, and [didj/(di+ d)]1/2, and symbolized as Jm1, Jm2, and Jm3, respect...

This chapter is devoted to the 1-3JCCs and to the factors influencing their magnitude. The experimental and calculated J data presented in the subsequent parts of the chapter are arranged with the thought of showing how hybridization, substituent electronegativity, the complex and hydrogen bond formation, and geometry of the compound bear on the JC...

Small alkane and alkene molecules containing a single C=C double bond were ionized using intense 800 nm, 100 fs laser pulses. Time of flight mass spectra shows that strong dissociation of the parent molecule occurs in purely single bonded carbon chains while alkenes gain stability from the presence of a single C=C bond

Excoecaria agallocha Linn. the blinding mangrove tree of historical significance, is well known for its curative properties. In this investigation, crude hexane extract from the dried roots of E. agallocha inhibited 50% of the growth of third instar larvae of Culex quinquefasciatus Say. within 24 h (LC(50): 315 ppm). SiO(2) (60-120) column chromato...

Pheromones regulate male social behaviors in Drosophila, but the identities and behavioral role(s) of these chemosensory signals, and how they interact, are incompletely understood. We found that (z)-7-tricosene, a male-enriched cuticular hydrocarbon that was previously shown to inhibit male-male courtship, was essential for normal levels of aggres...

The impact of four electron acceptors on hydrocarbon-induced methanogenesis was studied. Methanogenesis from residual hydrocarbons may enhance the exploitation of oil reservoirs and may improve bioremediation. The conditions to drive the rate-limiting first hydrocarbon-oxidizing steps for the conversion of hydrocarbons into methanogenic substrates...

Harbours of La Goulette, Rades and Sidi Bou Said are considered as the principal largest and most important port in the Gulf of Tunis characterised by a direct influence of different activities (sailing, industry and fishing) to the Mediterranean Sea. Due to their social and economic impact, a comprehensive assessment of the spatial distribution an...

Under the framework of the IAEA's Technical Co-operation project RAF7/004, international research cruises were carried out in 2004 to assess the distribution of radionuclides and micropollutants in the south-western Mediterranean Sea. Sediments samples had variable concentrations of total aliphatic hydrocarbons and polycyclic aromatic hydrocarbons...

Seven candidates for components of the female sex pheromone of Eilema japonica (Arctiidae, Lithosiinae) were detected in an extract of pheromone glands with a gas chromatograph-electroantennographic detector. The compounds were identified as (Z,Z)-6,9-icosadiene (D20), (Z,Z)-6,9-henicosadiene (D21), (Z,Z,Z)-3,6,9-henicosatriene (T21), (Z,Z)-6,9-doc...

Nonaromatic hydrocarbons and geochemical parameters from 17 sediment-water interface samples were used to assess sources of organic matter in three harbors, located in Santa Catarina State, southern Brazil. The evaluation was based on the molar C/N/P ratios, abundance of resolved nonaromatic hydrocarbons (3.0-25.9 μg g(-1)), unresolved complex mixt...

The acyclic pyrimidine nucleoside phosphonate (ANP) phosphonylmethoxyethoxydiaminopyrimidine (PMEO-DAPym) differs from other ANPs in that the aliphatic alkyloxy linker is bound to the C-6 of the 2,4-diaminopyrimidine base through an ether bond, instead of the traditional alkyl linkage to the N-1 or N-9 of the pyrimidine or purine base. In this stud...

From the methanolic extract of the plant Hyptis verticillata Jacq, was isolated five compounds: the novel compounds cadina-10(15)-en-3-one and 3,7,11,15-tetramethylhexadec-1-en-3-ol and the known compounds 3,7,11,15-tetramethylhexadec-2-en-1-ol, 7,11,15-trimethyl-3-methylenehexadecane-1,2-diol and myo-inositol. All structures were established by sp...

A new series of acyclic C-nucleosides 1',2'-O-isopropylidene-D-ribo-tetritol-1-yl)[1,2,4] triazolo[3,4-b][1,3,4]thiadiazoles bearing arylsulfonamide (5-8) and arylcarboxamide (9-12) residues have been synthesized under microwave irradiation. Thiadiazines 13-15 have been analogously prepared, and upon acid hydrolysis, afforded the free nucleosides 1...

Rhizoremediation involves the breakdown of contaminants in soil resulting from microbial activity that is enhanced in the plant root zone. The objective of this study was to identify Australian native grass species as suitable candidates for rhizoremediation application. Seeds of nine perennial Australian native grasses were sown in soil from a min...

MP2(FULL)/6-311++G** calculations are performed on the cation-pi complexes of Li+ and Mg2+ with the pi-face of linear (ethylene, butadiene, hexatriene, and octatetraene) and cyclic (benzene, naphthalene, anthracene, phenanthrene and naphthacene) unsaturated hydrocarbons. The interaction energy is found to increase systematically as the size of the...

Vicia faba was grown in crude oil polluted soil and its roots were extracted for the detection and estimation of hydrocarbons. Saturated and unsaturated Aliphatic Hydrocarbons (AHs) ranging from C(22) to C(36) were identified in AHs fraction. However, PAHs were not present in the same extract. This could be due to the fact that PAHs being toxic com...

We have applied a quantitative structure-activity relationship (QSAR) approach to analyze the chemical parameters that determine the relative sensitivity of olfaction and nasal chemesthesis to a common set of volatile organic compounds (VOCs). We used previously reported data on odor detection thresholds (ODTs) and nasal pungency thresholds (NPTs)...

A new method of determining the composition of sediment/soil gases and their volatile organic compound (VOC) content is described. VOCs were collected in situ from intertidal sediments in the Menai Strait and surrounding areas. The sampling was performed using a portable sampler comprising a funnel coupled to a SPME fibre. Gases were extracted from...

Ethanol steam reforming is a promising reaction for producing fuel cell hydrogen. Depending on catalyst and reaction conditions, mixtures of condensable hydrocarbons and organic and inorganic gases are produced. This paper proposes an economic and effective solution for separating and detecting these compounds employing a gas chromatograph equipped...

In social insects, recognition of nestmates from aliens is based on olfactory cues, and many studies have demonstrated that such cues are contained within the lipid layer covering the insect cuticle. These lipids are usually a complex mixture of tens of compounds in which aliphatic hydrocarbons are generally the major components. The experiments de...

The Cassini Ultraviolet Imaging Spectrometer (UVIS) observed the extinction of photons from two stars by the atmosphere of Titan during the Titan flyby. Six species were identified and measured: methane, acetylene, ethylene, ethane, diacetylene, and hydrogen cyanide. The observations cover altitudes from 450 to 1600 kilometers above the surface. A...

The susceptibility of typical class D β-lactamases to inhibition by acyl phosph(on)ates has been determined. To a large degree, these class D enzymes behaved very similarly to the class A TEM β-lactamase towards these reagents. Dibenzoyl phosphate stood out in both cases as a lead compound towards a new class of effective inhibitors.

A series of novel acyclic nucleoside analogues containing bis-(hydroxymethyl)phosphinic acid (BHPA) or tris(hydroxymethyl)phosphine oxide (THPO) coupled with DNA nucleobases or with 5-fluorouracil were prepared and their antiviral activity was studied against cytomegalovirus (CMV), varicella-zoster virus (VZV), parainfluenza-virus type 3, reovirus-...

Ten bacterial strains were isolated by enrichment culture, using as carbon sources either aliphatics or an aromatic-polar mixture. Oxygen uptake rate was used as a criterion to determine culture transfer timing at each enrichment stage. Biodegradation of aliphatics (10,000 mg L(-1)) and an aromatic-polar mixture (5000 mg L(-1), 2:1) was evaluated f...

The contents of the paracloacal gland secretions of the alligatorids Alligator mississippiensis, A. sinensis, Paleosuchus palpebrosus, and P. trigonatus were investigated. Novel acyclic hydrocarbon terpenes with a rare trisubstituted 2,4-diene system were identified in the secretions of A. sinensis, P. palpebrosus, and P. trigonatus. The structures...

Novel synthetic approach to mono-O-protected anti-conformationally constrained pyrimidine acyclic nucleoside was attained from the coupling of lithiated 2,4-dimethoxy-6-methylpyrimidine with 1-benzyloxy-3-(tert-butyldiphenylsilyloxy)propan-2-one, followed by the sequential reactions of methylthiomethylation, cyclization, hydroxylation, and dealkyla...

The reaction of 3-methylpentane and 2,4-dimethylpentane toward t-butoxy radicals has been investigated, in neat and benzene solutions, by using the radical trapping technique. Abstraction occurs principally from the tertiary and secondary C-H reaction sites of 3-methylpentane and the tertiary position of 2,4-dimethylpentane. The tertiary and in par...

A gene encoding the enzyme lycopene cyclase in the cyanobacterium Synechococcus sp strain PCC7942 was mapped by genetic complementation, cloned, and sequenced. This gene, which we have named crtL, was expressed in strains of Escherichia coli that were genetically engineered to accumulate the carotenoid precursors lycopene, neurosporene, and zeta-ca...

The main glycophospholipid of Thermoplasma acidophilum is composed of a di-isopranol-2,3-glycero-tetraether. Depending on the growth temperature of the source organism it shows an increasing fraction of pentane cyclizations of its hydrocarbon chains. The thermotropic properties of hydrated samples of its main glycophospholipid, isolated from organi...

The cyclopentadiene (C 5 H 6 ) molecule has emerged as a molecular building block of nonplanar polycyclic aromatic hydrocarbons (PAHs) and carbonaceous nanostructures such as corannulene (C 20 H 10 ), nanobowls (C 40 H 10 ), and fullerenes (C 60 ) in deep space. However, the underlying elementary gas-phase processes synthesizing cyclopentadiene fro...

Acyclic branched or unbranched hydrocarbons are the principal constituents of petroleum and natural gas, which have wide applications as fuels and lubricants as well as raw materials for the production of plastics, rubbers, fibers, solvents, explosives, and industrial chemicals. Since existing estimating methods may provide great deviations for som...

Molecular reconstruction is a rapid and reliable way to provide molecular detail of petroleum fractions, which is required in the kinetic modeling of petroleum conversation processes at the molecular level. In the typical stochastic reconstruction method, the estimation of properties of pseudo molecules that are generated by Monte Carlo sampling de...

To understand the effect of molecular structure (cyclic and acyclic) on the corrosion inhibition properties, cyclohexylamine (CHA) and hexyl amine (HA) were investigated as corrosion inhibitors for Carbon Steel (CS) in 2 N hydrochloric acid at 25, 30, and 35°C. Experimental methods like gravimetric, polarization and impedance spectroscopy were used...

Lycopene, an acyclic hydrocarbon, non-provitamin A carotenoid, is a potent antioxidant with well-documented anticancer properties. In this study, we investigated the effects of dietary lycopene on sub-acute and chronic ultraviolet B (UVB)-induced skin carcinogenesis in SKH-1 mice. Groups of three mice were fed with a nonsupplemented or 1% lycopene...

Based on our modified classification of elemental species, a framework for automatic generation of multilevel Homodesmotic fragment‐separation (mHDFS) reactions for chemical species was proposed. Combined the mHDFS framework with a database of heat of formation (HoF) and the calculated electronic structure data for the elemental mHD species, the mH...

The recent astronomical detection of benzonitrile (C6H5CN) in the cold, starless cloud TMC-1 demonstrates that aromatic chemistry is efficient even in the primordial stages of star and planet formation. C6H5CN may serve as a convenient observational proxy for benzene, which is otherwise challenging to detect in space, provided the chemistry linking...

The first enantioselective palladium-catalyzed decarboxylative allylic alkylation of fully sub-stituted acyclic enol carbonates providing linear α-quaternary ketones is reported. Investigation into the reaction revealed that the use of an electron-deficient phosphinooxazoline ligand renders the enolate geometry of the starting material inconsequent...

C -Glycosylation has found widespread use in the synthesis of biomedically important natural products and pharmaceuticals.

For the first time it has been experimentally shown that a powder of detonation nanodiamonds (DND) and a saturated acyclic hydrocarbon, mono- or dibasic alcohol, used as the reaction mixture after treatment at high pressures (5–8 GPa) and high temperatures (1300–1800°C) results in the formation of diamond single crystals up to 15 micron in size. Th...

Acyclic hydrocarbon molecules favor the gauche or cis conformation, which are more stable in terms of molecular geometry when they are enclathrated in clathrate hydrates. Once they are captured, they maintain their conformations in the hydrate cavities. However, on the basis of Raman spectra and density functional theory (DFT) calculations, we obse...

Trimethylenemethane (TMM) has long been known as a ligand in metal carbonyl complexes such as [η4-(CH2)3C]Fe(CO)3 and [η4-(CH2)3C]Cr(CO)4. The prospects for synthesizing currently unknown TMM complexes of cobalt carbonyl have been explored by a density functional theory study of the binuclear complexes [(CH2)3C]2Co2(CO)n (n = 2, 3, 4, 5, 6). The di...

The R–7 term (E7) in the dispersion expansion is developed in the framework of the general effective fragment potential (EFP2) method, formulated with the dynamic anisotropic Cartesian polarizability tensors over the imaginary frequency range. The E7 formulation is presented in terms of both the total molecular polarizability and the localized mole...

A total of 13 different azines derived from successive substitution of ring -CH- of benzene by N atoms is investigated. All the species are placed in different nodes of the substitution-reaction network diagram (Hasse-diagram), following the substitution pattern. The ground-state ab-initio total energies and corresponding internal energies of all t...

The set of 42 diastereomeric structures resulting from various degrees of substitution of secondary –CH2– groups by amines –NH– within the adamantane skeleton are investigated. They are placed into a substitution‐reaction network viewed as a partial ordering, and the resultant reaction network (or Hasse diagram) displayed to illustrate different fe...

The effect of metal-nanocomposites (Me-NC) of cobalt and zinc (Co- and Zn-NC, correspondingly) synthecized on the basis of vinylpyrrolidone (PS) on the metal-accumulative proteins with antioxidant potential metallothioneins (MT) in crucian carp (Carassius auratus gibelio) was studied. Fish was subjected to the effect of Co-NC, Zn-NC, Co2+, Zn2+ or...

Rates and Selectivities for Carbon-Carbon Bond Cleavage in Cyclic and Acyclic Hydrocarbons Catalyzed by Metal Clusters David W. Flaherty and Enrique Iglesia, University of California at Berkeley, Berkeley, CA Selective ring opening of arenes requires the cleavage of specific endocyclic C-C bonds without significant losses via dealkylation or...

The naphthenic acids of oil sands process-affected water (OSPW) are said to be important toxicants. The major acids are stated to have alicyclic structures and recently, numerous of these have been identified, but some evidence suggests 'aromatic' acids are also present. The proportions of such acids have not been reported because they exist in so-...

Mono- and bi-nuclear acyclic and macrocyclic complexes with hard-soft Schiff base, H(2)L, ligand derived from the reaction of 4,6-diacetylresorcinol and thiocabohydrazide, in the molar ratio 1:2 have been prepared. The H(2)L ligand reacts with Co(II), Ni(II), Cu(II), Zn(II), Mn(II) and UO(2)(VI) nitrates, VO(IV) sulfate and Ru(III) chloride to get...

Rhodium(II) dicarboxylate complexes were discovered to catalyze the intramolecular amination of unactivated primary, secondary, or tertiary aliphatic C-H bonds using aryl azides as the N-atom precursor. While a strong electron-withdrawing group on the nitrogen atom is typically required to achieve this reaction, we found that both electron-rich and...

Stable organic carbon isotope ratios (δ13C) of bulk organic matter (OM) are commonly used for environmental reconstructions in lacustrine sediment sequences as a tool for reconstructing palaeovegetation. This interpretation is underpinned by the assumption that variations of bulk δ13C can discriminate between C3 and C4 plant materials and thus infe...

Accurate analytical methods are required to develop and evaluate the quality of new renewable transportation fuels and intermediate organic liquid products (OLPs). Unfortunately, existing methods developed for the detailed characterization of petroleum products, are not accurate for many of the OLPs generated from non-petroleum feedstocks. In this...

A one-pot synthesis of polyrotaxanes has been developed. The method employs a supramolecular monomer comprising a polymerizable ammonium salt and crown ether, in combination with dynamic ADMet polymerization. Ultimately, highly efficient complexation, polymerization, and end-capping were accomplished in a single operation to yield polyrotaxanes wit...

Aliphatic and aromatic hydrocarbon fluxes were measured in time series sediment trap samples at 200 m and at 1000 m depths in the open Northwestern Mediterranean Sea, from December 2000 to July 2002. Averaged fluxes of n-alkanes, UCM and T-PAH(35) were 2.96 ± 2.60 μg m(-2) d(-1), 64 ± 60 μg m(-2) d(-1) and 0.68 ± 0.59 μg m(-2) d(-1), respectively....

Analysis of dissolved methane, ethylene, acetylene, and ethane in water is crucial in evaluating anaerobic activity and investigating the sources of hydrocarbon contamination in aquatic environments. A rapid chromatographic method based on phase equilibrium between water and its headspace is developed for these analytes. The new method requires min...

Aliphatic and polycyclic aromatic hydrocarbons (PAHs) were determined in surficial sediments from the Aegean Sea in the Eastern Mediterranean in 2008. Total aliphatic hydrocarbons (n-C12 to n-C35) ranged from 330 to 2,660 ng g(-1) dry weight (dwt), while aromatics (19 PAHs) varied between 73.5 and 2,170 ng g(-1) dwt. Total concentrations of both al...

The 13C nmr chemical shifts of aliphatic hydrocarbons were derived from chemical shifts and probabilities of individual chain conformations. Conformer resonances were calculated with parameters developed for conformationally homogeneous cyclic molecules. Conformer populations were derived from bond rotation potentials and steric energy contribution...

We report an enantioselective conjugate addition nitro-Mannich reaction protocol which combines dialkylzinc, aromatic nitro alkene and imine to form two C-C bonds and three contiguous stereocenters in one reaction vessel. Absolute stereochemistry was controlled from the initial 1,4-addition of dialkylzinc to aromatic nitroalkenes by known copper-ch...

Most of the methods for the creation of all-carbon quaternary stereogenic centers in acyclic systems were developed in the last decade showing the contemporary interest of this field of research. Initial strategies, where chiral entities were linked to carbon skeleton, to enantioselective catalysis and finally to strategies where several carbon-car...

A new method was developed for testing antiviral compounds against plant viruses based on rapidly growing brassicas in vitro on liquid medium. This method enables exchange of media containing tested chemicals in various concentrations and simultaneous evaluation of their phytotoxicity and antiviral activity. While using ribavirin as a standard for...

A soil bacterium isolated from oil-polluted sand samples collected in the Saudi Arabian Desert has been determined as Nocardia cyriacigeorgica, which has a high capacity of degrading and utilizing a broad range of hydrocarbons. The metabolic pathways of three classes of hydrocarbons were elucidated by identifying metabolites in cell-free extracts a...

Sediment samples from multiple sites in the North Sea Coast of England were solvent extracted and analysed by a quadruple gas chromatograph equipped with a mass spectrometer detector in order to determine the concentration and distribution of aliphatic and alicyclic n-alkanes. Results indicate that most of the organic species present in the sedimen...

A study was conducted to investigate the synthesis of bis- and trisindolylmethanes (BIM and TIM). The study focused on investigating the variations found in synthesizing these useful aromatic heterocycles. It introduced different synthetic routes to 3,3'-BIMs, ranging from usual to more exotic methods. The preparation of 2,2'- and 2,3'-BIMs and yue...

Combination of information technology and separation sciences opens a new avenue to achieve high sample throughputs and therefore is of great interest to bypass bottlenecks in catalyst screening of parallelized reactors or using multitier well plates in reaction optimization. Multiplexing gas chromatography utilizes pseudo-random injection sequence...

Petroleum-hydrocarbon-degrading bacteria were obtained after enrichment on crude oil (as a 'chocolate mousse') in a continuous supply of Indonesian seawater amended with nitrogen, phosphorus and iron nutrients. They were related to Alcanivorax and Marinobacter strains, which are ubiquitous petroleum-hydrocarbon-degrading bacteria in marine environm...

Changes in hydrocarbon composition were investigated during maturation of three varieties of linseed (H52, O116, and P129) cultivated in Tunisia. The hydrocarbon fraction of the three linseed oil samples was found to contain mainly n-alkanes and squalene. The greatest decrease of these components occurred between 7 and 21 days after flowering (DAF)...

Investigation of the chemical constituents of the fruits of Knema glauca (Myristicaceae) yielded a new acyclic diterpene acid, named glaucaic acid 4, together with four acylphenols, including 1-(2,6-dihydroxyphenyl) tetradecan-1-one 1, malabaricone A 6, dodecanoylphloroglucinol 7 and 1-(2,4,6-trihydroxyphenyl)-9-phenylnonan-1-one 8, two lignans ses...

Forensic entomology uses pig carcasses to surrogate human decomposition and to investigate the entomofaunal colonization. Insects communicate with their environment through the use of chemical mediators, which in the case of necrophagous insects, may consist in the cadaveric volatile organic compounds (VOCs) released by the corpse under decompositi...

Systemic change : A system of transformations between helical structures was observed to be governed by interactions mediated by the electronic effects of substituents, entropic effects, the conformational preferences of organic building blocks, and the coordinative preferences of the metal ion. All of these effects were important, but all must be...

In this work, 1,2,3,4,5,8-hexahydro-1,3,7-trimethyl-2,4-dioxopyrido[2,3-d]pyrimidine-6-carboxamide derivatives were synthesized in a simple and efficient method from the four-component condensation reaction of diketene, an aliphatic or aromatic amine, an aromatic aldehyde, and 6-amino-1,3-dimethyluracil in the presence of a catalytic amount of p-to...

More then 600 carotenoids are responsible for yellow or reddish coloration of plants and animals. Beside the coloration these molecules have special metabolic effects in plants and animals, as well. Carotenoids occur in the skin, ovary, liver and eyes, but the different types are distributed in a characteristic way in the various tissues. Birds, as...

A general preparation for aromatic and aliphatic, cyclic as well as linear, symmetric and asymmetric difluoromethylenedioxy derivatives is described. The alcohols were reacted with thiophosgene to give thiocarbonates, which in turn were reacted with BrF3. The fluorination step is complete in seconds with moderate to high yields under mild condition...

The tertiary structure of the TC5b miniprotein is stabilized by inter-residue interactions of the Trp-cage, which is composed of a Tyr and several Pro residues surrounding a central Trp residue. The interactions include Ar-Ar (aromatic side-chain-aromatic side-chain), Ar-NH (aromatic side-chain-backbone amide), and CH-pi (aromatic side-chain-alipha...

The composition of coal-derived light oil (IBP-220 °C) was separated into 5 fractions by atmospheric distillation and analyzed by gas chromatography/mass spectrometry (GC/MS). The light oil was made at 0.1 t/d coal direct liquefaction bench scale unit (BSU) at China Coal Research Institute (CCRI). Six groups of organics, including acyclic hydrocarb...

The preparation of a long-chain aliphatic alpha,omega-diene from plant oil derivatives and its subsequent polymerization through acyclic diene metathesis (ADMET) is described. The ADMET bulk polymerization of the thus-obtained monomer, undecyl undecenoate, was investigated and optimized by applying ruthenium-based metathesis catalysts from Grubbs a...

The partial molar volume changes in the transfer of several hydrophobic molecules, which are composed of aromatic rings and an aliphatic chain of different lengths, from carbon tetrachloride to water (DeltaV(hyd)) are calculated using the three-dimensional interaction site model theory of molecular solvation. The theory reproduces recent experiment...

Temporal and spatial variations in the composition of particulate organic matter (POM) from Florida Bay, USA were examined. The predominance of short-chain homologues for n-alkanes, n-alcohols and n-fatty acids as well as relatively high abundance of C(27) and C(28) sterols suggested that an autochthonous/marine source of OM was dominant bay-wide....

Limestones associated with fossil chemosynthetic biological communities are found in Tappu Kanajirizawa and Teshionakagawa Abeshinaigawa, central Hokkaido, northern Japan. They were studied to ascertain their lipid distributions and δ13C values of lipid in order to investigate molecular records of archaea and bacteria associated with the anaerobic...

Surface seawater samples were collected in the Irish Sea and Liverpool Bay area from the R.V. Prince Madog during the period of 25-31 of March 2006. VOCs were purged with nitrogen, pre-concentrated on a SPME fibre and analysed immediately on a GC-MS. Target compounds quantified were halogenated (0.2-1400 ng L(-1)), BTEXs and mono-aromatics (1.5-290...

The temporal variability and bioaccumulation dynamics of C(12-25)n-alkanes, isoprenoids and unresolved aliphatic hydrocarbons (UCM) were studied in a detritivorous fish (Sábalo: Prochilodus lineatus) collected from 1999 to 2005 in the sewage impacted Buenos Aires coastal area. Fish muscles contain huge amounts of n-C(12-25) (165+/-93, 70+/-48 or 28...

A new approach to prepare an acyclic permutant of kalata B1, a cysteine-rich plant cyclopeptide with uterotonic activity, is described. The synthetic codon-optimized cDNA sequence encoding this 29-residue peptide was cloned and fused in-frame to the His(6)-tagged thioredoxin gene in the bacterial expression vector pET-32a. The fusion protein was ov...

When labeled with iodine-131, the antitenascin monoclonal antibody (mAb) 81C6 has shown promise as a targeted radiotherapeutic in patients with brain tumors. Because of its more favorable gamma-ray properties, lutetium-177 might be a better low-energy beta-emitter for this type of therapy. Chimeric 81C6 (ch81C6) was labeled with (177)Lu using the a...

Free nitriles NCCH2R (1a R = CO2Me, 1b R = SO2Ph, and 1c R = COPh) with an acidic alpha-methylene react with acyclic nitrones -O+N(Me)=C(H)R' (2a R' = 4-MeC6H4 and 2b R' = 2,4,6-Me3C6H2), in refluxing CH2Cl2, to afford stereoselectively the E-olefins (NC)(R)C=C(H)R' (3a-3c and 3a'-3c'), whereas, when coordinated at the platinum(II) trans-[PtCl2(NCC...

Plankton samples (20-350 microm and >350 microm) collected at three transects along the Galician coast (NW Spain) were analysed for individual aliphatic and aromatic hydrocarbons by GC-MS. Sample collection was performed in April-July 2003, after the Prestige oil spill (November 2002), to determine whether the hydrocarbons released into the water c...

[Structure: see text] OH...OH hydrogen bond mediated scalar couplings have been observed in acyclic syn- and anti-1,3-diols using a 2D 1H COSYLR NMR experiment and quantified with an uncertainty of +/-0.02 Hz with a selective-excitation spin-echo NMR experiment. A theoretical investigation confirmed the importance of the hydrogen bond in mediating...

In November 2002, the sinking of the Prestige oil tanker off the Galician coast (N.W. Spain) caused the largest ecological catastrophe in the history of Spain, affecting the coast called the 'Costa da Morte' (Galicia, N.W. Spain). This work is focused on the study of the oil contamination of the intertidal area of two beaches located on this stretc...

DNA lesions that have escaped DNA repair are tolerated via translesion DNA synthesis (TLS), carried out by specialized error-prone DNA polymerases. To evaluate the robustness of the TLS system in human cells, we examined its ability to cope with foreign non-DNA stretches of 3 or 12 methylene residues, using a gap-lesion plasmid assay system. We fou...