Zoeb Jiwaji's research while affiliated with The University of Edinburgh and other places
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Publications (30)
General anesthesia represents a common clinical intervention and yet can result in long-term adverse CNS effects particularly in the elderly or dementia patients. Suppression of cortical activity is a key feature of the anesthetic-induced unconscious state, with activity being a well-described regulator of pathways important for brain health. Howev...
Brain metabolic pathways relating to bioenergetic and redox homeostasis are closely linked, and deficits in these pathways are thought to occur in many neurodegenerative diseases. Astrocytes play important roles in both processes, and growing evidence suggests that neuron-astrocyte inter-cellular signalling ensures brain bioenergetic and redox home...
Failed regeneration of myelin around neuronal axons following central nervous system damage contributes to nerve dysfunction and clinical decline in various neurological conditions, for which there is an unmet therapeutic demand. Here, we show that interaction between glial cells – astrocytes and mature myelin-forming oligodendrocytes – is a determ...
Failed regeneration of myelin around neuronal axons following central nervous system damage contributes to nerve dysfunction and clinical decline in various neurological conditions, for which there is an unmet therapeutic demand. Here, we show that interaction between glial cells, astrocytes and mature myelin-forming oligodendrocytes, is a critical...
Astrocytes play key roles in CNS development as well as well as neuro-supportive roles in the mature brain including ionic, bioenergetic and redox homeostasis. Astrocytes undergo rapid changes following acute CNS insults such as stroke or traumatic brain injury, but are also profoundly altered in chronic neurodegenerative conditions such as Alzheim...
Alzheimer’s disease (AD) alters astrocytes, but the effect of Aß and Tau pathology is poorly understood. TRAP-seq translatome analysis of astrocytes in APP/PS1 ß-amyloidopathy and MAPT P301S tauopathy mice revealed that only Aß influenced expression of AD risk genes, but both pathologies precociously induced age-dependent changes, and had distinct...
This corrects the article DOI: 10.1038/ncomms15132.
The influence that neurons exert on astrocytic function is poorly understood. To investigate this, we first developed a system combining cortical neurons and astrocytes from closely related species, followed by RNA-seq and in silico species separation. This approach uncovers a wide programme of neuron-induced astrocytic gene expression, involving N...
Reads lost due to SSS (real-world data-set)
Astrocytic genes significantly altered by the presence of neurons.
Difference in P-value (standard vs. SSS workflow) in activity-regulated neuronal genes.
Activity-dependent neuronal gene fold change (standard vs. SSS workflow)
Supplementary Figures.
Reads lost due to species-specific sorting (SSS, theoretical reads)
Within the group of genes repressed in vivo compared to in vitro (Cahoy et al (2008) (654 genes repressed >2-fold) the influence of neurons on astrocytic expression is shown, ranked according to fold-change.
Neuron-induced astrocytic genes (>2-fold) compared to data in Zhang et al (2016, taking genes expressed >0.5 FPKM) and the fold change in expression in human astrocytes in the individuals 40 reported.
Within the group of genes elevated in vivo compared to in vitro (Cahoy et al (2008) (695 genes induced >2-fold) the influence of neurons on astrocytic expression is shown, ranked according to fold-change.
Neurotransmitter uptake and metabolism genes altered by the presence of neurons.
Genes induced in astrocytes by synaptic activity in the presence of TBOA.
Activity-induced astrocytic genes within the astrocyte-neuron lactate shuttle pathway compared to data in Zhang et al (2016, taking genes expressed >0.5 FPKM) and the fold change in expression in human astrocytes in the individuals 40 reported.
Within the group of genes repressed in astrocytes by neurons (>2-fold), expression levels and fold-change in pre- vs. post-natal human astrocytes (from data in Zhang et al (2016)) is shown.
Genes whose expression is altered >2-fold as a result of 5% contamination of astrocytes with neuronal mRNA.
Astrocyte-enriched (relative to neurons) activity responsive genes shown in bold.
Genes induced in astrocytes by synaptic activity.
Activity-induced astrocytic genes (>2-fold) compared to data in Zhang et al (2016, taking genes expressed >0.5 FPKM) and the fold change in expression in human astrocytes in the individuals 40 reported.
Enriched transcription factor motifs in the promoters of astrocytic activity-response genes.
Within the group of genes induced in astrocytes by neurons (>2-fold), expression levels and fold-change in pre- vs. post-natal human astrocytes (from data in Zhang et al (2016)) is shown.
Astrocytic components of the astrocyte-neuron lactate shuttle significantly induced by synaptic activity.
Background
The CNS has high energy requirements and CNS metabolism is often disrupted in disease. Astrocytes, the predominant CNS glucose utilisers, convert glucose to lactate to fuel neuronal metabolism. However, the extent to which this pathway is regulated by neuronal activity is poorly understood. We hypothesised that neuronal activity increase...
Citations
... Astrocytes generated using the LSF protocol resemble morphologically mature astrocytes Despite having been neglected for decades, the key role of astrocytes in neurodegeneration has become increasingly evident [43]. To study astrocytic involvement in pathological mechanisms in more detail, disease modeling using iPSC-derived cultures has become a mainstream procedure. ...
... The astrocytic reaction to neurodegeneration can be assimilated to a medal: one face represents the pro-astrogliotic response that astrocytes can create through the production of cytokines, ROS or, more generally, of pro-inflammatory molecules; the opposite face, however, coincides with the attempt of these cells to produce neurotrophic factors, such as the brain-derived neurotrophic factor (BDNF), with the aim of protecting neurons from degeneration [25,26]. Therefore, we have on the one hand the development of a toxic Astrocytes and Aβ interaction. ...
... On DIV ~2, one-half of the medium was replaced with a growth medium containing the anti-mitotic cytosine arabinoside (Sigma-Aldrich) which restricts astrocytes and microglia to <0.01% (Hasel et al., 2018). Thereafter, the growth medium was replaced every other day. ...
... Moreover, a recent report suggested that current murine astrocyte differentiation protocols are unable to produce mature astrocytes 23 , in contrast to the thoroughly verified 20 human differentiation protocol analyzed above. Other groups have also revealed a similar lack of maturity in astrocytes differentiated without critical developmental cues from neurons 12,21 , underscoring the benefit of the mixed cell type cultures used in the human dataset and further emphasizing the need to understand cell fate decisions to better optimize murine glial differentiations. Starting from a serum-free astrocyte differentiation protocol 22 that produces immature astrocytes from mESCs, we developed a modified protocol aimed at producing CNS astrocytes ( Fig. 2a and Extended Data Fig. 6a). ...
... The blockade of CREB phosphorylation by CCL2 could also contribute to this. In fact, CREB has shown to modulate lactate production in cultured astrocytes [44]. Also, the reduced release of lactate may indicate that the ATP obtained from glycogenolysis is being used by astrocytes for other purposes such as the refill of their endoplasmic reticulum stores of Ca 2+ through sarco/endoplasmic reticulum Ca 2 -ATPase (SERCA) pumps [45], or to increased mitochondrial oxidative metabolism of pyruvate formed through glycolytic pathway. ...