Zhu Li’s research while affiliated with Southwest University and other places

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Publications (19)


Evolutionary rates of genes encoding proteins in the Chlorophorus mitochondrial genomes.
Phylogenetic tree of Chlorophorus based on the PCGs + rRNAs + tRNAs datasets obtained using MrBayes and IQtree. The numbers on branches are Bayesian posterior probabilities (PP, (left)) and bootstrap values (BS, (right)). The sclerites of endophallus are given.
Comparative Mitogenomics in the Genus Chlorophorus (Coleoptera: Cerambycidae) and Its Phylogenetic Implications
  • Article
  • Full-text available

December 2024

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50 Reads

Zhengju Fu

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Lu Chen

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Lichao Tian

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[...]

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Zhu Li

Chlorophorus Chevrolat, 1863, one of the most species-rich genera of Clytini, comprises 36 subgenera and 302 species/subspecies, with some species being of significant economic importance. To assess the monophyly and subgeneric system of this genus, we newly obtained mitochondrial genomic data from 21 species of Chlorophorus via high-throughput sequencing and reconstructed the phylogeny of this genus using ML and BI methods. The mitochondrial genomes of all sequenced Chlorophorus species were found to comprise 13 protein-coding genes (PCGs), 22 transfer RNAs (tRNAs), two ribosomal RNAs (rRNAs), and one non-coding region (control region, CR), reflecting a highly conserved gene arrangement. The mitochondrial genomes of the 21 Chlorophorus species range from 15,387 bp to 15,779 bp in length, and all exhibited AT bias. Analysis of the non-synonymous and synonymous substitution rates revealed that ATP8 has the highest evolution rate, whereas COI has the lowest. Further, phylogenetic analyses were performed based on different datasets (13 PCGs + 2 rRNAs, 13 PCGs + 2 rRNAs + 22 tRNAs, PCG123, PCG12) using maximum likelihood (ML) and Bayesian inference (BI) methods. The results indicate that Chlorophorus is monophyletic, but the subgenera Humeromaculatus Özdikmen, 2011; Immaculatoides Özdikmen, 2022; Brevenotatus Özdikmen, 2022; and Chlorophorus (s. str.) Chevrolat, 1863, are not monophyletic. Based on the comparison of male genitalia, we found that the sclerites of the endophallus may exhibit phylogenetic signals for the genus.

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Taxonomic notes on the genus Chlorophorus Chevrolat, 1863 (Coleoptera, Cerambycidae), with one new synonym and four newly recorded species from China

October 2024

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99 Reads

Chlorophorus fainanensis Pic, 1918 is redescribed. Four species, C. coniperda Holzschuh, 1992, C. diversicolor Holzschuh, 2016, C. orbatus Holzschuh, 1991 and C. pinguis Holzschuh, 1992 are newly reported from China. A new synonymy, Chlorophorus arciferus (Chevrolat, 1863) = Chlorophorus semisinuatus Pic, 1949, syn. nov. is proposed.


Adult habitus of Nadezhdiella cantori (Hope, 1843).
Genome map of the mitogenome of N. cantori.
Bayesian tree of 28 species of Cerambycinae, including Nadezhdiella cantori (in this study, NC_061180) and 4 outgroups based on the sequence of 13 mitochondrial protein-coding genes. Numbers on each node are posterior probabilities.
The complete mitochondrial genome of Nadezhdiella cantori (Hope, 1843) (Coleoptera: Cerambycidae)

October 2022

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123 Reads

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1 Citation

The complete mitochondrial genome of Nadezhdiella cantori (Hope, 1843) is 16,049 bp in length, containing 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), two ribosomal RNA genes (rRNAs), and an A-T rich region (control region). The gene order is conserved and identical to most other previously sequenced Cerambycidae. Phylogenetic analysis showed that the newly sequenced N. cantori was in a well-supported clade tribe Cerambycini, subfamily Cerambycinae. These results support the currently accepted taxonomy and provide a better understanding of the phylogenetic analysis of the Cerambycidae.


On the identity of Oberea acuta Gressitt, 1951, O. bisbipunctata Pic, 1916, O. notata Pic, 1936 and O. shimomurai Kurihara & N. Ohbayashi, 2007 (Coleoptera, Cerambycidae, Lamiinae) with a new synonym

September 2021

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35 Reads

Zootaxa

Oberea acuta Gressitt, 1951 is redescribed, the diagnosis of O. notata Pic, 1936 and O. bisbipunctata Pic, 1916 were provided based on examination of type material and additional specimens. Illustrations of habitus and genitalia are provided, and a key to separate these three species is presented. Their distribution is critically examined, notably that of O. bisbipunctata, whose previous records in China are invalidated. Oberea shimomurai Kurihara & N. Ohbayashi, 2007 is considered a junior synonym of Oberea notata Pic, 1936.



Some taxonomic notes on the genus Oberea Dejean, 1835 from Asia (Coleoptera, Cerambycidae, Lamiinae)

January 2017

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315 Reads

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1 Citation

In the current work, the following taxonomic changes of genus Oberea Dejean, 1835 are proposed: O. flavescens Breuning, 1947, rest. stat.; O. toi Gressitt, 1939, rest. stat.; O. sylvia Pascoe, 1858, rest. stat.; O. taiwana Matsushita, 1933 = O. taihokuensis Breuning, 1962, syn. n.; O. sumbana Breuning, 1961 = O. antennata Franz, 1972, syn. n.; O. brevithorax Gressitt, 1939 is newly recorded from Vietnam.






Citations (4)


... An enhanced pre-trained Inception-v3 model [37] achieved an Acc of 67.9%. Additionally, the saliency-guided discriminative learning network (SGDL-Net) [38], utilizing a multi-task learning framework with a dualbranch architecture for global and fine-grained feature extraction, achieved an Acc of 71.2% and an MF1 of 60.6%. However, our multi-task framework, integrating the DAM-Net for the main task and the ResNet-50 for the subsidiary task, outperforms the SGDL-Net with Acc and MF1 improvements of 2.9% and 2.0%, respectively. ...

Reference:

Enhanced Pest Recognition Using Multi-Task Deep Learning with the Discriminative Attention Multi-Network
Saliency Guided Discriminative Learning for Insect Pest Recognition
  • Citing Conference Paper
  • July 2021

... In Phasmatodea, cases of remarkable sexual dimorphism and a degree of polymorphism are quite frequent, bringing difficulties for taxonomic studies. Nevertheless, molecular approaches have been of great importance to delimit distinct independent evolutionary unities, not just in that group, but also in several insect orders [36][37][38][39]. DNA sequences have been commonly and recently used to recover the higher-level phylogenetic relationships of phasmids [5,[40][41][42][43][44][45]. ...

Taxonomic note of Oberea fuscipennis (Chevrolat, 1852) based on morphological and DNA barcode data (Coleoptera, Cerambycidae, Lamiinae)

Zootaxa

... Oberea worldwide was revised by Breuning (1960Breuning ( -1962. Some species were downgraded to infrasubspecific rank in Breuning's work basing on the similarity of body coloration (Breuning 19601962), and some of them were restored or described as new species (Kurihara and Ohbayashi 2007;Kurihara 2009;Li et al. 2014Li et al. , 2016. During the recent study, some further taxonomic clarification of the genus Oberea is presented in the current work, based on examination of types. ...

On the identity of Oberea formosana Pic, 1911, with description of Oberea pseudoformosana sp. n. from China (Coleoptera: Cerambycidae)

Revue suisse de zoologie

... The endemic Chinese genus Meiyingia (Cerambycidae: Cerambycinae: Oemini) was erected by Holzschuh (2010) for a single species, Meiyingia paradoxa Holzschuh, 2010 from Henan and Shaanxi, China. Li et al. (2015) added a second species, Meiyingia jinyunensis Li & Chen, 2015 from Chongqing, China. This genus thus had only two described species before this study. ...

p class="HeadingRunIn"> A new species of the genus Meiyingia Holzchuh, 2010 (Coleoptera, Cerambycidae, Cerambycinae) from China </p
  • Citing Article
  • June 2015

Zootaxa