Zhaoyi Li’s research while affiliated with Hebei University and other places

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Publications (6)


Comparative mitogenomics of Cheiracanthium species (Araneae: Cheiracanthiidae) with phylogenetic implication and evolutionary insights
  • Article

February 2025

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20 Reads

Zhaoyi Li

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The genus Cheiracanthium C. L. Koch, 1839 is the most species-rich genus of the family Cheiracanthiidae. Given the unavailability of information on the evolutionary biology and molecular taxonomy of this genus, here we sequenced nine mitochondrial genomes (mitogenomes) of Cheiracanthium species, four of which were fully annotated, and conducted comparative analyses with other well-characterized Araneae mitogenomes. We also provide phylogenetic insights on the genus Cheiracanthium . The circular mitogenomes of the Cheiracanthium contain 37 genes, including 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), two ribosomal RNA genes (rRNAs) and one putative control region (CR). All genes show a high A+T bias, characterized by a negative AT skew and positive GC skew, along with numerous overlapped regions and intergenic spacers. Approximately half of the tRNAs lack TΨC and/or dihydrouracil (DHU) arm and are characterized with unpaired amino acid acceptor arms. Most PCGs used the standard ATN start codons and TAR termination codons. The mitochondrial gene order of Cheiracanthium differs significantly from the putative ancestral gene order ( Limulus polyphemus ). Our novel phylogenetic analyses infer Cheiracanthiidae to be the sister group of Salticidae in BI analysis, but as sister to the node with Miturgidae, Viridasiidae, Corinnidae, Selenopidae, Salticidae, and Philodromidae in ML analysis. We confirm that Cheiracanthium is paraphyletic, for the first time using molecular phylogenetic approaches, with the earliest divergence estimated at 67 Ma. Our findings enhance our understanding of Cheiracanthium taxonomy and evolution.


Habitus of Clubiona longyangensis sp. nov. A male (holotype), dorsal view B same, ventral view C female (paratype), dorsal view D same, ventral view.
Clubiona longyangensis sp. nov., holotype male A left palp, ventral view B same, prolateral view C same, retrolateral view. Abbreviations: C = conductor; E = embolus; LTA = lateral tibial apophysis; PPA = prolateral patellar apophysis; RFA = retrolateral femoral apophysis; RPA = retrolateral patellar apophysis; RTA = retrolateral tibial apophysis; VTA = ventral tibial apophysis.
Clubiona longyangensis sp. nov., paratype female A epigyne, ventral view B vulva, dorsal view. Abbreviations: A = atrium; B = bursa; CD = copulatory duct; CO = copulatory opening; FD = fertilisation duct; S = spermatheca; SA = spermathecal appendage.
Habitus of Clubiona multiprocessa sp. nov. A male (holotype), dorsal view B same, ventral view C female (paratype), dorsal view D same, ventral view.
Clubiona multiprocessa sp. nov., holotype male A left palp, ventral view B same, prolateral view C same, retrolateral view. Abbreviations: C = conductor; E = embolus; LTA = lateral tibial apophysis; PPA = prolateral patellar apophysis; RFA = retrolateral femoral apophysis; RPA = retrolateral patellar apophysis; RTA = retrolateral tibial apophysis; VTA = ventral tibial apophysis.

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Two new species of the Clubiona corticalis group (Araneae, Clubionidae) from Yunnan, China
  • Literature Review
  • Full-text available

January 2025

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4 Reads

Two new species belonging to the corticalis group of the sac spider genus Clubiona Latreille, 1804 are described from both males and females: Clubiona longyangensissp. nov. and Clubiona multiprocessasp. nov. The two species are currently known to occur in Baoshan City and Dali Bai Autonomous Prefecture, Yunnan, China, respectively. Detailed descriptions, diagnoses, and photographs of the two species are provided.

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Phylogeny of euophryine jumping spiders from ultra‐conserved elements, with evidence on the intersexual coevolution of genitalia (Araneae: Salticidae: Euophryini)

January 2025

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144 Reads

Systematic Entomology

Zhaoyi Li

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Wenqiang Zhang

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[...]

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Junxia Zhang

Knowledge of phylogeny is required to understand the evolution of highly diverse groups such as the euophryine jumping spiders, a lineage showing high species and morphological diversity. In this study, we applied a phylogenomic approach using ultra‐conserved elements (UCE) obtained from 145 taxa to infer the phylogeny of euophryine jumping spiders. The results provide a well‐supported phylogenetic framework for Euophryini, especially for the deeper relationships, in which the monophyly of Euophryini, as well as most clades corresponding to a genus or a group of closely related genera, are strongly supported. Additionally, the evolutionary patterns of male embolus length and female copulatory duct length of 117 euophryine species were investigated through ancestral character state reconstruction and phylogenetically independent contrast analyses using the UCE phylogenetic framework. The results suggest strongly that the evolution of the lengths of male embolus and female copulatory duct in Euophryini is positively correlated. The common ancestor of Euophryini likely had relatively short embolus and copulatory duct, followed by repeated lengthening or shortening of both structures in different lineages. Possible mechanisms that may have caused this intersexual coevolution pattern in Euophryini are discussed. This study advances our understandings of the phylogeny, systematics and genitalic evolution of euophryines, providing a solid foundation for future studies on the diversification and evolution of this jumping spider group.


Two new species of the genus Cheiracanthium C. L. Koch, 1839 (Araneae, Cheiracanthiidae) from China

May 2024

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34 Reads

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1 Citation

Two species of the long-legged sac spider genus Cheiracanthium C. L. Koch, 1839 collected from China are diagnosed and described as new to science: Cheiracanthium bannaensissp. nov. (♂♀) from Yunnan Province and C. bifurcatumsp. nov. (♂♀) from Xinjiang Uyger Autonomous Region. Photos of the habitus and copulatory organs are given. In addition, DNA barcode information of the two new species is provided.


Five new species of the long-legged sac spider genus Cheiracanthium C.L. Koch, 1839 (Araneae: Cheiracanthiidae) from China

October 2023

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203 Reads

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5 Citations

European Journal of Taxonomy

Five species of the cheiracanthiid spider genus Cheiracanthium C.L. Koch, 1839 collected from China are diagnosed and described as new to science based on morphological characters: Cheiracanthium arcilongum sp. nov. (♂♀) from Yunnan, C. circulum sp. nov. (♂♀) from Yunnan, C. digitatum sp. nov. (♂♀) from Anhui, C. jiuquan sp. nov. (♂♀) from Guangxi and C. xinjiangense sp. nov. (♂♀) from Xinjiang. In addition, the photos of the habitus, copulatory organs and distribution map are provided for all species. However, DNA barcodes information is only provided for four species.


A novel probe set for the phylogenomics and evolution of RTA spiders

January 2023

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377 Reads

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21 Citations

Cladistics

Spiders are important models for evolutionary studies of web building, sexual selection and adaptive radiation. The recent development of probes for UCE (ultra-conserved element)-based phylogenomic studies has shed light on the phylogeny and evolution of spiders. However, the two available UCE probe sets for spider phylogenomics (Spider and Arachnida probe sets) have relatively low capture efficiency within spiders, and are not optimized for the retrolateral tibial apophysis (RTA) clade, a hyperdiverse lineage that is key to understanding the evolution and diversification of spiders. In this study, we sequenced 15 genomes of species in the RTA clade, and using eight reference genomes, we developed a new UCE probe set (41 845 probes targeting 3802 loci, labelled as the RTA probe set). The performance of the RTA probes in resolving the phylogeny of the RTA clade was compared with the Spider and Arachnida probes through an in-silico test on 19 genomes. We also tested the new probe set empirically on 28 spider species of major spider lineages. The results showed that the RTA probes recovered twice and four times as many loci as the other two probe sets, and the phylogeny from the RTA UCEs provided higher support for certain relationships. This newly developed UCE probe set shows higher capture efficiency empirically and is particularly advantageous for phylogenomic and evolutionary studies of RTA clade and jumping spiders.

Citations (3)


... described from a single female (9) or male (5) (Li & Lin 2016;Li & Zhang 2019;World Spider Catalog 2022). Affirming correct sex matching is one of the challenges for taxonomic studies on Cheiracanthium. ...

Reference:

Five new species of the long-legged sac spider genus Cheiracanthium C.L. Koch, 1839 (Araneae: Cheiracanthiidae) from China
Two new species of the genus Cheiracanthium C. L. Koch, 1839 (Araneae, Cheiracanthiidae) from China

... This genus comprises 220 species, all of which are mainly distributed in the Old World (World Spider Catalog 2024). There are likely many other, as yet undiscovered, species, although have been described from the Asian region in recent years (Zhang et al. 2020;Li & Zhang 2023. ...

Five new species of the long-legged sac spider genus Cheiracanthium C.L. Koch, 1839 (Araneae: Cheiracanthiidae) from China

European Journal of Taxonomy

... Phylogenomic datasets collected over the past decade have allowed the backbone of spider phylogeny to come into focus. Major clades such as Synspermiata, Araneoidea, and the retrolateral tibial apophysis (RTA) Clade, which also have morphological support (e.g., Griswold et al. 1999Griswold et al. , 2005Michalik and Ramírez 2014), are now consistently recovered in multiple phylogenomic analyses (Garrison et al. 2016;Ramírez et al. 2021;Kulkarni et al. 2021;Shao et al. 2023;Zhang et al. 2023). Similarly, the RTA Clade includes several supported subclades, including the Dionycha, Oval Calamistrum Clade (OCC), and the "marronoid" clade. ...

A novel probe set for the phylogenomics and evolution of RTA spiders

Cladistics