Yusuke Kyuragi’s research while affiliated with Kyoto University and other places

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Publications (8)


The Role of Sleep Quality in Mediating the Relationship Between Habenula Volume and Resilience
  • Article

February 2025

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15 Reads

Psychiatry Research

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Yusuke Kyuragi

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[...]

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Schematic overview of the study design
Data acquisition was conducted across four institutions. All treatment groups underwent MRI scanning and clinical assessments three times: once each within 2-week periods before and after treatment (Pre and Post), and once in 6 months after treatment (6MA). Patients were assigned into four treatment groups based on the discretion of their attending psychiatrist. Healthy participants underwent MRI scanning and clinical assessments two times at intervals of 6 or 16 weeks. ECT electroconvulsive therapy, CBT cognitive behavioral therapy, TMS transcranial magnetic stimulation.
Amygdala subdivisions and their baseline volumes
A A representative image of the amygdala parcellation. (Left) Nine nuclei are identified from the FreeSurfer output. (Right) Three clustered subdivisions. The basolateral subdivision consists of the lateral, basal, paralaminar nucleus, and the anterior amygdaloid area. The basomedial subdivision is comprised of the accessory basal nucleus and the cortico-amygdaloid transition area. The centromedial subdivision consists of the central, cortical, and medial nucleus. B Test-retest reliability of the clustered subdivisions. The bilateral centromedial subdivisions showed a mean percentage volume error of >5% and were excluded from further analyses. C Baseline amygdala subdivision volumes of patients with depression and healthy controls. BL Basolateral, BM Basomedial, CM Centromedial, HC Healthy controls. *: P < 0.05 Bonferroni corrected.
Longitudinal changes in amygdala subdivision volumes
A Percentage volume changes of the amygdala subdivisions for each group. B Heatmaps depicting mean percentage volume changes for the ECT group. ECT electroconvulsive therapy, CBT cognitive behavioral therapy, TMS transcranial magnetic stimulation, BL Basolateral, BM Basomedial. *: P < 0.05 Bonferroni corrected.
Association between changes in amygdala volume and anxiety factor score
A (Left) A heatmap depicting the partial correlation coefficients for Pre-to-Post changes. (Right) Scatterplots for Pre-to-Post changes. B (Left) A heatmap depicting the correlation coefficients for Pre-to-6MA changes. (Right) Scatterplots for Pre-to-6MA changes. BL Basolateral, BM Basomedial. *: P < 0.05 Bonferroni corrected.
Association between baseline amygdala volumes and changes in anxiety factor score
A (Left) A heatmap depicting the partial correlation coefficients for Pre-to-Post changes. (Right) Scatterplots for Pre-to-Post changes. B (Left) A heatmap depicting the correlation coefficients for Pre-to-6MA changes. (Right) Scatterplots for Pre-to-6MA changes. BL Basolateral, BM Basomedial. *: P < 0.05 Bonferroni corrected.
Electroconvulsive therapy-specific volume changes in nuclei of the amygdala and their relationship to long-term anxiety improvement in depression
  • Article
  • Full-text available

December 2024

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54 Reads

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1 Citation

Molecular Psychiatry

Electroconvulsive therapy (ECT) is one of the most effective treatments for depression. ECT induces volume changes in the amygdala, a key center of anxiety. However, the clinical relevance of ECT-induced changes in amygdala volume remains uncertain. We hypothesized that nuclei-specific amygdala volumes and anxiety symptoms in depression could explain the clinical correlates of ECT-induced volume changes. To test this hypothesis, we enrolled patients with depression who underwent ECT (N = 20) in this multicenter observational study and collected MRI data at three time points: before and after treatment and a 6-month follow-up. Patients who received medication (N = 52), cognitive behavioral therapy (N = 63), or transcranial magnetic stimulation (N = 20), and healthy participants (N = 147) were included for comparison. Amygdala nuclei were identified using FreeSurfer and clustered into three subdivisions to enhance reliability and interpretability. Anxiety symptoms were quantified using the anxiety factor scores derived from the Hamilton Depression Rating Scale. Before treatment, basolateral and basomedial subdivisions of the right amygdala were smaller than those of healthy controls. The volumes of the amygdala subdivisions increased after ECT and decreased during the follow-up period, but the volumes at 6-month follow-up were larger than those observed before treatment. These volume changes were specific to ECT. Long-term volume changes in the right basomedial amygdala correlated with improvements in anxiety symptoms. Baseline volumes in the right basolateral amygdala correlated with long-term improvements in anxiety symptoms. These findings demonstrate that clinical correlates of ECT-induced amygdala volume changes are existent, but in a nucleus and symptom-specific manner.

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Nuclei-specific abnormalities of amygdala functional connectivity and their changes after multiple types of treatments for depression: a multicenter MRI study

December 2024

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7 Reads

Exploring the neurobiological effects of various treatments for depression is pivotal in elucidating shared and unique mechanisms of action that may explain commonalities and differences in treatment outcomes. The amygdala, consisting of subdivisions with distinct roles in emotional processing, is thought to be implicated in the pathophysiology of depression. However, how various treatments alter nuclei-specific resting-state functional connectivity (rs-FC) of the amygdala remains unclear. Here, we hypothesized that treatments restore nuclei-specific rs-FC abnormalities of the amygdala, with shared and unique changes. To test this hypothesis, this multicenter observational study analyzed functional MRI data of patients with depression (N = 187) and healthy controls (N = 113). Patients were scheduled to undergo either cognitive behavioral therapy (CBT; N = 63), medication therapy (N = 43), electroconvulsive therapy (ECT; N = 32), or transcranial magnetic stimulation (TMS; N = 26). Nine amygdala subregions were delineated using the FreeSurfer segmentation module. To enhance interpretability and reliability, these subregions were further clustered by applying k-means + + clustering to resting-state functional MRI time courses, resulting in three clusters referred to as the basolateral (BL), basomedial (BM), and centromedial (CM) subdivisions based on their anatomical locations. At baseline, the BL and BM subdivisions of patients with depression exhibited hyperconnectivity with the mediodorsal thalamus (MDTH), periaqueductal gray, perigenual anterior cingulate cortex, dorsal raphe nucleus, and dorsomedial prefrontal cortex. Following treatment, there were no shared rs-FC changes across treatment types; however, BL-MDTH connectivity decreased to the level of healthy controls following ECT. These results demonstrate that ECT-specific restoration of rs-FC exists while multiple treatments do not share common rs-FC changes in the amygdala.


Gray and White Matter Microstructural Alterations in Major Depressive Disorder: A Multi-Center Diffusion Imaging Study

October 2024

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37 Reads

Alterations in gray matter (GM) and white matter (WM) microstructure have been implicated in the pathophysiology of major depressive disorder (MDD). While previous neuroimaging studies have primarily focused on WM microstructural changes, limited attention has been given to GM alterations. Additionally, many of these studies concentrate on region-specific associations with symptoms rather than a comprehensive assessment of broader microstructural changes. In this study, we employed neurite orientation dispersion and density imaging (NODDI) and diffusion tensor imaging (DTI) to investigate GM and WM microstructural changes at both whole-brain and regional levels. Data were collected from 159 MDD patients and 112 healthy controls across multiple centers. Our findings revealed significantly increased mean free water fraction (FWF) in GM, elevated mean orientation dispersion index (ODI) in WM, and decreased fractional anisotropy (FA) in WM among MDD patients compared to healthy controls. Furthermore, the mean FA of WM exhibited a negative correlation, and the mean ODI of WM showed a positive correlation with illness duration. No significant correlations were observed between diffusion indices and Hamilton Depression Rating Scale (HAMD-17) scores. Gray matter-based spatial statistics demonstrated increased FWF in several GM regions, including the frontal lobes, temporal lobes, and limbic system. Tract-based spatial statistics revealed widespread reductions in FA across WM in MDD patients. These findings suggest that neuroinflammation and myelin abnormalities may underlie the observed microstructural changes, emphasizing the need for future research to link neuroimaging findings with underlying biological mechanisms of MDD.


Psychological resilience is positively correlated with Habenula volume

August 2024

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78 Reads

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2 Citations

Journal of Affective Disorders


Figure 2. Habenula segmentation using deep learning. (A) Three-dimensional (3D) residual U-Net model architecture, (B) training and testing Dice coefficient curves of the model, (C) example of prediction in 1 participant. T1WI, T1-weighted image.
Figure 4. Habenula volume in the healthy control group. (A) Habenula volume according to the side (left), sex (middle), and left-right and sex (right). (B)
Demographic and Clinical Characteristics of the Participants
Validation Score of the Prediction Model
Segmentation and volume estimation of habenula using deep-learning in patients with depression

April 2024

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67 Reads

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6 Citations

Biological Psychiatry Global Open Science

Background The habenula is involved in the pathophysiology of depression. However, its small structure limits the accuracy of segmentation methods, and the findings regarding its volume have been inconsistent. This study aimed to create a highly accurate habenula segmentation model using deep learning, test its generalizability to clinical magnetic resonance imaging, and examine differences between healthy participants and patients with depression. Methods This multicenter study included 382 participants (patients with depression: N = 234, women 47.0%; healthy participants: N = 148, women 37.8%). A 3-dimensional residual U-Net was used to create a habenula segmentation model on 3T magnetic resonance images. The reproducibility and generalizability of the predictive model were tested on various validation cohorts. Thereafter, differences between the habenula volume of healthy participants and that of patients with depression were examined. Results A Dice coefficient of 86.6% was achieved in the derivation cohort. The test-retest dataset showed a mean absolute percentage error of 6.66, indicating sufficiently high reproducibility. A Dice coefficient of >80% was achieved for datasets with different imaging conditions, such as magnetic field strengths, spatial resolutions, and imaging sequences, by adjusting the threshold. A significant negative correlation with age was observed in the general population, and this correlation was more pronounced in patients with depression (p < 10⁻⁷, r = −0.59). Habenula volume decreased with depression severity in women even when the effects of age and scanner were excluded (p = .019, η² = 0.099). Conclusions Habenula volume could be a pathophysiologically relevant factor and diagnostic and therapeutic marker for depression, particularly in women.


Information flow and dynamic functional connectivity during electroconvulsive therapy in patients with depression

February 2023

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43 Reads

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5 Citations

Journal of Affective Disorders

Background: Electroconvulsive therapy is effectively used for treatment-resistant depression; however, its neural mechanism is largely unknown. Resting-state functional magnetic resonance imaging is promising for monitoring outcomes of electroconvulsive therapy for depression. This study aimed to explore the imaging correlates of the electroconvulsive therapy effects on depression using Granger causality analysis and dynamic functional connectivity analyses. Methods: We performed advanced analyses of resting-state functional magnetic resonance imaging data at the beginning and intermediate stages and end of the therapeutic course to identify neural markers that reflect or predict the therapeutic effects of electroconvulsive therapy on depression. Results: We demonstrated that information flow between the functional networks analyzed by Granger causality changes during electroconvulsive therapy, and this change was correlated with the therapeutic outcome. Information flow and the dwell time (an index reflecting the temporal stability of functional connectivity) before electroconvulsive therapy are correlated with depressive symptoms during and after treatment. Limitations: First, the sample size was small. A larger group is needed to confirm our findings. Second, the influence of concomitant pharmacotherapy on our results was not fully addressed, although we expected it to be minimal because only minor changes in pharmacotherapy occurred during electroconvulsive therapy. Third, different scanners were used the groups, although the acquisition parameters were the same; a direct comparison between patient and healthy participant data was not possible. Thus, we presented the data of the healthy participants separately from that of the patients as a reference. Conclusions: These results show the specific properties of functional brain connectivity.


The Japanese version of the Generalized Problematic Internet Use Scale 2 (GPIUS2): Psychometric evaluation and analysis of the theoretical model

November 2022

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91 Reads

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4 Citations

Background The Generalized Problematic Internet Use Scale 2 (GPIUS2) is a self-administered questionnaire that evaluates problematic internet use (PIU) from a multidimensional perspective. We analysed the psychometric properties and adequacy of the theoretical model of Japanese version of the GPIUS2. Methods This study included 291 healthy Japanese adults (median age = 25 years; interquartile range 22–43 years; 128 women) who completed the GPIUS2 and several other questionnaires evaluating the degree of PIU, self-esteem, depression, and impulsivity. Results Exploratory factor analysis (EFA) revealed a similar factor structure between the original and Japanese versions of the GPIUS2, with only minor differences in item composition. Higher-order confirmatory factor analyses revealed a good overall fit for the factorial model suggested by EFA, indicating adequate construct validity. The model showed acceptable internal consistency. Partial correlation analyses between GPIUS2 and other measures, with age as a control variable, revealed good convergent validity. Finally, structural equation modelling showed a good fit to the data, supporting the cognitive-behavioural model of Caplan (2010). Conclusions The Japanese version of the GPIUS2 has good psychometric properties and the theoretical model of the original GPIUS2 is applicable to Japanese adults.

Citations (5)


... Furthermore, no studies have compared changes in rs-FC associated with different types of treatments, restricting our understanding of the speci c role of the amygdala in the treatment mechanisms. Additionally, since ECT has been shown to increase amygdala volume after treatment and this increase may be associated with treatment outcomes [30][31][32], there is a need to use parcellation methods that can re ect ECT-driven volume changes. ...

Reference:

Nuclei-specific abnormalities of amygdala functional connectivity and their changes after multiple types of treatments for depression: a multicenter MRI study
Electroconvulsive therapy-specific volume changes in nuclei of the amygdala and their relationship to long-term anxiety improvement in depression

Molecular Psychiatry

... Individu dengan tingkat resiliensi tinggi lebih mampu mengelola stres dan mempertahankan kesejahteraan meskipun dalam situasi sulit. Dalam konteks trauma dan PTSD, resiliensi berperan penting dalam pemulihan individu dan kehidupan yang fungsional, dengan faktor individu, sosial, dan lingkungan mempengaruhinya secara dinamis (Dai et al., 2024;Nykonenko, 2023;Wu, 2023). Di Indonesia, ikatan keluarga yang kuat dan kehidupan komunal tradisional sering dianggap sebagai faktor pelindung yang mendorong resiliensi. ...

Psychological resilience is positively correlated with Habenula volume

Journal of Affective Disorders

... In an fMRI study investigating the utility of ketamine in altering neural connectivity, consistent between studies. Known population variants outside of the research aims, such as sex and presumed habenular atrophy with the normal process of aging are controlled for in analyses [63]. Many cited sources of this review report values for the habenula and nearby structures, namely the amygdala, in connectivity, blood flow, and amino acid concentration with careful consideration for anatomical boundaries [64,65]. ...

Segmentation and volume estimation of habenula using deep-learning in patients with depression

Biological Psychiatry Global Open Science

... In addition, a recent study uncovered that the ECs in sensorimotor cortices may serve as a promising and quantifiable candidate marker of depression severity and treatment response (Ray et al., 2021). Another study found that changes in information flow direction from SMN before and after electroconvulsive therapy were significantly correlated with improvement in depressive symptoms in MDD patients (Kyuragi et al., 2023). A small-sample study found that patients with recurrent MDD showed remarkably different effective connections compared to patients with first-episode MDD, especially related to the attention network . ...

Information flow and dynamic functional connectivity during electroconvulsive therapy in patients with depression
  • Citing Article
  • February 2023

Journal of Affective Disorders

... He hypothesizes that a preference for online social interaction and online mood regulation increases the likelihood of developing GPIU. This model has found empirical support in various empirical studies 15,18,[21][22][23][24][25][26] and can be considered as one of the most influential theoretical models in the study of PIU. ...

The Japanese version of the Generalized Problematic Internet Use Scale 2 (GPIUS2): Psychometric evaluation and analysis of the theoretical model