Yujun Xie’s research while affiliated with Zhejiang A & F University and other places

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Publications (4)


Molecular regulatory pathways in which plants perceive elevated temperature
The genes related to rice thermomorphogenesis are divided into three different modules that regulate rice architecture, floral organs and caryopses morphology. The regulation of floral organs is further divided into female and male fertility. Genes within the red box indicate negative regulatory effects on thermomorphogenesis, while the rest have positive regulatory effects
Plant hormone related genes involved in the regulation of rice heat tolerance, divided into five sectors: auxin, cytokinin, gibberellin, abscisic acid, and ethylene. The yellowish layer in the middle represents endogenous heat-associated genes related to plant hormones. The outer light-green layer represents genes induced by exogenous hormone treatment. Black font genes indicate positive regulation of heat tolerance, while red font genes indicate negative regulation of heat tolerance
The theoretical model of heat tolerance of rice source-sink from the point of view of photosynthesis, respiration and transpiration. Under heat stress, protect chloroplasts to ensure normal photosynthesis, enhance ROS scavenging ability to protect cells from oxidative damage, and mediate stomatal opening and closing and development to improve rice water retention capacity. The gene in the green box indicates positive regulation, while the gene in the yellow box indicates negative regulation
How Rice Responds to Temperature Changes and Defeats Heat Stress
  • Literature Review
  • Full-text available

November 2024

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100 Reads

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4 Citations

Rice

Yuan-Hang Xing

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Hongyu Lu

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Xinfeng Zhu

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[...]

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With the intensification of the greenhouse effect, a series of natural phenomena, such as global warming, are gradually recognized; when the ambient temperature increases to the extent that it causes heat stress in plants, agricultural production will inevitably be affected. Therefore, several issues associated with heat stress in crops urgently need to be solved. Rice is one of the momentous food crops for humans, widely planted in tropical and subtropical monsoon regions. It is prone to high temperature stress in summer, leading to a decrease in yield and quality. Understanding how rice can tolerate heat stress through genetic effects is particularly vital. This article reviews how rice respond to rising temperature by integrating the molecular regulatory pathways and introduce its physiological mechanisms of tolerance to heat stress from the perspective of molecular biology. In addition, genome selection and genetic engineering for rice heat tolerance were emphasized to provide a theoretical basis for the sustainability and stability of crop yield-quality structures under high temperatures from the point of view of molecular breeding.

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Photosynthetic pathway, leaf structure of C3 and C4 plants and main improvement methods for C3 plants at present. C3 plants on the left and C4 plants on the right. Blue solid line represents the photosynthetic reaction; blue dotted line represents the transport of substances; black line represents the catalysis of the enzyme; red dots represent major improvement objectives. RuBP, ribulose-1,5-bisphosphate; Rubisco, RuBP carboxylase/oxygenase; PGA, 3-phosphoglycerate; PGAld, 3-phosphoglyceraldehyde; GA, glycollic acid; PEP, Phosphoenolpyruvate; PEPC, Phosphoenolpyruvate carboxylase; OAA, oxaloacetic acid; Mal, malic acid; Pyr, pyruvic acid; NADP-ME, NADP-malic enzyme; PPDK, pyruvate phosphate dikinase; CCM, carbon concentration mechanism.
The era of cultivating smart rice with high light efficiency and heat tolerance has come of age

October 2022

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118 Reads

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3 Citations

How to improve the yield of crops has always been the focus of breeding research. Due to the population growth and global climate change, the demand for food has increased sharply, which has brought great challenges to agricultural production. In order to make up for the limitation of global cultivated land area, it is necessary to further improve the output of crops. Photosynthesis is the main source of plant assimilate accumulation, which has a profound impact on the formation of its yield. This review focuses on the cultivation of high light efficiency plants, introduces the main technical means and research progress in improving the photosynthetic efficiency of plants, and discusses the main problems and difficulties faced by the cultivation of high light efficiency plants. At the same time, in view of the frequent occurrence of high-temperature disasters caused by global warming, which seriously threatened plant normal production, we reviewed the response mechanism of plants to heat stress, introduced the methods and strategies of how to cultivate heat tolerant crops, especially rice, and briefly reviewed the progress of heat tolerant research at present. Given big progress in these area, the era of cultivating smart rice with high light efficiency and heat tolerance has come of age.


Screening of new reference genes for qRT-PCR normalisation in rice under heat stress

May 2022

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42 Reads

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2 Citations

New Zealand Journal of Crop and Horticultural Science

qRT-PCR is one of the widely used methods for analysing the expression levels of specific genes, which requires reliable experimental results with the aid of stably-expressed reference genes. Although there are some common housekeeping genes, many experiments have proved that the expression of these genes can change under different experimental conditions. Heat stress is one of the key factors affecting rice yield and quality, and there are relatively few reports of reference genes that can be used for heat stress research. To find the reference genes that can be stably expressed under heat stress, this experiment analysed 10 common reference genes and 10 new candidate genes by qRT-PCR to explore their expression patterns in rice heat-tolerant variety HT54 and heat-sensitive variety HT13 under heat stress conditions, and used GeNorm, NormFinder, BestKeeper, ΔCT and RefFinder to evaluate the expression stability of these genes. The results showed that LOC_Os06g23160, b-TUB and eIF-4a were the most stably expressed genes in HT13 and combined analysis of these three reference genes are recommended to be used for qRT-PCR normalisation. Our results also showed that LOC_Os06g23160 was an excellent reference gene more stable than common reference genes such as 18S RNA in both HT13 and HT54.

Citations (4)


... Heat stress tolerance in plants is a complex trait governed by a high-complex genetic regulatory network, involving genes responsible for stress sensing, signal transduction, and downstream metabolic responses [1]. In rice, several genes regulating heat tolerance have been identified over the past decade, elucidating a portion of the mechanism underlying the synergistic regulation of heat tolerance [13,40]. We recently showed that High Temperature Sensitive 1 (HTS1), a β-ketoacyl carrier protein reductase functioning in fatty acid biosynthesis, regulates heat tolerance by modulating membrane stability, chloroplast integrity, and stress signaling [41]. ...

Reference:

Rice Cytochrome P450 Protein CYP71P1 Is Required for Heat Stress Tolerance by Regulating Serotonin Biosynthesis and ROS Homeostasis
How Rice Responds to Temperature Changes and Defeats Heat Stress

Rice

... Delayed-type or obstructivetype cold damage seriously affects rice growth, development, and grain filling (Tao et al., 2013). However, current research mainly focuses on the characteristics and mechanisms of the expected impact of rising atmospheric temperatures on C and N distribution in rice field systems , Tang et al., 2022Haas et al., 2022;Xie et al., 2023), while extreme low-temperatures also affect rice growth and lead to differences in the distribution of C and N between rice crops, soil, and atmosphere (Deng et al., 2011). ...

Temperature response of plants and heat tolerance in Rice: A review
  • Citing Chapter
  • January 2023

Advances in Agronomy

... These QTLs have been confirmed to provide a vital function in preserving membrane integrity and yield under HS conditions [95,114]. Moreover, Table 4 contains a list of genes compiled by Shen et al. [115] that may encourage rice plants to resist HS. ...

The era of cultivating smart rice with high light efficiency and heat tolerance has come of age

... However, earlier research revealed that same reference gene are not applicable for all samples so the reference genes needs to be validated in suitable experimental conditions for gene expression research (Gutierrez et al. 2008;Nolan et al. 2006;Chandna et al. 2012). The previous researchs revealed that the stability of reference genes shows variation across plant, cultivar and each developmental stage with respect to biotic and abiotic stress (Xie et al. 2022;Scholtz and visser 2013). Hence it is essential to validate the stability of stable reference genes in a specific experimental condition. ...

Screening of new reference genes for qRT-PCR normalisation in rice under heat stress
  • Citing Article
  • May 2022

New Zealand Journal of Crop and Horticultural Science