Yosi Levi’s research while affiliated with Tel Aviv University and other places

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Publications (4)


Trial profile
a, b Prospective study, c retrospective study.
Extent of reported reactions following vaccination
a Reported symptoms following COVID-19 and influenza vaccination. Error bars represent 95% confidence intervals based on a binomial distribution. b Comparison of self-reported reaction severity for COVID-19 vaccination and influenza vaccination among 621 individuals receiving both vaccines: number and percent of individuals reporting various combinations of no reaction, mild reaction, and severe reaction to the COVID-19 vaccine and influenza vaccine.
Physiological reaction following vaccination
Mean difference in a, b heart rate (in beats per minute [bpm]) and c, d heart rate variability-based stress measure (in points) between the post-vaccination and baseline periods after a, c COVID-19 and b, d influenza vaccinations. Shaded regions represent 95% confidence intervals. bpm refers to beats per minute.
Paired analysis
Daily mean changes in the smartwatch indicators for heart rate and the stress measure. For each participant, this was calculated as the mean change in the indicator (either a heart rate or b heart rate variability-based stress measure) associated with COVID-19 vaccination compared to an individual’s baseline minus the mean change in the indicator associated with influenza vaccination. Error bars represent 95% confidence intervals. bpm refers to beats per minute.
Comparison of physiological and clinical reactions to COVID-19 and influenza vaccination
  • Article
  • Full-text available

August 2024

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32 Reads

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1 Citation

Communications Medicine

Matan Yechezkel

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Yosi Levi

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Background Public reluctance to receive COVID-19 vaccination is associated with safety concerns. By contrast, the seasonal influenza vaccine has been administered for decades with a solid safety record and a high level of public acceptance. We compare the safety profile of the BNT162b2 COVID-19 booster vaccine to that of the seasonal influenza vaccine. Methods We study a prospective cohort of 5079 participants in Israel and a retrospective cohort of 250,000 members of MHS selected randomly. We examine reactions to BNT162b2 mRNA COVID-19 booster and to influenza vaccinations. All prospective cohort participants wore a smartwatch and completed a daily digital questionnaire. We compare pre-vaccination and post-vaccination smartwatch heart-rate data, and a stress measure based on heart-rate variability. We also examine adverse events from electronic health records. Results In the prospective cohort, 1905 participants receive the COVID-19 booster vaccine; 899 receive influenza vaccination. Focusing on those who receive both vaccines yields a total of 689 participants in the prospective cohort and 31,297 members in the retrospective cohort. Individuals reporting a more severe reaction after influenza vaccination tend to likewise report a more severe reaction after COVID-19 vaccination. In paired analysis, the increase in both heart rate and stress measure for each participant is higher for COVID-19 than for influenza in the first 2 days after vaccination. No elevated risk of hospitalization due to adverse events is found following either vaccine. Except for Bell’s palsy after influenza vaccination, no elevated risk of adverse events is found. Conclusions The more pronounced side effects after COVID-19 vaccination may explain the greater concern associated with it. Nevertheless, our comprehensive analysis supports the safety profile of both vaccines.

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Self-reported reactions to the COVID-19 vaccine compared with the influenza vaccine. (A) Percentage of all participants classified into each severity tier based on their most severe reported symptom in the 7 days following vaccination, stratified by vaccine type. Error bars represent 95% CIs. (B) Heatmap showing the proportion of post-vaccination self-reported side effects out of all self-reported reactions for participants who received at least 1 dose of the COVID-19 vaccine. Diagonal cells represent individual side effects and the remainder of cells represent sets of side effects. (C) Heatmap showing the proportion of post-vaccination self-reported side effects out of all self-reported reactions for participants who received at least 1 dose of the influenza vaccine. Diagonal cells represent individual side effects and the remainder of cells represent sets of side effects.
Change in objective and continuous physiologic measurements collected by the smartwatch following COVID-19 and/or influenza vaccine as a function of self-reported side effects. The mean difference in (A) heart rate (in beats per minute), (B) HRV-based stress (in points), and (C) resting heart rate (in beats per minute) between the post-vaccination and baseline periods in Garmin smartwatch data in the 72 h following vaccination. Data information: error bars represent 95% CIs. For each panel, the sample size represents the number of participants for which we had sufficient data points to conduct the analysis, using the criteria presented in the “Materials and methods” section.
Predictive models’ performance. Receiver operating characteristic curves (ROCs) for a prediction model that utilizes data before vaccination (i.e., sociodemographic, questionnaire, and smartwatch data) (green line), and of a detection model that also utilizes smartwatch data 72 h following vaccination (blue line). Mean values and standard errors for sensitivity (SE), and specificity (SP) are reported, considering the point on the ROC with the highest average value of sensitivity and specificity (Youden index).
Model feature importance. Contribution of each feature to the detection of the participant-reported side effects following COVID-19 or influenza vaccinations, stratified by sociodemographic, questionnaire, and smartwatch data.
Prediction and detection of side effects severity following COVID-19 and influenza vaccinations: utilizing smartwatches and smartphones

March 2024

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54 Reads

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6 Citations

Vaccines stand out as one of the most effective tools in our arsenal for reducing morbidity and mortality. Nonetheless, public hesitancy towards vaccination often stems from concerns about potential side effects, which can vary from person to person. As of now, there are no automated systems available to proactively warn against potential side effects or gauge their severity following vaccination. We have developed machine learning (ML) models designed to predict and detect the severity of post-vaccination side effects. Our study involved 2111 participants who had received at least one dose of either a COVID-19 or influenza vaccine. Each participant was equipped with a Garmin Vivosmart 4 smartwatch and was required to complete a daily self-reported questionnaire regarding local and systemic reactions through a dedicated mobile application. Our XGBoost models yielded an area under the receiver operating characteristic curve (AUROC) of 0.69 and 0.74 in predicting and detecting moderate to severe side effects, respectively. These predictions were primarily based on variables such as vaccine type (influenza vs. COVID-19), the individual's history of side effects from previous vaccines, and specific data collected from the smartwatches prior to vaccine administration, including resting heart rate, heart rate, and heart rate variability. In conclusion, our findings suggest that wearable devices can provide an objective and continuous method for predicting and monitoring moderate to severe vaccine side effects. This technology has the potential to improve clinical trials by automating the classification of vaccine severity.


Figure 3. Paired analysis: daily mean changes in the smartwatch indicators for heart rate and the stress measure. For each participant, this 620
Figure S1. The high-level architecture of the PerMed's data collection platform.
Description of cohort participants and self-reported reaction severity after COVID-19 596 booster vaccination and influenza vaccination for individuals receiving both vaccines 597
Comparing reactions to COVID-19 and influenza vaccinations: data from patient self-reporting, smartwatches and electronic health records

June 2023

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34 Reads

Background: Public reluctance to receive COVID-19 vaccination is due in large part to safety concerns. We compare the safety profile of the BNT162b2 COVID-19 booster vaccine to that of the seasonal influenza vaccine, which has been administered for decades with a solid safety record and a high level of public acceptance. Methods: We study a prospective cohort of 5,079 participants in Israel (the PerMed study) and a retrospective cohort of 250,000 members of Maccabi Healthcare Services. We examine reactions to BNT162b2 (Pfizer-BioNTech) mRNA COVID-19 booster vaccinations and to influenza vaccination. All prospective cohort participants wore a Garmin Vivosmart 4 smartwatch and completed a daily questionnaire via smartphone. For the prospective cohort, we compare pre-vaccination (baseline) and post-vaccination smartwatch heart rate data and a stress measure based on heart rate variability, and we examine symptom severity from patient self-reports. For the retrospective cohort, we examine electronic health records (EHRs) for the existence of 28 potential adverse events during the 28-day period before and after each vaccination. Findings: In the prospective cohort, 1,905 participants received COVID-19 vaccination; 899 received influenza vaccination. Focusing on those who received both vaccines yielded a total of 689 participants in the prospective cohort and 31,297 members in the retrospective cohort. Questionnaire analysis: For the COVID-19 vaccine, 39.7% [95% CI 36.4% to 42.9%] of individuals reported no systemic reaction vs. 66.9% [95% CI 63.4% to 70.3%] for the influenza vaccine. Individuals reporting a more severe reaction after influenza vaccination tended to likewise report a more severe reaction after COVID-19 vaccination (r=0.185, p<0.001). Smartwatch analysis: A statistically significant increase in heart rate and stress measure occurred during the first 3 days after COVID-19 vaccination, peaking 22 hours after vaccination with a mean increase of 4.48 (95% CI 3.94 to 5.01) beats per minute and 9.34 (95% CI 8.31 to 10.37) units in the stress measure compared to baseline. For influenza vaccination, we observed no changes in heart rate or stress measures. In paired analysis, the increase in both heart rate and stress measure for each participant was higher (p-value < 0.001) for COVID-19 vaccination than for influenza vaccination in the first 2 days after vaccination. On the second day after vaccination, participants had 1.5 (95% CI 0.68 to 2.20) more heartbeats per minute and 3.8 (95% CI 2.27 to 5.22) units higher stress measure, compared to their baseline. These differences disappeared by the third day after vaccination. EHR analysis: We found no elevated risk of non-COVID-19 or -influenza hospitalization following either vaccine. COVID-19 vaccination was not associated with an increased risk of any of the adverse events examined. Influenza vaccination was associated with an increased risk of Bells palsy (1.3 [95% CI 0.3 to 2.6] additional events per 10,000 people). Interpretation: The more pronounced side effects after COVID-19 vaccination compared to influenza vaccination may explain the greater concern regarding COVID-19 vaccines. Nevertheless, our findings support the safety profile of both vaccines, as the reported side effects and physiological reactions measured by the smartwatches faded shortly after inoculation, and no substantial increase in adverse events was detected in the retrospective cohort. Funding: This work was supported by the European Research Council, project #949850, and a Koret Foundation gift for Smart Cities and Digital Living.


Figure 1. (A) The proportion of individuals who died 3-30 days post-admission to the type of oxygenation aid treatment provided during the first two days post-admission. (B) The proportion of individuals who died 7-30 days post-admission to the type of oxygenation aid treatment provided during the first seven days post-admission. Error bars represent the 95% confidence interval. (C) Daily median oxygenation score of survivors and non-survivors admitted to the hospital. The purple area represents the overlapping between the 95% confidence interval of the "Survivors" and "Non survivors" graphs. (D) The number of days until death as a function of the maximal daily Oxygenation Severity Score (OSS). The light red/blue areas represent the interquartile range.
Figure 2. Predictive models' performance. (A) Mean AUC of a model that utilizes data before hospital admission (i.e., age, gender, and background diseases) and of a model that utilizes data before and during hospitalization (i.e., includes the oxygenation score and blood biomarkers). AUC scores are presented for patients on the day of admission, two days post admission, and seven days post admission. (B) Sociodemographic and background disease, oxygenation, and blood test data and their sequential contribution to the "at admission", "2-days" post admission and "7-days" post admission predictive models.
Oxygenation Severity Score.
Information on hospitalized patients with COVID-19 between 7 March 2020, and 16 March 2021, at Assuta Ashdod Medical Center.
Early Oxygen Treatment Measurements Can Predict COVID-19 Mortality: A Preliminary Study

June 2022

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29 Reads

Halting the rapid clinical deterioration, marked by arterial hypoxemia, is among the greatest challenges clinicians face when treating COVID-19 patients in hospitals. While it is clear that oxygen measures and treatment procedures describe a patient’s clinical condition at a given time point, the potential predictive strength of the duration and extent of oxygen supplementation methods over the entire course of hospitalization for a patient death from COVID-19 has yet to be assessed. In this study, we aim to develop a prediction model for COVID-19 mortality in hospitals by utilizing data on oxygen supplementation modalities of patients. We analyzed the data of 545 patients hospitalized with COVID-19 complications admitted to Assuta Ashdod Medical Center, Israel, between 7 March 2020, and 16 March 2021. By solely analyzing the daily data on oxygen supplementation modalities in 182 random patients, we could identify that 75% (9 out of 12) of individuals supported by reservoir oxygen masks during the first two days died 3–30 days following hospital admission. By contrast, the mortality rate was 4% (4 out of 98) among those who did not require any oxygenation supplementation. Then, we combined this data with daily blood test results and clinical information of 545 patients to predict COVID-19 mortality. Our Random Forest model yielded an area under the receiver operating characteristic curve (AUC) score on the test set of 82.5%, 81.3%, and 83.0% at admission, two days post-admission, and seven days post-admission, respectively. Overall, our results could essentially assist clinical decision-making and optimized treatment and management for COVID-19 hospitalized patients with an elevated risk of mortality.

Citations (2)


... A potentially novel approach to quantifying the totality of an individual's physiologic response to vaccination could be through wearable sensors that can continuously track individual physiologic and behavioral changes following vaccination to create a digital biomarker 11 . Recently, a range of wearable sensors-wrist wearables, rings and torso patches-have been shown to be able to detect the subtle physiologic changes following COVID-19 vaccination [12][13][14][15][16][17][18] . The degree of changes are so small that without knowledge of a person's unique pre-vaccine normal levels and natural variability, the detection of these subtle deviations would not be possible. ...

Reference:

Development of a personalized digital biomarker of vaccine-associated reactogenicity using wearable sensors and digital twin technology
Comparison of physiological and clinical reactions to COVID-19 and influenza vaccination

Communications Medicine

... As much of this prior work has utilized consumer devices, physiologic and behavioral changes following vaccination have mostly been determined based on a single daily summary value for each parameter, with most physiologic measures determined during sleep. Even with this limited data density, multiple studies have found significant associations between postvaccine deviations in physiologic measures, subjective symptoms and humoral immune response 13,20,21 . ...

Prediction and detection of side effects severity following COVID-19 and influenza vaccinations: utilizing smartwatches and smartphones