Yasuto Hoshikawa’s research while affiliated with Tohoku University and other places

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Publications (2)


Figure 3. Molecular dynamics simulations of the interaction between Tim4 mutants and CNT (A) Snapshots of the interaction between Tim4 mutant IgV domains and CNT are shown at the indicated simulation time points. Tim4 mutants are shown in the same way as in Figure 2B. See also Videos S2, S3, S4, and S5. (B) Root-mean-square fluctuation (RMSF) of the Ca atom of WT Tim4, and the indicated mutant was calculated over the MD trajectories. L1-L8 are the large loops in Tim4 shown in Figure 2B. See also Figure S2. (C) Schematic diagram of the tilt angle, which is defined as the angle between the x-y plane and the vector connecting Ca atoms of W119 and G105. (D) Distribution of the tilt angle defined as in (C) is shown over 100 ns MD trajectories. (E) Schematic diagram of the area of interface between Tim4 and CNT. (F) Distribution of the interface area defined as in (E) is shown over 95 ns MD trajectories. See also Figure S4.
Tim4 recognizes carbon nanotubes and mediates phagocytosis leading to granuloma formation
  • Article
  • Full-text available

February 2021

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71 Reads

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29 Citations

Cell Reports

Satoshi Omori

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Misato Tsugita

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Yasuto Hoshikawa

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[...]

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Masafumi Nakayama

Macrophage recognition and phagocytosis of crystals is critical for the associated fibrosis and cancer. Of note, multi-walled carbon nanotubes (MWCNTs), the highly representative products of nanotechnology, induce macrophage NLRP3 inflammasome activation and cause asbestosis-like pathogenesis. However, it remains largely unknown how macrophages efficiently recognize MWCNTs on their cell surfaces. Here, we identify by a targeted screening of phagocyte receptors the phosphatidylserine receptors T cell immunoglobulin mucin 4 (Tim4) and Tim1 as the pattern-recognition receptors for carbon crystals. Docking simulation studies reveal spatiotemporally stable interfaces between aromatic residues in the extracellular IgV domain of Tim4 and one-dimensional carbon crystals. Further, CRISPR-Cas9-mediated deletion of Tim4 and Tim1 reveals that Tim4, but not Tim1, critically contributes to the recognition of MWCNTs by peritoneal macrophages and to granuloma development in a mouse model of direct mesothelium exposure to MWCNTs. These results suggest that Tim4 recognizes MWCNTs through aromatic interactions and mediates phagocytosis leading to granulomas.

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Citations (1)


... [122][123][124] Furthermore, MWCNTs enhance macrophage activation by upregulating CD40 and CD80, stimulating phagocytosis through NLRP3 inflammasome activation via Tim4 receptor recognition. 125,126 Collectively, these NPs contribute to sepsis treatment by modulating inflammatory pathways, enhancing pathogen clearance and maintaining inflammatory balance. Table 2 provides a detailed classification and mechanism overview of macrophage-targeted nanoparticles in sepsis research, highlighting various NP types and their specific roles in modulating macrophage functions. ...

Reference:

Nanolevel Immunomodulators in Sepsis: Novel Roles, Current Perspectives, and Future Directions
Tim4 recognizes carbon nanotubes and mediates phagocytosis leading to granuloma formation

Cell Reports