Yang Zhang’s research while affiliated with Changshu Institute of Technology and other places

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Publications (794)


Plackett‐Burman Design Combined With Response Surface Methodology to Recover Polysaccharides With Cardiovascular Protective Potential From Waste Zizania Latifolia Bract
  • Article

January 2025

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4 Reads

Chemistry & Biodiversity

Lixue Zheng

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Qianfeng Chen

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Xin Zhou

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[...]

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Yang Zhang

Zizania latifolia is the second aquatic vegetable in China. The circular valorization of its waste bracts remains ongoing concern. In this work, the cellulase‐microwave‐assisted extraction (CMAE) of polysaccharides from waste Z. latifolia bracts (PWZLBs) was explored. Seven parameters were selected via single‐factor test, of which three significant parameters were screened out using Plackett‐Burman design, followed by response surface methodology optimization. The optimal CMAE for PWZLBs were: cellulase addition of 0.5%, microwave time of 7 min, and microwave power of 425 W, resulting in a yield of 0.82 ± 0.08%. Four polysaccharide fractions (PWZLBs‐1 ~ 4) were isolated from PWZLBs, of which PWZLBs‐1 accounted for major proportion and exerted higher scavenging capacities on diphenyl picryl hydrazinyl and hydroxyl radicals. More importantly, PWZLBs‐1 elicited anticoagulation via prolonging thrombin time and prothrombin time, exhibiting potential for cardiovascular protection. Various characterizations confirmed that PWZLBs‐1 is a heteropolysaccharide containing uronic acids and sulfates, with galactose (34.3%) as the predominant monosaccharide, and has a molecular weight of 8061 kDa. This work provides clues for the circular valorization of waste Z. latifolia bracts and offers potential opportunities for the development of new cardiovascular protective drugs.


TGP improved pain behaviors in CINP rats and the inhibited the release of inflammatory factors. (A) The chemical structure of TGP. (B–D) The pain behaviors of CINP rats were assessed by the levels of MWT, CPT and TPT. (E) The levels of TNF-α, IL-1β and IL-6 were measured using ELISA kits.
TGP inhibited LPS-induced pyroptosis in LPS-induced BV2 cells. (A,B) Cell viability of BV2 cells was assessed using a CCK-8 kit. (C,D) Pyroptosis of BV2 cells was evaluated by flow cytometry. (E) The protein levels of GSDMD and Caspase-1 were measured by western blot. (F) LDH release of BV2 cells was measured using a LDH release kit. (G,H) The levels of IL-1β and IL-18 were assessed by ELISA kits. NS no significance.
TGP inhibited the expression of KAT2A in LPS-induced BV2 cells. (A) The expression of succinylases KAT2A, KAT3B, SIRT5, SIRT7 and CAPT1 in BV2 cells were measured by qPCR. (B) The 3D structure of molecular docking between KAT2A and TGP. (C) The electrostatic surface of KAT2A. (D) The detail binding mode of KAT2A and TGP. NS no significance.
KAT2A overexpression restored pyroptosis in LPS-induced BV2 cells inhibited by TGP. (A) The expression of KAT2A was assessed by qPCR. (B) Cell viability of BV2 cells was assessed using a CCK-8 kit. (C,D) Pyroptosis of BV2 cells was evaluated by flow cytometry. (E) The protein levels of GSDMD and Caspase-1 were measured by western blot. (F) LDH release of BV2 cells was measured using a LDH release kit. (G,H) The levels of IL-1β and IL-18 were assessed by ELISA kits.
KAT2A activates p38 pathway and promotes p38 succinylation at K295 site. (A) The pathways was identified using a phospho-kinase array in BV2 cells affected by KAT2A knockdown. (B) The protein levels of p38 were assessed by western blot. (C) The interaction between KAT2A and p38 was evaluated by co-IP. (D) The potential succinylation site was predicted by GPSuc database. (E) The protein and the succinylation levels of p38 were measured by western blot.

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Total glucosides of paeony ameliorates chemotherapy-induced neuropathic pain by suppressing microglia pyroptosis through the inhibition of KAT2A-mediated p38 pathway activation and succinylation
  • Article
  • Full-text available

December 2024

Chemotherapy-induced neuropathic pain (CINP) is a prevalent side effect of chemotherapy. Total glucosides of paeony (TGP) have been shown to be effective in pain management. This study aimed to investigate the efficacy and mechanism of TGP in alleviating CINP. Sprague–Dawley rats were treated with oxaliplatin to establish CINP models, and BV2 microglia were exposed to lipopolysaccharides (LPS) to induce pyroptosis. The impact of TGP on CINP was assessed by measuring mechanical withdrawal threshold (MWT), cold pain threshold (CPT), and thermal pain threshold (TPT), as well as inflammatory factor levels. Pyroptosis was evaluated using flow cytometry, lactate dehydrogenase (LDH) release, and pyroptosis marker levels. Quantitative real-time PCR and molecular docking were employed to identify TGP targets, while phospho-kinase arrays, western blotting, and co-immunoprecipitation were used to elucidate the mechanism. Results indicated that TGP increased MWT, CPT, and TPT and inhibited inflammatory factor release in CINP rats. Furthermore, TGP suppressed LPS-induced pyroptosis and downregulated KAT2A expression in BV2 cells; this suppression was reversed by KAT2A overexpression. Mechanistically, KAT2A overexpression activated the p38 pathway and promoted p38 succinylation at K295. KAT2A knockdown inhibited pyroptosis in LPS-induced BV2 cells, an effect that was reversed by the p38 activator metformin. Additionally, the improvements in MWT, CPT, TPT, and inflammatory factor levels observed in CINP rats treated with TGP were negated by KAT2A overexpression. In conclusion, TGP alleviated CINP by suppressing microglial pyroptosis through inhibition of the KAT2A-mediated p38 pathway activation and succinylation. This study provides insights into a potential new therapeutic approach for CINP.

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Fig. 7 (See legend on previous page.)
Fig. 8 TXNIP regulated M1-like microglia transformation via the PI3K/Akt signaling pathway in experimental glaucoma. A Western blotting analysis of the expression of AMPK and PI3K/Akt signaling pathway proteins in microglia from wildtype or distinctive TXNIP-types cultured at 37.5 mmHg. B Glucose uptake of microglia cultured at 37.5 mmHg. C Double immunofluorescent staining of Glut-1 (green) and Iba-1(red) in TXNIP-deficiency microglia pretreated with or without LY294002 cultured at 37.5 mmHg (magnification 100 × , scale bar = 100 μm). D Western blotting analysis of the expression of Glut-1 and M1/M2 cellular markers in TXNIP-deficiency microglia pretreated with or without LY294002 cultured at 37.5 mmHg. E Western blotting analysis of the expression of IL-10, IL-13 and IL-18 in TXNIP-deficiency microglia pretreated with or without LY294002 cultured at 37.5 mmHg. n = 8 per group for immunofluorescent staining and Western blotting. One-way ANOVA was performed. *p < 0.05, **p < 0.01, ***p < 0.001 and ****p < 0.0001, ns, no significance. Bars represent the mean ± SD
Thioredoxin-interacting protein (TXNIP) inhibition promotes retinal ganglion cell survival and facilitates M1-like microglial transformation via the PI3K/Akt pathway in glaucoma

December 2024

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4 Reads

Molecular Medicine

Background Glaucoma is a group of heterogeneous neurodegenerative diseases with abnormal energy metabolism and imbalanced neuroinflammation in the retina. Thioredoxin-interacting protein (TXNIP) is involved in glucose and lipid metabolism, and associated with oxidative stress and inflammation, however, not known whether to be involved in glaucoma neuropathy and its underlying mechanisms. Methods To establish the chronic ocular hypertension (COH) mice model. Western blot, RT-PCR, immunofluorescence and F-VEP were used to detect neuroinflammation level, glial activation and RGCs survival in retina of wild type, TXNIP knockout and MCC950 treatment COH mice. Microglia high-pressure cultured model was constructed. Western blot, RT-PCR and immunofluorescence were used to investigate the proinflammatory cytokines secretion, glucose uptake and phenotype transformation in wild type, TXNIP knockout and overexpressed microglia combined with IL-17A treatment. Finally, we explored the possible underlying mechanisms using relevant pathway inhibitor interventions. Results In this study, for the first time we reported that TXNIP expression was remarkably increased in experimental glaucomatous retina of chronic ocular hypertension (COH) mice, and it was mainly expressed in the ganglion cells layer (GCL). In addition, we found that ablation of TXNIP promoted retinal ganglion cells (RGCs) survival and alleviated visual function impairment in experimental glaucoma. Then, we explored the spatiotemporal consistency between glial activation and retinal inflammation levels in COH mice respectively with TXNIP-deficiency and under treatment of a thermo-containing protein domain 3 (NLRP3) inhibitor MCC950, and the results indicated that TXNIP probably mediated neuroinflammation in glaucomatous retina by activating microglia. Furthermore, upregulation of TXNIP was found in pressure-stimulated microglia, whereas silencing TXNIP facilitated microglial polarization trending towards M1 type and reduced glucose transporter-1 (Glut-1) expression on microglia under high pressure in vitro. Moreover, IL-17A was found to play a role in acting synergistically with TXNIP upon the regulation of microglia polarity transformation. Finally, knockout of TXNIP was revealed to promote PI3K phosphorylation, whereas inhibition of PI3K by LY294002 effectively suppressed Glut-1 expression, glucose uptake, and M1-like transformation tendency in microglia obtained from TXNIP-deficiency mice under high pressure stimulation. Conclusions TXNIP is significantly involved in the inflammation-related neuropathy of experimental glaucoma and probably facilitates M1-like microglial transformation via PI3K/Akt pathway.


Flowchart of study participants. Abbreviations: ICU, intensive care unit; AUD, alcohol use disorder; UTA, unable to assess; MIMIC, Medical Information Mart for Intensive Care
Cumulative incidence curves of delirium and mortality within the ICU for patients with and without alcohol use disorder
Forest plot of the subgroup analysis of the association between alcohol use disorder and the incidence of delirium. Abbreviations: MV, mechanical ventilation; TBI, traumatic brain injury; HR, hazard ratio; CI, confidence interval
Baseline characteristics of participants
Univariate and multivariable competing risk analysis before and after propensity score matching
Association between alcohol use disorder and the incidence of delirium in the intensive care unit: a retrospective cohort study using propensity score matching

December 2024

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2 Reads

BMC Psychiatry

Background Although alcohol consumption is considered one of the risk factors for delirium in intensive care unit (ICU) patients, quantitative research on the association between alcohol use disorder (AUD) and the development of delirium in the ICU remains relatively scarce. Methods This retrospective cohort study was conducted using the Medical Information Mart for Intensive Care-IV database, including all patients admitted to the ICU for the first time and underwent delirium assessment. Patients were divided into AUD and non-AUD groups, with the primary outcome being the occurrence of ICU delirium. Propensity score matching (PSM) was used to balance baseline characteristics between the two groups. The association between AUD and the occurrence of ICU delirium was evaluated using Cox proportional hazards and competing risk models, with sensitivity and subgroup analyses to assess the stability of the results. Results A total of 35,053 patients were included, with 3,455 (9.9%) in the AUD group. The incidence of ICU delirium and ICU mortality were significantly higher in the AUD group compared to the non-AUD group, with a longer median ICU stay. Multivariable Cox regression analysis, adjusting for all covariates, revealed a significant association between AUD and increased risk of ICU delirium (HR 1.59, 95% CI 1.50–1.69, P < 0.01). After PSM, multivariable Cox regression analysis showed consistent results (HR 1.52, 95% CI 1.41–1.65, P < 0.01), and these results remained consistent after performing competitive risk analysis. Conclusions We found a significant correlation between AUD and the incidence of delirium in the ICU, highlighting the importance of assessing and managing the risk of delirium in patients with AUD in the ICU. Clinical trial number Not applicable.


Attention-aware convolutional neural networks for identification of magnetic islands in the tearing mode on EAST tokamak

December 2024

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6 Reads

The tearing mode, a large-scale MHD instability in tokamak, typically disrupts the equilibrium magnetic surfaces, leads to the formation of magnetic islands, and reduces core electron temperature and density, thus resulting in significant energy losses and may even cause discharge termination. This process is unacceptable for ITER. Therefore, the accurate identification of a magnetic island in real time is crucial for the effective control of the tearing mode in ITER in the future. In this study, based on the characteristics induced by tearing modes, an attention-aware convolutional neural network (AM-CNN) is proposed to identify the presence of magnetic islands in tearing mode discharge utilizing the data from ECE diagnostics in the EAST tokamak. A total of 11 ECE channels covering the range of core is used in the tearing mode dataset, which includes 2.5*10^9 data collected from 68 shots from 2016 to 2021 years. We split the dataset into training, validation, and test sets (66.5%, 5.7%, and 27.8%), respectively. An attention mechanism is designed to couple with the convolutional neural networks to improve the capability of feature extraction of signals. During the model training process, we utilized adaptive learning rate adjustment and early stopping mechanisms to optimize performance of AM-CNN. The model results show that a classification accuracy of 91.96% is achieved in tearing mode identification. Compared to CNN without AM, the attention-aware convolutional neural networks demonstrate great performance across accuracy, recall metrics, and F1 score. By leveraging the deep learning model, which incorporates a physical understanding of the tearing process to identify tearing mode behaviors, the combination of physical mechanisms and deep learning is emphasized, significantly laying an important foundation for the future intelligent control of tearing mode dynamics.


Figure 4. Mitochondrial dysfunction induced after 15 mM of chiral amino acids acting on HK-2 cells for 24 h. (A) Representative confocal images of HK-2 cells stained with JC-1 (red and green) and Figure 4. Mitochondrial dysfunction induced after 15 mM of chiral amino acids acting on HK-2 cells for 24 h. (A) Representative confocal images of HK-2 cells stained with JC-1 (red and green) and Hoechst 33342 (blue). Scale bars: 20 µm. (B) Quantification of the level of MMP. (C) Representative confocal images of HK-2 cells stained with BCECF (green) and Hoechst 33342 (blue). Scale bars: 20 µm. (D) Quantification of the extent of cell acidification. (E) Representative confocal images of HK-2 cells stained with Rhod (red) and Hoechst 33342 (blue). Scale bars: 20 µm. (F) Quantification of the concentration of intracellular free Ca 2+ . (Statistical significance relative to control was marked with * p < 0.05, ** p < 0.01, *** p < 0.001, or **** p < 0.0001).
Figure 5. Variable expressions of mitochondria-dependent apoptosis-related proteins induced after 15 mM of chiral amino acids acting on HK-2 cells for 24 h. (A,B) Bax and Bcl-2 protein concentrations. (C) Relative ratio of Bcl-2/Bax protein after normalization. (D) Cyt-C protein content. (E,F) Caspase-9 and Caspase-3 activity. (Statistical significance relative to control was marked with * p < 0.05, ** p < 0.01, *** p < 0.001, or **** p < 0.0001).
Chiral Amino Acids Mediate Mitochondria-Dependent Apoptosis of Human Proximal Tubular Epithelial Cells Under Oxidative Stress

December 2024

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4 Reads

International Journal of Molecular Sciences

Amino acids are the basic structural units of life, and their intake levels affect disease and health. In the case of renal disease, alterations in amino acid metabolism can be used not only as a clinical indicator of renal disease but also as a therapeutic strategy. However, the biological roles and molecular mechanisms of natural chiral amino acids in human proximal tubular epithelial cells (HK-2) remain unclear. In this study, cell viability assays revealed that chiral acidic amino acids (Glu and Asp) and aromatic amino acids (Trp and Phe) inhibited cell growth. The molecular mechanisms indicated that cell growth was closely related to ROS levels. Specifically, chiral Glu, Asp, Trp, and Phe induced oxidative stress and mitochondria-dependent apoptosis in HK-2 cells. This was manifested by elevated levels of intracellular ROS, 8-OHdG, and MDA, increased activities of antioxidant enzymes CAT, SOD, and GPx, decreased mitochondrial membrane potential, increased cytoplasmic Ca2+ concentration, and cell acidification. The expression levels of apoptosis-related molecules Caspase-9, Caspase-3, Cyt-C, and Bax were increased, and the expression level of anti-apoptotic molecule Bcl-2 was decreased. Moreover, L-Glu, D-Asp, L-Trp, and D-Phe exhibited a more pronounced inhibition of cell growth and elicited more substantial alterations in gene expression compared to the other configurations.


Ectopic endometrial stromal cell-derived extracellular vesicles encapsulating microRNA-25-3p induce endometrial collagen I deposition impairing decidualization in endometriosis

December 2024

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4 Reads

Molecular Human Reproduction

Endometrial collagen I undergoes dynamic degradation and remodelling in response to endometrial stromal cell (ESC) decidualization and embryo implantation. However, excessive collagen I deposition in the endometrium during the implantation window may impair decidualization, causing embryo implantation failure in patients with endometriosis (EMS). We found that endometrial collagen I expression during the mid-secretory phase was increased in the EMS group of patients. Collagen I stimulation resulted in decreased expression of the decidualization markers prolactin and insulin-like growth factor binding protein-1 in ESCs, impeding ESC transformation to a decidual morphology and decreasing the blastocyst-like spheroid expansion area in vitro. Treatment with extracellular vesicles (EVs) derived from the ectopic ESCs of EMS patients (EMS-EVs) increased collagen I expression in vivo and in vitro and decreased the blastocyst-like spheroid expansion area. Furthermore, EV microRNA (miRNA) sequencing revealed that there were 40 upregulated and 77 downregulated miRNAs in EMS-EVs when compared to the EVs derived from ESCs in the endometrium of control patients (CTL-EVs), including increased expression of miR-25-3p that targets phosphatase and tensin homolog (PTEN). We also found that PTEN expression was decreased and p-Akt expression was increased in the endometrium of EMS patients and EMS-EV-treated ESCs. miR-25-3p transfected ESCs exhibited increased collagen I, decreased PTEN, and increased p-Akt. Additionally, an EV uptake study further showed that EMS-EVs were preferentially taken up by ESCs rather than by endometrial epithelial cells. These results suggest that EMS-EVs encapsulating miR-25-3p might be preferentially taken up by eutopic ESCs where they may induce endometrial collagen I deposition to impair ESC decidualization in EMS.




Measurement of CO2 Column Concentration Above Cloud Tops With a Spaceborne IPDA Lidar

November 2024

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70 Reads

Plain Language Summary For global greenhouse gas monitoring, passive remote sensing technology has consistently struggled to balance the reliability and usability of monitoring data in cloudy regions. The AEMS employs 1,572 nm IPDA lidar technology for active remote sensing of global XCO2, enabling effective processing and utilization of cloud echo data. In this study, we focused on the concentrations of CO2 columns using cloud top echoes and performed a preliminary comparison of cloud top XCO2 results with related data products from the passive satellite OCO‐2 and CarbonTracker. By quantifying the difference in CO2 concentration between two altitude layers above the sea surface, we assessed ocean carbon absorption capacity, and the results demonstrated high reliability. This work highlights the significant advantages of spaceborne IPDA lidar in global CO2 measurement, cloud echo data processing, and ocean carbon flux assessment, providing valuable data support for climate change research.


Citations (33)


... there is a considerable amount of literature on the clinical characteristics and prognostic factors of sFts, including several studies on mortality prediction models. Most of these studies analyze baseline characteristics based on cross-sectional data collected at the time of admission [21][22][23][24][25]. some studies present mortality risk and the weight of different variables in prognosis assessment using nomograms [21,24]. ...

Reference:

Identification of early prognostic biomarkers in Severe Fever with Thrombocytopenia Syndrome using machine learning algorithms
Development and validation of a clinical and laboratory-based nomogram to predict mortality in patients with severe fever with thrombocytopenia syndrome

BMC Infectious Diseases

... The PI3K/AKT, RAS/ MAPK, RTK, and TSC/mTOR pathways may be inhibited by NFKBIE, according to genomic cancer analyses. Furthermore, B-cell immune infiltration was substantially correlated with NFKBIE [59]. Vascular haemophilic factor (vWF) is a potent regulator of angiogenesis, tumour growth, and metastasis, as well as a critical regulator of primary haemostasis [60]. ...

NFKBIE is a predictive factor of survival and is correlated with immune infiltration and antigen processing and presentation in hepatocellular carcinoma

Oncology Letters

... It can also effectively increase community engagement and compliance. In addition, social media platforms allow for direct engagement with the public, offering a means for authorities to address concerns, debunk misconceptions, and deliver timely health guidance [195]. Collecting and analyzing vast amounts of data from social media allows for identifying at-risk populations, leading to more targeted and fair health interventions. ...

Detecting Social Media Rumor Debunking Effectiveness During Public Health Emergencies: An Interpretable Machine Learning Approach
  • Citing Article
  • July 2024

Science Communication

... The association between diabetes and delirium was confirmed in elderly patients with hip fracture [45][46][47][48][49] and in major orthopedic surgery [50]. In addition, diabetes had a significant role in the construction of predictive models for delirium onset [51,52]. ...

Predicting the Risk of Postoperative Delirium in Elderly Patients Undergoing Hip Arthroplasty: Development and Assessment of a Novel Nomogram
  • Citing Article
  • July 2024

... Moreover, when the number of mesh elements reaches a certain threshold, the improvement in computational accuracy becomes less pronounced. Therefore, to ensure computational efficiency while pursuing accurate numerical calculations, it is necessary to conduct grid independence verification (Yang and Fang 2023;Sun et al. 2024b). The intricate mesh weave pattern affects the quality of grid partitioning, which in turn influences the accuracy of calculations. ...

Rock Breaking Mechanism of Saddle PDC Cutters and Analysis of Mixed Cutter Layouts

... This is consistent with the understanding that AST, being partially localized in mitochondria, is more indicative of severe and chronic liver damage, where mitochondrial dysfunction plays a key role [27]. The combination of elevated ALT and AST [28], particularly when the AST/ALT ratio exceeds 1, has been suggested as a marker for more advanced fibrosis, reflecting the extent of hepatocellular injury and the fibrotic response. This ratio's significance in predicting fibrosis underscores the need for comprehensive liver function assessment in pediatric CHB patients, particularly in those with prolonged disease duration or higher viral loads. ...

Non-Invasive Monitoring of the Impact of Low-Level Viremia on Liver Fibrosis in Treated Chronic Hepatitis B Patients

... Thank you for informing us about the letter discussing our recently published research results of "Analgesic Effectiveness of Truncal Plane Blocks in Patients Undergoing the Nuss Procedure: A Randomized Controlled Trial" [1]. Meanwhile, we would like to thank Professor G.Y. Yang et al. for their kind comments about our research. ...

Analgesic Effectiveness of Truncal Plane Blocks in Patients Undergoing the Nuss Procedure: A Randomized Controlled Trial

Pain and Therapy

... Cardiovascular diseases (such as hypertension, diabetes, and high cholesterol) have been significantly associated with the development of Alzheimer's disease. The health status of the cardiovascular system affects blood and oxygen supply to the brain, thereby influencing the function and survival of neural cells [7]. ...

Diabetes accelerates Alzheimer's disease progression in the first year post mild cognitive impairment diagnosis

... miRNA-455 shows the capacity to regulate numerous immune related genes such as CXCL1,2 and 8. 84 In addition, the role of TGF-β this key regulator has been studied in glaucoma as well: miR-146 has been shown to modulate fibrosis by inhibiting TGF-β regulated myofibroblast transdifferentiation, while miR-29 family strongly inhibits the TGF-β pathway and therefore the deposition of extracellular matrix both at conjunctival and trabecular levels. 30,73 A large body of evidence have indicated that the TGF-β is also involved in systemic fibrotic diseases and is broadly influenced by miRNAs. miR-21, miR-29 family, miR-101, miR-29, miR-200, miR-942, and miR-193, can impact various fibrotic conditions through the regulation of TGF-β signaling pathway. ...

MiR-146a reduces fibrosis after glaucoma filtration surgery in rats

Journal of Translational Medicine

... Severe hypertension has been associated with Bell's palsy, particularly in pediatric populations (Jörg et al., 2013), as well as with type 2 diabetes mellitus (Romadhoni et al., 2024). The pathophysiological mechanisms underlying this association are not entirely understood but may involve vascular and metabolic disturbances that predispose individuals to facial nerve ischemia (Liu et al., 2023;Wang et al., 2024). In this case report, the patient's hypertensive crisis (185/144 mmHg) posed a dual challenge: managing the acute facial paralysis while simultaneously addressing the severe elevation in blood pressure. ...

Effects of acupuncture for Bell’s palsy patients in the acute phase and its impact on facial nerve edema: a study protocol for a randomized, controlled trial