Yan Wang’s research while affiliated with Hefei University of Technology and other places

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Publications (492)


Ti-O-Mo bond-bridged PMA@MIL-125-NH2 photocatalyst for gas acetone photocatalytic degradation
  • Article

June 2025

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7 Reads

Applied Catalysis B Environmental

Shijie Yang

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Guanqing Song

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SH3GL1 promotes diffuse large B‐cell lymphoma (DLBCL) cell proliferation and in vivo tumour formation. (A, B) Depmap database showed SH3GL1 is an essential gene in non‐Hodgkin lymphoma cell lines compared with other cancer cell lines (https://depmap.org/portal/). (C) Immunoblot analysis showed high expression of SH3GL1 protein in mantle cell lymphoma (MCL), DLBCL, Burkitt's lymphoma (BL), chronic leukaemia (CLL) and anaplastic large cell lymphoma (ALCL) cell lines. (D) Immunoblot analysis showed the efficacy of SH3GL1 knockout in Cas9+ FARAGE and Cas9+ SUDHL8 expressing non‐targeting control (C) or sgRNA targeting SH3GL1 expression. (E) Flow cytometry analysis of cell death was measured using Propidium iodide (PI) Kit in FARAGE and SUDHL8 at day 7 postexpression of control or sgRNAs targeting SH3GL1. (F) Growth curve analysis of FARAGE and SUDHL8 expressing control or SH3GL1 sgRNAs was performed at day 5 post‐sgRNA expression. (G) The efficacy of SH3GL1 knockout in FARAGE and SUDHL8 xenograft mouse was confirmed by immunoblot analysis. (H, I) Volume analysis (H) and growth curve analysis (I) of tumour in SH3GL1 wild‐type and SH3GL1 knockout group in FARAGE and SUDHL8 xenograft mouse model (n = 5 per group). Data are shown as the mean ± SD. * p < .05; ** p < .01; *** p < .001; **** p < .0001 using one‐way analysis of variance (ANOVA) with multiple comparisons.
SH3GL1 is overexpressed in human diffuse large B‐cell lymphoma (DLBCL) and associated with prognosis. (A) Representative images of different levels of SH3GL1 expression in DLBCL tumour tissues by immunohistochemistry was shown; n = 126. (B) Distribution of SH3GL1 staining by different expression levels. (C, D) Progression‐free survival (PFS) and overall survival (OS) of DLBCL patients based on SH3GL1 expression in 126 DLBCL tumour tissues. (E, F) PFS and OS of DLBCL patients with different expression levels of SH3GL1 in 126 DLBCL tumour tissues. (G, H) Multivariate Cox analysis of PFS and OS for 126 DLBCL patients. (I) Distribution of different levels of SH3GL1 expression in DLBCL patients with progression disease (PD). (J) Multivariate Cox analysis of PD for 126 DLBCL patients. Data are shown as the mean ± SD. * p < .05; ** p < .01; *** p < .001; **** p < .0001 using one‐way analysis of variance (ANOVA) with multiple comparisons.
Positive correlation between SH3GL1 and ferroptosis signalling in diffuse large B‐cell lymphoma (DLBCL) cells. (A) Volcano plot of downregulated and upregulated gene sets enriched in FARAGE expressing control or SH3GL1 sgRNAs by Deep Data‐independent acquisition (Deep‐DIA). (B) Unsupervised hierarchical clustering heatmap of top 10 upregulated and top 10 downregulated proteins enriched in Cas9+ FARAGE that express control or SH3GL1 sgRNAs by Deep‐DIA. (C‐D) Gene Set Enrichment Analysis (GSEA) analysis of pathways enriched in ferroptosis (C) and autophagy (D) in Cas9+ FARAGE that express control or SH3GL1 sgRNAs by Deep‐DIA. (E) Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment scatter plot analysis of pathways enriched in ferroptosis in Cas9+ FARAGE that express control or SH3GL1 sgRNAs by Liquid chromatography–mass spectrometry (LC–MS). (F) Quantitative reverse transcription polymerase chain reaction (RT‐qPCR) analysis of TFRC, NCOA4, ferritin heavy chain 1 (FTH1) and GPX4 expression in FARAGE expressing control or SH3GL1 sgRNA. (G) Immunoblot analysis of TFRC, GPX4 and FTH1 expression in FARAGE and SUDHL8 expressing control or SH3GL1 sgRNA. (H) Immunoblot analysis of TFRC, GPX4 and FTH1 expression in FARAGE and SUDHL8 with control GFP and SH3GL1 cDNA. (I) Immunohistochemical (IHC) analysis of GPX4, NCOA4, FTH1 and TFRC expression in the subcutaneous tumour of FARAGE and SUDHL8 xenograft mouse model which express control or SH3GL1 sgRNAs. Brown signal in IHC was considered as positive staining. Data are shown as the mean ± SD. * p < .05; ** p < .01; *** p < .001; **** p < .0001 using one‐way analysis of variance (ANOVA) with multiple comparisons.
Knockout of SH3GL1 increases ferroptosis in diffuse large B‐cell lymphoma (DLBCL) cells. (A–C) FARAGE and SUDHL8 that express control or sgSH3GL1 were treated with DFO (3 µmol/L) and FER1 (1 µmol/L) for 48 h. Cell death (A) was assessed by PI stating followed by flow cytometry. Whole cell lysate was obtained to detect MDA levels (B) by microplate reader (OD 532 nm). Cells were stained with BODIPY 581/591 C11 and lipid reactive oxygen species (ROS) production (C) was assessed by flow cytometry. (D, E) Flow cytometry analysis of cellular ROS levels (D) and immunofluorescence analysis of cellular ferrous iron (E) in FARAGE and SUHDL8 expressing control or sgSH3GL1. (F) Transmission electron microscopy (TEM) analysis of mitochondria in subcutaneous tumour of a xenograft mouse model which was constructed by using FARAGE and SUDHL8 cells following control or SH3GL1 sgRNAs expression. Red arrow: normal mitochondria. Yellow arrow: damaged mitochondria (mitochondria with swelling, broken cristae and vacuolation). (G) Mitochondrial membrane potential (MMP) analysis in FARAGE and SUDHL8 expressing control or SH3GL1 sgRNAs without or with 1 µmol/L CCCP for 24 h by JC‐1. Data are shown as the mean ± SD. * p < .05; ** p < .01; *** p < .001; **** p < .0001 using one‐way analysis of variance (ANOVA) with multiple comparisons.
Ferritin heavy chain 1 (FTH1) is a key determinant for the loss of SH3GL1‐induced ferroptosis. (A) Immunoblot analysis showed the efficacy of FTH1 knockout in Cas9+ FARAGE and Cas9+ SUDHL8 expressing non‐targeting control (C) or sgRNA targeting FTH1 expression. (B) Growth curve analysis of FARAGE and SUDHL8 expressing control or FTH1 sgRNAs was performed at day 5 post‐sgRNA expression. (C–F) FARAGE and SUDHL8 that express control or sgFTH1 were treated with DFO (3 µmol/L) and FER1 (1 µmol/L) for 48 h. Cell death (C) was assessed by PI stating followed by flow cytometry. Whole cell lysate was obtained to detect MDA levels (D) by microplate reader (OD 532 nm). Cells were stained with BODIPY 581/591 C11 and lipid reactive oxygen species (ROS) production (E) was assessed by flow cytometry. (F) Flow cytometry analysis of cellular ROS levels in FARAGE and SUHDL8 expressing control or sgFTH1. (G) Coimmunoprecipitation analysis of SH3GL1 and FTH1 in FARAGE and SUDHL8. (H) Immunoblot analysis of GPX4 expression in FARAGE and SUDHL8 cells with SH3GL1 overexpression following FTH1 knockout. (I, J) Flow cytometry analysis of lipid ROS and cellular ROS production in FARAGE and SUDHL8 cells with SH3GL1 overexpression following FTH1 knockout. Data are shown as the mean ± SD. * p < .05; ** p < .01; *** p < .001; **** p < .0001 using one‐way analysis of variance (ANOVA) with multiple comparisons.

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SH3GL1‐activated FTH1 inhibits ferroptosis and confers doxorubicin resistance in diffuse large B‐cell lymphoma
  • Article
  • Full-text available

March 2025

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30 Reads

Background Diffuse large B‐cell lymphoma (DLBCL) is predominant subtype of non‐Hodgkin lymphoma and can be effectively treated. Nevertheless, a subset of patients experiences refractory or relapsed disease, highlighting the need for new therapeutic strategies. Methods Depmap database based on CRISPR/Cas9 knock out analysis was employed to identify the essential gene SH3GL1, which encodes endophilin A2, as crucial for the proliferation and survival of DLBCL cells. Immunohistochemistry (IHC) staining was performed on the 126 paraffin‐embedded clinical DLBCL samples to investigate the association between SH3GL1 expression levels and the prognosis. To investigate the specific mechanism modulated by SH3GL1 in the progression of DLBCL, an integrative approach was employed. This approach combined high‐throughput sequencing technologies, such as Deep‐DIA and LC‐MS, with functional validation techniques, including CRISPR/Cas9 gene editing, xenograft models, and molecular pathway analyses. Results Our study found that high expression levels of SH3GL1 correlate with poor prognosis in a cohort of 126 newly diagnosed DLBCL patients, underscoring its significance in disease progression. Mechanistically, we found that SH3GL1 deficiency triggers ferritin heavy chain 1 (FTH1)‐mediated ferroptosis, specifically ferritinophagy‐induced ferroptosis, in DLBCL cells. Additionally, high expression of SH3GL1 suppresses doxorubicin‐induced ferroptosis. Cancer cells' resistance to conventional therapies is associated with increased sensitivity to ferroptosis. Conclusions These findings emphasise SH3GL1 as a promising prognostic biomarker and a potential therapeutic target in DLBCL, offering new avenues for treatment strategies aimed at overcoming drug resistance and improving patients' outcomes. Key points Elevated SH3GL1 expression in DLBCL patients was associated with a negative prognosis. SH3GL1 plays a crucial role in promoting DLBCL cell survival through the regulation of FTH1‐mediated ferroptosis and doxorubicin resistance.

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Xiao‐Chai‐Hu‐Tang Ameliorates Depressive Symptoms via Modulating Neuro‐Endocrine Network in Chronic Unpredictable Mild Stress‐Induced Mice

February 2025

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4 Reads

Objective Xiao‐Chai‐Hu‐Tang (XCHT) has been demonstrated to exert an antidepressant effect during long‐term clinical practices. However, the potential mechanisms of XCHT remain unknown. This study aims to investigate the effect of XCHT on chronic unpredictable mild stress‐induced mice with depressive‐like behaviors and to explore the underlying mechanisms. Methods The active compositions and potential related targets of XCHT in the brain were obtained through UPLC‐Q‐TOF‐MS, network pharmacology, and bioinformatics analyses, verified by experimental validation. Then, the protein–protein interaction (PPI), Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses, and molecular docking were used to predict the core targets and mechanisms of XCHT on depression. After being treated with XCHT standard decoction, based on enzyme‐linked immunosorbent assay (ELISA), non‐targeted metabolism, targeted LC–MS analyses, RNA‐seq, quantitative RT‐PCR, immunofluorescence, and western blotting were determined to clarify the mechanism of XCHT in the treatment of anxiety and depression disorder. Results In total, 166 active ingredients and 525 related targets of XCHT were detected and selected from the network databases. The inflammatory response and metabolism of neurotransmitters were the main related signaling pathways predicted by KEGG enrichment analyses. Behavioral testing shows that XCHT has antidepressant effects, and untargeted metabolomic studies showed it significantly reduced levels of the neurotoxic substance quinoline acid. Combining the results of molecular docking, RNA‐seq, and western blot revealed that XCHT regulated nerve regeneration via BDNF/TrkB/CREB and PI3K/AKT signaling pathways. Immunofluorescence analysis revealed that XCHT downregulated the chronic stress‐induced activation of microglia and astrocytes in the hippocampus. Conclusion XCHT exerts antidepressant functions by modulating neuroinflammation and neuroregeneration.


Anatomic characteristics of the lacrimal sac and adjacent bony structures–a computed tomographic-dacryocystography research

February 2025

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3 Reads

International Journal of Ophthalmology

AIM: To describe the anatomic characteristics of the lacrimal sac and its adjacent bone structures and to provide surgical recommendations for endoscopic dacryocystorhinostomy (EN-DCR). METHODS: This retrospective comparative study involved 118 sides with complete nasolacrimal duct obstruction and 83 unaffected sides from 126 patients. Computed tomographic-dacryocystography (CT-DCG) scans were performed before lacrimal surgery, and image reconstruction was used to obtain continuous 0.75-mm axial, coronal, and segmental sections for review. The morphology of the lacrimal sac and its relationship with adjacent bony structures were determined for measurement, as well as the obstructed location. RESULTS: The height of the lacrimal sac was 12.99±2.10 mm in this study. The operculum of the middle turbinate (OMT) was located vertically in the lower third of the lacrimal sac. Horizontally, the junction between the maxillary bone and the lacrimal bone (MB-LB) was close to, mostly (60.2%) posterior to, the lacrimal sac. The uncinate process was more frequently attached to the lacrimal bones (75.1%). The obstructions were generally located around the entrance of the nasolacrimal duct (NLD). However, some were placed higher, with 7.63% blocked not lower than the OMT. There was a negative correlation between the diameter of the lacrimal sac and the level of obstruction (r= -0.35, P<0.01). CONCLUSION: In this study, the OMT and MB-LB can be served as the landmarks in EN-DCR. Partial uncinectomy should be performed in most cases. The obstructions were generally located around the entrance of the NLD, but some extreme individual variations strongly implies the importance of CT-DCG scanning before surgery.


Behavioral Abnormalities, Cognitive Impairments, Synaptic Deficits, and Gene Replacement Therapy in a CRISPR Engineered Rat Model of 5p15.2 Deletion Associated With Cri du Chat Syndrome

February 2025

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17 Reads

The Cri du Chat Syndrome (CdCS), a devastating genetic disorder caused by a deletion on chromosome 5p, faces challenges in finding effective treatments and accurate animal models. Using CRISPR‐Cas9, a novel CdCS rat model with a 2q22 deletion is developed, mirroring a common genetic alteration in CdCS patients. This model exhibits pronounced deficits in social behavior, cognition, and anxiety, accompanied by neuronal abnormalities and immune dysregulation in key brain regions such as the hippocampus and medial prefrontal cortex (mPFC). The immunostaining and RNA‐seq analyses provide new insights into CdCS pathogenesis, revealing inflammatory and immune processes. Importantly, it is demonstrated that early gene replacement therapy with AAV‐Ctnnd2 alleviates cognitive impairments in CdCS rats, highlighting the potential for early intervention. However, the effectiveness of this therapy is confined to the early developmental stages and does not fully restore all CdCS symptoms. The findings deepen the understanding of CdCS pathogenesis and suggest promising therapeutic directions.


Citations (17)


... The importance of this issue in previous years is well-documented. There has been a lot of scientific work conducted on optimizing the geometric configuration of heat exchangers [3,4]. The geometrical layout of the heat exchanger is pivotal to its thermally and hydraulically superior performance [5]. Lee and Yun [6] conducted a thorough analysis of the heat exchanger's slit fins, examining the friction of fluid flow with precision. ...

Reference:

In the Study of the Effects of the Pipe Design of a Heat Exchanger on the Thermo-Fluid Characteristics and Exergy Destruction
Uniform temperature and flow fields for the energy-storage-heat-exchanger: The role of a novel cyclone mixer
  • Citing Article
  • January 2025

Journal of Energy Storage

... However, its poor stability and pH sensitivity hinder its use as a functional food ingredient. Various strategies, including emulsion [19], liposome [20], and microencapsulation [21,22], have been developed to improve its stability and bioavailability in foods. In emulsions, dissolving AST in the oil phase with a large surface area can improve its dissolution and absorption [23]. ...

Chitin nanocrystal Pickering emulsions for sustainable release pesticide microencapsulation with superior leaf adhesion and enhanced safety
  • Citing Article
  • November 2024

Chemical Engineering Journal

... Emerging hybrid approaches combine linguistic reasoning with physical constraints. Chen et al. [20] developed Async-Driver with decoupled 2Hz LLM/20Hz planner operation, reducing computational load by 63%. Long et al. [21] integrated VLMs with MPC to improve safety margins by 38% in adverse conditions through visual-language parameter generation. ...

Asynchronous Large Language Model Enhanced Planner for Autonomous Driving
  • Citing Chapter
  • October 2024

... In their paper, Li et al. 1 embarked in the understanding of the determinants of evolution to myelodysplastic syndrome (MDS) and acute myeloid leukaemia (AML) in patients with aplastic anaemia (AA) and paroxysmal nocturnal haemoglobinuria. The authors specifically focused on patients undergoing allogeneic haematopoietic cell transplant (allo-HCT) to study outcomes and differences with patients with AA receiving transplant upfront before progressing to MDS/ secondary AML (sAML). ...

Clinical and genetic profiles and outcomes of allogeneic haematopoietic stem cell transplantation in secondary myelodysplastic syndrome following aplastic anaemia

... Recent studies have used various p-type semiconductors, including CuAl2O4 [152], NiO [153], Mn3O4 [154], and BiOI [155], for constructing p-n heterojunctions with g-C3N4. ...

Revealing the reaction mechanism of the novel p-n heterojunction Mn3O4-C3N4 in efficient activation of chlorite to degrade organic pollutants under piezoelectric catalysis
  • Citing Article
  • October 2024

Applied Catalysis B Environmental

... Borates and derivatives, especially phenylborate, serve as a key chemical functional group in cells with ROS reactivity [23,24]. Yang et al. covalently modified maltodextrin (MD) with 4-(hydroxymethyl) phenylboronic acid pinacol ester to prepare ROS-responsive MD-prodrugs, which were internalized and degraded back to MD, reactivating dormant bacteria and increasing their sensitivity to rifampicin [25]. Zhao et al. developed and synthesized a polymeric prodrug, polyglutamic acid modified with 4-hydroxymethyl phenylboronic acid caffeic acid ester (PBC). ...

Maltodextrin-derived nanoparticle resensitizes intracellular dormant Staphylococcus aureus to rifampicin
  • Citing Article
  • October 2024

Carbohydrate Polymers

... Further exploration of DL techniques led to a neural network ensemble (NNE) approach, which differentiated benign from malignant lung nodules, achieving an accuracy of 78.7%-a significant improvement over individual classifiers [21]. Similarly, the LUNA-16 challenge, initiated in 2011, leveraged raw CT scans to predict lung nodules by localizing their occurrence and assessing their likelihood within specified regions [22,23]. ...

Precision patient selection for improved detection of circulating genetically abnormal cells in pulmonary nodules

... Treatment with MSC-EVs increased the levels of IL-10, a marker of M2 macrophages in colitis, downregulated inflammatory responses, maintained intestinal mucosal integrity, and alleviated intestinal fibrosis 67 . He et al. 68 found that MSC-EVs exerted their therapeutic efficacy by downregulating intestinal inflammation and apoptosis and promoting cell proliferation through the miR-455-5p/SOCS3/Stat3 pathway in radiation-induced intestinal injury. Other types of EVs also exert therapeutic effects on enteritis. ...

Mesenchymal stem cell-derived extracellular vesicles targeting irradiated intestine exert therapeutic effects

Theranostics

... Recent studies provide additional evidence supporting these observations. Latest study demonstrated that aged microplastics exacerbate bioenergetic imbalances and oxidative stress, suggesting that chronic exposure to fragmented plastics like PET-MPs could intensify their toxic effects in vivo 33 . Similarly, it has been reported the genotoxic and neurotoxic potential of nanoplastics, underscoring the broader systemic risks associated with prolonged exposure to MPs 34 . ...

Aged fragmented-polypropylene microplastics induced ageing statues-dependent bioenergetic imbalance and reductive stress: In vivo and liver organoids-based in vitro study
  • Citing Article
  • August 2024

Environment International

... Recent investigations have endeavored to improve the therapeutic efficacy against HCC by inducing glucose deprivation to facilitate the demise of CSCs [17], highlighting the potential involvement of disulfidptosis in the stemness of HCC. Moreover, a novel prognostic model also indicates that a high hepatic arterial blood supply is significantly associated with poorer overall survival (OS) in HCC patients [18]. Nevertheless, there are still unmet needs for genetic markers to monitor prognostic outcomes and direct treatment options for HCC patients [19,20]. ...

Portal Venous and Hepatic Arterial Coefficients Predict Post-Hepatectomy Overall and Recurrence-Free Survival in Patients with Hepatocellular Carcinoma: A Retrospective Study