Xiuxian Liu’s research while affiliated with Chinese Academy of Forestry and other places

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Publications (8)


Features of Luculia gratissima “Xiangfei” and the overview of greenhouses under two different photoperiods. (A) Whole plant of L. gratissima “Xiangfei.” (B) Flowers of L. gratissima “Xiangfei.” (C) Greenhouse under night-break treatment. (D) Greenhouse under short-day photoperiod.
Luculia gratissima morphological and histological characteristics, shoot apexes at five time points upon short-day treatment. (A–C) Vegetative buds in the undifferentiated stage (SD0 to SD7). (D–F) Bract primordial differentiation stage (SD10). (G–I) Inflorescence primordial differentiation stage (SD13). (J–L) Floret primordial differentiation stage (SD19). (A,B,D,G,H) Histological images obtained from paraffin-embedded sectioned samples (scale bar: 100 μm). (E,J,K) Histological images obtained from paraffin-embedded sectioned samples (scale bar: 50 μm). (C,F,I,L) The external morphology of shoot apexes at different developmental stages (scale bar: 5 mm). BP, bract primordia; FP, floret primordia; IP, inflorescence primordia; LIP, lateral inflorescence primordium; LP, leaf primordia; and VC, vegetative cone.
Luculia gratissima endogenous soluble sugar content and hormonal changes, shoot apexes and leaves at five stages upon short-day treatment. The y-axis shows soluble sugar and four hormones, and the x-axis shows the average relative abundance of the endogenous soluble sugars and hormones. Colored columns represent different developmental stages. *0.01 < p ≤ 0.05; **0.001 < p ≤ 0.01.
Weighted co-expression network analysis of 1,226 DEGs at four developmental stages of L. gratissima, short- or long-day treatments. (A) Hierarchical cluster tree showing the co-expression modules, with each tree leaf representing one gene. The major tree branches constitute 11 modules labeled by different colors. (B) Heat map of gene relative expression of different modules (y-axis) in eight samples (x-axis). The Z-score normalized RPKM value for an individual gene at a given developmental stage is indicated in a green (low expression) to red (high expression) scale. (C) Eigengene network representing the relationships among the different modules. The hierarchical clustering dendrogram of the eigengenes shows the relationships among the modules, whereas the heat map shows the correlation between the different modules, with deeper red color representing a stronger correlation.
Expression profiles of genes associated with L. gratissima floral transition at four developmental stages, short- or long-day treatments. Relative expression profile of (A) photoperiod pathway-related genes, (B) ambient temperature pathway-related genes, (C) phytohormone metabolism-related genes, (D) phytohormone signal transduction-related genes, (E) sugar signal-related genes, (F) aging pathway-related genes, (G) floral integrator-related genes, and (H) floral meristem identity genes. The Z-score normalized RPKM value for an individual gene at a given developmental stage is represented in a green (low expression) to red (high expression) scale.

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Morphological, Physiological, and Molecular Responses of Sweetly Fragrant Luculia gratissima During the Floral Transition Stage Induced by Short-Day Photoperiod
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August 2021

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187 Reads

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1 Citation

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Youming Wan

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Jing An

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[...]

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Hong Ma

Photoperiod-regulated floral transition is vital to the flowering plant. Luculia gratissima “Xiangfei” is a flowering ornamental plant with high development potential economically and is a short-day woody perennial. However, the genetic regulation of short-day-induced floral transition in L. gratissima is unclear. To systematically research the responses of L. gratissima during this process, dynamic changes in morphology, physiology, and transcript levels were observed and identified in different developmental stages of long-day- and short-day-treated L. gratissima plants. We found that floral transition in L. gratissima occurred 10 d after short-day induction, but flower bud differentiation did not occur at any stage under long-day conditions. A total of 1,226 differentially expressed genes were identified, of which 146 genes were associated with flowering pathways of sugar, phytohormones, photoperiod, ambient temperature, and aging signals, as well as floral integrator and meristem identity genes. The trehalose-6-phosphate signal positively modulated floral transition by interacting with SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 (SPL4) in the aging pathway. Endogenous gibberellin, abscisic acid, cytokinin, and jasmonic acid promoted floral transition, whereas strigolactone inhibited it. In the photoperiod pathway, FD, CONSTANS-LIKE 12, and nuclear factors Y positively controlled floral transition, whereas PSEUDO-RESPONSE REGULATOR 7, FLAVIN-BINDING KELCH REPEAT F-BOX PROTEIN 1, and LUX negatively regulated it. SPL4 and pEARLI1 positively affected floral transition. Suppressor of Overexpression of Constans 1 and AGAMOUSLIKE24 integrated multiple flowering signals to modulate the expression of FRUITFULL/AGL8, AP1, LEAFY, SEPALLATAs, SHORT VEGETATIVE PHASE, and TERMINAL FLOWER 1, thereby regulating floral transition. Finally, we propose a regulatory network model for short-day-induced floral transition in L. gratissima. This study improves our understanding of flowering time regulation in L. gratissima and provides knowledge for its production and commercialization.

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Morphological, Physiological, and Molecular Responses of Sweetly Fragrant Luculia Gratissima During the Floral Transition Stage Induced by Short-day Photoperiod

October 2020

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149 Reads

Background: Photoperiod-regulated floral transition is vital to the flowering plant. Luculia gratissima ‘Xiangfei’ is a flowering ornamental plant with high development potential and is a short-day woody perennial. However, the genetic regulation of short-day-induced floral transition in L. gratissima is unclear. To systematically research the responses of L. gratissima during this process, dynamic changes in morphology, physiology, and transcript levels were observed and identified in different developmental stages of long-day and short-day-treated shoot apexes. Results: The results showed that floral transition in L. gratissima occurred 10 d after short-day induction, but flower bud differentiation did not occur under long-day conditions. A total of 1,226 differentially expressed genes were identified, of which 146 genes were associated with flowering pathways of sugar, phytohormones, photoperiod, ambient temperature, and aging signals, as well as floral integrator and meristem identity genes. The trehalose-6-phosphate signal positively modulated floral transition by interacting with SPL4 in the aging pathway. Endogenous gibberellin, abscisic acid, cytokinin, and jasmonic acid promoted floral transition, whereas strigolactone inhibited it. In the photoperiod pathway, FD, COL12, and NF-Ys positively controlled floral transition, whereas PRR7, FKF1, and LUX negatively regulated it. SPL4 and pEARLI1 positively affected floral transition. SOC1 and AGL24 integrated multiple flowering signals to modulate the expression of FUL/AGL8, AP1, LFY, SEPs, SVP, and TFL1, thereby regulating floral transition. Finally, we propose a regulatory network model for short-day-induced floral transition in L. gratissima. Conclusions: Short-day photoperiod activated systemic responses of morphology, physiology, and transcript levels in L. gratissima and induced the generation of floral transition signals in the photoperiod pathway. Furthermore, multiple flowering signal pathways including phytohormone-, sugar-, temperature-, age-related genes synergistically control this process. This study improves our understanding of flowering time regulation in L. gratissima and provides knowledge for its production and commercialization.


Development of novel EST-SSR markers for Phyllanthus emblica (Phyllanthaceae) and cross-amplification in two related species

July 2018

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92 Reads

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6 Citations

Premise of the Study A novel set of EST‐SSR markers was developed for Phyllanthus emblica (Phyllanthaceae) to investigate the genetic structure and gene flow, identify novel genes of interest, and develop markers for assisted breeding. Methods and Results Based on the transcriptome data of P. emblica, 83 EST‐SSR primer pairs were designed; 52 primer pairs were successfully amplified, with 20 showing polymorphisms in 90 individuals from three populations of P. emblica. The number of alleles per locus varied from 11 to 44. The observed and expected levels of heterozygosity for the 20 loci ranged from 0.240 to 0.868 and 0.754 to 0.933, respectively. Cross‐species amplification was successful for all 20 loci in each of the two related species, P. reticulatus and Leptopus chinensis. Conclusions These markers will be valuable for studying the population genetics and for mining genes of P. emblica, and may be useful for studies of related species.


TABLE 2 . Characteristics of the 15 polymorphic EST-SSR markers developed for Rhododendron longipedicellatum. 
Development of novel EST‐SSR markers for Rhododendron longipedicellatum (Ericaceae) and cross‐amplification in two congeners

June 2018

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81 Reads

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5 Citations

Premise of the Study To investigate the genetic background and population characteristics of Rhododendron longipedicellatum (Ericaceae), a newly discovered and critically endangered species, expressed sequence tag–simple sequence repeat markers were developed, and transferability was tested in two congeners, R. molle and R. simsii. Methods and Results Based on the transcriptome sequences of R. longipedicellatum, 102 primer sets were designed; 48 primer sets were successfully amplified, with 15 showing polymorphisms in 150 individuals from five extant populations of R. longipedicellatum. The number of alleles per locus ranged from four to 18, and the levels of observed and expected heterozygosity for the 15 loci varied from 0.255 to 0.913 and from 0.306 to 0.851, respectively. All 15 loci were found to amplify in R. molle and R. simsii. Conclusions These polymorphic SSR markers can be used in conservation genetic and phylogeographic studies to elucidate the rarity and origin of R. longipedicellatum.


Study on Reproductive Biology of Rhododendron longipedicellatum: A Newly Discovered and Special Threatened Plant Surviving in Limestone Habitat in Southeast Yunnan, China

January 2018

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496 Reads

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31 Citations

Rhododendron longipedicellatum is a narrow endemic species and a subject of urgent demand in the domestic market and overseas. Its fascinating shapes, brilliantly gilvous flowers, and unusual flowering time endow this species with extremely high ornamental value. However, only five wild populations of R. longipedicellatum surviving in limestone habitat have been found through elaborate field investigation, and the number of the populations decreases further or is even confronted with risk of extinction due to the damage of human activities. To enhance the protection and utilization of R. longipedicellatum, this study systematically investigated several important aspects of reproductive biology, including floral syndrome, pollen viability and stigma receptivity, petal color reflectance, breeding system, and pollination biology. The results demonstrated that arched styles not only create obvious herkogamy that avoide self-pollination, but also effectively reduce rain damage to the intrinsic characteristics of the stigma surface secretions, promoting the female fitness of R. longipedicellatum in poor weather. Pollen viability maintained a high level over the flowering period. The reflectance spectrum of petals had two peaks at wavelengths of 360 and 580 nm. Tests of OCI, P/O and artificial pollination all indicated that R. longipedicellatum was self-compatible and that the breeding system was mixed mating. Geitonogamy mediated by Bombus braccatus was the primary pollination route in the natural environment, which suggested that the breeding system of R. longipedicellatum might be evolving from selfing to outcrossing. The pollination vector of R. longipedicellatum was very specific, in that only B. braccatus was confirmed to deliver pollen to the stigmas. Visitation frequency was influenced by the activity rhythms and resource requirements of the different castes (i.e., sex). B. braccatus workers were the most effective pollinators because of higher visitation frequency and more effective contribution to fruit production, whereas the presence of B. braccatus males might enhance pollen flow within the population to a certain extent. Finally, these findings not only provided a reliable theoretical basis for hybridization breeding of R. longipedicellatum as parents, but also laid a solid foundation for further molecular biology studies to more broadly reveal the mechanisms of its endangerment in the future.


Table 2 . The Bray-Curtis similarity values (%) among stages of flower development of L. yunnanensis. (I) bud stage; (II) initial-flowering stage; (III) full-flowering stage; and (IV) end-flower stage. 
Floral Scent Chemistry of Luculia yunnanensis (Rubiaceae), a Species Endemic to China with Sweetly Fragrant Flowers

May 2017

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221 Reads

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19 Citations

Luculia plants are famed ornamentals with sweetly fragrant flowers.Luculia yunnanensisHu is an endemic plant from Yunnan Province, China. Headspace-solid phase microextraction-gas chromatography-mass spectrometry (HS-SPME-GC-MS) was used to identify the volatile organic compounds (VOCs) of the different flower development stages ofL. yunnanensisfor the evaluation of floral volatile polymorphism. The results showed that a total of 40 compounds were identified at four different stages. The main aroma-active compounds were 3-carene, α-cubebene, α-copaene, δ-cadinene, and isoledene. Floral scent emission had the tendency to ascend first and descend in succession, reaching its peak level at the initial-flowering stage. The richest diversity of floral volatiles was detected at the full-flowering stage. Principal component analysis (PCA) indicated that the composition and its relative content of floral scent differed at the whole flower development stage. In comparison with the other two species ofLuculia(L. pinceanaandL. gratissima), the composition and its relative content of floral scent were also different among the tree species.


Volatile Organic Compounds Emissions from Luculia pinceana Flower and Its Changes at Different Stages of Flower Development

April 2016

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285 Reads

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38 Citations

Luculia plants are famed ornamental plants with sweetly fragrant flowers, of which L. pinceana Hooker, found primarily in Yunnan Province, China, has the widest distribution. Solid phase microextraction-gas chromatography-mass spectrometry (SPME-GC-MS) was employed to identify the volatile organic compounds (VOCs) emitted from different flower development stages of L. pinceana for the evaluation of floral volatile polymorphism. Peak areas were normalized as percentages and used to determine the relative amounts of the volatiles. The results showed that a total of 39 compounds were identified at four different stages of L. pinceana flower development, including 26 at the bud stage, 26 at the initial-flowering stage, 32 at the full-flowering stage, and 32 at the end-flowering stage. The most abundant compound was paeonol (51%-83%) followed by (E,E)-α-farnesene, cyclosativene, and δ-cadinene. All these volatile compounds create the unique fragrance of L. pinceana flower. Floral scent emission offered tendency of ascending first and descending in succession, meeting its peak level at the initial-flowering stage. The richest diversity of floral volatile was detected at the third and later periods of flower development. Principal component analysis (PCA) indicated that the composition and its relative content of floral scent differed throughout the whole flower development. The result has important implications for future floral fragrance breeding of Luculia. L. pinceana would be adequate for a beneficial houseplant and has a promising prospect for development as essential oil besides for a fragrant ornamental owing to the main compounds of floral scent with many medicinal properties.


Table 1 . Cont. 
Table 1 . Characteristics of 24 microsatellite loci successfully amplified in Luculia yunnanensis. 
A Set of Novel Microsatellite Markers Developed for Luculia yunnanensis (Rubiaceae), an Endangered Plant Endemic to Yunnan, China

December 2012

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45 Reads

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5 Citations

The genus Luculia Sweet contains about five species of small trees or shrubs and is a member of the family Rubiaceae (tribe Cinchoneae). Luculia yunnanensis is an endangered ornamental shrub endemic to southwest China. Only two natural populations of L. yunnanensis exist in the wild according to our field investigation. It can be inferred that L. yunnanensis is facing a very high risk of extinction in the wild and an urgent conservation strategy is required. By using a modified biotin-sterptavidin capture method, 24 primer sets were identified in two wild populations. Of these primers, 11 displayed polymorphisms and 13 were monomorphic. The number of alleles per locus ranged from two to four, values for observed and expected heterozygosities ranged from 0.000 to 0.833 and from 0.431 to 0.771, with averages of 0.389 and 0.614, respectively. These markers will be useful for further investigation of conservation of resources, selecting parental types in cross-breeding, evolution of this species at the molecular level and related research in Luculia species.

Citations (6)


... From the first transcriptomic study of leaf and flower tissue of P. emblica using Illumina Hiseq2000 platform 1,34,205 unigene sequences and 89,242 singletons with an average contig length of 278 bp reported were reported by Kumar et al. 24 . While, in another leaf transcriptome study using Illumina Hiseq4000, a total of 76,881 non-redundant genes were reported by Liu et al. 11 . ...

Reference:

De novo transcriptome profiling and development of novel secondary metabolites based genic SSRs in medicinal plant Phyllanthus emblica L. (Aonla)
Development of novel EST-SSR markers for Phyllanthus emblica (Phyllanthaceae) and cross-amplification in two related species

... The R. williamsianum genome presented here adds to the growing body of genomic resources available for the genus. One other nuclear genome within the genus has been sequenced (Zhang, Xu, et al. 2017), and at least nine transcriptomes have been recently published (Fang et al. 2017;Xing et al. 2017;Cheng et al. 2018;Choudhary et al. 2018;Li et al. 2018;Wang et al. 2018;Xiao et al. 2018;Zhao et al. 2018). We hope that the availability of chromosome-scale scaffolding for the R. williamsianum genome will motivate other efforts in the genus and across the heath family to provide similar resources for examining chromosome evolution across these groups. ...

Development of novel EST‐SSR markers for Rhododendron longipedicellatum (Ericaceae) and cross‐amplification in two congeners

... The pistils were slightly taller than or flush with the stamens. The stamens grew separately, and the number of stamens was approximately [30][31][32][33][34][35]. The filaments were separated from each other and were 15.98 ± 1.97 mm long and 0.72 ± 0.12 mm wide. ...

Study on Reproductive Biology of Rhododendron longipedicellatum: A Newly Discovered and Special Threatened Plant Surviving in Limestone Habitat in Southeast Yunnan, China

... Ma et al. (2012) made use of a modified biotinstreptavidin capture method to develop 11 pairs of SSR primers with polymorphism in two populations of L. yunnanensis. Li et al. (2017) determined the floral components of L. yunnanensis. Zhang et al. (2022) developed 17 EST-SSR primers with polymorphism in six populations of L. yunnanensis based on transcriptomic data. ...

Floral Scent Chemistry of Luculia yunnanensis (Rubiaceae), a Species Endemic to China with Sweetly Fragrant Flowers

... Higher levels of δ-Cadinene and α-Farnesene present in the CCO plausibly contributed to its aroma and antioxidant activity (Y. Li et al., 2016). Chamazulene was detected in ICO but was not found in the CCO. ...

Volatile Organic Compounds Emissions from Luculia pinceana Flower and Its Changes at Different Stages of Flower Development

... Zhou et al. (2010) developed 13 pairs of SSR primers suitable for analyzing the genetic diversity of Luculia, which could effectively distinguish between L. yunnanensis and Luculia pinceana. Ma et al. (2012) made use of a modified biotinstreptavidin capture method to develop 11 pairs of SSR primers with polymorphism in two populations of L. yunnanensis. Li et al. (2017) determined the floral components of L. yunnanensis. ...

A Set of Novel Microsatellite Markers Developed for Luculia yunnanensis (Rubiaceae), an Endangered Plant Endemic to Yunnan, China