Vafidis D’s research while affiliated with University of Thessaly and other places

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Publications (88)


Figure 4. Preferred species caught in the South Evoikos Gulf.
Figure 5. Performance metrics (ROC, CA, MCC) acquired from stratified 5-fold cross validation for the prediction of the fishing ground choice.
Figure 6. The reason for the preference for the fishing field.
Socioeconomic analysis of the south Evoikos gulf small scale fishing industry using exploratory data analysis and supervised machine learning algorithms
  • Conference Paper
  • Full-text available

July 2024

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39 Reads

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Vafidis D

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Small-scale fisheries (SSF) constitute an important part of the fishing industry in Greece and the Mediterranean and are characterized by high heterogeneity and a multitude of specificities. The socioeconomic characteristics of the SSF fleet operating in south Evoikos were assessed using exploratory data analysis and supervised machine learning algorithms. Data were collected during winter-spring of 2023 through personal interviews using a structured questionnaire from 51 professional fishermen. Results exhibited an ageing workforce (60 years old mean age) with low education (74% primary school education), a similarly ageing fleet (mean 26 years old) and a fishing activity year-round. An interesting finding of the present study was the admission from two thirds of the interviewed fishermen that they regularly fish in the proximity of floating cage aquaculture farms. The best performed model (Gradient Boosting) indicated that the main reasons that influence the SSFs sector in the south Evoikos region in the choice of the fishing grounds is primarily vessel total length, followed by the fisherman's experience and port of embarkation.

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Figure 2. Scatterplot matrix with fitted line plots (lower left triangle of the scatterplot matrix) and heat map with Pearson correlation and associated probability values (upper right triangle of the scatterplot matrix). The color of each circle represents correlation strength circle size represents correlation significance between each pair of variables (larger circle indicates a more significant relationship).
Figure 3. Comparative profile of each hematological parameter at different trawl times and sampling depths.
Mean hematological properties, red blood cells (RBC 10 6 /μL), white blood cells (WBC 10 3 /μL), hemoglobin concentration (Hb g/dL), hematocrit (Ht %) and thrombocytes (TC 10 3 /μL), of wild caught European Hake (Merluccius Merluccius) captured from Toroneos gulf and comparison with published hake values present in the published literature. Values are mean ± standard deviation, significance level: ** p < .01, *** p < .001).
European hake (Merluccius merluccius) hematological properties from Toroneos gulf, Greece

Hematological properties of M. merluccius, a widespread bottom-dwelling species in the Mediterranean Sea, highly sought-after from the commercial fishery captured using a traditional Greek commercial bottom trawl from Toroneos gulf were estimated. Blood samples were retrieved from the tail vein of 40 adult individuals captured from variable depths and trawl durations. Hematological properties measured by an automated hematology analyzer included red blood cells (RBC), white blood cells (WBC), hemoglobin concentration (Hb), hematocrit (Ht) and thrombocytes (TC). Significant correlations were observed among most hematological properties. Significant differences were observed in RBC, Hb and Ht among the present study and values from wild caught European hake from Argentina and Denmark. Trawling depth and duration were both factors significantly affecting RBC, WBC, HB, and Ht with no significant effect on TC. Individuals captured from 80-meter average depth and 30 min trawl duration exhibited significantly higher values. Assessing the state of fish populations faces hurdles due to the lack of reliable references in their natural habitat. Hematology analysis stands out as a cost-effective and practical method extensively employed to gauge the physiological and health status of fish. However, there is a scarcity of comprehensive data regarding the hematological parameters of M. merluccius.


Figure 1 . Location of Volos port .
Fishing tourism in Magnesia region present status and future perspectives

Fishing tourism is an eco-friendly and environmentally sustainable touristic activity exhibiting a growing development in several European coastal regions as an innovative product. The potential of fishing tourism as an alternative source of income for the small-scale fisheries sector is highlighted for Magnesia region. The present study describes the practices currently applied, highlights the impediments for further growth and proposes measures for its development in the region.


Figure 1. Map of the wider region and location of sampling area.
Figure 2. pH values of experimental pots from the 6 different treatments of soil mixed with (A) Fine powder of ground mussel shells (grain size <1mm); (B) Coarse powder of ground mussel shells (grain size 1 -2 mm).
Figure 3. Response surface analysis 3D and contour plots of A) pH combined with the Fine powder and B) pH combined with the Coarse powder.
Physicochemical properties of the soil used for the experiment.
Physicochemical properties of the different ground mussel shell powders used for the experiment.
Liming Effect of Mussel Shell (Mytilus galloprovincialis) Waste on High Acidic Soil

December 2023

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797 Reads

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1 Citation

Aquaculture by-products can be compromised an important liming material of increasing soil pH and soil fertility. The aim of this research was to assess the effect of mussel shells on soil pH, on organic matter and on soil nutrients. In this study a pot experiment was carried out at the De-partment of Ichthyology and Aquatic Environment (University of Thessaly, Greece). A acidic soil (pH 4.26) amended with 6 different proportions of mussel shell (0.0, 0.1, 0.3, 0.5, 1, 3 and 6%) in two different grain sizes (Fine powder (>1 mm) and Coarse powder (1-2 mm)), resulting in 13 treatments. According to the results, it was observed that pH, organic matter, Available P and Exchangeable K increased. Specifically, the highest pH values observed at 6% rate. Available P and Exchangeable K achieved the highest content at 6% Fine powder treatment, 46.2 and 190.1 mg kg-1, respectively. Similarly, organic matter had the highest value in 6% Fine powder pots (2.27%). Moreover, Total N concentration varied from 0.11 to 0.14 but no statistically significant different was noticed between the treatments. In conclusion, mussel shells can compose a promising liming material in the agriculture section.



Population genetics of European hake (Merluccius merluccius L.) in the Mediterranean Sea using mitochondrial DNA

November 2022

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102 Reads

It is well documented that population structure needs to be defined for fishery management purposes. However, studies are scarce and information about finer scale population structure, which is important for stock assessments and fishery management, is largely lacking. In the present study the population genetics of the European hake (Merluccius merluccius, L.) was evaluated using the Cytochrome Oxidase subunit I (COI) MtDNA. Results show that the species in the limit of its distribution is dominated by the same unique haplotype, suggesting a low heterozygosity and possibly a vulnerable population with respect to fitness. On the other hand, in the southern Aegean there is a unique haplotype, suggesting local adaptation of the species. Fst pairwise differences suggest in general a differentiation within the Mediterranean basin. Keywords: population genetics, COI, Mediterranean, European hake


Figure 1. Map of the sampling area and the location of the Pagasitikos Gulf.
Figure 2. Composite sample creation process.
Estimated weekly intakes (EWI, mg kg -1 body weight), percent coverage of provisional tolerable weekly intakes (PTWI), target hazard quotients (THQ), and total hazard quotient (TTHQ) for the trace elements Cd and Pb in the whole body and muscle tissue of P. longirostris.
Trace Element Content and Potential Human Health Risk from Consumption of the Deep-water Rose Shrimp Parapenaeus longirostris (Crustacea: Decapoda) from Pagasitikos Gulf, Greece

May 2022

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155 Reads

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4 Citations

The content of As, Cd, Cr, Cu, Fe, Mn, Ni, Pb, and Zn as the whole-body burden and the content of Cd and Pb in muscle tissue of Parapenaeus longirostris, were evaluated in shrimp collected from the Pagasitikos Gulf, Greece. The whole-body burden of Fe was 102 ± 39, Mn 71 ± 23, As 64 ± 33, Zn 62 ± 8, Cu 34 ± 16, Ni 4.6 ± 2.9, Cr 1.01 ± 0.39, Cd 0.93 ± 0.33 and Pb 0.88 ± 0.47 ppm wet weight. Muscle tissue content for Cd was 0.47 ± 0.08 and for Pb 0.31 ± 0.06 ppm wet weight. The estimation of weekly intakes and target hazard quotients for the potentially toxic elements Cd and Pb revealed that rose shrimp from Pagasitikos Gulf could be considered safe for human consumption, probably with a general advisory to avoid the consumption of anything other than the muscle tissue.


SPATIOTEMPORAL MONITORING OF SEA SURFACE TEMPERATURE IN A CENTRAL AEGEAN MPA

This work examines the spatial and temporal variability of sea surface temperature (SST) in a marine protected area (MPA), using remotely sensed data. The National Marine Park of Alonissos, Northern Sporades, was selected as a study area. Satellite data from MODIS (Moderate Resolution Imaging Spectroradiometer), NASA's Terra satellite, were used, covering a period of twenty years. Both day and night monthly SST satellite images were examined and the slope of temperature was extracted for each pixel of the study area. The results showed that there is an increasing trend in SST throughout the study area with local variations.




Citations (39)


... Subsequently, dried shells were ground using a mortar and pestle and sieved through a 1 mm stainless sieve. Then, the acquired powder was mixed with 10 kg of soil in different ratios (C = 0 g, T1 = 10 g, T2 = 30 g, T3 = 50 g, T4 = 100 g, T5 = 300, and T6 = 600 g of mussel shell powder) [26]. ...

Reference:

Effect of Mussel Shells as Soil pH Amendment on the Growth and Productivity of Rosemary (Rosmarinus officinalis L.) Cultivation
Liming Effect of Mussel Shell (Mytilus galloprovincialis) Waste on High Acidic Soil

... In general, the study area is a part of the Eastern Ionian Sea, characterized by a narrow continental shelf and steep slopes to the deep. Although it is an oligotrophic area, it still has an important role in the fishing activity of Greece (Skordas et al. 2022;Ramon et al. 2021). Furthermore, according to Gerakaris et al. (2021), Posidonia oceanica meadows in the Eastern Ionian Sea are denser, and spread significantly deeper, than those of the Aegean Sea due to lower turbidity and hence higher light availability in the region. ...

Trace Element Content and Potential Human Health Risk from Consumption of the Deep-water Rose Shrimp Parapenaeus longirostris (Crustacea: Decapoda) from Pagasitikos Gulf, Greece

... The method used for the collection of animals is explained in detail in Feidantsis et al. [30,31]. S. officinalis, H. tubulosa, and V. verrucosa were collected from the Thermaikos, Pagasitikos, and Vistonikos gulfs ( Figure 1). ...

Seasonal metabolic and oxidative stress responses of commercially important invertebrate species—correlation with their habitat
  • Citing Article
  • January 2020

Marine Ecology Progress Series

... Habitat hidup bulu babi tersebar mulai zona intertidal yang ditumbuhi lamun hingga ke celah-celah karang sampai kedalaman 130 m (Zakaria, 2013;Vafidis, 2020). Pulau Tolandono merupakan salah satu pulau di Kecamatan Tomia Kabupaten Wakatobi. ...

Population Density, Size Structure, and Reproductive Cycle of the Comestible Sea Urchin Sphaerechinus granularis (Echinodermata: Echinoidea) in the Pagasitikos Gulf (Aegean Sea)

Animals

... The tooth cross-section of echinoids presents a variety of shapes, from keeled and grooved to wedgelike and diamond-shaped, which is hypothesized to confer different functional properties (Ziegler et al., 2012). The Mg content of echinoid teeth seems to be related to hardness, however, it is shown to vary with skeletal element, taxonomy, and latitude, while abiotic factors like temperature, salinity, and ambient seawater Mg/Ca ratio and even food source also seem to have a strong influence on the mineralogy of the echinoid skeleton, which would mean that the mechanical properties of the tooth can vary not only among species, but also between intraspecific populations (Kolbuk et al., 2019;Ma et al., 2009;Smith et al., 2016;Varkoulis et al., 2020). ...

Chemical Composition and Microstructural Morphology of Spines and Tests of Three Common Sea Urchins Species of the Sublittoral Zone of the Mediterranean Sea

Animals

... Among marine organisms, bivalves are additionally exposed to acute surface seawater temperature increases as a result of the impacts of climate change in aquatic ecosystems and therefore exhibit increased oxidative stress and anaerobiosis (Abele et al. 2002;Sokolova et al. 2012;Feidantsis et al. 2020a). The effect of heat stress on the Mediterranean mussel Mytilus galloprovincialis (Lamarck, 1819) has been extensively investigated, and therefore, this species' molecular and physiological responses to increased temperatures are on a large scale known. ...

Correlation between intermediary metabolism, Hsp gene expression and oxidative stress related proteins in long-term thermal stressed Mytilus galloprovincialis

AJP Regulatory Integrative and Comparative Physiology

... On the other hand, the rest of the Greek populations show high connectivity. Previous studies within the Aegean Sea also show a low genetic structure [33,51,52], suggesting a relative panmixia and the existence of single stocks. This may be due to oceanographic complexity of the area [53] and to apparent large effective population sizes that may shape dispersal and the population dynamics of the species in the eastern Mediterranean basin [54]. ...

High Connectivity of the White Seabream (Diplodus sargus, L. 1758) in the Aegean Sea, Eastern Mediterranean Basin

Animals

... Indeed, the European hake is a highly commercial species and over-fishing may alter its population structure and dynamics. Furthermore, oceanographic factors have a vital impact on genetic diversity and adaptation, mostly due to the dispersal capacity of the larvae [32,33,34] that are able to travel large geographical distances. European hake presents coastal nursery areas where the young individuals are recruited, showing a more widespread distribution of planktonic larvae beyond the spawning grounds [35]. ...

Heterozygosity fitness correlations and generation interval of the Norway lobster in the Aegean Sea, eastern Mediterranean

Journal of Biological Research-Thessaloniki

... Worker resistance to the current system may hinder adoption. [69,70] 09 Data integration and management issue ...

Efficient traceability of aquatic products on the cold supply chain management via IoT and artificial neural networks

... Furthermore, trace metals are deemed to be a major pollutant due to their behavior, they are not easily degradable, can accumulate in food chain and can further degrade the ecosystem structure. On the other hand, trace metals in specific amounts, play a significant role in the health of organisms, affecting various biological processes such as growth, reproduction, behavior (Skordas et al., 2022) through development and migration (Ahmed et al., 2017), with the later playing a significant role in the safeguarding the reproductive stocks (Konstantinidis et al., 2017). Trace elements in the aquatic environment, tend to settle and accumulate in bottom sediments, affecting non-selective feeders such as sea cucumbers (Ahmed et al., 2018;Bat and Arici, 2018;de Fretes et al., 2020). ...

Population structure of two benthic species with different larval stages in the eastern Mediterranean Sea

Journal of Environmental Protection and Ecology