Tunhe Zhou’s research while affiliated with Stockholm University and other places

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Publications (4)


Figure 4. 3D rendering of the X-ray microCT images showing the external and internal of the head, and the main parts of the brain.
Figure 5. The volumes of the six brain regions of the 29 specimens were measured from the segmentation. The error bars show the
Figure 6. (a) Evaluation of predictions in the coronal plane using average dice score (DSC) and average relative error (RE) between
Figure 7 Experiment setup showing the X-ray scanner equipment and the samples prepared in a queue to be scanned
Figure 8. (a) The images are aligned and cropped to keep the brain for fast segmentation. (b,c) Demonstration of manual
Brain virtual histology of a lizard species (Podarcis bocagei) using X-ray micro-tomography and deep-learning segmentation
  • Preprint
  • File available

July 2024

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103 Reads

Tunhe Zhou

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Yulia Dragunova

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Lately, there has been an emphasis on the importance of studying inter-individual variation in animal behaviour and cognition and understanding its underlying mechanisms. What was once considered mere noise around population mean can be explained by individual characteristics such as brain morphology and functionality. However, logistical limitations can be faced when studying the brain, especially for research involving wild animals, such as dealing with small sample sizes and time-consuming methods. Here, we combined an efficient and accurate method using X-ray micro-tomography and deep-learning (DL) segmentation to estimate the volume of six main brain areas of wild lizards, Podarcis bocagei: olfactory bulbs, telencephalon, diencephalon, midbrain, cerebellum and brain stem. Through quantitative comparison, we show that a sufficient deep-learning neural network can be trained with as few as five data sets. From this, we applied the trained deep-learning algorithm to obtain volume data of the six brain regions from 29 brains of Podarcis bocagei. We provide a detailed protocol for our methods, including sample preparation, X-ray tomography, and 3D volumetric segmentation. Our work is open-access and freely available, with the potential to benefit researchers in various fields, such as animal physiology, biomedical studies, and computer sciences.

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Social complexity affects cognitive abilities but not brain structure in a Poeciliid fish

April 2024

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136 Reads

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6 Citations

Behavioral Ecology

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Tunhe Zhou

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Elli Argyriou

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[...]

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Some cognitive abilities are suggested to be the result of a complex social life, allowing individuals to achieve higher fitness through advanced strategies. However, most evidence is correlative. Here, we provide an experimental investigation of how group size and composition affect brain and cognitive development in the guppy (Poecilia reticulata). For six months, we reared sexually mature females in one of three social treatments: a small conspecific group of three guppies, a large heterospecific group of three guppies and three splash tetras (Copella arnoldi)-a species that co-occurs with the guppy in the wild, and a large conspecific group of six guppies. We then tested the guppies' performance in self-control (inhibitory control), operant conditioning (associative learning) and cognitive flexibility (reversal learning) tasks. Using X-ray imaging, we measured their brain size and major brain regions. Larger groups of six individuals, both conspecific and heterospecific groups, showed better cognitive flexibility than smaller groups, but no difference in self-control and operant conditioning tests. Interestingly, while social manipulation had no significant effect on brain morphology, relatively larger telencephalons were associated with better cognitive flexibility. This suggests alternative mechanisms beyond brain region size enabled greater cognitive flexibility in individuals from larger groups. Although there is no clear evidence for the impact on brain morphology, our research shows that living in larger social groups can enhance cognitive flexibility. This indicates that the social environment plays a role in the cognitive development of guppies.



Figure 3. Brain morphology of the guppies from the three social treatments. Scatterplot and regression lines of log-normal transformed and standardized volume (mm 3 ) of the brain measurement on the log-normal transformed and standardized body size (standard length in mm) as a function of social treatment, from (a) the baseline dataset of the 29 female guppies sampled before the cognitive tests and (b) test dataset (80 female guppies) after the cognitive tests. The three social treatments indicated by different colours are social groups of three guppies, three guppies with three splash tetras, and six guppies. There were no significant effects of social treatment on brain morphology (p > 0.05).
Figure 5. The relationship of associative learning performance and brain morphology of the guppies from the three social treatments. Scatterplot and regression lines of performance rank (where highest ranks refer to highest performance) on brain measurement residuals (xaxes) (N = 80). No significant effect was detected (p > 0.05).
Figure 6. The relationship of reversal learning performance and brain morphology of the guppies from the three social treatments. Scatterplot and regression lines of performance rank (where highest ranks refer to highest performance) on brain measurement residuals (xaxes) (N = 80). Only the telencephalon relative size correlated significantly with performance (p < 0.05).
Social complexity affects cognitive abilities but not brain structure in a Poecilid fish

August 2023

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154 Reads

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2 Citations

Complex cognitive performance is suggested to be the out-turn of complex social life, allowing individuals to achieve higher fitness through sophisticated "Machiavellian" strategies. Although there is ample support for this concept, especially when comparing species, most of the evidence is correlative. Here we provide an experimental investigation of how group size and composition may affect brain and cognitive development in the guppy (Poecilia reticulata). For six months, we reared sexually mature female guppies in one of three different social treatments: (i) three female guppies; (ii) three female guppies mixed with three female splash tetras (Copella arnoldi), a species that co-occurs with the guppy in the wild; and (iii) six female guppies. We then tested the guppies' performance in inhibitory control, associative learning and reversal learning tasks to evaluate their self-control, operant conditioning and cognitive flexibility capabilities. Afterwards, we estimated their brain size and the size of major brain regions using X-ray imaging technology. We found that individuals in larger groups of six individuals, in both same and mixed species treatments, outperformed individuals from the smaller groups of three guppies in reversal learning, with no apparent differences in the inhibitory control and associative learning tasks. This is rare evidence of how living in larger social groups improves cognitive flexibility, supporting that social pressures play an important role in shaping individual cognitive development. Interestingly, social manipulation had no apparent effect on brain morphology, but relatively larger telencephalons were associated with better individual performance in reversal learning. This suggests alternative mechanisms beyond brain region size enabled greater cognitive flexibility in individuals from larger groups.

Citations (2)


... This was done because larval zebrafish display a limited behavioural repertoire that prevents assaying several cognitive traits. Teleost fish exhibit remarkable cognitive plasticity across various functions (Brandão et al., 2019;Fontana et al., 2021;Kotrschal & Taborsky, 2010;Lucon-Xiccato, Montalbano, & Bertolucci, 2023;Montalbano et al., 2022;Salvanes et al., 2013;Spence et al., 2011;Toni et al., 2019;Triki et al., 2024), including responses to environmental stressors (Domenici et al., 2012;Knecht et al., 2017;Lucon-Xiccato, Savaş çı, et al., 2023;Moreira et al., 2023;Naderi et al., 2018;Pilehvar et al., 2020;Silveira et al., 2023;Sørensen et al., 2013). Moreover, fish retain abundant neurogenesis and neural plasticity as adults (Pushchina et al., 2024). ...

Reference:

Differential impact of artificial light at night on cognitive flexibility in visual and spatial reversal learning tasks
Social complexity affects cognitive abilities but not brain structure in a Poeciliid fish

Behavioral Ecology

... All authors gave final approval for publication and agreed to be held accountable for the work performed therein. A preprint version of this article is available on bioRxiv (Triki, Zhou, et al. 2023). M a n u s c r i p t A c c e p t e d M a n u s c r i p t ...

Social complexity affects cognitive abilities but not brain structure in a Poecilid fish