Taehwan Jang’s research while affiliated with Korea Advanced Institute of Science and Technology and other places

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Publications (7)


DFT-CES2: Quantum Mechanics Based Embedding for Mean-Field QM/MM of Solid–Liquid Interfaces
  • Article

April 2025

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2 Reads

JACS Au

Taehwan Jang

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Seung-Jae Shin

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Hyung-Kyu Lim

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[...]

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Hyungjun Kim


Density functional theory in classical explicit solvents: Mean‐field QM / MM method for simulating solid–liquid interfaces

January 2022

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20 Reads

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9 Citations

Bulletin of the Korean Chemical Society

Solid–liquid interfaces are ubiquitous in scientifically and technologically important systems, and they govern complex chemophysical processes such as those in electrochemistry and heterogeneous catalysis. Atomic-level elucidation of interfacial structures has been extensively pursued; however, related research is still limited. A major obstacle lies in the intrinsic character of interfaces: they are located between two bulk phases that make the application of spectroscopic or surface-science techniques be difficult. Although this suggests the possibility of employing computational approaches to explore interfacial structures, modern molecular simulation methods suffer from an inability to simulate large interfacial systems in a sufficient time scale at the all-atom resolution. To develop a method capable of simulating solid–liquid interfaces, we have been developing a mean-field quantum mechanics/molecular mechanics (QM/MM) method. This Review briefly summarizes the theoretical background of mean-field QM/MM, as well as recent efforts to advance it. Furthermore, we summarize several studies performed based on this method.



Microbially guided discovery and biosynthesis of biologically active natural products
  • Preprint
  • File available

October 2020

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95 Reads

The design of small molecules that inhibit disease-relevant proteins represents a longstanding challenge of medicinal chemistry. Here, we describe an approach for encoding this challenge—the inhibition of a human drug target—into a microbial host and using it to guide the discovery and biosynthesis of targeted, biologically active natural products. This approach identified two previously unknown terpenoid inhibitors of protein tyrosine phosphatase 1B (PTP1B), an elusive therapeutic target for the treatment of diabetes and cancer. Both inhibitors target an allosteric site, which confers unusual selectivity, and can inhibit PTP1B in living cells. A screen of 24 uncharacterized terpene synthases from a pool of 4,464 genes uncovered additional hits, demonstrating a scalable discovery approach, and the incorporation of different PTPs into the microbial host yielded alternative PTP-specific detection systems. Findings illustrate the potential for using microbes to discover and build natural products that exhibit precisely defined biochemical activities yet possess unanticipated structures and/or binding sites.

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Microbially guided discovery and biosynthesis of biologically active natural products

October 2020

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97 Reads

The design of small molecules that inhibit disease-relevant proteins represents a longstanding challenge of medicinal chemistry. Here, we describe an approach for encoding this challenge—the inhibition of a human drug target—into a microbial host and using it to guide the discovery and biosynthesis of targeted, biologically active natural products. This approach identified two previously unknown terpenoid inhibitors of protein tyrosine phosphatase 1B (PTP1B), an elusive therapeutic target for the treatment of diabetes and cancer. Both inhibitors appear to target an allosteric site, which confers selectivity, and can inhibit PTP1B in living cells. A screen of 24 uncharacterized terpene synthases from a pool of 4,464 genes uncovered additional hits, demonstrating a scalable discovery approach, and the incorporation of different PTPs into the microbial host yielded alternative PTP-specific detection systems. Findings illustrate the potential for using microbes to discover and build natural products that exhibit precisely defined biochemical activities yet possess unanticipated structures and/or binding sites.


Metal-Oxide Interfaces for Selective Electrochemical C-C Coupling Reactions

August 2019

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98 Reads

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85 Citations

ACS Energy Letters

Metal-oxide interfaces provide a new opportunity to improve catalytic activity based on electronic and chemical interactions at the interface. Constructing high density of interfaces is essential in maximizing synergistic interactions. Here, we demonstrate that Cu/ceria interfaces made by sintering nanocrystals facilitate C-C coupling reactions in electrochemical reduction of CO2. The Cu/ceria catalyst enhances the selectivity of ethylene and ethanol production with suppressing H2 evolution in comparison with Cu catalysts. The intrinsic activity for ethylene production is enhanced by decreasing the atomic ratio of Cu/Ce, revealing the Cu atoms near ceria are an active site for C-C coupling reactions. The ceria is proposed to weaken hydrogen binding energy of adjacent Cu sites and stabilize an *OCCO intermediate via an additional chemical interaction with an oxygen atom of the *OCCO. This work offers new insights into the role of the metal-oxide interface in the electrochemical reduction of CO2 to high-value chemicals.

Citations (4)


... The second and third peaks originate from edge-shared (MnÀ OÀ Mn(III) Oh ) and corner-shared (MnÀ OÀ Mn-(II) Td ) multiple scattering, respectively. [34] Compared to the pure Mn 3 O 4 sample, the peak intensity of edge-shared multiple scattering is almost unchanged, the corner-shared multiple scattering significantly diminished from the Al-doped Mn 3 O 4 samples. The wavelet transform (WT) plots also confirm the change of MnÀ O coordination in Al-doped Mn 3 O 4 with a slightly higher intensity of MnÀ O bond (around k = 7.5 Å À 1 ) (Figure 3(f), 3(i)). ...

Reference:

The Doping of Al at the Tetrahedral Site of Spinel Mn3O4 for Electrocatalytic Water Oxidation
Iridium-Cooperated, Symmetry-Broken Manganese Oxide Nanocatalyst for Water Oxidation
  • Citing Article
  • December 2023

Journal of the American Chemical Society

... To identify the chemical role of M + during CO 2 RR, we first investigate atomic details of the catalyst-electrolyte interface using density functional theory in classical explicit solvent (DFT-CES) simulation 36 . This method offers an accurate description of the electrified interface at a balanced computational cost, by mean-field coupling of a quantum mechanical description on the catalyst surface with a molecular dynamics description on the liquid structure of the electrolyte phase 37 . Recent advances in computational simulations enable a direct investigation of the electrode-electrolyte structure, highlighting the importance of the atomic arrangement of EDL constituents (e.g. ...

Density functional theory in classical explicit solvents: Mean‐field QM / MM method for simulating solid–liquid interfaces
  • Citing Article
  • January 2022

Bulletin of the Korean Chemical Society

... In prior work, we developed a bacterial two-hybrid (B2H) system that links the inhibition of PTP1B from Homo sapiens (H. sapiens) to the expression of a gene for antibiotic resistance in E. coli (Sarkar et al., 2021). Our original study details the development of this system and describes each of its components, including the promoters and ribosome binding sites. ...

Microbially Guided Discovery and Biosynthesis of Biologically Active Natural Products
  • Citing Article
  • May 2021

ACS Synthetic Biology

... Rights reserved the structure-activity relationships. To modulate Cu electronic structure, research interest has concentrated on alloying 12,13 , doping engineering 14,15 , metal-support interaction (MSI) modulation 16,17 , and so on. In heterogeneous catalysis, MSI significantly affects the catalytic performance as it modulates the electronic and geometric structures of metal as well as coordination environments. ...

Metal-Oxide Interfaces for Selective Electrochemical C-C Coupling Reactions
  • Citing Article
  • August 2019

ACS Energy Letters