Somia Mehennaoui’s research while affiliated with University of Quebec in Montreal and other places

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Publications (2)


Supplementary Material
  • Data
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April 2019

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21 Reads

Somia Mehennaoui

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Figure 2. (A) Binding saturation curve of all aptamers with DXN beads determined by the fluorescence assay, by plotting the concentration of the complex formed by the binding between ssDNA aptamer and DXN analyte ([ssDNA−DXN]) as a function of unbound ssDNA concentration. (B) Circular dichroism spectra of 3 μM of the DEX04 before (Black line) and after recognition of 3 μM DXN (Red line). (C) Cross-reactivity study of the DEX04 aptamer to progesterone (P4), norethisterone (NET) and 17β-estradiol (E2).
Figure 3. Impedimetric mechanism of aptasensor.
Figure 4. (A) AFM images of the bare electrode and (B) DEX04 aptamer-immobilized gold electrode.
Figure 5. (A) Cyclic voltammograms and (B) impedance spectra (Nyquist plots) of 10 mM [Fe(CN) 6 ] 4−/3− in PBS, pH 7.4, for bare Au electrode, Au/MCH, Au/MCH/DEX04 before and after recognition to 50 nM and 100 nM DXN. The inset is the equivalent circuit used for the impedance data fitting; R s is the solution resistance between working and reference electrodes, Z w is Warburg impedance; Cdl is the double layer capacitance and R ct is the charge-transfer resistance.
Selection of DXN aptamers; ssDNA recovery from each SELEX cycle and the resulting enrichment plateau. Negative selection (NS) performed by using blank beads.

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Selection of high affinity aptamer-ligand for dexamethasone and its electrochemical biosensor

April 2019

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1,333 Reads

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42 Citations

A high specificity aptamer-ligand biorecognition and binding system to monitor of dexamethasone (DXN) was developed. The detection principle was based on a label-free electrochemical aptasensor. The selection of the aptamer was successfully performed by the systematic evolution of ligands through exponential enrichment technique (SELEX). From a random library of 1.08 × 1015 single-stranded DNA, an aptamer designated as DEX04 showed a highest affinity with a dissociation constant of 18.35 nM. It also showed a good conformational change when binding with DXN. In addition, the aptamer DEX04 did not show any cross-reactivity with other commonly used hormones. An impedimetric aptasensor for DXN was then developed by immobilizing DEX04 on a gold electrode. The binding upon to DXN was monitored by following the change in the charge transfer resistance (Rct) of the [Fe(CN)6]4−/3− redox couple. The aptasensor exhibited a linear range from 2.5 to 100 nM with a detection limit of 2.12 nM. When applied aptasensor to test in water samples, it showed good recovery percentages. The new DXN aptamer can be employed in other biosensing applications for food control and the diagnosis of some diseases in medicine as a cost-effective, sensitive and rapid detection method.

Citations (1)


... In addition to CD spectral shifts, changes in the intensity of CD peaks at a given wavelength can indicate conformational changes of aptamers (Chang et al., 2012;Mehennaoui et al., 2019;Aljohani et al., 2020;Xie et al., 2022;Xu et al., 2022;Wu et al., 2023;Alkhamis et al., 2024). Xie et al. (2022) used CD to demonstrate the target-induced structural changes of several truncated methamphetamine (MAMP)-binding aptamers. ...

Reference:

Solution-based biophysical characterization of conformation change in structure-switching aptamers
Selection of high affinity aptamer-ligand for dexamethasone and its electrochemical biosensor