Shinji Urata’s research while affiliated with The University of Texas Medical Branch at Galveston and other places

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Publications (39)


Anatomy of the hamster tongue. Distribution of tongue papillae and related histology. A midline vallate papillae resides in the posterior region (white oval), foliate papillae on the sides (white curved lines), fungiform papillae on the anterior (white circles), and filiform papillae filling the remaining space. Taste buds (arrowheads) reside on the sides of the vallate papillae and the tips of the fungiform papillae but are not found on the filiform papillae. Salivary glands are located beneath the troughs of vallate papillae and help dissolve food molecules. SC; stratum cornuem, SS; stratum spinosum, SB; stratum basale, LP; lamina propria, TB; taste buds
Papillae counting. (A) Magnified 8-bit image of the anterior tongue using Image J v1.53a. The region of interest (ROI) was demarcated (grey line) using Image J freehand tool, the fungiform papillae were counted using the Cell Counter plugin for Image J (dark blue dots), and the area (mm²) calculated using the measurement tool in Image J with the ruler behind the tongue for reference. Papillae were excluded from the count (light blue dot) if they were found to not be a complete circle, not completely within the ROI, or not approximately 3:1 in size when compared with surrounding filiform papillae. Scale bar indicates 500 μm. (B) Magnified 8-bit inverted image of the anterior tongue using Image J v1.53a. Red dots indicate computer generated counting of the papillae using the Image-based Tool for Counting Nuclei plugin for Image J. Scale bar indicates 100 μm. (C) Fungiform papillae densities were plotted against days post infection (dpi). Error bars indicate mean and standard deviation. No significant differences were found between any of the infected groups (dpi#) or mock (ctrl) when tested with ANOVA set to p < 0.05. For all groups, n = triplicates of 4. (D) Filiform papillae densities were plotted against dpi. Error bars indicate mean and standard deviation. No significant differences were found between any of the infected groups (dpi#) or ctrl when tested with ANOVA set to p < 0.05. For all groups, n = triplicates of 4
SARS-CoV-2 antigen labeling in the tongue. Representative images of immunohistochemical labeling (1:200 antibody dilution) of structures of interest with or without infection with SARS-CoV-2. The infected samples at 5 days post infection (dpi) are shown in the lower panels (G, H, I, J, K, and L), with arrowheads pointing to positive brown-colored labeling of the SARS-CoV-2 antigen, compared with negative labeling in the mock infected control samples in the upper panels (A, B, C, D, and E). The vallate papillae taste buds (G) and ganglion cells (L) show positive labeling, while fungiform papillae taste bud (H), serous salivary gland cells (J), and mucous salivary gland cells (K) show weakly positive labeling. The filiform papilla cells (I) were negative for labeling. Scale bars indicate 100 μm
Histopathology of the tongue in a hamster model of COVID-19
  • Article
  • Full-text available

January 2025

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49 Reads

BMC Oral Health

John Coggins

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Rebecca Cook

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Objective With altered sense of taste being a common symptom of coronavirus disease 2019 (COVID-19), the main objective was to investigate the presence and distribution of severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) within the tongue over the course of infection. Methods Golden Syrian hamsters were inoculated intranasally with SARS-CoV-2 and tongues were collected at 2, 3, 5, 8, 17, 21, 35, and 42 days post-infection (dpi) for analysis. In order to test for gross changes in the tongue, the papillae of the tongue were counted. Paraffin-embedded thin sections of the tongues were labeled for the presence of SARS-CoV-2 antigen. Results There was no difference in fungiform or filiform papillae density throughout the course of infection. SARS-CoV-2 antigen was observed in the vallate papillae taste buds (3–35 dpi) and autonomic ganglia (5–35 dpi), as well as in the serous and mucous salivary glands of the posterior tongue (2–42 dpi). Conclusion The presence and distribution of SARS-CoV-2 suggest that the virus could cause taste disturbance by infecting the vallate papillae taste buds. This effect could be exacerbated by a diminished secretion of saliva caused by infection of the serous salivary glands and the autonomic ganglia which innervate them.

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Crista Fenestra Heights Measured by HRCT Predicts the Necessity for Extended Round Window Approach for Slim Modiolar Electrode

September 2024

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21 Reads

Otology & neurotology: official publication of the American Otological Society, American Neurotology Society [and] European Academy of Otology and Neurotology

Objective To evaluate the morphology of the crista fenestra (CF) using three-dimensional reconstruction based on high-resolution computed tomography (HRCT) and to examine the influence of CF height on the insertion approach used for CI632/532 implants. Study design Retrospective study Setting Tertiary referral center Patients Forty-five ears of 37 patients who received CI632/532 implants were included. Interventions HRCT images were reconstructed into three-dimensional images, and CF structures were identified. The patients were divided into two group based on the insertion approach: round window approach (RW; n = 27) and extended round window approach (eRW; n = 18). To evaluate CF interference, 10 cases in the eRW group in which the sheath or electrode did not pass through the RW before widening the RW niche (nRW group) were specifically included in the analysis. Main outcome measure The identified CF cross-sections were confirmed by HRCT axial sectioning, and CF heights were measured. Results The mean CF height was significantly greater in the nRW group than in the RW group (0.97 vs. 0.78 mm). Conclusion CF was identified using three-dimensional computer graphics (3DCG) and the CF height on the HRCT axial sections. Thus, measuring the CF height using 3DCG reconstruction can facilitate the preoperative selection of the electrode insertion approach.


Figure 1
Histopathology of the Tongue in a Hamster Model of COVID-19

June 2024

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31 Reads

Objective With altered sense of taste being a common symptom of coronavirus disease 2019 (COVID-19), our objective was to investigate the presence and distribution of severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) within the tongue over the course of infection. Methods Golden Syrian hamsters were inoculated intranasally with SARS-CoV-2 and tongues were collected at 2, 3, 5, 8, 17, 21, 35, and 42 days post-infection (dpi) for analysis. In order to test for gross changes in the tongue, the papillae of the tongue were counted. Paraffin-embedded thin sections of the tongues were labeled for the presence of SARS-CoV-2 antigen. Results There was no difference in fungiform or filiform papillae density throughout the course of infection. SARS-CoV-2 antigen was observed in the circumvallate papillae taste buds (3–35 dpi) and autonomic ganglia (5–35 dpi), as well as in the serous and mucous salivary glands of the posterior tongue (2–42 dpi). Conclusion The presence and distribution of SARS-CoV-2 suggest that the virus could cause taste disturbance by infecting the circumvallate taste buds. This effect could be exacerbated by a diminished secretion of saliva caused by infection of the serous salivary glands and the autonomic ganglia which innervate them.


Generation of Pcdh15-deletion model mice by the CRISPR–Cas9 system
a Schematic representation illustrating the strategy employed for deleting the mouse Pcdh15 gene using the CRISPR–Cas9 system. The CRISPR–Cas9 knock-in approach aimed to insert a FLAG tag and a stop codon into the Mus musculus Pcdh15 (NCBI: NM_001142746.1, 9150 bp mRNA) exon 5 (594-754). A specific EcoRI digestion site was introduced solely in the mutant allele to enable genotyping through polymerase chain reaction. b Immunoblotting analysis confirming the deletion of full-length PCDH15 in the brains of Pcdh15-deletion mice. Each lane contains 50 μg of whole-brain extracts from adult WT, Pcdh15-het, and Pcdh15-null. Signal detection and quantification were performed using the Odyssey system by LI-COR Biosciences (Lincoln, Nebraska, US). The calculated molecular weight of the PCDH15 CD3 isoform is approximately 183 kDa, denoted by the red signal. The green signal represents the internal control GAPDH. c Confocal microscope image showing the structure of the inner ear in Pcdh15-null immediately after birth. Myosin (green) and phalloidin (red) co-staining reveals the cochlear morphology. d Immunohistochemical staining of the retina from Pcdh15-null. Retinas from 4-week-old Pcdh15-null, Pcdh15-het, and WT were stained with peanut agglutinin (PNA; green) and Recoverin (red). Normal formation of the photoreceptor and bipolar cell layers is observed in all genotypes, compared with Pde6brd1/rd1 mice that display retinal degeneration [28]. Pcdh15 protocadherin related 15, Pcdh15-het Pcdh15 heterozygous deletion mice, Pcdh15-null Pcdh15 homozygous deletion mice, WT wild-type mice.
Behavioral analyses of Pcdh15-het
a Locomotor activity test results depicting total activity during a 2-h measurement period (left), and activity recorded every 5 min (right). b Results of the prepulse inhibition (PPI) test. n = 15 for male WT mice, n = 15 for male Pcdh15-het in panels a and b. The data of locomotor activity test and PPI were analyzed using a two-way ANOVA. c Cliff avoidance test outcomes illustrating the percentage of cliff avoidance reaction (left) and the latency of falling from a cliff (right). n = 14 for male WT, n = 14 for male Pcdh15-het in panel 2c. Data are presented as the mean ± standard error of the mean (SEM). Student’s t-test was used for these analyses. ∗∗p < 0.01; ∗p < 0.05 indicate statistical significance. For additional information, please refer to Table 1.
Long-term activity and body temperature measurement with a miniature accelerometer: nano tag
a, b The presented data spans the light–dark (L–D) cycle of a mouse model, where the nano tag was intraperitoneally implanted and visualized through the nano tag Viewer software. Data for the first 15 days are displayed. The horizontal axis represents the time from ZT15 (00:00) to ZT15 (00:00) of the following day. The vertical axis histograms indicate activity levels per 5 min, whereas the line graphs depict body temperature. a represents WT No. 1 and b represents Pcdh15-null No. 1. Data for the other WT and Pcdh15-null (No. 2, 3, and 4) are shown in Supplementary Figure 4. c–f Three-dimensional surface plots created using MATLAB software (The MathWorks Inc., Natick, Massachusetts, USA) illustrate the activity and temperature fluctuations across time for the entire monitoring period. The color bars denote the intensity of each parameter: c activity in WT; d activity in Pcdh15-null; e body temperature in WT; and f body temperature in Pcdh15-null. g, h Mean ± SEM of 6-week data obtained from four WT and four Pcdh15-null; the data were measured throughout the L–D cycle and plotted against time. The vertical axis represents activity (g) or body temperature (h) in 10-min intervals, whereas the horizontal axis depicts time within a 24-h period. A statistical analysis of the activity levels or body temperature at each time point was conducted via multiple t-tests using the GraphPad Prism 8 software, indicating significant time intervals with P < 0.001. In terms of activity levels, Pcdh15-null mice exhibited increased activity compared with the controls at all time points from lights off until 30 min after the lights were turned back on. Regarding body temperature, significant differences were observed at all time points from 1 h 30 min after lights on to 1 h 30 min after lights off. ZT Zeitgeber time.
C-Fos mapping in the Pcdh15-null whole brain
a–d Results of automated analysis of c-Fos-positive cell distribution in mouse brains collected at ZT13 or ZT7. n = 3 for WT and n = 3 for Pcdh15-null. q value voxel maps comparing WT with Pcdh15-null (a) at ZT13 and (c) at ZT7. A-P: distance from bregma in mm. Bar plots illustrating the log2 fold-change in each brain region (b) at ZT13 and (d) at ZT7. Red voxels and bars indicate q < 0.05 and z > 0. Green voxels and bars indicate q < 0.05 and z < 0.
Comparison of behavioral changes between WT mice and the Pcdh15 heterozygous deletion mutant in each test.
Mice with deficiency in Pcdh15, a gene associated with bipolar disorders, exhibit significantly elevated diurnal amplitudes of locomotion and body temperature

May 2024

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127 Reads

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2 Citations

Translational Psychiatry

Genetic factors significantly affect the pathogenesis of psychiatric disorders. However, the specific pathogenic mechanisms underlying these effects are not fully understood. Recent extensive genomic studies have implicated the protocadherin-related 15 (PCDH15) gene in the onset of psychiatric disorders, such as bipolar disorder (BD). To further investigate the pathogenesis of these psychiatric disorders, we developed a mouse model lacking Pcdh15. Notably, although PCDH15 is primarily identified as the causative gene of Usher syndrome, which presents with visual and auditory impairments, our mice with Pcdh15 homozygous deletion (Pcdh15-null) did not exhibit observable structural abnormalities in either the retina or the inner ear. The Pcdh15-null mice showed very high levels of spontaneous motor activity which was too disturbed to perform standard behavioral testing. However, the Pcdh15 heterozygous deletion mice (Pcdh15-het) exhibited enhanced spontaneous locomotor activity, reduced prepulse inhibition, and diminished cliff avoidance behavior. These observations agreed with the symptoms observed in patients with various psychiatric disorders and several mouse models of psychiatric diseases. Specifically, the hyperactivity may mirror the manic episodes in BD. To obtain a more physiological, long-term quantification of the hyperactive phenotype, we implanted nano tag® sensor chips in the animals, to enable the continuous monitoring of both activity and body temperature. During the light-off period, Pcdh15-null exhibited elevated activity and body temperature compared with wild-type (WT) mice. However, we observed a decreased body temperature during the light-on period. Comprehensive brain activity was visualized using c-Fos mapping, which was assessed during the activity and temperature peak and trough. There was a stark contrast between the distribution of c-Fos expression in Pcdh15-null and WT brains during both the light-on and light-off periods. These results provide valuable insights into the neural basis of the behavioral and thermal characteristics of Pcdh15-deletion mice. Therefore, Pcdh15-deletion mice can be a novel model for BD with mania and other psychiatric disorders, with a strong genetic component that satisfies both construct and surface validity.


A Randomized Crossover Study in Single-Sided Deafness Comparing a Cartilage Conduction CROS System and an Air-Conduction CROS System

May 2024

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29 Reads

Otology & neurotology: official publication of the American Otological Society, American Neurotology Society [and] European Academy of Otology and Neurotology

Objective To investigate if cartilage conduction (CC) rerouting devices are noninferior to air-conduction (AC) rerouting devices for single-sided deafness (SSD) patients by measuring objective and subjective performance using speech-in-noise tests that resemble a realistic hearing environment, sound localization tests, and standardized questionnaires. Study Design Prospective, single-subject randomized, crossover study. Setting Anechoic room inside a university. Patients Nine adults between 21 and 58 years of age with severe or profound unilateral sensorineural hearing loss. Interventions Patients’ baseline hearing was assessed; they then used both the cartilage conduction contralateral routing of signals device (CC-CROS) and an air-conduction CROS hearing aid (AC-CROS). Patients wore each device for 2 weeks in a randomly assigned order. Main Outcome Measures Three main outcome measures were 1) speech-in-noise tests, measuring speech reception thresholds; 2) proportion of correct sound localization responses; and 3) scores on the questionnaires, “Abbreviated Profile of Hearing Aid Benefit” (APHAB) and “Speech, Spatial, and Qualities of Hearing Scale” with 12 questions (SSQ-12). Results Speech reception threshold improved significantly when noise was ambient, and speech was presented from the front or the poor-ear side with both CC-CROS and AC-CROS. When speech was delivered from the better-ear side, AC-CROS significantly improved performance, whereas CC-CROS had no significant effect. Both devices mainly worsened sound localization, whereas the APHAB and SSQ-12 scores showed benefits. Conclusion CC-CROS has noninferior hearing-in-noise performance except when the speech was presented to the better ear under ambient noise. Subjective measures showed that the patients realized the effectiveness of both devices.


Mice with deficiency in Pcdh15, a gene associated with bipolar disorders, exhibit significantly elevated diurnal amplitudes of locomotion and body temperature

December 2023

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47 Reads

Genetic factors significantly influence the pathogenesis of psychiatric disorders. However, the specific pathogenic mechanisms underlying these effects are not fully elucidated. Recent extensive genomic studies implicate the protocadherin related 15 ( PCDH15 ) gene in the onset of psychiatric disorders such as bipolar disorder (BD). To further investigate the pathogenesis of these psychiatric disorders, we developed a mouse model lacking Pcdh15 . Notably, although PCDH15 is primarily identified as the causative gene for Usher syndrome, which leads to visual and auditory impairments, our Pcdh15 homozygous deletion mice ( Pcdh15 -null) did not show observable structural abnormalities in either the retina or inner ear. However, the Pcdh15 heterozygous deletion mice ( Pcdh15 -het) exhibited enhanced spontaneous locomotor activity, reduced prepulse inhibition, and diminished cliff avoidance behavior. These observations aligned with symptoms observed in various psychiatric patients and certain psychiatric disease mouse models. Specifically, the hyperactivity may mirror manic episodes in BD. To achieve a more physiological, long-term quantification of the hyperactive phenotype, we implanted nano tag ® sensor chips in the animals, enabling continuous monitoring of both activity and body temperature. During the light-off period, Pcdh15 -null exhibited elevated activity and body temperature compared with those of wild-type mice (WT). However, we observed a decreased body temperature during the light-on period. Comprehensive brain activity was visualized using c-Fos mapping, assessed during the activity and temperature peak and trough. There was a stark contrast between the distribution of c-Fos expression in Pcdh15 -null and WT brains during both the light-on and light-off periods. These results provide valuable insights into the neural basis of the behavioral and thermal characteristics of Pcdh15 -deletion mice. Therefore, Pcdh15 -deletion mice can be a novel model for BD with mania and other psychiatric disorders, with a strong genetic component that satisfies both construct and surface validity.


Hearing and Hearing Loss Progression in Patients with GJB2 Gene Mutations: A Long-Term Follow-Up

November 2023

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46 Reads

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6 Citations

We aimed to investigate whether the degree of hearing loss with GJB2 mutations could be predicted by distinguishing between truncating and non-truncating mutations and whether the genotype could predict the hearing loss level. Additionally, we examined the progression of hearing loss in individuals monitored for over 2 years for an average of 6.9 years. The proportion of truncating mutations was higher in patients with profound and severe hearing loss, but it was not accurate enough to predict the degree of hearing loss. Via genotype analysis, mutations of the p.Arg143Trp variants were associated with profound hearing loss, while mutations of the p.Leu79Cysfs*3 allele exhibited a wide range of hearing loss, suggesting that specific genotypes can predict the hearing loss level. Notably, there were only three cases of progression in four ears, all of which involved the p.Leu79Cysfs*3 mutation. Over the long-term follow-up, 4000 Hz was significant, and there was a trend of progression at 250 Hz, suggesting that close monitoring at these frequencies during follow-up may be crucial to confirm progression. The progression of hearing loss was observed in moderate or severe hearing loss cases at the time of the initial diagnosis, emphasizing that children with this level of hearing loss need regular follow-ups.


Basic statistical analysis of “ENoG,” “the difference in NET,” “Yanagihara,” and “age” in patients with and without synkinesis using the Mann–Whitney U test. *p < .05.
Scatter plots of the relationship between “ENoG” and “the difference in NET,” “Ynagihara,” and “age” in patients with and without synkinesis. Red lines on the graphs indicate simple linear regression. The intercept and regression coefficient are denoted in the top right section of diagrams.
Receiver operating characteristic curve denoting the sensitivity and specificity of the Youden's index.
Predicting facial synkinesis using a machine learning (ML)‐based model fitted with parameters extracted from clinical data. FPR, false positive ratio; and TPR, true positive ratio. A, Receiver operating characteristic (ROC) curves of the logistic regression, random forest, k‐nearest neighbors, and gradient boost decision tree, along with the corresponding areas under the curve. B, ROC curves based on ML with logistic regression.
Predicting synkinesis caused by Bell's palsy or Ramsay Hunt syndrome using machine learning‐based logistic regression

August 2023

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37 Reads

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4 Citations

Objective To investigate whether machine learning (ML)‐based algorithms, namely logistic regression (LR), random forest (RF), k‐nearest neighbor (k‐NN), and gradient‐boosting decision tree (GBDT), utilizing early post‐onset parameters can predict facial synkinesis resulting from Bell's palsy or Ramsay Hunt syndrome more accurately than the conventional statistics‐based LR. Methods This retrospective study included 362 patients who presented to a facial palsy outpatient clinic. Median follow‐up of synkinesis‐positive and ‐negative patients was 388 (range, 177–1922) and 198 (range, 190–3021) days, respectively. Electrophysiological examinations were performed, and the rate of synkinesis in Bell's palsy and Ramsay Hunt syndrome was evaluated. Sensitivity and specificity were assessed using statistics‐based LR; and electroneurography (ENoG) value, the difference in the nerve excitability test (NET), and scores of the subjective Yanagihara scaling system were evaluated using early post‐onset parameters with ML‐based LR, RF, k‐NN, and GBDT. Results Synkinesis rate in Bell's palsy and Ramsay Hunt syndrome was 20.2% (53/262) and 40.0% (40/100), respectively. Sensitivity and specificity obtained with statistics‐based LR were 0.796 and 0.806, respectively, and the area under the receiver operating characteristic curve (AUC) was 0.87. AUCs measured using ML‐based LR of “ENoG,” “difference in NET,” “Yanagihara,” and all three components (“all”) were 0.910, 0.834, 0.711, and 0.901, respectively. Conclusion ML‐based LR model shows potential in predicting facial synkinesis probability resulting from Bell's palsy or Ramsay Hunt syndrome and has comparable reliability to the conventional statistics‐based LR. Level of Evidence 3.



Fig. 1 Auditory pathway anatomy. A Sound wave is transferred to the tympanic membrane. Stimulation is amplified by three tiny bones ("ossicles") and transferred to the inner ear through the oval window to the round window in the cochlea. Stimulation vibrates the basilar membrane in the cochlear duct (pale orange) and electrical stimuli converted in the Corti organ are transferred to the brain through the cochlear nerve (yellow). B Anatomical structures of the cochlear duct (black dashed squared in A). Membrane structures, including cochlear duct (pale orange), stria vascularis (red), spiral ligament (green),
Fig. 2 Three-dimensional structure of cytoskeleton labeled with F-actin. The cochlear duct cross-section is shown in the left top panel. Scala vestibule (single asterisk), scala media (double asterisk), and scala tympani (triple asterisk) are visualized in the cochlear duct. The two-dimensional images at several planes (A-E) are shown. The
Three-dimensional mouse cochlea imaging based on the modified Sca/eS using confocal microscopy

February 2023

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65 Reads

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6 Citations

Anatomical Science International

The three-dimensional stria vascularis (SV) and cochlear blood vessel structure is essential for inner ear function. Here, modified Sca/eS, a sorbitol-based optical-clearing method, was reported to visualize SV and vascular structure in the intact mouse cochlea. Cochlear macrophages as well as perivascular-resident macrophage-like melanocytes were detected as GFP-positive cells of the CX3CR1+/GFP mice. This study's method was effective in elucidating inner ear function under both physiological and pathological conditions.


Citations (24)


... However, these two cases did not report epilepsy. Subjects 54, 74, 89, and 98 had CNVs in other previously reported neurodevelopmental genes, including BFSP2, PCDH15, TRPM3, TPO, PDSS1, and SLCO1B1 [69][70][71][72][73][74]. Collectively, ten de novo CNVs identified in eight ASD individuals are either intragenic or affect one end of a gene, involving a total of ten candidate genes. ...

Reference:

Genetic Variant Analyses Identify Novel Candidate Autism Risk Genes from a Highly Consanguineous Cohort of 104 Families from Oman
Mice with deficiency in Pcdh15, a gene associated with bipolar disorders, exhibit significantly elevated diurnal amplitudes of locomotion and body temperature

Translational Psychiatry

... However, HL progression with age may also be due to variable exogenous (noise, ototoxic drugs, trauma, and harmful habits) and endogenous factors (age-related hearing loss and modifier genes) [80,81]. Currently, many studies have confirmed the progression of HL in patients with various biallelic pathogenic GJB2 variants [28,30,31,46,52,55,82,83]. A meta-analysis of 28 studies reporting HL progression data in 1,140 patients revealed that the average progression rate of DFNB1A was 18.7% (range: 0-56.0%) ...

Hearing and Hearing Loss Progression in Patients with GJB2 Gene Mutations: A Long-Term Follow-Up

... 36 Machine learning algorithms have shown some potential utility in predicting the likelihood of synkinesis development subsequent to Bell's palsy. 37 In accordance with the widespread adoption of TR services in a variety of conditions, 18 ...

Predicting synkinesis caused by Bell's palsy or Ramsay Hunt syndrome using machine learning‐based logistic regression

... Takaki et al. [3] focused on the drawbacks of conventional hearing aids, including discomfort and social acceptability, and proposed a bone-conduction-based method to alleviate these challenges. Because bone conduction transmits sound to the inner ear without the need for an earpiece, it has the potential to offer better comfort and privacy than conventional hearing aids. ...

asEars: Designing and Evaluating the User Experience of Wearable Assistive Devices for Single-Sided Deafness
  • Citing Conference Paper
  • April 2023

... Temporal bone 3D microanatomy is undergoing a renewed interest thanks to the availability of novel X-ray-based and fluorescence-based nondestructive methods of imaging (11). Although both imaging approaches produce similar results, fluorescence-based methods based on tissue clearing (12) allow labeling of cell populations or vascular and matrix components, which is essential for understanding physiological and pathological processes as well as immune cell distribution and interactions (13)(14)(15). In this study we mapped the 3D distribution of rat temporal bone marrow and its bone and vascular connections to the inner ear, dural and middle ear spaces, by employing iDISCO+ (16) based tissue clearing with immunostaining (13) and microCT. ...

Three-dimensional mouse cochlea imaging based on the modified Sca/eS using confocal microscopy

Anatomical Science International

... Despite the abundance of apoptotic newborn neurons in the hippocampus, there is limited information about the dynamic interaction between microglial processes and dying neurons, the time course of the engulfment process, and the digestion of phagolysosomal contents. This is partly attributed to the difficulty in visualizing unchallenged microglia in the deep subcortical regions, such as the DG (Kamei et al., 2022;Yang et al., 2010). Previous two-photon imaging studies of adult cortical microglia successfully revealed the dynamic behavior of ramified microglia in physiological conditions (Kondo et al., 2011). ...

In vivo Chronic Two-Photon Imaging of Microglia in the Mouse Hippocampus
  • Citing Article
  • July 2022

Journal of Visualized Experiments

... 45 In support of this, a SARS-CoV-2-neutralizing mAb delivered intranasally into mice resulted in a thirtyfold lower concentration of Ab in serum and higher lung lavage levels as compared to the same dose delivered intravenously. 47 Our preliminary analysis of human sIgA bioavailability in rodents is consistent with these observations and supports a daily dosing regimen of up to twice daily to maintain therapeutic levels (manuscript in preparation). In the context of respiratory mucosal infections like COVID-19, deposition and retention of a therapeutic such as LCTG-002 in the local mucosa is highly desirable. ...

Unbiased approach to identify and assess efficacy of human SARS-CoV-2 neutralizing antibodies

... Dysregulation of metabolic stress and ion homeostasis, consequences of mitochondrial impairment, may explain these fluctuations. This raises the possibility that metabolic-targeted therapies, such as cochlear vasodilators, antioxidants, or mitochondrial protective agents, may provide therapeutic benefits to specific m.3243A>G subpopulations [12][13][14]. Further studies are warranted to identify subgroups of patients who may derive clinical benefits from such interventions. ...

Role of Oxidative Stress and Antioxidants in Acquired Inner Ear Disorders

... Inflammatory responses triggered by the virus, such as vascular damage and immune-mediated injury to the inner ear, further exacerbate the damage. 5,6 While cochlear damage is the primary mechanism, retrocochlear or central involvement cannot be completely ruled out in severe cases. 7 Unfortunately, these long-term effects are often underdiagnosed and understated, leading to poor quality of life and further marginalization of affected individuals. ...

CD4 T-cell depletion prevents Lassa fever associated hearing loss in the mouse model

... Neuroinvasive and neurovirulent potential of SARS-CoV-2 in ferrets for increased activation is through indirect stimuli like proinflammatory cytokines caused by a systemic response to for example viral infection [40,41], or a combination of all above. Increased microglial activation upon SARS-CoV-2 infection was observed in patients and experimentally inoculated mice and hamsters, which are models for severe respiratory disease [7,11,17,[23][24][25][26][27][28]. Microglia play a crucial role in maintaining brain homeostasis in health and disease, synapse formation, neuronal proliferation, and brain development. ...

Prolonged and extended impacts of SARS-CoV-2 on the olfactory neurocircuit