Shinji Ueno’s research while affiliated with Hirosaki University and other places

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Publications (176)


Classification of fundus autofluorescence images based on macular function in retinitis pigmentosa using convolutional neural networks
  • Article

February 2025

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10 Reads

Japanese Journal of Ophthalmology

Taro Kominami

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Shinji Ueno

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Junya Ota

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To determine whether convolutional neural networks (CNN) can classify the severity of central vision loss using fundus autofluorescence (FAF) images and color fundus images of retinitis pigmentosa (RP), and to evaluate the utility of those images for severity classification. Retrospective observational study. Medical charts of patients with RP who visited Nagoya University Hospital were reviewed. Eyes with atypical RP or previous surgery were excluded. The mild group was comprised of patients with a mean deviation value of > − 10 decibels, and the severe group of < − 20 decibels, in the Humphrey field analyzer 10-2 program. CNN models were created by transfer learning of VGG16 pretrained with ImageNet to classify patients as either mild or severe, using FAF images or color fundus images. Overall, 165 patients were included in this study; 80 patients were classified into the severe and 85 into the mild group. The test data comprised 40 patients in each group, and the images of the remaining patients were used as training data, with data augmentation by rotation and flipping. The highest accuracies of the CNN models when using color fundus and FAF images were 63.75% and 87.50%, respectively. Using FAF images may enable the accurate assessment of central vision function in RP. FAF images may include more parameters than color fundus images that can evaluate central visual function.


ROC curves of 7 different combinations of parameters for predicting ACD < 2.70 mm. ROC curves of the different combinations of parameters for predicting ACD < 2.70 mm are plotted. ROC, receiver operating characteristic; SER, spherical equivalent refractive error; ACD, anterior chamber depth.
Assessment of factors affecting anterior chamber depth from data obtained from health checkup participants in Japan
  • Article
  • Full-text available

December 2024

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14 Reads

Measurement of anterior chamber depth (ACD), an important marker for the screening of primary angle-closure glaucoma, requires biometry, which is not readily used. This study assessed the relationship between ACD and health check-up data findings from participants with good corrected visual acuity in Japan. Participants underwent ophthalmic, anthropometric, and hematological assessments. The mean ACD of all 3060 participants was 3.33 ± 0.34 mm [2.22–4.72 mm]. Multivariable linear regression analysis was performed to determine factors that were significantly correlated with ACD, and logistic regression analysis was performed to predict ACD < 2.70 mm. Multivariable linear regression analysis showed that age, sex, intraocular pressure, spherical equivalent refractive error (SER), height, and fasting blood sugar levels significantly correlated with ACD (P < 0.05). Logistic regression analysis showed that age, sex, and SER were the best predictors of ACD < 2.70 mm. The area under receiving operator characteristic curves of ‘age and SER’ and ‘age, SER, and sex’ were 0.821 and 0.835, respectively, with no significant difference (P = 0.122). In conclusion, ACD correlates with several parameters, and age and SER may be particularly important for predicting ACD in participants undergoing health checkups. Supplementary Information The online version contains supplementary material available at 10.1038/s41598-024-82096-1.

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Evaluation of retinal arterioles in retinitis pigmentosa: Arterial lumen diameter reduced with retinal degeneration and wall thickness related to systemic condition

November 2024

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20 Reads

Retina

Purpose Retinal arterioles are attenuated in eyes with retinitis pigmentosa (RP), but dimensions such as lumen diameter (LD) and wall thickness (WT) have not been thoroughly investigated. This study aimed to determine the dimensions of reduced retinal arterioles in eyes with RP. Methods The study included 66 patients with RP (66 eyes) and 36 control participants (36 eyes) for whom adaptive optics (AO) recordings of the retinal arteries were available. LD and WT were measured on the AO images. The correlations between arteriole dimensions and clinical parameters were determined. Results The mean LD was significantly smaller in patients with RP than in controls, while the mean WT did not differ significantly. LD was significantly and positively correlated with the mean deviation (MD) of the Humphrey 10-2 field analyzer and ellipsoid zone (EZ) width. The WT and wall-to-lumen ratio were significantly and positively correlated with age and systolic blood pressure but not with MD and EZ width. Conclusion Retinal arteriole dimensions were significantly correlated with retinal degeneration and systemic factors.


Genetic etiology and clinical features of achromatopsia in Japan

May 2024

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41 Reads

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1 Citation

Retina

Purpose To ascertain the characteristics of achromatopsia (ACHM) in Japan by analyzing the genetic and phenotypic features of patients with ACHM. Methods The medical records of 52 patients from 47 Japanese families who were clinically diagnosed with ACHM were reviewed in this retrospective observational study. Results Thirty-six causative variants of ACHM were identified in 26 families via whole-exome sequencing (WES): PDE6C (12 families), CNGA3 (10 families), CNGB3 (two families), and GNAT2 (two families). However, none of the six causative variants that are known to cause ACHM, or the 281 other genes listed in RetNet, were observed in 19 families. A significant trend toward older age and worsening of ellipsoid zone disruption on optical coherence tomography images was observed ( P < 0.01). Progressive ellipsoid zone disruptions were observed in 13 eyes of seven patients during the follow-up visits. These patients harbored one or more variants in PDE6C . Conclusions The ACHM phenotype observed in this study was similar to those observed in previous reports; however, the causative gene variants differed from those in Europe. The low identification ratio of causative genes in WES suggests the presence of unique hot spots in Japanese patients with ACHM that were not detectable via ordinal WES.


Nationwide epidemiologic survey on incidence of macular dystrophy in Japan

April 2024

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21 Reads

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1 Citation

Japanese Journal of Ophthalmology

The aim of this study was to estimate the number of patients in Japan who had visited an ophthalmologist for macular dystrophy of various types, including Best vitelliform macular dystrophy (BVMD), Stargardt disease, occult macular dystrophy (OMD), cone (-rod) dystrophy, X-linked retinoschisis (XLRS), and central areolar choroid dystrophy (CACD). Nationwide epidemiologic survey Questionnaires were distributed to 965 major facilities, including all the university hospitals in Japan. The aim of the questionnaire was to determine the number of patients with each type of macular dystrophy who had visited an outpatient clinic during the past 5 years (January 2015 to December 2019). Over 70% of the patients were diagnosed and followed up at university hospitals. The estimated annual number of newly diagnosed cases was as follows: 55.3 for BVMD, 36.7 for Stargardt disease, 35.8 for OMD, 160.6 for cone (-rod) dystrophy, 31.0 for XLRS, 29.8 for CACD, and 174.1 for other types of macular dystrophy. The total number of patients with macular dystrophy diagnosed and followed at major institutions was estimated to be 6651. This was the first nationwide survey of macular dystrophy in Japan and provided an approximate number of affected patients. The diagnosis of macular dystrophy is primarily carried out at facilities with affiliated specialists, such as university hospitals. By examining the incidence of multiple diseases simultaneously, we were able to compare the incidence of each type of macular dystrophy.


Figure 1. Flow chart of the present retrospective study. RRD rhegmatogenous retinal detachment, MHRD macular hole retinal detachment.
Impact of drainage retinotomy on surgical outcomes of retinal detachment: insights from the Japan-Retinal Detachment Registry

April 2024

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125 Reads

We investigated the impact of drainage retinotomy on the outcome of pars plana vitrectomy for repair of rhegmatogenous retinal detachment (RRD). This study was a retrospective observational multicenter study. All patients were registered with the Japan-Retinal Detachment Registry. We analyzed 1887 eyes with RRD that had undergone vitrectomy and were observed for 6 months between February 2016 and March 2017. We compared the baseline characteristics and postoperative outcomes between eyes with and without drainage retinectomy. We then performed propensity score matching using preoperative findings as covariates to adjust for relevant confounders. Of 3446 eyes, 1887 met the inclusion criteria. Among them, 559 eyes underwent vitrectomy with drainage retinotomy, and 1328 eyes underwent vitrectomy without drainage retinotomy. After propensity score matching, each group comprised 544 eyes. There was no significant difference between the two groups in BCVA at 6 months after vitrectomy (0.181 vs. 0.166, P = 0.23), the primary anatomical success rate (6.3% vs. 4.4%, P = 0.22), or the rate of secondary surgery for ERM within 6 months (1.5% vs. 1.3%, P = 1.0). Drainage retinectomy does not increase the risk of decreased postoperative BCVA, surgical failure, or secondary surgery for ERM within six months outcomes.


Disease-specific variant interpretation highlighted the genetic findings in 2325 Japanese patients with retinitis pigmentosa and allied diseases

March 2024

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46 Reads

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5 Citations

Journal of Medical Genetics

Background: As gene-specific therapy for inherited retinal dystrophy (IRD) advances, unified variant interpretation across institutes is becoming increasingly important. This study aims to update the genetic findings of 86 retinitis pigmentosa (RP)-related genes in a large number of Japanese patients with RP by applying the standardised variant interpretation guidelines for Japanese patients with IRD (J-IRD-VI guidelines) built upon the American College of Medical Genetics and Genomics and the Association for Molecular Pathology rules, and assess the contribution of these genes in RP-allied diseases. Methods: We assessed 2325 probands with RP (n=2155, including n=1204 sequenced previously with the same sequencing panel) and allied diseases (n=170, newly analysed), including Usher syndrome, Leber congenital amaurosis and cone-rod dystrophy (CRD). Target sequencing using a panel of 86 genes was performed. The variants were interpreted according to the J-IRD-VI guidelines. Results: A total of 3564 variants were detected, of which 524 variants were interpreted as pathogenic or likely pathogenic. Among these 524 variants, 280 (53.4%) had been either undetected or interpreted as variants of unknown significance or benign variants in our earlier study of 1204 patients with RP. This led to a genetic diagnostic rate in 38.6% of patients with RP, with EYS accounting for 46.7% of the genetically solved patients, showing a 9% increase in diagnostic rate from our earlier study. The genetic diagnostic rate for patients with CRD was 28.2%, with RP-related genes significantly contributing over other allied diseases. Conclusion: A large-scale genetic analysis using the J-IRD-VI guidelines highlighted the population-specific genetic findings for Japanese patients with IRD; these findings serve as a foundation for the clinical application of gene-specific therapies.



Figure 1
Figure 3. RPGRIP1-ex18-DEL and exons 22-24 duplication in NISO143. (a) Family
Summary of clinical findings of patients with ACHM with RPGRIP1 exon18 deletion
A homozygous structural variant of RPGRIP1 is frequently associated with achromatopsia in Japanese patients with IRD

March 2024

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51 Reads

Genetics in Medicine Open

Purpose Achromatopsia (ACHM) is an early-onset cone dysfunction caused by 5 genes with cone-specific functions (CNGA3, CNGB3, GNAT2, PDE6C, and PDE6H) and by ATF6, a transcription factor with ubiquitous expression. To improve the relatively low variant detection ratio in these genes in a cohort of exome-sequenced Japanese patients with inherited retinal diseases (IRD), we performed genome sequencing to detect structural variants and intronic variants in patients with ACHM. Methods Genome sequencing of 10 ACHM pedigrees was performed after exome sequencing. Structural, non-coding, and coding variants were filtered based on segregation between the affected and unaffected in each pedigree. Variant frequency and predicted damage scores were considered in identifying pathogenic variants. Results A homozygous deletion involving exon 18 of RPGRIP1 was detected in 5 of 10 ACHM probands, and variant inheritance from each parent was confirmed. This deletion was relatively frequent (minor allele frequency = 0.0023) in the Japanese population but was only homozygous in patients with ACHM among the 199 Japanese IRD probands analyzed by the same genome sequencing pipeline. Conclusion The deletion involving exon 18 of RPGRIP1 is a prevalent cause of ACHM in Japanese patients and contributes to the wide spectrum of RPGRIP1-associated IRD phenotypes, from Leber congenital amaurosis to ACHM.


FIGURE 1 (A) Circumferential retinal hemorrhage, perimacular ischemic color (arrows), severe macular edema, and severe optic disc edema, suggesting central retinal vein occlusion (CRVO), branch retinal artery occlusion (BRAO), and papillitis. (B) Fluorescein angiography (FA) showing prolonged arm-toretina circulation and intra-retinal transitional times, perimacular filling defects (arrows), and blockage of fluorescein due to retinal hemorrhage in the right eye. (C) Optical coherence tomography (OCT) findings indicating severe macular edema and hyperintensity in the inner retina (arrow).
FIGURE 2 (A) Five months after the onset, gradual improvements in optic disc edema, macular edema, and retinal hemorrhage were noted. (B) Follow-up FA findings showing extensive non-perfusion areas, mainly on the nasal side, and leakage of fluorescein from the neovascular vessels on the superior nasal side. (C) After five months, thinning of the retina was particularly apparent between the optic disc and macula (arrow).
Case report: A case of unilateral combined central retinal vein occlusion, incomplete central retinal artery occlusion, and papillitis following a third dose of COVID-19 vaccination

February 2024

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13 Reads

Frontiers in Ophthalmology

Purpose The aim of this study was to present a case of severe visual loss due to retinal arteriovenous occlusion and papillitis in one eye following vaccination against coronavirus disease (COVID-19). Methods A 45-year-old man undergoing treatment for hypertension had severely reduced visual acuity in the right eye 1 day after receiving a third dose of a COVID-19 vaccine manufactured by Moderna. Clinical examination showed that the best-corrected visual acuity in the right eye was counting fingers. Other findings included circumferential retinal hemorrhage, perimacular ischemic color, severe macular edema, and severe optic disc swelling, indicating the presence of central retinal vein occlusion, incomplete central retinal artery occlusion, and papillitis. Based on the possibility of post-vaccination inflammation and/or abnormal immune response, three courses of steroid pulse therapy were administered, and the visual acuity slightly improved to 20/1,000. Results Three months after the onset of symptoms, macular edema disappeared; conversely, retinal thinning of the macula and extensive non-perfusion areas mainly on the nasal side were noted. Conclusion The findings in this case suggest that inflammation and abnormal immune response after receiving a COVID-19 vaccination may lead to combined retinal arteriovenous occlusion and papillitis.


Citations (76)


... RP typically presents with nyctalopia and peripheral vision loss secondary to rod photoreceptor degeneration, followed by loss of central vision secondary to cone photoreceptor loss [1]. Although the pathogenic genes of RP are highly diverse, pathogenic variants in the eyes shut homolog (EYS) gene are notably prevalent among East Asian populations, establishing EYS as a significant factor in RP's genetic landscape [4][5][6][7][8][9]. ...

Reference:

Fundus autofluorescence features specific for EYS-associated retinitis pigmentosa
Disease-specific variant interpretation highlighted the genetic findings in 2325 Japanese patients with retinitis pigmentosa and allied diseases
  • Citing Article
  • March 2024

Journal of Medical Genetics

... 56 The increase in scleral thickness, together with the alteration of collagen increases stiffness that alters venous drainage and decreasing trans-scleral protein fluid, has been attributed the potential responsibility for the development of angle-closure glaucoma, as well as other complications. 57 The normal thickness of the sclera ranges from 1.00 mm at the back to 0.3 mm at the insertion zone of the extraocular muscles, and values above 1.5 mm have been proposed as a marker of nanophthalmos. 58 Initially, scleral thickness could only be measured by invasive methods. ...

Pathogenic variants of MFRP and PRSS56 genes are major causes of nanophthalmos in Japanese patients
  • Citing Article
  • July 2023

Ophthalmic Genetics

... Missense variants located in the NTS-CTS linker and CTS region have a tendency to result in iris hypoplasia, whereas truncation variants are usually associated with complete aniridia, consistent with previous studies. 5,13,39,40 The mechanism behind missense variants resulting in non-aniridia phenotypes remains unclear, but it may relate to perturbation of the DNA-binding activity and alteration of transcription activity, 5,13,39,41,42 and variants in the NTS-CTS linker region have been reported to lead to a non-aniridia phenotype through altering the flexibility in the linker region and affecting DNA binding ability. 39 Additionally, missense variants in the CTS region were predominantly associated with isolated foveal hypoplasia in our previous study. ...

Functional Characteristics of Diverse PAX6 Mutations Associated with Isolated Foveal Hypoplasia

... Performing preoperative care to prevent complications is even more important in ISBCS, due to the potential for bilateral blindness-causing BSPOE. To minimize the risk of postoperative complications in ISBCS, complete aseptic separation of the first and second eye surgeries is absolutely needed, including using a separate surgical instrument set and different batches of fluids, viscoelastics, and disposable surgical instruments [5,18,32]. Intracameral antibiotics are also recommended as the final step during ISBCS to reduce the risk of intraocular infection [13,16]. ...

Bilateral simultaneous endophthalmitis after immediately sequential bilateral cataract surgery

American Journal of Ophthalmology Case Reports

... While past research indicated that cis-β-carotene is beneficial for the retina (20,21), some studies have found adverse effects. One year of treatment with Dunaliella containing cis-β-carotene adversely affects full-field electroretinography (ERG) amplitudes in patients with RDH5-related fundus albipunctatus and leads to damage to both cone and rod cells (22). The authors suggested that this may be related to the increased rate of 11-cis retinal photoisomerization, leading to elevated A2E accumulation (22,23). ...

One-Year Outcomes of Oral Treatment With Alga Capsules Containing Low Levels of 9-cis-β-Carotene in RDH5-Related Fundus Albipunctatus
  • Citing Article
  • June 2023

American Journal of Ophthalmology

... The p.(L464P) variant was located inside exon 12 of the POC1B. This is well-matched with previous studies that documented pathogenic variants in exon 12 (12,14,17) of the POC1B. Nevertheless, pathogenic variants were also observed in exons 3, 4, 7, 9, and 11 of POC1B (Supplementary Table S1). ...

A mild form of POC1B-associated retinal dystrophy with relatively preserved cone system function

Documenta Ophthalmologica

... The data published in a recent work by Hososhima et al. [15] allow comparing amplitude and kinetic characteristics of the current generated by the CrChR2 with I34, considering that CrChR2 data were obtained using heterologous expression in another cell line (ND7/23). The cells expressing CrChR2, when irradiated with the light at intensity of 2.7 mW/mm 2 , generated a current at holding potential of -60 mV with peak density of 32 ± 3.2 pA/pF, decreasing to the plateau level of 12 ± 1.1 pA/pF [15]. ...

A light-gated cation channel with high reactivity to weak light

... Most NIID cases with ocular symptoms have been shown to manifest after the age of 50 years, with the patients undergoing ophthalmological consultations at a later date [3,8,9,13]. However, the ocular symptoms in the present case started at the age of 28 years, with the subject immediately undergoing an ophthalmological evaluation. ...

NOTCH2NLC GGC repeat expansion causes retinal pathology with intranuclear inclusions throughout the retina and causes visual impairment

Acta Neuropathologica Communications

... Prompt identification and treatment of HZON is crucial to improve outcomes [13,14]. Despite that, those with extensive optic nerve damage leading to optic atrophy or those with concurrent ischemic optic neuropathy usually have poorer visual prognosis and outcome [8,9,15]. Our patient was treated with oral acyclovir and systemic steroids, and despite that, extensive damage occurred leaving him with a pale optic disc and a poor vision of hand motion only. ...

A case of herpes zoster ophthalmicus with optic neuritis of the total length of the optic nerve in the orbital space and ischemic optic neuropathy

American Journal of Ophthalmology Case Reports

... Developed countries have widely shared genetic profile and phenotype-genotype correlations in IRDs from different continents around the world, namely Europe [14][15][16][17][18][19][20][21] , Asia [22][23][24][25][26][27] , America 13,28-30 , Africa 31 and Oceania 32 . This has contributed to calculating the diagnostic yield of genetic testing in IRD, reporting new disease-causing variants and atypical presentations, as well as identifying ethnic and regional differences. ...

Genetic characterization of 1,210 Japanese pedigrees with inherited retinal diseases by whole‐exome sequencing