Shifeng Jin’s research while affiliated with Chinese Academy of Sciences and other places

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Publications (15)


Figure 1. Overview of PXRDGen. The purple arrow indicates the pre-training of the XRD encoder (PXE module).
Figure 2. Results of the PXRDGen model on the MP-20 dataset. (a) Top-k retrieval hit rates for various XRD encoders with different temperature coefficients in the PXE module. (b) Summary of the diffusion-based CSG module with various XRD encoders. Results of the (c) diffusion-based CSG module and (d) flow-based model, showing the match rate (columns) and RMSE (wine-red diamond markers). Additional details are provided in Supplementary Tables S1 and S2. (e) Match rates of the flow and diffusion models for 1 and 20 sample generations; the left side shows the match rate for all compounds, while the right side indicates the match rate for valid compounds. (f) Comparison of match rate and RMSE for candidate structure (1 sample) generated by the flow-CNN and diffusion-CNN models at different generative steps.
Figure 3. Structure solution using PXRDGen with lattice information. (a) Schematic diagram comparing the traditional method and CellNet for obtaining lattice parameters (L). (b) Performance of the flow-CNN module when provided with correct lattices versus not. The bottom section represents the match rate for all compounds, while the top section refers to the match rate for valid compounds. (c) The generation process of NaTiVS₄ with L jointly generated with Fi and correct L. (d) One-sample match rate of the flow-CNN module when using L predicted by CellNet. LN refers to selecting the best lattice from N predicted lattices by CellNet. The orange line represents the upper capability of CellNet combined with flow-CNN, where the best L is chosen by directly comparing it to the target L.
Figure 4. Examples of PXRDGen in Solving Challenging Structures. Application of PXRDGen in locating light elements amidst heavier ones is demonstrated in (a) Zr2Ni2H6, (b) Li6Au2S4 and (c) Sr2H8O6. PXRDGen's ability to distinguish between elements with similar atomic numbers is shown in (d) Mn2Fe2As2 and (e) Sr3Fe2Cu2Se2O5. In all cases, the Z represents that number of chemical formulas in a conventional cell.
Powder Diffraction Crystal Structure Determination Using Generative Models
  • Preprint
  • File available

October 2024

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97 Reads

Shifeng Jin

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Qi Li

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Rui Jiao

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[...]

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Accurate crystal structure determination is critical across all scientific disciplines involving crystalline materials. However, solving and refining crystal structures from powder X-ray diffraction (PXRD) data is traditionally a labor-intensive process that demands substantial expertise. Here we introduce PXRDGen, an end-to-end neural network that determines crystal structures by learning joint structural distributions from experimentally stable crystals and their PXRD, producing atomically accurate structures refined through PXRD data. PXRDGen integrates a pretrained XRD encoder, a diffusion/flow-based structure generator, and a Rietveld refinement module, solving structures with unparalleled accuracy in seconds. Evaluation on MP-20 dataset reveals a record high matching rate of 82% (1-sample) and 96% (20-samples) for valid compounds, with Root Mean Square Error (RMSE) approaching the precision limits of Rietveld refinement. PXRDGen effectively tackles key challenges in PXRD, such as the localization of light atoms, differentiation of neighboring elements, and resolution of overlapping peaks. Overall, PXRDGen marks a significant advancement in the automated determination of crystal structures from PXRD.

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Powder Diffraction Crystal Structure Determination Using Generative Models

September 2024

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42 Reads

Accurate crystal structure determination is critical across all scientific disciplines involving crystalline materials. However, solving and refining inorganic crystal structures from powder X-ray diffraction (PXRD) data is traditionally a labor-intensive and time-consuming process that demands substantial expertise. In this work, we introduce PXRDGen, an end-to-end neural network that determines crystal structures by learning joint structural distributions from experimentally stable crystals and their PXRD, producing atomically accurate structures refined through PXRD data. PXRDGen integrates a pretrained XRD encoder, a diffusion/flow-based structure generator, and a Rietveld refinement module, enabling the solution of structures with unparalleled accuracy in a matter of seconds. Evaluation on MP-20 inorganic dataset reveals a remarkable matching rate of 82% (1 sample) and 96% (20 samples) for valid compounds, with Root Mean Square Error (RMSE) approaching the precision limits of Rietveld refinement. PXRDGen effectively tackles key challenges in XRD, such as the precise localization of light atoms, differentiation of neighboring elements, and resolution of overlapping peaks. Overall, PXRDGen marks a significant advancement in the automated determination of crystal structures from powder diffraction data.




Two-Dimensional Pb Square Nets from Bulk ( R O) n Pb ( R = Rare Earth Metals, n = 1,2)

July 2023

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64 Reads

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3 Citations

Journal of the American Chemical Society

All two-dimensional (2D) materials of group IV elements from Si to Pb are stabilized by carrier doping and interface bonding from substrates except graphene which can be free-standing. The involvement of strong hybrid of bonds, adsorption of exotic atomic species, and the high concentration of crystalline defects are often unavoidable, complicating the measurement of the intrinsic properties. In this work, we report the discovery of seven kinds of hitherto unreported bulk compounds (RO)nPb (R = rare earth metals, n = 1,2), which consist of quasi-2D Pb square nets that are spatially and electronically detached from the [RO]δ+ blocking layers. The band structures of these compounds near Fermi levels are relatively clean and dominantly contributed by Pb, resembling the electron-doped free-standing Pb monolayer. The R2O2Pb compounds are metallic at ambient pressure and become superconductors under high pressures with much enhanced critical fields. In particular, Gd2O2Pb (9.1 μB/Gd) exhibits an interesting bulk response of lattice distortion in conjunction with the emergence of superconductivity and magnetic anomalies at a critical pressure of 10 GPa. Our findings reveal the unexpected facets of 2D Pb sheets that are considerably different from their bulk counterparts and provide an alternative route for exploring 2D properties in bulk materials.



Structural and electrochemical studies of Fe-doped Na3Mn2P3O11 cathode materials for sodium-ion batteries

November 2019

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78 Reads

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14 Citations

Journal of Alloys and Compounds

Due to the limited resources of lithium source and their high price, lithium-ion batteries (LIBs) cannot meet the demands of future large-scale energy storage. Sodium-ion batteries (SIBs) with advantages of the abundant sodium resources and low cost, are one of the most promising alternatives to LIBs. Here, we firstly synthesize a new manganese-based polyanionic compound (Na3Mn2P3O11) through a simple sol-gel method. The resolved crystal structure indicates that single-phase Na3Mn2P3O11 compound belongs to the orthorhombic structure. When tested as for cathodes, it displays a poor electrochemical performance with a potential window of 1.8–4.3 V (versus Na/Na⁺), caused by the Jahn-Teller effect of Mn³⁺ generated during charging process. In this context, a series of Fe-doped Na3Mn2-xFexP3O11 (0.1 ≤ x ≤ 0.5) are prepared to improve the electrochemical performance. Results indicate that Fe substitution of Mn in Na2Mn2-xFexP3O11 structure can not only enhance the electrochemical performance, but also increase conductivity and achieve fast reaction kinetics. Noticeably, when iron-doped amount is 0.4, Na3Mn1.6Fe0.4P3O11 exhibits the best cycling (62.7 mA h g⁻¹ at 0.1 C over 100 cycles) and rate performance (19.7 mA h g⁻¹ at 5 C).


Li4Na2CsB7O14: A New Edge-sharing [BO4]5- Tetrahedra Containing Borate with High Anisotropic Thermal Expansion

January 2019

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181 Reads

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46 Citations

Chemical Communications

Li4Na2CsB7O14 with unique edge-sharing [BO4]5- tetrahedra, unprecedented [B14O28]14- cluster and high anisotropic thermal expansion has been obtained under the atmospheric pressure condition, indicating the high-pressure-driven is not an essential prerequisite...


Efficient Heterojunctions via the In-Situ Self-Assembly of BiVO4 Quantum Dots on SiC Facets for Enhanced Photocatalysis

August 2018

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51 Reads

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18 Citations

ACS Applied Nano Materials

Constructing highly-efficient heterojunction for photogenerated charges separation is essential to photocatalysis for solar energy conversion. In this work, we prepare an efficient photocatalyst, SiC/QD-BiVO4 composite, through in-situ self-assemble method. This effective heterojunction is constructed by controlling QD-BiVO4 orientated deposition on certain facets of SiC. Efficient electron-hole separation is achieved by this heterojunction resulted from the following two effects. One is that the selective distribution of QD-BiVO4 on SiC facets, rather than random deposition, reduces the transfer path-length of photoexcited carriers. The other one is that the negative shift of conduction band of BiVO4 quantum dots increases the electric potential difference in built-in field, which accelerates the carriers transfer rate at the interface. Consequently, the O2 production is enhanced to 2096 μmol h-1 g-1 in SiC/QD-BiVO4 photocatalyst. Moreover, the degradation rate of RhB is doubled. Our work exhibits a rational route to prepare environmental-friendly photocatalytic material with potential applications.


K x (C 2 H 8 N 2 ) y Fe 2−z S 2 : synthesis, phase structure and correlation between K + intercalation and Fe depletion

March 2017

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114 Reads

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10 Citations

We report a new layered FeS compound Kx(C2H8N2)yFe2−zS2 synthesized by intercalating K and C2H8N2 into tetragonal FeS via a simple sonochemical route. This new compound crystallizes in a body-centered tetragonal unit cell, with the [K(C2H8N2)] and [FeS] layers alternately stacking along the c direction. The nominal concentration of K, x, can be adjusted from 0.25 to 0.45, and the lattices a and c contract from 3.6971(9) and 20.667(5) Å to 3.691(1) and 20.566(7) Å, respectively. When x < 0.25, the parent FeS is residual and when x > 0.45, K reacts with FeS directly to form K2Fe4S5 impurity. It is found that the C2H8N2 molecule has been co-intercalated in between the [FeS] layers along with K, evidenced by its content, y, having a linear dependence with x. Measurements indicate that Kx(C2H8N2)yFe2−zS2 is a semiconductor and it shows a weak ferrimagnetism below 50 K. More importantly, Fe depletion resulting from the charged K⁺ intercalation was revealed by composition analysis, which leads to the formation of disordered Fe vacancies in the [FeS] layers and hence hinders the enhancement of original superconductivity in the FeS parent.


Citations (9)


... In this study, a zero-dimensional indium(III)-based compound was reported, including a (4-bromobenzyl)triphenylphosphonium ( [6][7][8] Author contributions: All the authors have accepted responsibility for the entire content of this submitted manuscript and approved submission. ...

Reference:

Crystal structure of [(4-bromobenzyl)triphenylphosphonium] tetrabromidoindium(III), [C 25 H 21 BrP] + [InBr 4 ]
The crystal structure of bis(trimethylsulfoxonium) catena -poly[µ 2 -hexabromido-indium(III)sodium(I)] C 6 H 18 O 2 S 2 NaInBr 6

Zeitschrift für Kristallographie. New crystal structures

... Generally, the photocatalytic performance of materials can be significantly improved by increasing the specific surface area of the photocatalyst [27,28], promoting the migration of photogenerated electrons [29][30][31] and improving the utilization of visible light [26,32]. Inorganic photocatalysts are limited in activating persulfate due to the narrow spectrum response range, difficulty in regulating band structure and secondary pollution caused by metals [33][34][35][36][37]. In contrast, organic photocatalysts such as graphitic phase carbon nitride (g-C 3 N 4 ) [23], metal organic frameworks (MOFs) [38], covalent organic frameworks (COFs) [39], conjugated organic polymers (COPs) [40], have attracted more attention in activating persulfate due to the advantages of wide spectral response, easy surface functional modification, tunable photoelectric properties, high mineralization rate, safety and economy. ...

Efficient Heterojunctions via the In-Situ Self-Assembly of BiVO4 Quantum Dots on SiC Facets for Enhanced Photocatalysis
  • Citing Article
  • August 2018

ACS Applied Nano Materials

... The physical properties of FeS and FeTe are significantly different from FeSe, although they display the same anti-PbO structure. FeS was synthesized by hydrothermal method with T c~4 .5 K [7] and remained its tetragonal structure from room temperature to T c [8]. High pressure or chemical intercalation provides limited contribution to superconductivity, probably due to its peculiar structural characteristics and topology of Fermi surface [9][10][11][12][13][14]. Pure FeTe is non-superconducting, but exhibits antiferromagnetic ordering around 70 K [15]. ...

K x (C 2 H 8 N 2 ) y Fe 2−z S 2 : synthesis, phase structure and correlation between K + intercalation and Fe depletion

... nm, 如图 7(d)和(e)所示 [31] . 该结果引领了国内外相关研究, 后续相继出现了多 种有机分子插层FeSe的体系, 如吡啶(C 5 H 5 N) [33] , 肼 (N 2 H 4 ), 乙二胺(C 2 H 8 N 2 )和丙二胺 [34] , 其超导转变温 度为30~45 K. 最新的FeSe插层研究表明利用水热法和溶剂热 法能在中等温区(450 K)制备出新型LiOHFeSe(图 9(a)) [35] 和乙二胺插层FeSe的超导体, 如图9(b)和(d) 所示 [36] , 其超导转变温度为41和45 K. 在LiOHFeSe 体系中, 发现了超导与磁性共存的情况(图9(c)). 重 要的是, 在LiOHFeSe体系中可以生长出高质量的单 晶样品, 角分辨电子能谱的研究表明该体系的费米 面也是仅存在4个电子型的费米口袋 [37,38] , 与高温合 [29] ; (b) Na x (NH 3 )Fe 2 Se 2 的磁化率随温度变化曲线, 插图是低温下M-H曲线和电阻率随温度变化曲线 [29] ; (c) Li x (NH 3 )Fe 2 Se 2 的晶体结构示 意图 [30] ; (d), (e) K x (NH 3 ) y Fe 2 Se 2 体系中 3 个超导相的X射线图谱和晶面间距示意图 [31] Figure 7 (Color online) The FeSe-based superconductors prepared by liquid-NH 3 method. (a) The powder X-ray diffraction patterns of A x (NH 3 ) y Fe 2 Se 2 (A=Li, Na, K, Sr, Ba, Eu, etc.) [29] ; (b) the temperature dependence of magnetic susceptibility of Na x (NH 3 ) y Fe 2 Se 2 . ...

Two new parent compounds for FeSe-based superconducting phases

... As a consequence, the intraplane ferromagnetic Co-Co correlation is quite robust while the weaker interplane magnetic interaction is subjected to chemical tuning, in consistent with the extensive results from studies on the ternary transition metal chalcogenides. [23,26,28,31,[38][39][40][41] The Ruderman-Kittel-Kasuya-Yoshida (RKKY) exchange coupling which is very sensitive to the interlayer distance and electron density is suggested to explain the interplane interaction mechanism since all the ACo 2 X 2 members are metallic. The oscillatory character of the RKKY exchange constant makes the ferromagnetic and antiferromagnetic interlayer interactions both possible. ...

Ferromagnetic interlayer interaction in KCo2Se2-xSx (0≤ x ≤2) and its chemical origin
  • Citing Article
  • April 2016

Dalton Transactions

... Sodium-ion batteries (SIBs), which benefit from the high natural abundance of sodium and low cost, have emerged as a potentially more sustainable technology to complement lithium-ion counterparts 1,2 ; they are expected to have applications in cost-effective, large-scale, long-life, and high-security systems, such as electric vehicles of moderate range (≤ 300 km) or hybrid vehicles, and in stationary energy storage fields 2,3 . However, the safety of hard carbon (HC) as a commercially promising anode is restricted by its low voltage plateau (below 0.1 V vs. Na + /Na, close to the metal sodium plating voltage), and the cycle performance is also not yet satisfactory 4 . Similarly, the promising Ti-based layered oxides (e.g., sodium titanate), with a discharge voltage at~0.3 ...

Unraveling the storage mechanism in organic carbonyl electrodes for sodium-ion batteries

Science Advances

... In particular, the application of AlN-based devices is still immature and has attracted worldwide attention [5]. Many international scientific research institutions have tried a variety of methods to prepare AlN crystals, mainly including the amonothermal method [6], flux/solution growth [7], hydride vapor phase epitaxy (HVPE) [8], and physical vapor transport (PVT) [9]. After decades of research, the PVT method is recognized as a more effective method for preparing high-quality, large-size AlN crystals and has gradually become the mainstream process for AlN single crystal preparation. ...

Growth of AlN single crystals on 6H-SiC (0001) substrates with AlN MOCVD buffer layer
  • Citing Article
  • February 2012

Crystal Research and Technology

... Taking simple mean averages over all liquidstate temperature data, there are 2.68 (7) (7), indicating a distribution of, most-likely, 4-fold and 5-fold coordinated lithium sites, which are the coordination states observed in high-lithium borate crystal structures (Fig. 10). The mean nLiO = 4.57 (7) for liquid lithium pyroborate is very similar to that of the α-and β-Li4B2O5 crystal polymorphs 41 which have nLiO = 4.375 and 4.5 respectively, whilst it is slightly lower than observed in crystals of similar composition: 4.67 in lithium orthoborate Li3BO3, 42 or 4.83 in Li6B4O9 43 (Fig. 10b). The distribution of bonds in the liquid, ∼2.7 short (< 2.2 Å) and ∼1.9 longer (2.2 < rLiO < 2.7 Å), is similar to the 3 short + 2 longer bonds to oxygen found for some lithium sites in some of the crystal structures. ...

Structure of Li4B2O5: High-Temperature Monoclinic and Low-Temperature Orthorhombic Forms
  • Citing Article
  • January 2013

Journal of Solid State Chemistry