Sandrine Gomes’s research while affiliated with University of Clermont Auvergne and other places

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Publications (13)


Top-projection (a) and side-view (b) of an orthorhombic 2×2×2 HAp supercell with the hexagonal unit cell highlighted. O, Ca and H atoms are shown in red, green and white, respectively. Each PO4 group contains O(I), O(II) and two O(III) sites. Capital letters A-D indicate the location of the interstitial sites considered.
Domain of chemical stability of HAp represented by the limits of chemical potentials of Ca, P, H. Symbols P1–P11 correspond to points where three boundary phases coexists with the HAp crystal.
Illustration of neutral defect structures in Fe-HAp. For each defect, we show a top view of its location within supercell and a lateral view of its detailed atomic structure in the vicinity of ∼4 Å around the iron atom.
Energy level diagram based on the Khon-Sham states of Fe defects in HAp.
Illustration of the change in the local atomic structure of selected iron defects (ligands within ≲4 Å from the Fe atom are also depicted), following the capture of electrons or holes.

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Iron in Hydroxyapatite: Interstitial or Substitution Sites?
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November 2021

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296 Reads

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23 Citations

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Vladimir Bystrov

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Iron-doped hydroxyapatite (Fe-HAp) is regarded as a promising magnetic material with innate biocompatibility. Despite the many studies reported in the literature, a detailed theoretical description of Fe inclusions is still missing. There is even no consensual view on what kind of Fe defects take place in Fe-HAp—iron interstitial or calcium substitutions? In order to address these questions, we employ modern first-principles methodologies, including hybrid density functional theory, to find the geometry, electronic, magnetic and thermodynamic properties of iron impurities in Fe-HAp. We consider a total of 26 defect configurations, including substitutional (phosphorus and calcium sites) and interstitial defects. Formation energies are estimated considering the boundaries of chemical potentials in stable hydroxyapatite. We show that the most probable defect configurations are: Fe3+ and Fe2+ substitutions of Ca(I) and Ca(II) sites under Ca-poor conditions. Conversely, Fe interstitials near the edge of the hydroxyl channel are favored in Ca-rich material. Substitutional Fe on the P site is also a probable defect, and unlike the other forms of Fe, it adopts a low-spin state. The analysis of Fe K-XANES spectra available in the literature shows that Fe-HAp usually contains iron in different configurations.

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Figure 3. Thermal behaviors of XCOx-T RH samples. a: combined TGA (blue lines) and dilatometric curves (red lines) for 100COx-25 30 (solid lines) and 100COx-25 95 (dashed lines) samples. b: curves of the pre-heated 100COx-T RH (black: as-synthesized without pre-heat treatment, blue: 100°C, green: 200°C and red: 600°C) stored at 30% RH (solid lines) and 95% RH (dashed lines), c: idem for 67COx-T RH , d: idem for 33COx-T RH .
Figure 7. Comparison of the 27 Al MAS NMR spectra showing a) humidity effect (solid line: 100COx-25 30 , dashed line: 100COx-25 95 ), b) temperature effect (black: 100COx-25 30 , blue: 100COx-100 30 , green: 100COx-200 30 , red: 100COx-600 30 ) and c) COx amount effect (black: 100COx-25 30 , blue: 67COx-25 30 , green: 33COx-25 30 , red: 0COx-25 30 ).
Figure 10. Adsorption -desorption isotherms of nitrogen at 77 K for as-synthesized a) XCOx-25 30 (full lines) and b) XCOx-25 95 (dashed lines) geomaterials: 0COx-25 30 (red), 33COx-25 30 (green), 67COx-25 30 (blue) and 100COx-25 30 (black).
Quantitative analyses extracted from Rietveld refinement on XCOx-25 RH samples. Standard deviations are indicated in bracket.
Temperature stability of an argillite/K-geopolymer composite: Impact of argillite filler on dimensional behavior

March 2021

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126 Reads

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11 Citations

Open Ceramics

Pure model geopolymers present a promising potential for high-temperature binders for structural or coating applications. However, their well-known chemical stability, which can reach 1400°C in the case of K-activated geopolymer, is accompanied by deleterious dimensional behavior, with significant shrinkage on heating. The work in the present paper focuses on the impact of tailored calcined argillite added to geomaterial formulations for fireproofing applications. Calcined argillite acts both as a filler and a reagent, with a supplementary delayed reaction activated by humidity and heat. K-activation of a mix of one-third metakaolin with two-thirds calcined argillite enables the shrinkage rate to be limited, and is accompanied by improved self-healing during viscous creep (allowing to preserve mechanical resistance at high temperature). This composite formulation preserves chemical stability, improves physical behavior, and maintains interesting mesoporosity for hydric properties. These different aspects are beneficial for a high temperature application.


Temperature stability of a pure metakaolin based K‐geopolymer: Part 1. Variations in the amorphous mineral network

June 2020

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147 Reads

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12 Citations

The thermal behavior of a model MK based K‐geopolymer (Si/Al = 1.38 and K/Al = 0.68; obtained by alkaline activation of a very pure metakaolin) was investigated between room temperature and 1400°C in order to evaluate its potentiality for high‐temperature applications. The purpose of our study was to monitor the behavior of a geopolymer during a temperature rise in order to better understand its variations with respect to temperature. The works from the present paper focus only variations in the internal structure of the mineral matrix. The results presented here show that the amorphous mineral matrix is preserved up to 900°C. The results also show that there is a densification of the internal structure of tetrahedral network during heating, due to changes in the Q³ environments in fully‐connected Q⁴ for both silicates and aluminates. Thus, our work provides a new more precise vision of the 3D geopolymeric mineral matrix for which the silicoaluminous network is not exclusively composed of Q⁴ entities, contrary to what is frequently encountered in the literature before.


Temperature stability of a pure metakaolin based K‐geopolymer: Part 2. Variations in the mesoporous network and its rehydration stability

June 2020

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57 Reads

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4 Citations

The thermal behavior of a model MK‐based K‐geopolymer was investigated between room temperature and 1400°C in order to evaluate its potentiality for high‐temperature applications. The purpose of our study was to monitor the behavior of a geopolymer during a temperature rise in order to better understand its variations with respect to temperature. The works from the present paper focus only changes in the porous network; it follows a first part devoted to variations in the mineral matrix. The results obtained here show that the geopolymer material preserves its porous integrity up to 800°C, while maintaining the reversibility of water exchanges corresponding to about 25 weight percent. Together with the results of part 1, the findings of this study allow us to affirm that geopolymer materials are only very little affected by temperatures up to 800°C, or even 900°C (keeping its mesoporous amorphous structure).



Cu-doping of calcium phosphate bioceramics: From mechanism to the control of cytotoxicity

October 2017

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195 Reads

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113 Citations

Acta Biomaterialia

Statement of significance: Biphasic Calcium Phosphates (BCP) are bioceramics composed of hydroxyapatite (HAp, Ca10(PO4)6(OH)2) and beta-Tricalium Phosphate (β-TCP, Ca3(PO4)2). Because their chemical and mineral composition closely resembles that of the mineral component of bone, they are potentially interesting candidates for bone repair surgery. Doping can advantageously be used to improve their biological behaviors; however, it is important to describe the doping mechanism of BCP thoroughly in order to fully appraise the benefit of the doping process. The present paper scrutinizes in detail the incorporation of copper cation in order to correctly interpret the behavior of the Cu-doped bioceramic in biological fluid. The understanding of the copper doping mechanism, related to doping mechanism of others 3d-metal cations, makes it possible to explain the rates and kinetic of release of the dopant in biological medium. Finally, the knowledge of the behavior of the copper doped ceramic in biological environment allowed the tuning of its cytotoxicity properties. The present study resulted on pre-treated ceramic disks which have been evaluated as promising biocompatible ceramic for bone substitute and/or prosthesis coating: good adherence of bone marrow cells with good cell viability.


First-Row Transition Metal Doping in Calcium Phosphate Bioceramics: A Detailed Crystallographic Study

January 2017

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2,169 Reads

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78 Citations

Doped calcium phosphate bioceramics are promising materials for bone repair surgery because of their chemical resemblance to the mineral constituent of bone. Among these materials, BCP samples composed of hydroxyapatite (Ca10(PO4)6(OH)2) and β-TCP (Ca3(PO4)2) present a mineral analogy with the nano-multi-substituted hydroxyapatite bio-mineral part of bones. At the same time, doping can be used to tune the biological properties of these ceramics. This paper presents a general overview of the doping mechanisms of BCP samples using cations from the first-row transition metals (from manganese to zinc), with respect to the applied sintering temperature. The results enable the preparation of doped synthetic BCP that can be used to tailor biological properties, in particular by tuning the release amounts upon interaction with biological fluids. Intermediate sintering temperatures stabilize the doping elements in the more soluble β-TCP phase, which favors quick and easy release upon integration in the biological environment, whereas higher sintering temperatures locate the doping elements in the weakly soluble HAp phase, enabling a slow and continuous supply of the bio-inspired properties. An interstitial doping mechanism in the HAp hexagonal channel is observed for the six investigated cations (Mn²⁺, Fe³⁺, Co²⁺, Ni²⁺, Cu²⁺ and Zn²⁺) with specific characteristics involving a shift away from the center of the hexagonal channel (Fe³⁺, Co²⁺), cationic oxidation (Mn³⁺, Co³⁺), and also cationic reduction (Cu⁺). The complete crystallochemical study highlights a complex HAp doping mechanism, mainly realized by an interstitial process combined with calcium substitution for the larger cations of the series leading to potentially calcium deficient HAp.


Atomic scale modeling of iron-doped biphasic calcium phosphate bioceramics

December 2016

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153 Reads

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40 Citations

Acta Biomaterialia

Statement of significance: Biphasic calcium phosphates (BCPs) are bioceramics composed of hydroxyapatite (HAp, Ca10(PO4)6(OH)2) and beta-Tricalium Phosphate (β-TCP, Ca3(PO4)2). Because their chemical and mineral composition closely resembles that of the mineral component of bone, they are potentially interesting candidates for bone repair surgery. Doping can advantageously be used to improve their biological behaviors and/or magnetic properties; however, it is important to describe the doping mechanism of BCP thoroughly in order to fully appraise the benefit of the doping process. The present paper scrutinizes in detail the incorporation of ferric cation in order to correctly interpret the behavior of the iron-doped bioceramic in biological fluid. The temperature dependent mechanism has been fully described for the first time. And it clearly appears that temperature can be used to design the doping according to desired medical application: blood compatibility, remineralization, bactericidal or magnetic response.


Fig. 1 PV-isotherms of {ZIF-67 + water} system (a–c) effect of temperature; (d) effect of pause after successive cycling.  
Table 1 Energetic characteristics of ZIFs based systems upon compression-decompression cycle a
Fig. 2 Compression–decompression isotherms of (a) {ZIF-67 + mercury} and (b) {ZIF-8 + mercury} systems.  
Stability of zeolitic imidazolate frameworks: effect of forced water intrusion and framework flexibility dynamics

October 2015

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307 Reads

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47 Citations

Stability of metal-organic frameworks is one of the central issues for their successful usage in an increasingly wide range of applications. Particularly Zeolitic Imidazolate Frameworks (ZIFs) are known for their high stability. Herein we use the two most stable representatives ZIF-8 and ZIF-67 to show that the concomitant effect of pressure and temperature upon water intrusion/extrusion cycles is strikingly higher compared to the separate effects of either pressure or temperature and leads to previously unobserved irreversible structural changes. We also explore the effect of compression-decompression speed on the pronounced breathing effect of indicated ZIFs as part of high-pressure operation and show that framework relaxation time may be very long and should be taken into account for potential applications. This journal is


X-ray absorption spectroscopy shining (synchrotron) light onto the insertion of Zn2+ in calcium phosphate ceramics and its influence on their behaviour under biological conditions

January 2014

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166 Reads

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25 Citations

Journal of Materials Chemistry B

The present study gives a fine description of the Zn2+ location in Zn-doped Biphasic Calcium Phosphate (BCP) samples heat treated between 500 °C and 1100 °C. Structural considerations were used to explain the sample interactions with biological fluid (DMEM). X-ray Absorption Spectroscopy (XAS) experiments were used to characterize the powdered samples. The main results (1) indicate the presence of Zn2+ complexes physisorbed at the HAp surface for a sintering temperature of 500 °C, (2) confirm the insertion of Zn2+ into the β-TCP phase using a substitution mechanism for a sintering temperature around 700 °C, and (3) fully describe the insertion of Zn2+ into the HAp phase by an interstitial mechanism for heat treatment above 900 °C (composition Ca10Znx(PO4)6(OH)2−2xO2x; xmax 0.25). The formation of the linear O–Zn–O entity with dZn–O = 1.72(2) Å has been clearly evidenced by Fourier transform amplitude fitting in the R-space (Zn two-fold coordination unambiguously described for the first time). The mineralisation stimulatory effect of Zn2+ incorporated into BCP has been explained by two different mechanisms. For samples heat treated between 500 °C and 800 °C, the stimulatory effect is attributed to the presence of soluble Zn2+ species: Zn2+ physisorbed at the HAp surface for sintering treatment around 500 °C and Zn2+ incorporated into about 20 wt% (weight percent) of the soluble Zn-doped β-TCP phase for sintering treatment around 800 °C. A sintering temperature above 900 °C led to the formation of an extremely weakly soluble and well-crystallized Zn-doped HAp phase which acts by facilitating the nucleation of a calcium phosphate phase at its surface.


Citations (13)


... Substitutions in these positions should lead to different lattice distortions, and consequently to different properties of the resulting material, hence the study of the peculiarities of Mn insertion into the HAP crystal lattice is very important. To obtain this information, different modern theoretical methods for modeling were used, including methods of density functional theory (DFT) [28][29][30][31][32][33][34][35][36][37][38][39][40][41][42]. Among such approaches to the calculation of the HAP properties from first principles, modelling of the HAP unit cell as a single macromolecule by ab initio methods [43,44] was done using the B3LYP approach [35,45,46]. ...

Reference:

Study of manganese substitutions in hydroxyapatite using density functional theory methods: Optical and magnetic properties
Iron in Hydroxyapatite: Interstitial or Substitution Sites?

... The dilatometric curves demonstrated that the effect of the aluminosilicate used was noticeable only from a temperature of 900 °C. As has been previously observed [54,55], the geopolymer shows slight shrinkage between approximately 100 and 300 °C, ascribed to the water loss from the geopolymer matrix. In the temperature range from 300 to 900 °C, a slight expansion was observed for all geopolymer composites due to the compensation of the shrinkage of the geopolymer matrix to 1200 • C at a heating speed of 5 • C/min. ...

Temperature stability of an argillite/K-geopolymer composite: Impact of argillite filler on dimensional behavior

Open Ceramics

... These are typical isotherms for mesoporous materials. Similar adsorption-desorption curves when studying metakaolin-based GC materials were obtained in the work by Gomes et al. [43]. A characteristic H3-type hysteresis loop, typical of fractured inter-particle pores, is evident for the The nitrogen adsorption-desorption isotherms presented above, according to the IU-PAC classification, can be characterized as type-IV isotherms. ...

Temperature stability of a pure metakaolin based K‐geopolymer: Part 2. Variations in the mesoporous network and its rehydration stability

... Using 2% NK results in an enhancement for the matrix morphology and filling most of the formed pores where it acts as nucleation sites for accumulation [48,49] of the geopolymer constituents leading to the formation of three dimensional network (Fig. 8b). Increasing NK to 3% leads to formation of 6 Bulk density of alkali activated specimens enhanced with mixed ratio of nano materials, a nano-glass and nano-kaolin, b nano-silica fume and nano-kaolin agglomerates from NK and N-glass forming wide voids between the matrix binder and so hinder the formation of the geopolymer network as indicated from the micrograph (Fig. 8C) [51,52]. ...

Temperature stability of a pure metakaolin based K‐geopolymer: Part 1. Variations in the amorphous mineral network

... It is also an important building block in biominerals, e.g. in the bone mineral apatite and in CaCO 3 minerals to create for example the shells of molluscs, eggs and corals (e.g. 2,3 ). The conditions under which such biominerals are formed are complex and some of the biomineralization mechanisms remain unresolved. ...

Insights for OCP Identification and Quantification in the Context of Apatite Biomineralization
  • Citing Article
  • March 2020

CrystEngComm

... Cu-release kinetics of the evaluated samples is similar to the release of Cu-doped samples that can be found in the literature. Due to the good degradability of TCP and GB14, immediate and fast Cu-release can be observed followed by a slower release [12,50]. ...

Cu-doping of calcium phosphate bioceramics: From mechanism to the control of cytotoxicity
  • Citing Article
  • October 2017

Acta Biomaterialia

... The disappearance of the MnOOH phase is accompanied by the emergence of a small peak at 10.21°, which may result from the migration of Mn 3+ ions from the MnO 2 plane into the interlayer space, creating metal vacancies 52,53 . The presence of this peak is likely influenced by the relatively small ionic radius of high-spin Mn 3+ (0.64 Å) 54 . The overall peak alterations are reversible in the extraction procedure. ...

First-Row Transition Metal Doping in Calcium Phosphate Bioceramics: A Detailed Crystallographic Study

... Thus, in samples 5 and 6 the simultaneous replacement of calcium cations by iron cations and phosphate anions by a carbonate group could occur. Based on published data [26,28], substitution of the hydroxyl ion was observed only at high temperatures, which is associated with the formation of hydroxyl-group vacancies at these temperatures. ...

Atomic scale modeling of iron-doped biphasic calcium phosphate bioceramics

Acta Biomaterialia

... Under certain thermodynamic conditions (temperature and pressure), the liquid wets the porosities of the solid: the liquid is said to intrude the pores of the material. [7][8][9][10][11][12][13][14][15][16][17][18] Under suitable thermodynamic conditions, a wet porous material undergoes the reverse process, i.e., liquid extrusion. The whole process is defined as an intrusion/extrusion cycle. ...

Stability of zeolitic imidazolate frameworks: effect of forced water intrusion and framework flexibility dynamics

... Generally, the phase degradation of HAP and calcium deficient apatite transpires according to Eqs. (3) and (4) below. The inclusion of zinc in the calcium phosphates intends to deviate from the above mechanisms, which is well understood from the absence of degraded products like CaO in all the investigated compositions [47,48]. Whereas pure BCP sample indicates the formation of degradation product in the form of allotropic β→α-TCP transformation at 1300 °C [49]. ...

X-ray absorption spectroscopy shining (synchrotron) light onto the insertion of Zn2+ in calcium phosphate ceramics and its influence on their behaviour under biological conditions

Journal of Materials Chemistry B