Sabina Alam’s research while affiliated with Taylor & Francis Group and other places

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Publications (15)


(Re?)Building trust in research integrity
  • Article
  • Full-text available

October 2023

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46 Reads

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1 Citation

Information Services & Use

Sabina Alam

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Rachel Burley

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Chris Graf

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[...]

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Damian Pattinson

This article is based on a session with the same title from the 2023 APE (Academic Publishing in Europe) conference, in which the authors discussed the challenges and opportunities for the scholarly communications community to improve trust in the quality of research it funds, publishes, and uses. They provide here a brief summary of the discussion, including: how much trouble is research integrity in? Who should be responsible for addressing it? Do we need less technology or more? Is better peer review the answer; if so, what does that look like? What other aspects of the research process should we be considering? Does the existing research infrastructure support these changes, or is further investment needed?

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Enhancing Partnerships of Institutions and Journals to Address Concerns About Research Misconduct: Recommendations From a Working Group of Institutional Research Integrity Officers and Journal Editors and Publishers

June 2023

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22 Reads

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10 Citations

JAMA Network Open

Importance: Institutions and journals strive to promote and protect the integrity of the research record, and both groups are equally committed to ensuring the reliability of all published data. Observations: Three US universities coordinated a series of virtual meetings from June 2021 to March 2022 for a working group composed of senior, experienced US research integrity officers (RIOs), journal editors, and publishing staff who are familiar with managing issues of research integrity and publication ethics. The goal of the working group was to improve the collaboration and transparency between institutions and journals to ensure that research misconduct and publication ethics are managed properly and efficiently. Recommendations address the following: identifying proper contacts at institutions and journals, specifying information to share between institutions and journals, correcting the research record, reconsideration of some fundamental research misconduct concepts, and journal policy changes. The working group identified 3 key recommendations to be adopted and implemented to change the status quo for better collaboration between institutions and journals: (1) reconsideration and broadening of the interpretation by institutions of the need-to-know criteria in federal regulations (ie, confidential or sensitive information and data are not disclosed unless there is a need for an individual to know the facts to perform specific jobs or functions), (2) uncoupling the evaluation of the accuracy and validity of research data from the determination of culpability and intent of the individuals involved, and (3) initiating a widespread change for the policies of journals and publishers regarding the timing and appropriateness for contacting institutions, either before or concurrently under certain conditions, when contacting the authors. Conclusions and relevance: The working group recommends specific changes to the status quo to enable effective communication between institutions and journals. Using confidentiality clauses and agreements to impede sharing does not benefit the scientific community nor the integrity of the research record. However, a careful and informed framework for improving communications and sharing information between institutions and journals can foster better working relationships, trust, transparency, and most importantly, faster resolution to data integrity issues, especially in published literature.


The ARRIVE guidelines 2.0: Updated guidelines for reporting animal research

July 2020

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444 Reads

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380 Citations

Reproducible science requires transparent reporting. The ARRIVE guidelines (Animal Research: Reporting of In Vivo Experiments) were originally developed in 2010 to improve the reporting of animal research. They consist of a checklist of information to include in publications describing in vivo experiments to enable others to scrutinise the work adequately, evaluate its methodological rigour, and reproduce the methods and results. Despite considerable levels of endorsement by funders and journals over the years, adherence to the guidelines has been inconsistent, and the anticipated improvements in the quality of reporting in animal research publications have not been achieved. Here, we introduce ARRIVE 2.0. The guidelines have been updated and information reorganised to facilitate their use in practice. We used a Delphi exercise to prioritise and divide the items of the guidelines into 2 sets, the “ARRIVE Essential 10,” which constitutes the minimum requirement, and the “Recommended Set,” which describes the research context. This division facilitates improved reporting of animal research by supporting a stepwise approach to implementation. This helps journal editors and reviewers verify that the most important items are being reported in manuscripts. We have also developed the accompanying Explanation and Elaboration document, which serves (1) to explain the rationale behind each item in the guidelines, (2) to clarify key concepts, and (3) to provide illustrative examples. We aim, through these changes, to help ensure that researchers, reviewers, and journal editors are better equipped to improve the rigour and transparency of the scientific process and thus reproducibility.


The ARRIVE guidelines 2.0: Updated guidelines for reporting animal research*

July 2020

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192 Reads

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1,536 Citations

Journal of cerebral blood flow and metabolism: official journal of the International Society of Cerebral Blood Flow and Metabolism

Reproducible science requires transparent reporting. The ARRIVE guidelines (Animal Research: Reporting of In Vivo Experiments) were originally developed in 2010 to improve the reporting of animal research. They consist of a checklist of information to include in publications describing in vivo experiments to enable others to scrutinise the work adequately, evaluate its methodological rigour, and reproduce the methods and results. Despite considerable levels of endorsement by funders and journals over the years, adherence to the guidelines has been inconsistent, and the anticipated improvements in the quality of reporting in animal research publications have not been achieved. Here, we introduce ARRIVE 2.0. The guidelines have been updated and information reorganised to facilitate their use in practice. We used a Delphi exercise to prioritise and divide the items of the guidelines into 2 sets, the “ARRIVE Essential 10,” which constitutes the minimum requirement, and the “Recommended Set,” which describes the research context. This division facilitates improved reporting of animal research by supporting a stepwise approach to implementation. This helps journal editors and reviewers verify that the most important items are being reported in manuscripts. We have also developed the accompanying Explanation and Elaboration document, which serves (1) to explain the rationale behind each item in the guidelines, (2) to clarify key concepts, and (3) to provide illustrative examples. We aim, through these changes, to help ensure that researchers, reviewers, and journal editors are better equipped to improve the rigour and transparency of the scientific process and thus reproducibility.


The ARRIVE guidelines 2.0: Updated guidelines for reporting animal research

July 2020

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220 Reads

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2,331 Citations

Reproducible science requires transparent reporting. The ARRIVE guidelines (Animal Research: Reporting of In Vivo Experiments) were originally developed in 2010 to improve the reporting of animal research. They consist of a checklist of information to include in publications describing in vivo experiments to enable others to scrutinise the work adequately, evaluate its methodological rigour, and reproduce the methods and results. Despite considerable levels of endorsement by funders and journals over the years, adherence to the guidelines has been inconsistent, and the anticipated improvements in the quality of reporting in animal research publications have not been achieved. Here, we introduce ARRIVE 2.0. The guidelines have been updated and information reorganised to facilitate their use in practice. We used a Delphi exercise to prioritise and divide the items of the guidelines into 2 sets, the “ARRIVE Essential 10,” which constitutes the minimum requirement, and the “Recommended Set,” which describes the research context. This division facilitates improved reporting of animal research by supporting a stepwise approach to implementation. This helps journal editors and reviewers verify that the most important items are being reported in manuscripts. We have also developed the accompanying Explanation and Elaboration (E&E) document, which serves (1) to explain the rationale behind each item in the guidelines, (2) to clarify key concepts, and (3) to provide illustrative examples. We aim, through these changes, to help ensure that researchers, reviewers, and journal editors are better equipped to improve the rigour and transparency of the scientific process and thus reproducibility.


ARRIVE Essential 10
ARRIVE Recommended Set
The ARRIVE guidelines 2.0: Updated guidelines for reporting animal research

July 2020

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741 Reads

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3,871 Citations

Reproducible science requires transparent reporting. The ARRIVE guidelines (Animal Research: Reporting of In Vivo Experiments) were originally developed in 2010 to improve the reporting of animal research. They consist of a checklist of information to include in publications describing in vivo experiments to enable others to scrutinise the work adequately, evaluate its methodological rigour, and reproduce the methods and results. Despite considerable levels of endorsement by funders and journals over the years, adherence to the guidelines has been inconsistent, and the anticipated improvements in the quality of reporting in animal research publications have not been achieved. Here, we introduce ARRIVE 2.0. The guidelines have been updated and information reorganised to facilitate their use in practice. We used a Delphi exercise to prioritise and divide the items of the guidelines into 2 sets, the “ARRIVE Essential 10,” which constitutes the minimum requirement, and the “Recommended Set,” which describes the research context. This division facilitates improved reporting of animal research by supporting a stepwise approach to implementation. This helps journal editors and reviewers verify that the most important items are being reported in manuscripts. We have also developed the accompanying Explanation and Elaboration (E&E) document, which serves (1) to explain the rationale behind each item in the guidelines, (2) to clarify key concepts, and (3) to provide illustrative examples. We aim, through these changes, to help ensure that researchers, reviewers, and journal editors are better equipped to improve the rigour and transparency of the scientific process and thus reproducibility.


ARRIVE Essential 10 (Continued)
ARRIVE Recommended Set
The ARRIVE guidelines 2.0: Updated guidelines for reporting animal research

July 2020

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1,123 Reads

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1,378 Citations

BMC Veterinary Research

Reproducible science requires transparent reporting. The ARRIVE guidelines (Animal Research: Reporting of In Vivo Experiments) were originally developed in 2010 to improve the reporting of animal research. They consist of a checklist of information to include in publications describing in vivo experiments to enable others to scrutinise the work adequately, evaluate its methodological rigour, and reproduce the methods and results. Despite considerable levels of endorsement by funders and journals over the years, adherence to the guidelines has been inconsistent, and the anticipated improvements in the quality of reporting in animal research publications have not been achieved. Here, we introduce ARRIVE 2.0. The guidelines have been updated and information reorganised to facilitate their use in practice. We used a Delphi exercise to prioritise and divide the items of the guidelines into 2 sets, the “ARRIVE Essential 10,” which constitutes the minimum requirement, and the “Recommended Set,” which describes the research context. This division facilitates improved reporting of animal research by supporting a stepwise approach to implementation. This helps journal editors and reviewers verify that the most important items are being reported in manuscripts. We have also developed the accompanying Explanation and Elaboration document, which serves (1) to explain the rationale behind each item in the guidelines, (2) to clarify key concepts, and (3) to provide illustrative examples. We aim, through these changes, to help ensure that researchers, reviewers, and journal editors are better equipped to improve the rigour and transparency of the scientific process and thus reproducibility.


The ARRIVE guidelines 2.0: updated guidelines for reporting animal research

July 2020

·

189 Reads

·

459 Citations

Reproducible science requires transparent reporting. The ARRIVE guidelines (Animal Research: Reporting of In Vivo Experiments) were originally developed in 2010 to improve the reporting of animal research. They consist of a checklist of information to include in publications describing in vivo experiments to enable others to scrutinise the work adequately, evaluate its methodological rigour, and reproduce the methods and results. Despite considerable levels of endorsement by funders and journals over the years, adherence to the guidelines has been inconsistent, and the anticipated improvements in the quality of reporting in animal research publications have not been achieved. Here, we introduce ARRIVE 2.0. The guidelines have been updated and information reorganised to facilitate their use in practice. We used a Delphi exercise to prioritise and divide the items of the guidelines into 2 sets, the ‘ARRIVE Essential 10,’ which constitutes the minimum requirement, and the ‘Recommended Set,’ which describes the research context. This division facilitates improved reporting of animal research by supporting a stepwise approach to implementation. This helps journal editors and reviewers verify that the most important items are being reported in manuscripts. We have also developed the accompanying Explanation and Elaboration document, which serves (1) to explain the rationale behind each item in the guidelines, (2) to clarify key concepts, and (3) to provide illustrative examples. We aim, through these changes, to help ensure that researchers, reviewers, and journal editors are better equipped to improve the rigour and transparency of the scientific process and thus reproducibility.


Reporting animal research: Explanation and elaboration for the ARRIVE guidelines 2.0

July 2020

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957 Reads

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1,996 Citations

Improving the reproducibility of biomedical research is a major challenge. Transparent and accurate reporting is vital to this process; it allows readers to assess the reliability of the findings and repeat or build upon the work of other researchers. The ARRIVE guidelines (Animal Research: Reporting In Vivo Experiments) were developed in 2010 to help authors and journals identify the minimum information necessary to report in publications describing in vivo experiments. Despite widespread endorsement by the scientific community, the impact of ARRIVE on the transparency of reporting in animal research publications has been limited. We have revised the ARRIVE guidelines to update them and facilitate their use in practice. The revised guidelines are published alongside this paper. This explanation and elaboration document was developed as part of the revision. It provides further information about each of the 21 items in ARRIVE 2.0, including the rationale and supporting evidence for their inclusion in the guidelines, elaboration of details to report, and examples of good reporting from the published literature. This document also covers advice and best practice in the design and conduct of animal studies to support researchers in improving standards from the start of the experimental design process through to publication.


The ARRIVE guidelines 2.0: Updated guidelines for reporting animal research

July 2020

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295 Reads

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363 Citations

BMJ Open Science

Reproducible science requires transparent reporting. The ARRIVE guidelines (Animal Research: Reporting of In Vivo Experiments) were originally developed in 2010 to improve the reporting of animal research. They consist of a checklist of information to include in publications describing in vivo experiments to enable others to scrutinise the work adequately, evaluate its methodological rigour and reproduce the methods and results. Despite considerable levels of endorsement by funders and journals over the years, adherence to the guidelines has been inconsistent, and the anticipated improvements in the quality of reporting in animal research publications have not been achieved. Here, we introduce ARRIVE 2.0. The guidelines have been updated and information reorganised to facilitate their use in practice. We used a Delphi exercise to prioritise and divide the items of the guidelines into two sets, the ‘ARRIVE Essential 10’, which constitutes the minimum requirement, and the ‘Recommended Set’, which describes the research context. This division facilitates improved reporting of animal research by supporting a stepwise approach to implementation. This helps journal editors and reviewers verify that the most important items are being reported in manuscripts. We have also developed the accompanying Explanation and Elaboration document, which serves (1) to explain the rationale behind each item in the guidelines, (2) to clarify key concepts and (3) to provide illustrative examples. We aim, through these changes, to help ensure that researchers, reviewers and journal editors are better equipped to improve the rigour and transparency of the scientific process and thus reproducibility.


Citations (15)


... A implementação de boas práticas de GD é desafiadora, pois pesquisadores enfrentam dificuldades em cumprir legislações que assegurem a reprodutibilidade e integridade dos dados, fundamentais para atender requisitos legais e critérios epistêmicos rigorosos [5,6] . Algumas plataformas, pagas ou gratuitas, oferecem sistemas de PGD que permitem aos pesquisadores preencher informações, especialmente em projetos financiados [7] . ...

Reference:

Gestão de dados em pesquisas científicas: abordagens éticas e práticas de integridade
(Re?)Building trust in research integrity

Information Services & Use

... This working group made three recommendations to promote collaboration between institutions and journals: "(1) reconsideration and broadening of the interpretation by institutions of the need-to know criteria in federal regulations (i.e., confidential or sensitive information and data are not disclosed unless there is a need for an individual to know the facts to perform specific jobs or functions), (2) uncoupling the evaluation of the accuracy and validity of research data from the determination of culpability and intent of the individuals involved, and (3) initiating a widespread change for the policies of journals and publishers regarding the timing and appropriateness for contacting institutions, either before or concurrently under certain conditions, when contacting the authors." 18 Another avenue is for the journal to contact the research funder, although we have rarely found funders to be particularly helpful in this role. Delays in retraction occur because authors can be unresponsive, disagree with the allegations, or request repeated extensions. ...

Enhancing Partnerships of Institutions and Journals to Address Concerns About Research Misconduct: Recommendations From a Working Group of Institutional Research Integrity Officers and Journal Editors and Publishers
  • Citing Article
  • June 2023

JAMA Network Open

... The reporting of this study conforms to ARRIVE 2.0 guidelines. 23 Experiments were approved by and performed on July 04, 2024, in accordance with the Ethics Committee of the North Sichuan Medical College (Approval no. 2025019). ...

The ARRIVE guidelines 2.0: Updated guidelines for reporting animal research

BMJ Open Science

... Piglets' health was monitored daily, with veterinary care provided as needed. Housing conditions adhered to animal welfare guidelines, with a temperature range of 28-31°C, humidity between 60 and 70%, and a 12 h light/ dark cycle, to minimize environmental stress (24). After 10 days of The overview of experimental design. ...

The ARRIVE guidelines 2.0: Updated guidelines for reporting animal research

... Guidelines for the ethical review of laboratory animal welfare (China, GB/T 35892-2018) and ARRIVE guidelines were also followed. 33 Twenty Kunming (KM) mice were randomly divided into four experimental groups to evaluate drug safety. Mice were treated via intraperitoneal (i.p.) injection for three consecutive days as follows: Group K1 (control) received normal saline, Group K2 received m 3 Exos (25 mg/kg/day), Group K3 received DNR (5 mg/kg/day), and Group K4 received m 3 Exos@DNR (25 mg/kg/day, containing approximately 5 mg/kg/day of DNR). ...

The ARRIVE guidelines 2.0: updated guidelines for reporting animal research

... 2017-15-0201-01262). The study was planned according to PREPARE guidelines [58], and it will be reported according to ARRIVE guidelines [59,60]. ...

Reporting animal research: Explanation and elaboration for the ARRIVE guidelines 2.0

... Preclinical immunological investigations of bone substitutes using rodents may help characterize innate and acquired immune systems. While the innate immune responses are often addressed, the cell-mediated host-tissue responses to natural ECM products could be characterized by analyzing the mononuclear cell infiltrates and T-cell responses, evidence of systemic inflammation, and immunological injury in immune-related organs, including the spleen, liver, and kidney [14]. ...

The ARRIVE guidelines 2.0: Updated guidelines for reporting animal research

... The secondary endpoint involves assessing the system's initialization and calibration in an OR setting, measuring both the time required for these processes and the calibration error. Here, the description of the in-vivo study follows the ARRIVE 2.0 guidelines [20][21][22] . This paper is structured as follows: Section "Materials and methods" provides a brief overview of the EVA surgical navigation system and describes the study design and protocol. ...

The ARRIVE guidelines 2.0: Updated guidelines for reporting animal research

... Neither risk of bias nor quality assessment were pre-planned. However, we reached a decision to assess the reporting quality based on the ARRIVE 2.0 guidelines [37,38]. There were no other deviations from the intended methodology as outlined in the protocol. ...

The ARRIVE guidelines 2.0: Updated guidelines for reporting animal research*

Journal of cerebral blood flow and metabolism: official journal of the International Society of Cerebral Blood Flow and Metabolism

... Reagents, materials, and experimental animals PPD 20 . Animals were not fasted or sedated for any drug administration or blood collection events. ...

The ARRIVE guidelines 2.0: Updated guidelines for reporting animal research

BMC Veterinary Research