Richard G. Pearson’s research while affiliated with James Cook University and other places

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Publications (162)


Relationship between mean water temperature during the DecoDiv experiment (left y‐axis, °C; and right y‐axis, the inverse of absolute temperature [T, in K] and the Boltzmann constant [k]) and absolute latitude degrees (left panel) and map showing the global distribution of study sites (right panel) sorted by life zones (Holdridge 1967). Map lines delineate study areas and do not necessarily depict accepted national boundaries.
Mean decomposition rates of the six studied litter mixtures in fine‐mesh (a–c) and coarse‐mesh litterbags (d–f) across 41 globally distributed study sites. Relationships are between decomposition rate per day and stream temperature in °C (a, d); between the natural logarithm of decomposition rate per day and stream temperature expressed in terms of the metabolic theory of ecology as the inverse of absolute temperature (T, in K) and the Boltzmann constant (k), being the slopes equal to the TS in eV (b, e); and between temperature‐normalized decomposition rate (i.e., per degree day) and absolute latitude (c, f). This figure revisits Boyero et al. (2011)—figure 2, using the same layout for the panels.
Relationship between the natural logarithm of decomposition rate per day and stream temperature expressed in terms of the metabolic theory of ecology, for the six studied litter mixtures (a‐f) in fine‐mesh (light grey) and coarse‐mesh litterbags (dark grey), across 41 globally distributed study sites. The slopes equal the TS in eV. See further information in Table S2.
Relationships between the TS of microbial (a and b) and total decomposition (c and d) and the litter quality index (LQI) and litter trait diversity measured by the RaoQ index.
Relative contribution of microbial decomposers and detritivores to decomposition by means of the total to microbial decomposition ratio (C/F). Note that y‐axis is presented in log‐scale, considering experimental data (Present, black circles) and projections under the global warming scenario (Future CCM3, grey squares). Means ± SE are presented for Holdridge life zones (Holdridge 1967) (see C/F ratios for each site in Figure S7).
Positive Feedback on Climate Warming by Stream Microbial Decomposers Indicated by a Global Space‐For‐Time Substitution Study
  • Article
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April 2025

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Richard G. Pearson

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Decomposition of plant litter is a key ecological process in streams, whose contribution to the global carbon cycle is large relative to their extent on Earth. We examined the mechanisms underlying the temperature sensitivity (TS) of instream decomposition and forecast effects of climate warming on this process. Comparing data from 41 globally distributed sites, we assessed the TS of microbial and total decomposition using litter of nine plant species combined in six mixtures. Microbial decomposition conformed to the metabolic theory of ecology and its TS was consistently higher than that of total decomposition, which was higher than found previously. Litter quality influenced the difference between microbial and total decomposition, with total decomposition of more recalcitrant litter being more sensitive to temperature. Our projections suggest that (i) warming will enhance the microbial contribution to decomposition, increasing CO2 outgassing and intensifying the warming trend, especially in colder regions; and (ii) riparian species composition will have a major influence on this process.

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Encalada 29 | Ricardo Figueroa 30 | Alexander S. Flecker 31 | Tadeusz Fleituch 32 | André Frainer 33,34 | Erica A. García 35 | Gabriela García 11

March 2025

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74 Reads

Global Change Biology

Keywords: carbon cycle | detritivores | global change | globally distributed study | litter quality | metabolic theory of ecology | microorganisms | plant litter decomposition | stream ecosystem functioning | temperature sensitivity ABSTRACT Decomposition of plant litter is a key ecological process in streams, whose contribution to the global carbon cycle is large relative to their extent on Earth. We examined the mechanisms underlying the temperature sensitivity (TS) of instream decomposition and forecast effects of climate warming on this process. Comparing data from 41 globally distributed sites, we assessed the TS of microbial and total decomposition using litter of nine plant species combined in six mixtures. Microbial decomposition conformed to the metabolic theory of ecology and its TS was consistently higher than that of total decomposition, which was higher than found previously. Litter quality influenced the difference between microbial and total decomposition, with total decomposition of more recalcitrant litter being more sensitive to temperature. Our projections suggest that (i) warming will enhance the microbial contribution to decomposition, increasing CO 2 outgassing and intensifying the warming trend, especially in colder regions; and (ii) riparian species composition will have a major influence on this process.


Great Barrier Reef Catchment Area (GBRCA), river basins, Natural Resource Management (NRM) regions, and monitoring site locations captured in this compilation.
Distribution and counts of selected parameters across the GBR catchments aggregated over time. Dissolved nutrients include nitrogen oxides, ammonium and filterable reactive phosphorus as counts for these were extremely similar across the catchments.
Numbers of nutrient water quality samples included in this data compilation per year per river basin. Additional sample collection undertaken by the Queensland Government’s Catchment Loads Monitoring Program within each of these basins has also been provided for historical completeness.
Compilation of riverine water quality data from the Great Barrier Reef catchment area, northeastern Australia

February 2025

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114 Reads

Scientific Data

This manuscript describes the collation of available water quality data from the freshwater reaches of surface streams within the Great Barrier Reef catchment area, northeastern Australia. This compilation represents one of the most comprehensive online datasets for historical tropical and subtropical freshwater quality around the world. We document the criteria for selection of the data and associated publications as well as the processes of data cleaning used to produce a qualitative assessment of the datasets. The final compilation includes 41 individual datasets that collectively report 466 sites and contain over 26,000 discrete water quality sample records totaling more than 350,000 unique water quality results. Finally, we outline the nuances of the data that end users need to take into account when combining them for spatial and temporal analyses. The dataset ensures that these valuable water quality data collected over the past four decades are preserved for the next generations of researchers, practitioners, management agencies and policy makers.


How to make land use policy decisions: Integrating science and economics to deliver connected climate, biodiversity, and food objectives

November 2024

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260 Reads

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3 Citations

Proceedings of the National Academy of Sciences

Land use change is crucial to addressing the existential threats of climate change and biodiversity loss while enhancing food security [M. Zurek et al. , Science 376 , 1416–1421 (2022)]. The interconnected and spatially varying nature of the impacts of land use change means that these challenges must be addressed simultaneously [H.-O. Pörtner et al. , Science 380 , eabl4881 (2023)]. However, governments commonly focus on single issues, incentivizing land use change via “Flat-Rate” subsidies offering constant per hectare payments, uptake of which is determined by the economic circumstances of landowners rather than the integrated environmental outcomes that will be delivered [G. Q. Bull et al. , Forest Policy Econ. 9 , 13–31 (2006)]. Here, we compare Flat-Rate subsidies to two alternatives: “Land Use Scenario” allocation of subsidies through consultation across stakeholders and interested parties; and a “Natural Capital” approach which targets subsidies according to expected ecosystem service response. This comparison is achieved by developing a comprehensive decision support system, integrating new and existing natural, physical, and economic science models to quantify environmental, agricultural, and economic outcomes. Applying this system to the United Kingdom’s net zero commitment to increase carbon storage via afforestation, we show that the three approaches result in significantly different outcomes in terms of where planting occurs, their environmental consequences, and economic costs and benefits. The Flat-Rate approach actually increases net carbon emissions while Land Use Scenario allocation yields poor economic outcomes. The Natural Capital targeted approach outperforms both alternatives, providing the highest possible social values while satisfying net zero commitments.


The species‐level ecosystem service contribution matrix for pollination. ‘Importance’ refers to the importance of a species for pollination provision, and ‘Certainty’ refers to the confidence underlying the evidence for the species' importance. Each cell includes the definitions used to classify each species, and the number of species in our analyses with this classification (in bold). The colour of the cell gives an indication of the contribution of those species to pollination provision: Blue = low contribution, yellow = medium contribution, red = high contribution. We only included species from Orders found across all contribution groups (low, medium, and high). A ‘true pollinating species or animal group’ is defined by Klein et al. (2007) as “species for which at least 80% of their single flower visits result in a fruit, or species that lead to higher fruit and seed quality and quantity when caged or abundant in natural communities in contrast to fruit and seed quality and quantity when flowers are protected from all visitors”. A ‘possible pollinator’ within the Klein et al. (2007) database is a floral visitor. If a species could have fit into two different classifications, we assigned the species the higher risk classification (e.g., if there was evidence confirming pollination at the genus level within Millard et al. (2021), but the species was classed as a “true pollinator” with the impact of animal‐mediated pollination classed as “great” for over half of the crops it pollinated within Klein et al. (2007), the species was assigned with a contribution classification of High Importance, High Certainty). See Table S5 for the list of species names in each contribution group.
The spatial distribution of assemblages within the PREDICTS Project database that included species within (a) low‐, (b) medium‐, and/or (c) high‐contribution groups from the Orders of Apodiformes, Chiroptera, Coleoptera, Didelphimorphia, Diptera, Hymenoptera, Lepidoptera, Passeriformes, or Squamata. Contribution group indicates the contribution of the species towards the provision of crop pollination (see Figure 1).
The difference in species richness in assemblages across different land‐use types and land‐use intensities, relative to that in minimally used primary vegetation. Assemblages have been split into three groups: (a) species in the low‐contribution group; (b) species in the medium‐contribution group; and (c) species in the high‐contribution group. Colours represent land‐use type: Primary vegetation (PV; light green), secondary vegetation (SV; dark green), plantation (purple), cropland (yellow), pasture (orange), and urban (red). Error bars represent ±1 SE. The down arrows for the high‐contribution group in intense use primary and secondary vegetation and plantation represent predictions by the model that there may be no species from the high‐contribution group found in these land uses. Note the difference in y‐axis limits between the plots.
The difference in total abundance of species in assemblages across different land‐use types, land‐use intensities, and with different amounts of surrounding semi‐natural habitat (SNH), relative to assemblages in minimally used primary vegetation surrounded by a high percentage (91.4%) of SNH. Assemblages have been split into three groups: (a) species in the low‐contribution group; (b) species in the medium‐contribution group; and (c) species in the high‐contribution group. Open shapes represent those assemblages with a low percentage of surrounding SNH (37.5%) and filled shapes represent those assemblages with a high percentage of surrounding SNH (91.4%)—we chose to present these values as they were the 33rd and 66th percentile, respectively, across sampled sites. Colours represent land‐use type: Primary vegetation (PV; light green), secondary vegetation (SV; dark green), plantation (purple), cropland (yellow), pasture (orange), and urban (red). Error bars represent ±1 SE; the upper values of the error bars for light and intense use urban sites surrounded by a high percentage of SNH in plot (b) were 721% and 1253%, respectively; the upper values of the error bars for minimal use urban sites surrounded by a high percentage of SNH in plot (c) was 746%.
Important Crop Pollinators Respond Less Negatively to Anthropogenic Land Use Than Other Animals

October 2024

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97 Reads

Animal‐mediated pollination is a key ecosystem service required to some extent by almost three‐quarters of the leading human food crops in global food production. Anthropogenic pressures such as habitat loss and land‐use intensification are causing shifts in ecological community composition, potentially resulting in declines in pollination services and impacting crop production. Previous research has often overlooked interspecific differences in pollination contribution, yet such differences mean that biodiversity declines will not necessarily negatively impact pollination. Here, we use a novel species‐level ecosystem service contribution matrix along with mixed‐effects models to explore how groups of terrestrial species who contribute differently to crop pollination respond globally to land‐use type, land‐use intensity, and availability of natural habitats in the surrounding landscape. We find that the species whose contribution to crop pollination is higher generally respond less negatively (and in some cases positively) to human disturbance of land, compared to species that contribute less or not at all to pollination. This result may be due to these high‐contribution species being less sensitive to anthropogenic land conversions, which has led humans to being more reliant on them for crop pollination. However, it also suggests that there is potential for crop pollination to be resilient in the face of anthropogenic land conversions. With such a high proportion of food crops requiring animal‐mediated pollination to some extent, understanding how anthropogenic landscapes impact ecological communities and the consequences for pollination is critical for ensuring food security.


FIGURE 1 | Geographical distribution of studies by biological group. The study locations represent the central geographical coordinates (average latitude and longitude) of their sites. In cases of missing geographical coordinates, we placed studies at the geographical centre of their respective province/state or country, based on the most detailed information we had.
Number of taxa and records estimated by biological groups.
FreshLanDiv: A Global Database of Freshwater Biodiversity Across Different Land Uses

October 2024

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935 Reads

Global Ecology and Biogeography

Motivation: Freshwater ecosystems have been heavily impacted by land-use changes, but data syntheses on these impacts are still limited. Here, we compiled a global database encompassing 241 studies with species abundance data (from multiplebiological groups and geographic locations) across sites with different land-use categories. This compilation will be useful for addressing questions regarding land-use change and its impact on freshwater biodiversity. Main Types of Variables Contained: The database includes metadata of each study, sites location, sample methods, sample time, land-use category and abundance of each taxon. Spatial Location and Grain: The database contains data from across the globe, with 85% of the sites having well-defined geographical coordinates. Major Taxa and Level of Measurement: The database covers all major freshwater biological groups including algae, macrophytes, zooplankton, macroinvertebrates, fish and amphibians.


Geographical distribution of studies by biological group. The study locations represent the central geographical coordinates (average latitude and longitude) of their sites. In cases of missing geographical coordinates, we placed studies at the geographical centre of their respective province/state or country, based on the most detailed information we had.
Number of studies per biological group (A) and ecosystem type (B).
Cumulative land‐use comparisons recorded in the database. Each number within the grid indicates the count of study occurrences for the comparison of two land‐use categories plotted on the respective axes.
FreshLanDiv: A Global Database of Freshwater Biodiversity Across Different Land Uses

October 2024

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1,825 Reads

Motivation Freshwater ecosystems have been heavily impacted by land‐use changes, but data syntheses on these impacts are still limited. Here, we compiled a global database encompassing 241 studies with species abundance data (from multiple biological groups and geographic locations) across sites with different land‐use categories. This compilation will be useful for addressing questions regarding land‐use change and its impact on freshwater biodiversity. Main Types of Variables Contained The database includes metadata of each study, sites location, sample methods, sample time, land‐use category and abundance of each taxon. Spatial Location and Grain The database contains data from across the globe, with 85% of the sites having well‐defined geographical coordinates. Major Taxa and Level of Measurement The database covers all major freshwater biological groups including algae, macrophytes, zooplankton, macroinvertebrates, fish and amphibians.


Figure 5. Structure of the 2022 Scientific Consensus Statement.
2022 Scientific Consensus Statement: Summary. In: 2022 Scientific Consensus Statement on land-based impacts on Great Barrier Reef water quality and ecosystem condition.

August 2024

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1 Citation

The 2022 Scientific Consensus Statement brings together the latest scientific evidence to understand how land-based activities can influence water quality in the Great Barrier Reef, and how these influences can be managed to improve water quality outcomes for the Great Barrier Reef. This document, the ‘2022 Scientific Consensus Statement Summary’, is structured into three sections. Section 1 introduces the 2022 Scientific Consensus Statement and its main components, highlighting some of the differences between this and previous iterations (for more details see the Process section of the 2022 Scientific Consensus Statement website). Section 2 contains the Overarching Conclusions resulting from the formal consensus process. Section 3 contains the key findings for each Theme. This includes the Summary Statements developed with convergence among all experts within each Theme expert group, a summary of the results of the evidence appraisal for each Question (quantity, diversity, relevance, consistency and confidence) and the supporting Evidence Statements for each question within a Theme, extracted from the syntheses of evidence.


Natural capital approaches for the optimal design of policies for nature recovery

April 2024

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141 Reads

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7 Citations

By embedding a spatially explicit ecosystem services modelling tool within a policy simulator we examine the insights that natural capital analysis can bring to the design of policies for nature recovery. Our study is illustrated through a case example of policies incentivising the establishment of new natural habitat in England. We find that a policy mirroring the current practice of offering payments per hectare of habitat creation fails to break even, delivering less value in improved flows of ecosystem services than public money spent and only 26% of that which is theoretically achievable. Using optimization methods, we discover that progressively more efficient outcomes are delivered by policies that optimally price activities (34%), quantities of environmental change (55%) and ecosystem service value flows (81%). Further, we show that additionally attaining targets for unmonetized ecosystem services (in our case, biodiversity) demands trade-offs in delivery of monetized services. For some policy instruments it is not even possible to achieve the targets. Finally, we establish that extending policy instruments to offer payments for unmonetized services delivers target-achieving and value-maximizing policy designs. Our findings reveal that policy design is of first-order importance in determining the efficiency and efficacy of programmes pursuing nature recovery. This article is part of the theme issue ‘Bringing nature into decision-making’.


Potential for positive biodiversity outcomes under diet-driven land use change in Great Britain

February 2024

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1 Citation

Background A shift toward human diets that include more fruit and vegetables, and less meat is a potential pathway to improve public health and reduce food system-related greenhouse gas emissions. Associated changes in land use could include conversion of grazing land into horticulture, which makes more efficient use of land per unit of dietary energy and frees-up land for other uses. Methods Here we use Great Britain as a case study to estimate potential impacts on biodiversity from converting grazing land to a mixture of horticulture and natural land covers by fitting species distribution models for over 800 species, including pollinating insects and species of conservation priority. Results Across several land use scenarios that consider the current ratio of domestic fruit and vegetable production to imports, our statistical models suggest a potential for gains to biodiversity, including a tendency for more species to gain habitable area than to lose habitable area. Moreover, the models suggest that climate change impacts on biodiversity could be mitigated to a degree by land use changes associated with dietary shifts. Conclusions Our analysis demonstrates that options exist for changing agricultural land uses in a way that can generate win-win-win outcomes for biodiversity, adaptation to climate change and public health.


Citations (70)


... Finally, since 2009 the overall score for water quality on the GBR given in the seven annual report cards (based on eReefs coupled hydrodynamic-biogeochemical model in the most recent report cards; see Supplementary Material Text S3), has fluctuated between 'poor' and 'moderate' (Table S6) [52][53][54][55][56][57][58] . Combined, these measured and modelled results point to slow, if any, progress having been made in achieving GBR water quality improvement, including in the Cairns Sector 26,61 . The lack of meaningful improvement, and in some cases further decline in measured GBR water quality since the implementation of various Reef Plans starting in 2003 58,59 , mean that the efficacy of water quality improvements in reducing COTS population outbreaks and their impacts on hard coral cover are likely to be negligible. ...

Reference:

Relative efficacy of three approaches to mitigate Crown-of-Thorns Starfish outbreaks on Australia's Great Barrier Reef
2022 Scientific Consensus Statement: Summary. In: 2022 Scientific Consensus Statement on land-based impacts on Great Barrier Reef water quality and ecosystem condition.

... In addition to promoting food production, the consolidation potential map can explicitly support the integration of settlement consolidation into multi-objective planning (Strassburg et al., 2020;Bateman et al., 2024). Food security, biodiversity conservation, and climate change mitigation are all integral elements of the Sustainable Development Goals (Salerno et al., 2024). ...

How to make land use policy decisions: Integrating science and economics to deliver connected climate, biodiversity, and food objectives
  • Citing Article
  • November 2024

Proceedings of the National Academy of Sciences

... A dominant theme across the articles is the tension between economic valuation and a more plural understanding of nature's worth for humanity and for the biosphere. The value monism characteristic of economic valuation allows aggregating individual preferences 'to a single metric of social value' (Day et al. 2024, 1) that can be easily considered in decision models. While acknowledging the potential of NCA and economic valuation in highlighting nature's importance, the articles caution against reducing nature to merely a set of monetisable assets. ...

Natural capital approaches for the optimal design of policies for nature recovery

... for example, done by Lenoir et al. 2020). Such analyses could include investigations of global latitudinal trends in biodiversity (Nishizawa et al. 2022), trends for the CMI or MCWD (Zuidema et al. 2022), patterns in hyperdominance (Cooper et al. 2024), or the 'odd man out' pattern of lower tree diversity in Africa (Hagen et al. 2021). As a large fraction of terrestrial plant species are rare (Enquist et al., 2019;Dinerstein et al. 2020), it was interesting to find that 20,732 (43.1%) of tree species occurred in a single botanical country (and thus were found to be endemic to that country), while 39,591 (82.3%) of species occurred in five or fewer such countries. ...

Consistent patterns of common species across tropical tree communities

Nature

... The conservation of rare species has shifted from focusing on the intrinsic value of species to conservation ecosystem services and the benefits provided to people (Groner et al., 2023). The establishment of nature reserves is the most effective means to slow down the rate of species extinction. ...

Limited evidence for quantitative contribution of rare and endangered species to agricultural production

Agriculture Ecosystems & Environment

... Acknowledgements. UK species occurrence records were provided by the Biological Records Centre based on data collated from the recording schemes and societies listed in [71]. The work of the Biological Records Centre is supported by the Natural Environment Research Council award number NE/R016429/1 as part of the UK-SCAPE programme delivering National Capability. ...

Potential for positive biodiversity outcomes under diet-driven land use change in Great Britain
  • Citing Article
  • May 2022

... Conservation management of the wetlands could benefit significantly from an overarching framework for regulation, on-ground management and dissemination of information to secure long-term health, given the national importance of these wetlands (Connolly et al. 2012;Driscoll et al. 2012), as has been advocated for the whole Burdekin system (Pearson et al. 2022). Inclusion of a large proportion of the freshwater wetland complex in an expansion of the Ramsar site to the south would be a welcome development (Kingsford et al. 2021). ...

Enhancing whole-of-river conservation

... The worldwide reduction of the medicinal species population is caused by multiple factors, such as the loss of their natural habitats due to overharvesting, urbanization expansion, and the adverse effects of climate change [85,86]. Climate change influences alterations to species' habitat ranges by leading to niche shifts, expansions, or contractions [87]. ...

Climate change, land cover change, and overharvesting threaten a widely used medicinal plant in South Africa

... Parapatric divergence occurs without a physical barrier between populations and instead is driven by adaptation through natural selection to specific ecological niches along environmental gradients in climate, vegetation, and topography across geography (Huntley 2023). The hypothesis was proposed for Africa due to morphological divergence observed in Little Greenbuls along forest-savanna ecotones (Moritz et al. 2000;Smith et al. 2001;Plana 2004) and supported by studies in plants (Duminil et al. 2010;Heuertz et al. 2014) and vertebrate taxa, including amphibians Hughes et al. 2018), fish (Burress 2015), reptiles (Nunes et al. 2022), and birds and mammals (Fjeldså and Lovett 1997;Smith et al. 1997;Orr and Smith 1998;McCormack and Smith 2008;Kirschel et al. 2011;Lewin et al. 2016). Parapatric speciation involves continuous/ historical gene flow followed by isolation where population boundaries are expected to coincide with ecological gradients (Moritz et al. 2000;Couvreur et al. 2021). ...

Evidence for ecological processes driving speciation among endemic lizards of Madagascar
  • Citing Article
  • November 2021

Evolution

... 6−8 In addition, increasingly warm temperatures in many parts of the world due to climate change will likely drive greater recreational water use, making it necessary to evaluate the impacts on the environment and human health (i.e., for recreational users). While the impact of recreational activities on the microbial and general water quality (e.g., nutrients) has been studied previously, 9 studies of introduced chemical constituents are rare. Ocean beaches have received some study, 10−12 but freshwater environments (e.g., lakes and streams) are understudied. ...

Water-quality and ecosystem impacts of recreation in streams: Monitoring and management
  • Citing Article
  • October 2021

Environmental Challenges