Reşat Apak’s research while affiliated with Istanbul University-Cerrahpaşa and other places

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Publications (350)


The CUPRAC method, its modifications and applications serving green chemistry
  • Chapter

January 2025

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21 Reads

Reşat Apak

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STEM image taken at a magnification of 120000x for MnFe2O4.
STEM image taken at a magnification of 120000x for MnO2 (synthesized by MnSO4 precipitation).
STEM images for MnO2 (synthesized by KMnO4 reduction) taken at a magnification of 80000x (A) and 120000x (B).
Color SEM images of MnFe2O4 (A), MnO2 (MnSO4 precipitation method) (C) and MnO2 (KMnO4 reduction method) (E) and EDXS results of MnFe2O4 (B), MnO2 (MnSO4 precipitation method) (D) and MnO2 (KMnO4 reduction method) (F).
XPS survey spectrum of MnFe2O4 (A), high resolution spectrum of Fe2p (B), Mn2p (C) and O 1s (D).

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DNA Probing of Peroxidase‐Mimetic Activities of Selected Manganese‐Based Nanozymes and Measurement of Antioxidant Activity for DNA Protection
  • Article
  • Publisher preview available

October 2024

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14 Reads

Three different Mn‐based peroxidase‐mimetic nanoparticles (NPs) were synthesized as nanozymes: (i) manganese (II)‐ferrite (MnFe2O4) fabricated by co‐precipitating MnCl2.4H2O and FeCl3.6H2O; (ii) MnO2 synthesized from precipitation of MnSO4 in basic medium; (iii) manganese oxide obtained by reducing KMnO4 with tris(2‐hydroxyethyl) amine, all characterized using STEM, EDXS, FTIR and XPS techniques. These NPs acted as peroxidases, revealed by using a DNA probe, on which the damage generated by peroxidase mimetic NPs was monitored spectrophotometrically by CUPRAC and 3,3′,5,5′‐tetramethylbenzidine (TMB) methods. Results were confirmed by RP‐HPLC and voltammetry, the latter involving an AuNPs‐modified glassy carbon electrode (GCE), multi‐walled carbon nanotubes (MWCNT) and Nafion combination. Colorimetric assay with CUPRAC rather than TMB better agreed with chromatographic/voltammetric findings in detecting both peroxidase activity and DNA hazard. Mn(III)‐containing manganese oxide from permanganate reduction had stronger peroxidase activity. The proposed method demonstrated protective effects of antioxidants (morin, catechin and quercetin) against oxidative DNA damage for the first time.

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Microwave-assisted extraction of valuable phenolics from sunflower pomace with natural deep eutectic solvents and food applications of the extracts

July 2024

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204 Reads

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1 Citation

A green process, both in terms of solvent (natural deep eutectic solvents, NADES) and extraction method (microwave-assisted extraction, MAE) for the recovery of bioactive components from sunflower pomace (SFP, a by-product of oil extraction process), was designed to contribute to their sustainable valorization. For the extraction of valuable phenolics from sunflower pomace, nine potential NADES were prepared. Among them, choline chloride-urea-water (CC-U-W) at a molar ratio of 1:2:4 was selected for extraction, showing better yield and physicochemical properties. Operational parameters (extraction temperature, time, water ratio, and solvent-to-solid ratio) for MAE were optimized and modeled utilizing response surface methodology. Under optimal conditions, the antioxidant properties of SFP extract were evaluated by CUPRAC, ABTS, and DPPH methods. The total phenolic contents of extracts were evaluated by the Folin–Ciocalteu method. Phenolics were characterized by using the HPLC–PDA system. The results showed that SFP NADES extract had potential antioxidant activity which was higher than that of traditional solvents. In order to better evaluate SFP extract as a valuable food ingredient, SFP extracts at a ratio of 5, 10, and 20% added smoothie-like beverages with strawberries and yogurt were prepared. Fortification of beverages with NADES extract enhanced antioxidant efficiency, increasing total antioxidant capacity in a range of 12.4 to 68.6% and free radical scavenging capacity between 0.4 to 67.9% during both the initial and the in vitro gastrointestinal digestion stages. The addition of SFP NADES extract to food samples made a positive contribution in terms of the antioxidant activity of the final product. The results of this study revealed that sunflower by-products can be evaluated as a potential antioxidant source which is easily accessible, and the proposed extraction process has an important potential to recover bioactive compounds with high efficiency.


Optimization curves of A amount of enzyme immobilized POx on 15 mg SiO2@Fe3O4 and B amount of Fe3O4 using 0.6 mg POx in the presence of 15 mg LOx(0.3 mg)-SiO2@Fe3O4 NPs and following optimization curves of C enzymatic reaction time, D colorimetric reaction time, E pH, and F temperature using mixture of 15 mg LOx(0.3 mg)-SiO2@Fe3O4 NPs and POx(0.6 mg)-SiO2@Fe3O4 NPs
A Spectra and photographs recorded for lactate biosensor with increasing lactate concentration using monoenzyme-immobilized nanoparticles (LOx-SiO2@Fe3O4). B The curve of absorbance recorded at 450 nm versus lactate concentration and linear calibration plot
A Spectra and photographs recorded for lactate biosensor with increasing lactate concentration using bienzyme-immobilized nanoparticles (LOx-SiO2@Fe3O4 + POx-SiO2@Fe3O4). B The curve of absorbance recorded at 450 nm versus lactate concentration and linear calibration plot
Schematic representation of lactate biosensor based on using bienzyme-immobilized magnetite nanoparticles (LOx-SiO2@Fe3O4 + POx-SiO2@Fe3O4)
Absorbance-time bar diagram (A) and percentage change-time graph (B) for two distinct concentrations of lactate with the use of lactate biosensor using LOx-SiO2@Fe3O4 + POx-SiO2@Fe3O4 nanoparticles
A new colorimetric lactate biosensor based on CUPRAC reagent using binary enzyme (lactate-pyruvate oxidases)-immobilized silanized magnetite nanoparticles

July 2024

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25 Reads

Microchimica Acta

A novel optical lactate biosensor is presented that utilizes a colorimetric interaction between H2O2 liberated by a binary enzymatic reaction and bis(neocuproine)copper(II) complex ([Cu(Nc)2]²⁺) known as CUPRAC (cupric reducing antioxidant capacity) reagent. In the first step, lactate oxidase (LOx) and pyruvate oxidase (POx) were separately immobilized on silanized magnetite nanoparticles (SiO2@Fe3O4 NPs), and thus, 2 mol of H2O2 was released per 1 mol of the substrate due to a sequential enzymatic reaction of the mixture of LOx-SiO2@Fe3O4 and POx-SiO2@Fe3O4 NPs with lactate and pyruvate, respectively. In the second step, the absorbance at 450 nm of the yellow-orange [Cu(Nc)2]⁺ complex formed through the color reaction of enzymatically produced H2O2 with [Cu(Nc)2]²⁺ was recorded. The results indicate that the developed colorimetric binary enzymatic biosensor exhibits a broad linear range of response between 0.5 and 50.0 µM for lactate under optimal conditions with a detection limit of 0.17 µM. The fabricated biosensor did not respond to other saccharides, while the positive interferences of certain reducing compounds such as dopamine, ascorbic acid, and uric acid were minimized through their oxidative removal with a pre-oxidant (NaBiO3) before enzymatic and colorimetric reactions. The fabricated optical biosensor was applied to various samples such as artificial blood, artificial/real sweat, and cow milk. The high recovery values (close to 100%) achieved for lactate-spiked samples indicate an acceptable accuracy of this colorimetric biosensor in the determination of lactate in real samples. Due to the increase in H2O2 production with the bienzymatic lactate sensor, the proposed method displays double-fold sensitivity relative to monoenzymatic biosensors and involves a neat color reaction with cupric-neocuproine having a clear stoichiometry as opposed to the rather indefinite stoichiometry of analogous redox dye methods. Graphical Abstract





Citations (71)


... Some methods were based on nanocomposites of carbon nanotubes with other materials [80,97,107]. A GC working electrode was modified with MWCNT and TiO 2 nanoparticles, using Nafion as a binder [80]. ...

Reference:

Electrochemical Sensors and Biosensors for the Determination of Food Nutritional and Bioactive Compounds: Recent Advances
Amperometric sensor for total antioxidant capacity measurement using Cu (II)-neocuproine/carrageenan-MWCNT/GCE
  • Citing Article
  • February 2024

Microchemical Journal

... Then, 0.1 mL samples of the fungal extracts were added at various strengths to 1.9 mL of the ABTS working solution; these were mixed via vortex shaking and allowed to react for 6 min at room temperature in a light-proof tin box. The absorbance was measured at 734 nm [55,56,58]. The formula used to calculate ABTS+ free radical scavenging ability is as follows: ...

Colorimetric Sensing of Antioxidant Capacity via Auric Acid Reduction Coupled to ABTS Oxidation

ACS Omega

... These properties are related to one or more constituents in vegetable oils' composition. The principal physicochemical properties employed to rate oil quality are their smoke point, acid value, oxidative stability index, peroxide value, saponification value, unsaponifiable substances, para-anisidine value, and iodine value (Paul et al., 1997;Zahir et al., 2017;Bekdeser et al., 2024). ...

Determination of Primary and Secondary Oxidation Products in Vegetable Oils with Gold Nanoparticle Based Fluorometric Turn-on Nanosensor: A New Total Oxidation Value
  • Citing Article
  • September 2023

Food Chemistry

... This feature has been exploited to design probes for their detection. The development of various fluorescence-based detectors, such as organic models 31, 32 , metal-organic frameworks (MOFs) [33][34][35][36][37] , polymers 38,39 , covalent organic frameworks (COFs) 40,41 , nanomaterials [42][43][44] , and quantum dots [45][46][47] , has proven effective for detecting NACs. Additionally, the advancement of discrete metal-organic cages has enabled the detection of NACs in both solid and liquid states. ...

Heteroatom-Doped Carbon Quantum Dots and Polymer Composite as Dual-Mode Nanoprobe for Fluorometric and Colorimetric Determination of Picric Acid
  • Citing Article
  • August 2023

ACS Applied Materials & Interfaces

... In the present scenario, environmental and human safety is one of the major concerns for the present world [1]. Nitro group containing aromatic compounds such as para-nitrophenol and 2,4,6-trinitrophenol (2,4,6-TNP) possess toxic natures [2]. In particular, 2,4,6-TNP is a well-known aromatic explosive and has been widely used in land mine detection, forensic research, and so on [3]. ...

A novel electrochemical sensor based on phosphate-stabilized poly-caffeic acid film in combination with graphene nanosheets for sensitive determination of nitro-aromatic energetic materials
  • Citing Article
  • August 2023

Talanta

... In our recent studies, the colorimetric CUPRAC reaction and enzymatic reactions based on various types of enzymes were integrated for the first time, and highly sensitive and selective colorimetric biosensors based on this system have been developed. For example, glucose, uricase, and xanthine biosensors based on oxidases [33,34], glucose biosensors based on glucose dehydrogenase [35], and enzymatic organophosphate pesticide biosensors based on the inhibition activity of pesticide toward acetylcholine esterase [36] have been reported. However, our literature search shows that no such study has been carried out with lactate oxidase (LOx) and pyruvate oxidase (POx) enzymes for the fabrication of lactate biosensors. ...

A novel acetylcholinesterase inhibition based colorimetric biosensor for the detection of paraoxon ethyl using CUPRAC reagent as chromogenic oxidant
  • Citing Article
  • July 2023

Talanta

... However, this can lead to a decrease in fuorescence intensity. Tis process is identifed as dynamic quenching or collision quenching [116,117]. ...

Sensitive Fluorometric Determination of Picric Acid and Antioxidant Stabilizers in Propellant Compositions Using Amine-Rich Nitrogen-Doped Carbon Quantum Dots
  • Citing Article
  • July 2023

Talanta Open

... The antioxidative effects of glutathione and ascorbic acid were also detected. GCE covered with Au nanoparticles, MWNTs, Nafion, and dsDNA was used for the investigation of Cu (II)-induced oxidative damage in the presence of dissolved oxygen [44]. A wide range of natural and synthetic antioxidants and herbal tea extracts were examined in order to evaluate the influence on guanine, adenine, and cytosine signals. ...

Voltammetric Measurement of Antioxidant Activity by Prevention of Cu(II)-Induced Oxidative Damage on DNA Bases Using a Modified Electrode

ACS Omega

... In 2022, the modification of GCE with polycarbazole (PCz) films decorated with gold NPs (AuNPs) to develop selective MIP-based sensors for the determination of TATP and HMTD was conducted by the group of Prof. Res -at Apak. 81 These peroxide explosive memory films were formed in the surface of the working electrode by electropolymerisation using CV. Finally, two different sensors were made TATP-memory-GCE/PCz/AuNPs and HMTD-memory-GCE/PCz/AuNPs, which were used for TATP and HMTD detection, respectively. ...

Direct Determination of Peroxide Explosives on Polycarbazole/Gold Nanoparticle-Modified Glassy Carbon Sensor Electrodes Imprinted for Molecular Recognition of TATP and HMTD

Analytical Chemistry

... In soil-related studies (moisture, texture, temperature, and roughness), research is initially carried out in a laboratory by taking field samples. In the next stage, based on the initial work, laboratory instruments are modified according to the field conditions to collect real-time data [3][4][5]. However, for large-scale studies, laboratory tests are limited to the varying soil conditions from region to region, and the results obtained cannot apply to other field conditions. ...

Spectrophotometric Fluoride Determination Using St. John’s Wort Extract as a Green Chromogenic Complexant for Al(III)
  • Citing Article
  • November 2022

ACS Omega