Rachel Seary’s research while affiliated with University of California, Santa Cruz and other places

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Publications (9)


Figure 2. Themes covered by the Ocean Decade-endorsed Programmes as determined by frequency (% usage) of categorical word use for (top) all Programmes and (bottom) each Programme derived from content analysis of the Programme fact sheets.
Advancing the climate-biodiversity-fisheries nexus in the UN Decade of Ocean Science for Sustainable Development
  • Article
  • Full-text available

August 2024

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92 Reads

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1 Citation

ICES Journal of Marine Science

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Laura C Anderson

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Climate-driven changes in marine ecosystem structure and function adversely impact the biodiversity and sustainability of living marine resources, food security, and the resilience of coastal communities. Understanding how climate change impacts marine ecosystem biodiversity and global fisheries, i.e. the “climate-biodiversity-fisheries nexus”, is a fundamental element of the UN Decade of Ocean Science for Sustainable Development. Several Ocean Decade-endorsed Programmes within the climate-biodiversity-fisheries nexus are building global networks to transform our capacity to understand, forecast, manage, and adapt to climate-driven changes in ocean ecosystems, including sustaining blue food resources that provide essential food security and nutrition in a rapidly changing world. We compare the scope, objectives, global partnerships, and capacities of these Programmes, facilitating effective collaboration and identifying critical gaps in developing solutions to climate-driven changes in marine food webs, species assemblages, and global fisheries. This work complements the Ocean Decade Vision 2030 process by providing an assessment of actions that are underway and guidance to establish new actions needed to monitor and understand marine biodiversity and manage global fisheries within a changing climate. We provide recommendations for new and existing Ocean Decade Actions around the climate-biodiversity-fisheries nexus to help achieve the Ocean Decade outcomes of a “productive, predicted, healthy, and resilient ocean” by 2030.

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Conceptual outline of the study highlighting forecast fields and case studies
A Global SST forecasts and (B) downscaled SST forecasts were used in (C) four configurations for two management tools to test how the spatial resolution and ensemble size affect forecast skill. The two management tools are the (D) Habitat Compression Index (HCI), and (E) Temperature Observations to Avoid Loggerheads (TOTAL). Maps of SST forecasts represent ensemble member 2 of the CanCM4 models at lead time 0.5 for 2010-01-01. Black box on SST maps represents the spatial domain of the TOTAL tool, and the white dashed line the loggerhead turtle closure. Blue and green lines represent the domain (75 km and 150 km from shore, respectively) of the HCI tool. For the case studies, the red line on HCI indicates the long-term mean with values below this considered as high habitat compression; and the red line on TOTAL indicates the threshold to enact a potential closure. Source data are provided as a Source Data file.
Skilful forecasts of the Habitat Compression Index
Observed and forecast Habitat Compression Index using global sea surface temperature forecasts, and its associated skill assessment. A Time-series of observed (black) and forecast Habitat Compression Index (HCI) at three example lead times (0.5, 6.5, 11.5 months corresponding to red, green, and blue colors) with gray shading indicating high compression during a marine heatwave (Mar-2014 to Dec-2016). Horizontal lines indicate the long-term mean of HCI, with high compression as any values below the long-term mean, with colors matching their corresponding forecast lead time. Forecast HCI is the ensemble mean of 73 global forecast models. B–D Skill assessment of forecast HCI for each target month and each lead time, showing the correlation coefficient, forecast accuracy, and SEDI (Symmetric Extremal Dependence Index) calculated across all years (1981–2020). For correlation values, black dots indicate forecast skill is significantly greater than zero (95% confidence). Accuracy values > 0.5 and SEDI values > 0 indicate the forecast is better than random chance, with black dots indicating skill is significantly greater than random forecasts (95% confidence). Gray SEDI squares are months when there are no false positives and SEDI can’t be computed. Source data are provided as a Source Data file.
Skilful forecasts of the sea turtle bycatch closures using TOTAL (Temperature Observations to Avoid Loggerheads)
A Time-series of observed (black) and forecast (color) sea surface temperature anomalies (SSTA) averaged by 6-months at three example lead times (6.5, 8.5, 11.5 months corresponding to red, green, and blue colors). Gray shading indicates a marine heatwave from Mar-2014 to Dec-2016. Straight lines indicate the 74% lead-time specific quantile threshold to enact a closure in either June, July, or August, with colors matching their corresponding forecast lead time. Forecast SSTA is the ensemble mean of 73 global forecast models. B–D Skill assessment of forecast TOTAL for each closure month and each lead time, showing the correlation coefficient, forecast accuracy, and SEDI (Symmetric Extremal Dependence Index) calculated across all years (1981–2020). For correlation values, black dots indicate forecast skill is significantly greater than zero (95% confidence). Accuracy values > 0.62, and SEDI values > 0 indicate the forecast is better than random chance. Source data are provided as a Source Data file.
Improved skill from increasing number of ensemble members
Skill assessment comparison among three forecast configurations (Downscaled Ensemble with 3 ensemble members, Global Full Ensemble with 73 ensemble members, and Global Reduced Ensemble with 3 ensemble members) for the Habitat Compression Index (HCI) tool. Skill assessments include correlation coefficients, forecast accuracy, and SEDI. Values are for each month and lead time from 1981 to 2010 for the HCI tool (n = 24 forecasts). We only show global forecasts that were initialized in January and July to facilitate comparisons with the downscaled forecasts. Values for Temperature Observations To Avoid Loggerheads (TOTAL) are not shown as too few forecasts were available for boxplot comparison (n = 3), but see Fig. S2. Boxplots show the median as a solid black line, the lower and upper hinges are the first and third quartiles, whiskers extend from the smallest/largest value no further than the 1.5*interquartile range, with outliers (black circles) beyond the edge of whiskers plotted individually. Source data are provided as a Source Data file.
Considerations to support practitioners deciding whether to invest in regional downscaling for marine ecological forecasts
For global and downscaled forecasts, colors indicate a dichotomy of superior (green) compared to inferior (red).
Ecological forecasts for marine resource management during climate extremes

December 2023

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153 Reads

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12 Citations

Forecasting weather has become commonplace, but as society faces novel and uncertain environmental conditions there is a critical need to forecast ecology. Forewarning of ecosystem conditions during climate extremes can support proactive decision-making, yet applications of ecological forecasts are still limited. We showcase the capacity for existing marine management tools to transition to a forecasting configuration and provide skilful ecological forecasts up to 12 months in advance. The management tools use ocean temperature anomalies to help mitigate whale entanglements and sea turtle bycatch, and we show that forecasts can forewarn of human-wildlife interactions caused by unprecedented climate extremes. We further show that regionally downscaled forecasts are not a necessity for ecological forecasting and can be less skilful than global forecasts if they have fewer ensemble members. Our results highlight capacity for ecological forecasts to be explored for regions without the infrastructure or capacity to regionally downscale, ultimately helping to improve marine resource management and climate adaptation globally.


Local ecological knowledge and perception of the causes, impacts and effects of Sargassum massive influxes: a binational approach

September 2023

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126 Reads

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6 Citations

Coastal communities of the Caribbean Sea and Gulf of Mexico have been affected by atypical influxes of pelagic macroalgae (Sargassum genus) since 2011, entailing ecological, economic and social impacts in need of characterization. We compiled and documented local ecological knowledge (LEK) and perceptions across diverse stakeholder groups from coastal communities in Mexico (Quintana Roo) (n=50 participants) and the United States (Florida) (n=36 participants) through on-site and online interviews and workshops undertaken from January to March of 2022, to understand how the knowledge of this phenomenon varies among communities and to characterize ecological and well-being impacts. Participants in Quintana Roo associated these influxes with both global phenomena (e.g., climate change) and local scale processes (e.g., currents/wind patterns) while Florida participants associated these events more with the latter. The communities in both regions perceived that the economy and the environment were the most impacted well-being categories. While influxes effects were mostly negative (80%) according to Quintana Roo participants (e.g., affected fisheries), Florida participants considered many positive effects of Sargassum (40%) on several well-being and ecological components (e.g., nursery habitat for marine species). In general, the perception of Sargassum as a problem was less pronounced in Florida, and these differences in perception are related to the magnitude of these influxes’ effect on the daily life of these communities. Overall, macroalgae management is still mainly focused on beach cleanup. Documenting LEK is important to delineate scientific research priorities and to provide decision makers with resources to develop efficient public policies and coastal management decisions.


An anchovy ecosystem indicator of marine predator foraging and reproduction

February 2023

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370 Reads

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13 Citations

Forage fishes are key energy conduits that transfer primary and secondary productivity to higher trophic levels. As novel environmental conditions caused by climate change alter ecosystems and predator-prey dynamics, there is a critical need to understand how forage fish control bottom-up forcing of food web dynamics. In the northeast Pacific, northern anchovy (Engraulis mordax) is an important forage species with high interannual variability in population size that subsequently impacts the foraging and reproductive ecology of marine predators. Anchovy habitat suitability from a species distribution model (SDM) was assessed as an indicator of the diet, distribution and reproduction of four predator species. Across 22 years (1998-2019), this anchovy ecosystem indicator (AEI) was significantly positively correlated with diet composition of all species and the distribution of common murres (Uria aalge), Brandt's cormorants (Phalacrocorax penicillatus) and California sea lions (Zalophus californianus), but not rhinoceros auklets (Cerorhinca monocerata). The capacity for the AEI to explain variability in predator reproduction varied by species but was strongest with cormorants and sea lions. The AEI demonstrates the utility of forage SDMs in creating ecosystem indicators to guide ecosystem-based management.


Timeline showing (a) total monthly ex-vessel revenues from Commercial Dungeness crab fishing in the Northern and Central Management areas of California and (b) the number of whale entanglements recorded in California (bars represent the number of reported entanglements of all whale species in each year) and the timeline of biological and management events influencing the fishery. Data points representing less than 3 participants have been removed for confidentiality. This figure was created in R Studio (Version 4.0.3)⁶⁴. Images were obtained from PhyloPic (http://phylopic.org/), created by Chris Huh (Humpback whale) and Harold N Eyster (Dungeness crab), and are both available for reuse under the Creative Commons Attribution 3.0 Unported license (https://creativecommons.org/licenses/by/3.0/).
(a) Location of the California Commercial Dungeness crab fishery management areas in the California Current Ecosystem and its location with the USA and estimates of pre-season abundance of legal sized male Dungeness crab by season for (b) Northern and (c) Central California using a hierarchical depletion estimator model from Richerson et al. (2020)⁶². This figure, including the map in 2a, was created in R Studio (Version 4.0.3)⁶⁴. The basemap and 200 m isobath were obtained from the rnaturalearth package (Made with Natural Earth. Free vector and raster map data @ naturalearthdata.com).
Observed and retrospectively predicted revenues at the fishery level for the Commercial Dungeness crab fishery in California, within the Northern and Central Management Areas. This figure was created in R Studio (Version 4.0.3)⁶⁴. Points show out-of-sample predictions of Dungeness crab revenue and demonstrate possible model prediction error of predictions made for the 2019 and 2020 fishing seasons.
Density plots of estimated percentage ex-vessel revenue loss as a proportion of a vessels mean annual revenue (2011–2018) by small and large vessels in the Northern and Central Management Areas for the 2019 and 2020 fishing seasons. Median revenue losses are shown with dashed lines. Predicted revenues from within the 25th to 75th percentile are included. Negative numbers on the X axis indicate no revenue loss. The X axis has been restricted to between – 100 and 100 for plotting purposes.
Revenue loss due to whale entanglement mitigation and fishery closures

December 2022

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158 Reads

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10 Citations

Whale entanglements with fishing gear, exacerbated by changing environmental conditions, pose significant risk to whale populations. Management tools used to reduce entanglement risk, for example temporary area restrictions on fishing, can have negative economic consequences for fishing communities. Balancing whale protection with sustaining productive fisheries is therefore a challenge experienced worldwide. In the California Current Ecosystem, ecosystem indicators have been used to understand the environmental dynamics that lead to increased whale entanglement risk in a lucrative crab fishery. However, an assessment of socioeconomic risk for this fishery, as in many other regions, is missing. We estimate retrospectively the losses from ex-vessel revenue experienced by commercial Dungeness crab fishers in California during two seasons subject to whale entanglement mitigation measures using a Linear-Cragg hurdle modeling approach which incorporated estimates of pre-season crab abundance. In the 2020 fishing season, our results suggest total revenues would have been 14.4millionhigherintheCentralManagementAreaofCaliforniaintheabsenceofclosuresandotherdisturbances.Inthe2019fishingseason,ourresultssuggestexvesselrevenueswouldhavebeen14.4 million higher in the Central Management Area of California in the absence of closures and other disturbances. In the 2019 fishing season, our results suggest ex-vessel revenues would have been 9.4 million higher in the Central Management Area and $0.3 million higher in the Northern Management Area. Our evaluation should motivate the development of strategies which maximize whale protection whilst promoting productive, sustainable and economically-viable fisheries.


Recommendations for quantifying and reducing uncertainty in climate projections of species distributions

August 2022

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336 Reads

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41 Citations

Global Change Biology

Projecting the future distributions of commercially and ecologically important species has become a critical approach for ecosystem managers to strategically anticipate change, but large uncertainties in projections limit climate adaptation planning. Although distribution projections are primarily used to understand the scope of potential change ‐ rather than accurately predict specific outcomes ‐ it is nonetheless essential to understand where and why projections can give implausible results and to identify which processes contribute to uncertainty. Here, we use a series of simulated species distributions, an ensemble of 252 species distribution models, and an ensemble of three regional ocean climate projections, to isolate the influences of uncertainty from earth system model spread and from ecological modeling. The simulations encompass marine species with different functional traits and ecological preferences to more broadly address resource manager and fishery stakeholder needs, and provide a simulated true‐state with which to evaluate projections. We present our results relative to the degree of environmental extrapolation from historical conditions, which helps facilitate interpretation by ecological modelers working in diverse systems. We found uncertainty associated with species distribution models can exceed uncertainty generated from diverging earth system models (up to 70% of total uncertainty by 2100), and that this result was consistent across species traits. Species distribution model uncertainty increased through time and was primarily related to the degree to which models extrapolated into novel environmental conditions but moderated by how well models captured the underlying dynamics driving species distributions. The predictive power of simulated species distribution models remained relatively high in the first 30 years of projections, in alignment with the time period in which stakeholders make strategic decisions based on climate information. By understanding sources of uncertainty, and how they change at different forecast horizons, we provide recommendations for projecting species distribution models under global climate change.


Observed, predicted and loss estimate values (million $) for revenues from the Commercial Dungeness crab shery in California. N represents the number of vessels included in the analysis.
Revenue loss due to whale entanglement mitigation and fishery closures

March 2022

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126 Reads

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1 Citation

Whale entanglements with fishing gear, exacerbated by changing environmental conditions, pose significant risk to whale populations. Management tools used to reduce entanglement risk, for example temporary area restrictions on fishing, can have negative economic consequences for fishing communities. Balancing whale protection with sustaining productive fisheries is therefore a challenge experienced worldwide. In the California Current Ecosystem, ecosystem indicators have been used to understand the environmental dynamics that lead to increased whale entanglement risk in a lucrative crab fishery. However, an assessment of socio-economic risk for this fishery, as in many other regions, is missing. We estimate retrospectively the losses from ex-vessel revenue experienced by commercial Dungeness crab fishers in California during two seasons subject to whale entanglement mitigation measures. In the 2020 fishing season, our results suggest total revenues would have been 14.4millionhigherintheCentralManagementAreaofCaliforniaintheabsenceofclosuresandotherdisturbances.Inthe2019fishingseason,ourresultssuggestexvesselrevenueswouldhavebeen14.4 million higher in the Central Management Area of California in the absence of closures and other disturbances. In the 2019 fishing season, our results suggest ex-vessel revenues would have been 9.4 million higher in the Central Management Area and $0.3 million higher in the Northern Management Area. Our evaluation should motivate the development of strategies which maximize whale protection whilst promoting productive, sustainable and economically-viable fisheries.


Defining mangrove-fisheries: A typology from the Perancak Estuary, Bali, Indonesia

April 2021

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142 Reads

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12 Citations

This study develops a definition of what mangrove-fisheries can encompass, incorporating a broad range of their possible characteristics. A detailed case study was conducted to develop a typology of mangrove-fishing in the Perancak Estuary, Bali, Indonesia, using interview surveys to investigate the fishing activities associated with mangroves. This case study demonstrated the complexity that a mangrove-fishery can entail, where fishing is connected to the mangrove forest by fishers of multiple sectors, functions, locations and temporal scales. Through a comparison with other mangrove-fishing communities in Bali, it also highlighted that mangrove-fisheries are variable even when in close proximity. With particular reference to this case study, a framework was developed as a flexible tool for identifying the multiple dimensions of a mangrove-fishery in a local context. Following this framework should encourage researchers and managers to look outside of the groups of fishers traditionally expected to benefit from mangrove fishing. This will enable the development of a broader definition of mangrove-fisheries in a site specific way. Identifying the full scope of fishers that contribute to or benefit from a mangrove-fishery is the first step towards building management measures that reflect the interests of groups of fishers that may otherwise remain under-represented. This is in line with international efforts for sustainability, especially in promoting small-scale fishers’ access to sustainable resources under the UN Sustainable Development Goals.


Measuring mangrove-fishery benefits in the Peam Krasaop Fishing Community, Cambodia

July 2020

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210 Reads

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24 Citations

Estuarine Coastal and Shelf Science

Whilst previous studies have applied economic value to the ecosystem services mangroves provide to fisheries, most quantitative studies in the peer reviewed literature have limited their measurements to the value provided through a single fishing sector, gear or particular target species group. It can be argued that present research into mangrove-fisheries has not yet represented the full complexity that mangrove-fisheries can encompass in terms of the wide range of people and activities that benefit from the mangrove ecosystem. The reported values of mangroves to fishing livelihoods are therefore likely to fall short of a full valuation. The study provides an all-encompassing value of mangrove benefits to fishing, purposefully investigating the value gained from mangroves through all fishing sectors, fishing activities and target species existing in the Peam Krasaop Fishing Community (PKFC), Koh Kong Province, southwest Cambodia. The ecosystem service value of mangroves for fishing to households in the PKFC was calculated using daily landings volumes collected through semi-structured interviews with fishers, scaled to approximated annual catches. Catch figures were converted to economic value, based on the local market prices given by respondents. Results suggested that the PKFC derives approximately 90% of fishing catch, and 85% of gross income, from mangrove-associated species. Fishing activities are diverse within households; they conduct between 1 and 8 different seasonal fishing activities, spread across mangrove gathering, fishing by boat and mariculture. This study provides a higher estimated proportion of mangrove-associated catches than many studies of fishing communities elsewhere. It may be the case that the PKFC does not have higher levels of mangrove dependency than other mangrove-fisheries. Rather, this study may provide a better quantification of mangrove value than has previously been achieved. Further studies along the same lines, taking a similarly holistic approach to mangrove-fishery valuation, are necessary to test this proposition.

Citations (8)


... Although dynamical downscaling offers the possibility of running multiple ensemble members to provide information about forecast uncertainty, the substantial computational cost of highresolution models used for downscaling has constrained the ensemble sizes of past climate downscaling efforts (Drenkard et al., 2021). In an analysis of seasonal forecasts for the California Current System, Brodie et al. (2023) found that although a small ensemble of downscaled forecasts outperformed a subset of the same size from a much larger ensemble of coarse-resolution forecasts, the full ensemble of coarse-resolution forecasts outperformed the small downscaled ensemble. Furthermore, in some cases, high ocean resolution has been found to actually degrade forecast skill (Sandery and Sakov, 2017;Thoppil et al., 2021). ...

Reference:

Dynamically downscaled seasonal ocean forecasts for North American east coast ecosystems
Ecological forecasts for marine resource management during climate extremes

... This qualitative process analyses vulnerability by breaking it down into its components, which can later be addressed (Yates et al., 2010). The strength of this approach lies in the power of the community members to define their vulnerabilities and identify those who are most susceptible (Rosellón-Druker et al., 2023). This leads to the development of solutions and actions that are adapted to the community context and guided by the needs of community members, including the poor and vulnerable (ActionAid International, 2008;Gibeaut et al., 2023). ...

Local ecological knowledge and perception of the causes, impacts and effects of Sargassum massive influxes: a binational approach

... External forcing of SDMs allows us to link research using other models and data (e.g., Fennie et al. 2023;Quezada et al. 2023) to Atlantis in order to better parameterize and investigate the consequences of the effects of climate-driven redistribution of species on the spatial reshuffling of ecological interactions (i.e., overlap between prey and predators). By using this novel, hybrid approach to defining functional groups' spatial distributions, we take advantage of the more granular and externally validated estimates of future distributions from published sources to better understand the food web implications of shifts in functional group overlap. ...

An anchovy ecosystem indicator of marine predator foraging and reproduction

... However, these coarse estimates are likely underestimates of true values due to a lack of information for many fisheries. Bycatch also can have a detrimental impact on fishing industries and fishermen owing to economic losses by damaged gear, down-time for repairs, loss of bait, and diminished catches of target species (Basran & Rasmussen, 2021;Davis et al., 2021;Seary et al., 2022). ...

Revenue loss due to whale entanglement mitigation and fishery closures

... The availability of anchovy biomass estimates over multiple decades will allow examination of these relationships across a much broader range of ocean conditions, and predator/prey population sizes. Recent improvements in regional climate models and ecosystem models are now supporting development of future projections of both species distributions and trophic relationships (Brodie et al. 2022 ). Multidecadal hindcasts of species biomass, such as those developed in this study, could characterize spatiotemporal relationships between ocean conditions, prey, and predators across longer historical timescales, potentially leading to more robust future projections. ...

Recommendations for quantifying and reducing uncertainty in climate projections of species distributions

Global Change Biology

... A prolonged marine heatwave event and associated harmful algal bloom between 2014 and 2016 drove a sharp spike in whale entanglements in shing gear 10,30,31 . RAMP has been criticized by social scientists 16 and industry stakeholders 38 for focusing primarily on the ecological dimension (i.e., risk to whales) while overlooking impacts to shermen -which are felt across a range of social, economic, and cultural scales 18, 25,28,39,40 . Researchers have called for more holistic perspectives on whale entanglement that re ect the complex human dimensions of the issue, yet these integrated approaches are precluded by an absence of social science research that engages the shermen 15,16,18 . ...

Revenue loss due to whale entanglement mitigation and fishery closures

... One of the couplets (Sites 1-2 in Budeng) was selected to include a site currently under aquaculture operations. The area near Budeng includes around 125 ha of mangrove sites on abandoned aquaculture ponds, 35 ha of which has been restored and is still under management [52,53]. All transects were labelled as originating from either an unmanaged or managed site, irrespective of whether there was within-site variation in management. ...

Defining mangrove-fisheries: A typology from the Perancak Estuary, Bali, Indonesia

... Therefore, this assessment can become the basis and input in determining policies to address damage to coastal and marine ecosystems that have occurred in Bintan Regency. Although several studies related to the economic assessment of mangroves using an ecosystem services approach have been carried out in several countries, this research is still limited to several components of ecosystem services, such as providing services for fisheries resources (Seary et al. 2021), utilization of certain types of mangrove wood (Scales and Friess 2019), and the economic value of mangrove ecosystem regulatory services as a carbon sink (Murdiyarso et al. 2021). There are still several gaps in conducting economic assessments of the four mangrove ecosystem services in Indonesia to support government policies in improving the local and regional economies of coastal communities that depend on the existence of mangrove ecosystems. ...

Measuring mangrove-fishery benefits in the Peam Krasaop Fishing Community, Cambodia
  • Citing Article
  • July 2020

Estuarine Coastal and Shelf Science