Poliana Aparecida Rodrigues Gazolla’s research while affiliated with Federal University of Espírito Santo and other places

What is this page?


This page lists works of an author who doesn't have a ResearchGate profile or hasn't added the works to their profile yet. It is automatically generated from public (personal) data to further our legitimate goal of comprehensive and accurate scientific recordkeeping. If you are this author and want this page removed, please let us know.

Publications (16)


Figure 1. Binding mode and molecular interactions of 3j with the SARS-CoV-2 Mpro active site. Hydrogen bonds are represented by yellow dashed lines; π-alkyl interactions are represented by green dashed lines; π-sulfur interactions are represented by magenta dashed lines; the involved amino acid residues are represented by blue lines.
Figure 2. The RMSD graph of SARS-CoV-2 Mpro (black), the 3j (red) and nirmatrelvir (green) complexes.
Figure 3. (a) The RMSF graph of SARS-CoV-2 Mpro (black) and the 3j (red) and nirmatrelvir (green) complexes. 3D interactions performed by (b) nirmatrelvir and (c) 3j within the active site of the Mpro.
Figure 4. Temporal interaction map of Mpro + nirmatrelvir (a) and Mpro + 3j (b) complexes.
Scoring functions and diameters used in the redocking study. The table presents the redocking efficiency in terms of RMSD
Drug Repurposing Strategy to Develop New AZT Derivatives Targeting SARS‑CoV-2 Mpro: Synthesis, Computational Studies, and Enzymatic Evaluation
  • Article
  • Full-text available

January 2025

·

20 Reads

Journal of the Brazilian Chemical Society

·

Natália A. Guedes

·

Caroline S. Fontes

·

[...]

·

Valdemar Lacerda Júnior

This study focused on the synthesis and inhibitory activity of AZT (3’-azido-3’-deoxythymidine) 1,2,3-triazole derivatives against the main protease of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), supported by molecular dynamics. The triazoles were synthesized through CuAAC (copper(I)-catalyzed alkyne-azide cycloaddition) with microwave irradiation. Fourier transform infrared spectroscopy (FTIR), 1 H and 13C NMR (nuclear magnetic resonance) and mass analyses confirmed the structures of 3a-3j. A luminescence assay was carried out to evaluate main protease (Mpro) inhibition. Molecular dynamics simulation was performed using GROMACS 2023.2. Ten AZT derivatives were synthesized in good yields of 58.7 to 97.7% and NMR data presented correspondent signals for AZT, such as H-8 at 7.76-7.83 and CH3-9 at 1.77-2.06 as singlets, and H-triazole at 8.03-9.05 as a singlet. Compound 3j revealed low micromolar inhibitory activity with a half-maximal inhibitory concentration (IC50) value of 25.15 µM. The molecular dynamics simulation showed stable binding interactions over a 200 ns simulation with hydrogen bonds involving Arg188, Gln189, and Gln192 residues, which is similar to nirmatrelvir. The drug repurposing and molecular hybridization approach revealed that AZT is a valid option as a skeleton for new SARS-CoV-2 agents.

Download

Phytotoxic and Cytogenetic Assessment of Glycerol Triazole Derivatives in Model Plants and Weeds

October 2024

·

12 Reads

Chemistry & Biodiversity

Weed invasion represents a challenge for farmers, who typically manage it with herbicides. However, this approach raises concerns about environmental and human health, as well as increasing resistance in these plants with continued use. Therefore, exploring alternative methods, such as heterocyclic compounds, triazoles, is essential due to their biological and environmental relevance. This study aimed to evaluate the effects of twelve 1,2,3‐triazoles on the germination and early development of Lactuca sativa, Bidens pilosa, and Lolium multiflorum, as well as their impact on cell division in the cells of L. sativa. Triazole derivatives 4a, 4b, 4c, 4g, 4h, 4i, 4k, and 4l exhibited phytotoxicity, showing varying levels of inhibition in germination, germination speed index, and root growth. Chlorinated compounds were the most detrimental to lettuce development. B. pilosa was notably affected by compounds 4h, 4i, 4k, and 4l, while L. multiflorum responded most to triazoles 4c and 4l, with effectiveness comparable to that of the herbicide glyphosate. All derivatives, except 4l, exhibited aneugenic mechanisms of action, and 4a, 4b, 4c, 4e, 4f, and 4g showed clastogenic effects. This study demonstrated the potential of triazoles as effective agents against weed growth, with mechanisms that warrant further investigation for agricultural applications.


Design, synthesis, docking studies and bioactivity evaluation of 1,2,3-triazole eugenol derivatives

August 2024

·

54 Reads

Aim: The design, synthesis, docking studies and evaluation of the in vitro antifungal and cytotoxic properties of eugenol (EUG) containing 1,2,3-triazole derivatives are reported. Most of the derivatives have not been reported.Materials & methods: The EUG derivatives were synthesized, molecular docked and tested for their antifungal activity.Results: The compounds showed potent antifungal activity against Trichophyton rubrum, associated with dermatophytosis. Compounds 2a and 2i exhibited promising results, with 2a being four-times more potent than EUG. The binding mode prediction was similar to itraconazole in the lanosterol-14-α-demethylase wild-type and G73E mutant binding sites. Additionally, the pharmacokinetic profile prediction suggests good gastrointestinal absorption and potential oral administration.Conclusion: Compound 2a is a promising antifungal agent against dermatophytosis caused by T. rubrum.


Leishmanicidal Activity and 4D Quantitative Structure–Activity Relationship and Molecular Docking Studies of Vanillin-Containing 1,2,3-Triazole Derivatives

December 2023

·

56 Reads

·

2 Citations

Aim: The assessment of the antileishmanial potential of 22 vanillin-containing 1,2,3-triazole derivatives against Leishmania braziliensis is reported. Materials & methods: Initial screening was performed against the parasite promastigote form. The most active compound, 4b, targeted parasites within amastigotes (IC 50 = 4.2 ± 1.0 μmol l ⁻¹ ), presenting low cytotoxicity and a selective index value of 39. 4D quantitative structure–activity relationship and molecular docking studies provided insights into structure–activity and biological effects. Conclusion: A vanillin derivative with significant antileishmanial activity was identified. Enhanced activity was linked to increased electrostatic and Van der Waals interactions near the benzyl ring of the derivatives. Molecular docking indicated the inhibition of the Leishmania amazonensis sterol 14α-demethylase, using Leishmania infantum sterol 14α-demethylase as a model, without affecting the human isoform. Inhibition was active site competition with lanosterol.


Structure-Based Discovery of Thiosemicarbazones As SARS-CoV-2 Main Protease Inhibitors

July 2023

·

132 Reads

·

7 Citations

Aim: Discovery of novel SARS-CoV-2 main protease (Mpro) inhibitors using a structure-based drug discovery strategy. Materials & methods: Virtual screening employing covalent and noncovalent docking was performed to discover Mpro inhibitors, which were subsequently evaluated in biochemical and cellular assays. Results: 91 virtual hits were selected for biochemical assays, and four were confirmed as reversible inhibitors of SARS CoV-2 Mpro with IC50 values of 0.4-3 μM. They were also shown to inhibit SARS-CoV-1 Mpro and human cathepsin L. Molecular dynamics simulations indicated the stability of the Mpro inhibitor complexes and the interaction of ligands at the subsites. Conclusion: This approach led to the discovery of novel thiosemicarbazones as potent SARS-CoV-2 Mpro inhibitors.


Synthesis and Fungicide Activity on Asperisporium caricae of Glycerol Derivatives Bearing 1,2,3-Triazole Fragments

April 2023

·

35 Reads

·

6 Citations

Journal of Agricultural and Food Chemistry

In agriculture, the control of fungal infections is essential to improve crop quality and productivity. This study describes the preparation and fungicidal activity evaluation of 12 glycerol derivatives bearing 1,2,3-triazole fragments. The derivatives were prepared from glycerol in four steps. The key step corresponded to the Cu(I)-catalyzed alkyne-azide cycloaddition (CuAAC) click reaction between the azide 4-(azidomethyl)-2,2-dimethyl-1,3-dioxolane (3) and different terminal alkynes (57-91% yield). The compounds were characterized by infrared spectroscopy, nuclear magnetic resonance (1H and 13C), and high-resolution mass spectrometry. The in vitro assessment of the compounds on Asperisporium caricae, that is, the etiological agent of papaya black spot, at 750 mg L-1 showed that the glycerol derivatives significantly inhibited conidial germination with different degrees of efficacy. The most active compound 4-(3-chlorophenyl)-1-((2,2-dimethyl-1,3-dioxolan-4-yl) methyl)-1H-1,2,3-triazole (4c) presented a 91.92% inhibition. In vivo assays revealed that 4c reduced the final severity (70.7%) and area under the disease severity progress curve of black spots on papaya fruits 10 days after inoculation. The glycerol-bearing 1,2,3-triazole derivatives also present agrochemical-likeness properties. Our in silico study using molecular docking calculations show that all triazole derivatives bind favorably to the sterol 14α-demethylase (CYP51) active site at the same region of the substrate lanosterol (LAN) and fungicide propiconazole (PRO). Thus, the mechanism of action of the compounds 4a-4l may be the same as the fungicide PRO, blocking the entrance/approximation of the LAN into the CYP51 active site by steric effects. The reported results point to the fact that the glycerol derivatives may represent a scaffold to be explored for the development of new chemical agents to control papaya black spot.


Synthesis of vanillin derivatives with 1,2,3-triazole fragments and evaluation of their fungicide and fungistatic activities

March 2023

·

109 Reads

·

18 Citations

Archiv der Pharmazie

Vanillin is the main component of natural vanilla extract and is responsible for its flavoring properties. Besides its well-known applications as an additive in food and cosmetics, it has also been reported that vanillin can inhibit fungi of clinical interest, such as Candida spp., Cryptococcus spp., Aspergillus spp., as well as dermatophytes. Thus, the present work approaches the synthesis of a series of vanillin derivatives with 1,2,3-triazole fragments and the evaluation of their antifungal activities against Candida albicans, Candida glabrata, Candida parapsilosis, Candida tropicalis, Cryptococ-cus neoformans, Cryptococcus gattii, Trichophyton rubrum, and Trichophyton interdigitale strains. Twenty-two vanillin derivatives were obtained, with yields in the range of 60%-91%, from copper(I)-catalyzed alkyne-azide cycloaddition (CuAAC) click reaction between two terminal alkynes prepared from vanillin and different benzyl azides. In general, the evaluated compounds showed moderate activity against the microorganisms tested, with minimum inhibitory concentration (MIC) values ranging from 32 to >512 µg mL −1. Except for compound 3b against the C. gattii R265 strain, all vanillin derivatives showed fungicidal activity for the yeasts tested. The predicted Arch. Pharm. 2023;e202200653. wileyonlinelibrary.com/journal/ardp |


Figure 1. Synthetic route for the preparation of glycerol derivatives 4a-4k.
Figure 2. Phytotoxicity evaluation of triazoles 4a-4k. The effects of the compounds were assessed on the plant model Lactuca sativa at five concentrations. Positive control was picloram and negative controls corresponded to dichloromethane and water. The G% = germination percentage; GSI = Germination Speed Index; RG = Root Growth; AG = Aerial Growth. The means followed by the letter a were equal to the negative control water, those followed by the letter b were equal to the negative control dichloromethane and those followed by the letter c were equal to the positive control picloram (0.1%) according to the Dunnett test (p <0.05).
Figure 5. Cell cycle alterations observed in Lactuca sativa meristematic cells treated with five concentrations of triazoles 4a to 4k and positive control (picloram) and negative (water and dichloromethane). (a) bridge in anaphase, (b) interphase with micronuclei (c) C-metaphase (d) sticky chromosomes. Bar=10 μm.
Synthesis of novel glycerol-fluorinated triazole derivatives and evaluation of their phytotoxic and cytogenotoxic activities

March 2023

·

70 Reads

·

3 Citations

Anais da Academia Brasileira de Ciências

The control of weeds in agriculture is mainly conducted with the use of synthetic herbicides. However, environmental and human health concerns and increased resistance of weeds to existing herbicides have increased the pressure on researchers to find new active ingredients for weed control which present low toxicity to non-target organisms, are environmentally safe, and can be applied at low concentrations. It is herein described the synthesis of glycerol-fluorinated triazole derivatives and evaluation of their phytotoxic and cytogenotoxic activities. Starting from glycerol, ten fluorinated triazole derivatives were prepared in four steps. The assessment of them on Lactuca sativa revealed that they present effects on phytotoxic and cytogenotoxic parameters with different degrees of efficiency. The compounds 4a, 4b, 4d, 4e, 4i, and 4j have pre-emergent inhibition behavior, while all the investigated compounds showed post emergent effect. Mechanism of action as clastogenic, aneugenic, and epigenetic were observed in the lettuce root meristematic cells, with alterations as stick chromosome, bridge, delay, c-metaphase, and loss. It is believed that glycerol-fluorinated triazole derivatives possess a scaffold that can be explored towards the development of new chemicals for the control of weed species.


Synthesis and virucide activity on zika virus of 1,2,3-triazole-containing vanillin derivatives

March 2023

·

59 Reads

·

9 Citations

Antiviral Research

The Zika virus (ZIKV) is an arbovirus and belongs to the Flaviviridae family and Flavivirus genus, with dissemination in the Americas. In Brazil, the predominant strain is the Asian, promoting outbreaks that started in 2015 and are directly related to microcephaly in newborns and Guillain-Barré syndrome in adults. Recently, researchers identified a new African strain circulating in Brazil at the mid-end of 2018 and the beginning of 2019, with the potential to originate a new epidemic. To date, there is no approved vaccine or drug for the treatment of Zika syndrome, and the development of therapeutic alternatives to treat it is of relevance. A critical approach is to use natural products when searching for new chemical agents to treat Zika syndrome. The present investigation describes the preparation of a series of 1,2,3-triazoles derived from the natural product vanillin and the evaluation of their virucide activity. A series of fourteen derivatives were prepared via alkylation of vanillin followed by CuAAC (the copper(I)-catalyzed azide-alkyne cycloaddition) reaction. The compounds were fully characterized by infrared (I.R.), nuclear magnetic resonance (NMR), and high-resolution mass spectrometry (HRMS) techniques. The cytotoxicity of Vero cells and the effect on the Zika Virus of the vanillin derivatives were evaluated. It was found that the most effective compound corresponded to 4-((1-(4-isopropylbenzyl)-1H-1,2,3-triazol-4-yl)methoxy)-3-methoxybenzaldehyde (8) (EC50 = 27.14 μM, IC50 = 334.9 μM). Subsequent assessments, namely pre and post-treatment assays, internalization and adsorption inhibition assays, kinetic, electronic microscopy analyses, and zeta potential determination, revealed that compound 8 blocks the Zika virus infection in vitro by acting on the viral particle. A molecular docking study was performed, and the results are also discussed.



Citations (11)


... 19 Vanillin is a phenolic compound with ether and aldehyde functionalities and it is attractive from a pharmaceutical standpoint due to its diverse biological activities, including anticancer, antidiabetic, anti-oxidant, antisickling, antimicrobial, anti-inflammatory, aphrodisiac, cardio-protective, diuretic, and antileishmanial. [21][22][23][24] In the search of new antileishmanial agents, investigators [25][26][27][28][29] have synthesized compounds with 1,2,3-triazole-based functionality. The 1,2,3-triazole group is a highly valuable scaffold in drug discovery due to its unique chemical and biological properties. ...

Reference:

Synthesis, Antileishmanial Activity, and in silico Study of 2-Hydroxy-3-(1,2,3-triazolyl)propyl Vanillin Derivatives
Leishmanicidal Activity and 4D Quantitative Structure–Activity Relationship and Molecular Docking Studies of Vanillin-Containing 1,2,3-Triazole Derivatives
  • Citing Article
  • December 2023

... BraCoLi is a chemical library developed to facilitate the search for small-molecule chemical structures, having quick access to information on physicochemical and molecular properties. This 1176-compound collection comprises inhibitors that had been synthesized for over a decade between 2008 and 2018 to supply biological screenings to identify inhibitors with various activities, such as antiparasitic [42][43][44], antimicrobial [45][46][47], and antitumoral [48,49]. Arguably, this higher variety and consistency of data [50] could help in the search for new potential inhibitors. ...

Structure-Based Discovery of Thiosemicarbazones As SARS-CoV-2 Main Protease Inhibitors
  • Citing Article
  • July 2023

... Studies underscore the critical role of triazoles in the initial stages of the fungal infection, where spore germination and germ tube emergence are essential for establishing parasitic interactions (Klix et al., 2007). The preventive efficacy of triazole derivatives 4a-4l was also investigated by Lima et al. (2023) In experiments with curative treatment using triazole derivatives, severity was up to 30 times higher, compared to preventive treatment with triazole derivative 4f at 100 ppm for example, indicating the potential of preventive control in prevent pathogen establishment during the early stages of interaction for symptom induction. However, this assertion does not diminish the potential of the molecules in curative treatments of conilon CLR, as reductions in disease severity reached up to 90% compared to the control treatment at higher concentrations. ...

Synthesis and Fungicide Activity on Asperisporium caricae of Glycerol Derivatives Bearing 1,2,3-Triazole Fragments
  • Citing Article
  • April 2023

Journal of Agricultural and Food Chemistry

... Compounds containing a triazole moiety have attracted attention within the scientific community due to their wide range of biological applications. Antiviral activity 25 including inhibition of SARS-CoV-2 replication and viral load reduction in infected cells, 26 leishmanicidal, 27 antimicrobial, 28 antimalarial, 29 antifungal, 30 and anticancer 31 activities, have been reported for this class of bioactive compounds. 1,2,3-Triazole compounds can be synthesized through a click chemistry reaction between a terminal alkyne and an organic azide, catalyzed by copper. ...

Synthesis and virucide activity on zika virus of 1,2,3-triazole-containing vanillin derivatives
  • Citing Article
  • March 2023

Antiviral Research

... A análise fisiológica pode ser agrupada em parâmetros germinativos, englobando %G e IVG; e em parâmetro de crescimento (CR). Essa divisão ocorre por conta dos hormônios vegetais envolvidos em cada etapa do desenvolvimento da planta e a etapa de interferência que a substância-teste está envolvida (BARCELOS et al., 2023). Esse tipo de separação é encorajado, também, por possibilitar a melhor avaliação dos compostos quanto ao potencial herbicida: pré-emergente, ou seja, antes da emissão da radícula; e, pós-emergente, ou seja, após a emissão da parte radicular da plântula (BARCELOS et al., 2023). ...

Synthesis of novel glycerol-fluorinated triazole derivatives and evaluation of their phytotoxic and cytogenotoxic activities

Anais da Academia Brasileira de Ciências

... The time rates of action agreed with traditional antimicrobial studies and affirmed the strong broad-spectrum antibacterial activity of the bioactive film 3 and anticandidal activity. In addition, the test on filamentous fungi indicated deactivation of fungal growth without killing the cells, which could be described as fungistatic 55 . ...

Synthesis of vanillin derivatives with 1,2,3-triazole fragments and evaluation of their fungicide and fungistatic activities
  • Citing Article
  • March 2023

Archiv der Pharmazie

... 19 Vanillin is a phenolic compound with ether and aldehyde functionalities and it is attractive from a pharmaceutical standpoint due to its diverse biological activities, including anticancer, antidiabetic, anti-oxidant, antisickling, antimicrobial, anti-inflammatory, aphrodisiac, cardio-protective, diuretic, and antileishmanial. [21][22][23][24] In the search of new antileishmanial agents, investigators [25][26][27][28][29] have synthesized compounds with 1,2,3-triazole-based functionality. The 1,2,3-triazole group is a highly valuable scaffold in drug discovery due to its unique chemical and biological properties. ...

Eugenol derivatives with 1,2,3-triazole moieties: Oral treatment of cutaneous leishmaniasis and a quantitative structure-activity relationship model for their leishmanicidal activity
  • Citing Article
  • May 2022

Experimental Parasitology

... This fact has been demonstrated across different groups of phytopathogens, including Sclerotinia scleotiorium, Botrytis cinerea, and C. gloeosporioides. [24][25][26]48 The relevance of triazoles in agricultural disease management extends to phytopathogen genera of global importance including Fusarium, Aspergillus, Corynespora, Pseudocercospora, and Asperisporum. Triazoles exhibit notable effectiveness against fungal diseases. ...

SYNTHESIS OF GLYCEROL-FLUORINATED TRIAZOLE DERIVATIVES AND EVALUATION OF THEIR FUNGICIDAL ACTIVITY

Química Nova

... Yang et al. (2020) [56] found EC50 values of 190.58 mg L −1 and 42.04 mg L −1 of eugenol against Fusarium graminearum and Valsa mali, respectively. Lima et al. (2022) [57] reported the total mycelial growth inhibition of Colletotrichum sp., isolated from a papaya fruit with typical symptoms of anthracnose, with >500.00 mg L −1 of eugenol. Eugenol also presented excellent vapor phase activity, found by Quintana-Rodriguez et al. (2018) [58], that showed the total inhibition of the Colletotrichum lindemuthianum, Fusarium oxysporum and Botrytis cinerea mycelial growth with 0.01 mg L −1 of eugenol. ...

Synthesis of Eugenol-Fluorinated Triazole Derivatives and Evaluation of Their Fungicidal Activity

Journal of the Brazilian Chemical Society

... Finally, docking studies were conducted to investigate the binding mode of compound 3 to the herpes virus entry mediator (HVEM) (PDB ID: 1JMA). The diketone moiety is recognized for its role in enhancing the inhibitory effectiveness of related compounds against various viruses, including the NS2BNS3 proteases of the West Nile virus and the Mayaro virus [25,26]. In our recent study [24], we reported that incorporating the PhNHOC-CH-COMe group into spiropyrimidine compounds led to a twofold increase in their antiviral activity against human coronavirus 229E (HCoV-229E). ...

Discovery of novel West Nile Virus protease inhibitor based on isobenzonafuranone and triazolic derivatives of eugenol and indan-1,3-dione scaffolds