Pilar Martínez-Hidalgo's research while affiliated with King Juan Carlos University and other places
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Publications (43)
PurposeStudying the legume nodule microbiome is important for understanding the development and nutrition of the plants inhabited by the various microbes within and upon them. We analyzed the microbiomes of these underground organs from both an important crop plant (Medicago sativa) and a related legume (M. polymorpha) using metagenomic and culture...
Canola (Brassica napus L. var. oleracea) is the third most common oil-producing crop worldwide after palm and soybean. Canola cultivation requires the use of chemical fertilizers, but the amount required can be reduced by applying plant growth-promoting bacteria (PGPB). Among PGPB, endophytic bacteria have certain advantages as biofertilizers, but...
As the world population increases, improvements in crop growth and yield will be needed to meet rising food demands, especially in countries that have not developed agricultural practices optimized for their own soils and crops. In many African countries, farmers improve agricultural productivity by applying synthetic fertilizers and pesticides to...
Corn (Zea mays L.) is not only an important food source, but also has numerous uses, including for biofuels, fillers for cosmetics, glues, and so on. The amount of corn grown in the U.S. has significantly increased since the 1960’s and with it, the demand for synthetic fertilizers and pesticides/fungicides to enhance its production. However, the do...
The presence of a wide variety of emerging pollutants in natural water resources is an important global water quality challenge. Pharmaceuticals and personal care products (PPCPs) are known as emerging contaminants, widely used by modern society. This objective ensures availability and sustainable management of water and sanitation for all, accordi...
Human-industrial activity causes a remarkable increase in the arsenic (As) environmental concentrations, with a potential impact in plant and animal health, and may cause severe losses in biodiversity. This metalloid is bioaccumulative through the food chain and highly associated with different types of cancers. To overcome the inherent drawbacks o...
The genus Micromonospora has been found in nodules of several legumes and some new species of this genus were isolated from these plant organs. In this study we analysed the taxonomic diversity of Micromonospora strains isolated from alfalfa nodules in Spain and Australia on the basis of three phylogenetic markers, the rrs and gyrB genes and 16S-23...
Phase contrast micrographs of FOM; 40× magnification. Fungal samples were collected from control (A) and dual culture plates containing FOM and B. subtilis 30VD-1 (B). Arrows indicate hyphal distortions and abnormal bulbous structures, and the dotted arrow points to the extrusion of cytoplasmic contents in response to 30VD-1 treatment.
Agar-plate based clearing assays for detecting the production of cellulase (A–D), protease (E–H), pectinase (I–L), xylanase (M–P); Column 1 denotes B. simplex 30N-5; column 2, B. simplex 237; column 3, B. simplex 11; and column 4, B. subtilis 30VD-1. The colonies in each row are of similar sizes to compare variations in halo diameter.
Fusarium is a complex genus of ascomycete fungi that consists of plant pathogens of agricultural relevance. Controlling Fusarium infection in crops that leads to substantial yield losses is challenging. These economic losses along with environmental and human health concerns over the usage of chemicals in attaining disease control are shifting focu...
(i) Disease severity in scented stock seedlings. The presented treatments are uninoculated control (C), inoculation with B. subtilis 30VD-1 (30VD-1), inoculation with F. oxysporum f. sp. matthioli (FOM), co-inoculation of B. subtilis 30VD-1 and FOM (30VD-1+FOM), inoculation with F. solani (FS) and co-inoculation of B. subtilis 30VD-1 and FS (30VD-1...
Biocontrol potential of a crude butanol extract of B. subtilis 30VD-1. The treatments are D (B. subtilis 30 VD-1’s crude butanol extract at 100 μg/ml concentration). 1:10, 1:50, and 1:100 are 10-, 50-, and 100-fold dilutions of the crude butanol extract of the B. subtilis 30VD-1 culture filtrate.
The Green Revolution developed new crop varieties, which greatly improved food security worldwide. However, the growth of these plants relied heavily on chemical fertilizers and pesticides, which have led to an overuse of synthetic fertilizers, insecticides, and herbicides with serious environmental consequences and negative effects on human health...
After a forest wildfire, the microbial communities have a transient alteration in their composition. The role of the soil microbial community in the recovery of an ecosystem following such an event remains poorly understood. Thus, it is necessary to understand the plant-microbe interactions that occur in burned soils. By high-throughput sequencing,...
Chitin is an important component of the exteriors of insects and fungi. Upon degradation of chitin by a number of organisms, severe damage and even death may occur in pathogens and pests whose external surfaces contain this polymer. Currently, chemical fungicides and insecticides are the major means of controlling these disease-causing agents. Howe...
Rhizobia are the dominant bacteria within legume root nodules. Any other bacteria isolated from surface-sterilized root nodules were considered to be contaminants and thrown away. This review describes previous work on these "other bacteria" housed within legume nodules and proposes that they might be useful for promoting plant growth under harsh e...
The mutualistic interactions between nodule-forming rhizobia and specific legume host plants involve a series of signalling molecules leading to the establishment of a strong and functional symbiosis between the two partners. The competitive ability and legume host specificity of rhizobia together with the ability of both rhizobia and legumes to re...
For decades, rhizobia were thought to be the only nitrogen-fixing inhabitants of legume nodules, and biases in culture techniques prolonged this belief. However, other bacteria, which are not typical rhizobia, are often detected within nodules obtained from soil, thus revealing the existence of a phytomicrobiome where the interaction among the indi...
Throughout history, the evolution and progress of all human civilizations have been closely linked to the evolution and development of agriculture, since this is the basis of food production to sustain population and ensure social stability.
At the beginning of the twentieth century, due to great advances in medicine, world population increased sig...
Legume nodules harbour two types of bacteria, the rhizobia, responsible for their formation, and other endophytic bacteria whose role in the nodule is still poorly known. These bacteria constitute the nodule microbiome from which the rhizobia have been widely studied for decades, whereas the nodule endophytes have been started to be studied in the...
Forest fires lead to the annual disappearance of many natural formations that require the creation of firewall areas. They can be maintained by enriching their pastures with attractive plants for grazing livestock, mainly legumes, which have a high protein content and low dependence on N fertilizers due to their ability to establish nitrogen-fixing...
In this work we revise the taxonomic status of the Lotus-nodulating strains MAFF 303099T and R7A isolated in Japan and New Zealand, respectively. Their 16S rRNA gene sequences are identical and show 98.0, 99.7, 99.8 and 99.9% similarity values with respect to Mesorhizobium loti NZP 2213T, M.jarvisii ATCC 33669T, M. huakuii USDA 4779T (=CCBAU 2609T)...
Genome analysis of fourteen Mimosoid and four Papilionoid beta-rhizobia, together with fourteen reference alpha-rhizobia, for both nodulation (nod) and nitrogen-fixing (nif/fix) genes has shown phylogenetic congruence between 16S rRNA/MLSA and nif/fix genes indicating a free-living diazotrophic ancestry of the beta-rhizobia. However, deeper genomic...
In this work, we used MALDI-TOF MS for identification of strains nodulating Pisum sativum L. (peas)
in soils from Valladolid, Salamanca and León where the 30 % of the total Spanish production of peas is located. The results obtained showed a correct identification, with score values higher than 2.0, of strains isolated in the soil from León as Rhiz...
Micromonospora is a Gram-positive bacterium that can be isolated from nitrogen-fixing root nodules from healthy leguminous plants and promotes plant growth. Selected strains of Micromonospora isolated in our laboratory from alfalfa root nodules showed in vitro antifungal activity against several pathogenic fungi. Moreover, root inoculation of tomat...
In previous work, we showed that coinoculating Rhizobium leguminosarum bv. viciae 128C53 and Bacillus simplex 30N-5 onto Pisum sativum L. roots resulted in better nodulation and increased plant growth. We now expand this research to include another alpha-rhizobial species as well as a beta-rhizobium, Burkholderia tuberum STM678. We first determined...
Micromonospora is a Gram positive bacterium that can be isolated from nitrogen fixing nodules from healthy leguminous plants, where they could be beneficial to the plant. Their plant growth promoting activity in legume and non-legume plants has been previously demonstrated. The present study explores the ability of Micromonospora strains to control...
Background and aims
Cicer canariense has been shown to be a promiscuous legume. The symbiotic characteristics of several C. canariense mesorhizobial genospecies harbouring similar symbiotic genes are studied.
Methods
Comparative analysis of nodA and nifH gene phylogenies, and characterization of the symbiotic phenotypes on the basis of nodulation a...
Rhizobia grow as free-living organisms but can also induce and colonize root nodules in legume plants thereby establishing a partnership that benefits both organisms. The establishment of rhizobia as nitrogen-fixing endosymbionts within legume root nodules requires plant root colonization and the disruption of the plant cell wall to breach the host...
Cicer canariense is a threatened endemic legume from the Canary Islands where it can be nodulated by mesorhizobial strains from the symbiovar ciceri, which is the common worldwide endosymbiont of Cicer arietinum linked to the genus Mesorhizobium. However, when C. canariense was cultivated in a soil from mainland Spain, where the symbiovar ciceri is...
The species Mesorhizobim loti was isolated from nodules of Lotus corniculatus and its type strain deposited in several collections. Some of these type strains are not coincident with the original strain deposited in NZP culture collection, NZP 2213T, such as those deposited in USDA and ATCC collections before 1990. The analysis of the 16S rRNA gene...
Biotic interactions can improve agricultural productivity without costly and environmentally challenging inputs. Micromonospora strains have recently been reported as natural endophytes of legume nodules but their significance for plant development and productivity has not yet been established. The aim of this study was to determine the diversity a...
A bacterial strain designated RLAHU15T was isolated from root nodules of Lupinus albus in Spain. Phylogenetic analysis based on 16S rRNA gene sequence placed the isolate into the genus Paenibacillus being its closest relatives Paenibacillus catalpae D75T and Paenibacillus glycanilyticus DS-1T with 98.8% and 98.9% similarity, respectively. DNA hybri...
Microbial biofertilizers are becoming an effective tool for sustainable agriculture by means of the reduction of the use of chemical fertilizers. However, the knowledge of each specific plant–microorganism interaction is essential for a correct application. In this study, we analyzed the in vitro plant-growth-promotion mechanisms of a Rhizobium leg...
Cicer canariense is a threatened perennial wild chickpea endemic to the Canary Islands. In this study, rhizobia that nodulate this species in its natural habitats on La Palma (Canary Islands) were characterised. The genetic diversity and phylogeny were estimated by RAPD profiles, 16S-RFLP analysis and sequencing of the rrs, recA, glnII and nodC gen...
Citations
... For several decades, rhizobia have been recognized as the only inhabitants of legume nodules and biases in culture techniques prolonged this belief (Martinez-Hidalgo and Hirsch, 2017;Berza et al., 2021). Nevertheless, molecular advances and scientific progress achieved towards understanding legume-microbe interactions have revealed the co-existence of diverse bacterial community inside nodules composed of both symbionts and endophytes (Lyer and Rajkumar, 2017;Martínez-Hidalgo et al., 2022). ...
... have not been reported as phyllosphere endophytes, nonetheless, Lysinibacillus spp. have previously been isolated from tomato roots (Zhu et al., 2021), rice roots (Khaskheli et al., 2020;Shabanamol et al., 2021); and Peribacillus spp. was previously isolated from P. harmala and canola crop roots (Martínez-Hidalgo et al., 2021), making our study one of the few to isolate and report Peribacillus sp. as an endophyte. The 16S rRNA approach remains the gold standard for the initial identification of bacterial species, however, this approach cannot differentiate closely related bacterial species as is indicated by the formation of polytomy relationships in Figures 1-3 (Supplementary Figures 1-3; Kitahara and Miyazaki, 2013). ...
... Indeed, it has been demonstrated that Z. dumosum rhizosphere is associated with bacteria that were shown to confer stress protection [19]. Specifically, the bacterial isolate, Dietzia cinnamea, was shown to augment desiccation tolerance and significantly enhance the growth and yield of corn and wheat in lab and field trials [22,23]. Recent studies addressing the occurrence of desert endophytes in above-ground tissues revealed phylogenetically diverse communities dominated by Proteobacteria, Actinobacteria, and Firmicutes [24][25][26]. ...
... As aforementioned, biodegradation can be initiated in the presence of microbial communities such as bacteria, algae and fungi. However, the publication counts reported in González-Benítez et al. [371] indicated that bacterial remediation studies dominated the library of publications related to PPCPs biodegradation, followed by fungi-based PPCPs removal, while algal remediation studies constitute the minimal fraction of reported studies. ...
... Bioremediation encourages the reestablishment of plants on contaminated sites, which is comparatively less expensive and more suitable than chemical or physical remediation methods (Ullah, Heng, et al., 2015). The selection of microbes for bioremediation can be done either from similar contaminant sites or by preadaptation of bacteria under laboratory conditions (Molina et al., 2019). ...
... Many genome sequences belonged to the genera Myxococcus, Corallococcus, and Pyxidicoccus available in public databases provide an ideal opportunity for determining the threshold of a single molecular marker for species delineation. In comparison with other genetic markers, the gyrB gene with the much higher resolution has been fairly frequently used for determining phylogenetic relationships of closely related strains at the species level (Poirier et al., 2018;Martínez-Hidalgo et al., 2020;Klemetsen et al., 2021) and has been produced numerous reference sequences in public databases. Inspired by these results, we thus choose the gyrB gene as the candidate housekeeping gene. ...
... These authors reported that both the culture filtrates of B. subtilis and T. harzianum significantly inhibited the mycelial growth of the pathogen (Jangir et al., 2021). Khan et al. (2018) noted that 100 μg/mL of 1-butanol extraction of B. subtilis 30VD-1 hinders the 40% round spreading rate of Fusarium spp., while bacteria-infected pea seed treated with 30VD-1 showed a drop-down of wilt severity approximately 35% (Khan et al., 2018). One more in vivo application, B. subtilis V26 inhibited the development of the R. solani in potatoes and inhibited the development of the black curd disease and root canker by 81% and 63%, respectively (Ben Khedher et al., 2015). ...
... The primary organisms that maintain plant biomass production and plant health are specifically soil microorganisms [16] . Numerous researches have demonstrated that both direct and indirect modification of plant root and soil microbial populations appears to be a favorable technique to improve food crop productivity, nutritional quality, and safety with positive implications on human and environmental health [17,18] . Evidence suggests that soils with higher biodiversity levels are generally more resilient than those with lower biodiversity levels because they are more resilient to environmental perturbations [19] . ...
... N, which is absorbed from soil in the form of nitrate and ammonium, is essential for plant growth and development. The conversion of atmospheric N into ammonia takes place through different chemical processes, among which organic N fixation is the most important (Janczarek et al., 2015;Menéndez et al., 2017). Although N contributes the most to plant growth and development from an early stage, the N content decreased in the root and shoot tissue of both Mungbean cultivars under Cr stress levels, which, in turn, resulted in decreased plant growth and development, as well as decreased pod and seed yield per plant. ...
... Gram-negative microorganisms have been shown to be ineffective elicitors. Regarding the chitin composition of the cell wall, many treatments involving fungus and Gram-negative bacteria have been conducted [191]. The findings show that trans-resveratrol and transpiceatannol may be produced in controlled peanut culture using sterilized fungus and chitin as an efficient and quick elicitor that poses no threat from live bacteria. ...