Philip S. Hammond’s research while affiliated with University of St Andrews and other places

What is this page?


This page lists works of an author who doesn't have a ResearchGate profile or hasn't added the works to their profile yet. It is automatically generated from public (personal) data to further our legitimate goal of comprehensive and accurate scientific recordkeeping. If you are this author and want this page removed, please let us know.

Publications (138)


Bathymetry of the Black Sea.
Map of F‐POD locations along the coast of the Black Sea.
Monthly variation in detection positive minutes per day during 2020–2022 in the Black Sea, grouped into three regions (South‐East – Georgia and Türkiye, West – Bulgaria and Romania, North‐West – Ukraine). The histograms are the sums of mean daily detection positive minutes divided by the number of logged days per month, grouped into the three regions indicated by the results of the regional selection modelling process.
Seasonal pattern of acoustic activity of Black Sea harbour porpoise in the (a) South‐East region (b) West region (c) North‐West region, shown as the partial effect of Month on detection positive minutes (DPM). The grey band around the fitted smooth function represents the 95% confidence interval.
Diel pattern of acoustic activity of Black Sea harbour porpoise in the (a) South‐East region (GMT + 3) (b) West region (GMT + 2) (c) North‐West region (GMT + 2), shown as the partial effect of Hour on DPM. The grey band around the fitted smooth function represents the 95% confidence interval. To provide context in terms of seasonal variation in daylight, the vertical black lines indicate the earliest and latest time of sunrise and sunset in the region, which were: (a) 05:02–08:37 and 17:09–20:51 in the South‐East region; (b) 04:22–07:38 and 16:30–19:52 in the West region and (c) 04:04–07:38 and 16:13–19:53 in the North‐West region.

+1

Seasonal and diel patterns in Black Sea harbour porpoise acoustic activity in 2020–2022
  • Article
  • Full-text available

October 2024

·

162 Reads

·

·

·

[...]

·

The Black Sea is a semi‐enclosed inland sea with an unevenly distributed extensive coastal shelf area and anoxic deep waters. It is inhabited by common and bottlenose dolphins, as well as harbour porpoises, all represented by local subspecies. Between September 2020 and October 2022, 19 F‐PODs deployed by research teams from Bulgaria, Georgia, Romania, Türkiye and Ukraine collected data on acoustic activity of Black Sea harbour porpoises. Strong seasonal and diel patterns were found, which varied in three regions. In the south‐eastern part of the Black Sea, harbour porpoise acoustic activity was higher from January to May, with a peak in April. This pattern agrees with the seasonal anchovy migration from the winter spawning grounds in warmer waters in the south‐eastern region to feeding grounds on the productive shallow north‐west shelf. The diel pattern showed strong nocturnal acoustic activity, which is consistent with anchovy vertical migration. Porpoises on the western side of the Black Sea exhibited a bimodal seasonal pattern in acoustic activity, with a larger peak in April and a smaller one in October. Diel activity was primarily nocturnal. On the north‐west shelf, harbour porpoise acoustic activity was mostly recorded during the warm period from April to October. The diel pattern showed activity mainly during daylight with two peaks: a smaller one approximately at dawn and a larger one at dusk. This pattern is similar to the vertical migrations of sprat. Overall, the results of the study were consistent with the prey being an important driver of seasonal and diel dynamics of harbour porpoise acoustic activity.

Download

Changes in blue whale survival and abundance in the Gulf of California

May 2024

·

58 Reads

Marine Mammal Science

Understanding the drivers of population abundance and distribution is fundamental to ecology and key to informing conservation actions, particularly in endangered species like blue whales ( Balaenoptera musculus ). Historically, some Eastern North Pacific blue whales have aggregated in the Gulf of California (GoC) each winter. Using photo‐identification data collected around Loreto Bay from 1984 to 2020, we analyzed 453 sightings histories using mark‐recapture models. Estimated apparent survival (including permanent emigration) decreased from 0.991, 95% CI [0.977, 0.997] in 1985 to 0.889, 95% CI [0.807, 0.939] in 2019. The estimated number of whales using the study area declined from 96 whales, 95% CI [50, 254] in 2012 to 13 whales, 95% CIs [12, 23 and 12, 28] in 2018 and 2019. Abundance of the whole Eastern North Pacific population is slowly increasing, so our results likely reflect declining usage of the GoC. Linear models found a relationship between the number of whales in the GoC and the difference in sea surface temperature between the study area and the Costa Rica Dome wintering area, suggesting that environmental variation could explain variation in blue whale numbers in the GoC. These results highlight the importance of tracking population dynamics as changing environmental conditions affect the range and distribution of populations.



Distribution and habitat use modelling from satellite tracking data of humpback whales in Brazil agree with shipboard survey data modelling

October 2023

·

156 Reads

Marine Ecology Progress Series

Statistical modelling of animal distributions has been widely applied to explain how mobile species use their habitats. The distribution of and habitat use by humpback whales Megaptera novaeangliae off the eastern coast of Brazil have previously been investigated by modelling visual survey data. Here, we modelled distribution in their breeding range using individual tracking data to compare ecological inferences with those from previous models from line transect data. A generalised estimating equation framework was used to model the tracking data and pseudo-absences as functions of spatial covariates. Covariates considered were latitude and longitude, sea surface temperature (SST), current and wind speeds near the surface, distances to shelf-break and the coast, sea bottom depth and slope, and a factor variable representing ‘shelter’. Two modelling exercises were developed: a habitat use model (HUM) and a distribution model (DIM). Covariates retained in the selected HUM were SST, distance to coast and shelf-break, current and wind speeds and shelter. Covariates retained in the selected DIM were latitude/longitude, current speed and distances to shelf-break and coast. The modelled relationships between whale occurrence and environmental covariates using tracking data were similar to those using line transect data. Distribution maps were also similar, supporting higher densities around the Abrolhos Archipelago and to its south. We showed that habitat use and distribution of this population in the area could be similarly inferred by modelling either line transect or tracking data. Using these 2 approaches in conjunction can strengthen the understanding of important ecological aspects of animal populations.


Estimates of cetacean abundance in European Atlantic waters in summer 2022 from the SCANS-IV aerial and shipboard surveys

September 2023

·

1,391 Reads

·

48 Citations

The large-scale international survey SCANS-IV from summer 2022 is complementing previous surveys (SCANS 1994, SCANS-II/CODA 2005/2007, SCANS-III 2016). These data provide information on changes in the abundance and distribution of the most abundant cetacean species over a considerable period of almost three decades. This enables an assessment of the conservation status and is thus an important basis for establishing effective conservation measures. The SCANS-IV project is supported by the governments of Denmark, France, Germany, the Netherlands, Spain, Sweden, Portugal and the United Kingdom. SCANS-IV, in which teams of observers in eight aircraft and on one research vessel were deployed simultaneously in a study area from southern Norway to the Strait of Gibraltar in Portugal, investigated the European Atlantic in the summer of 2022 with the largest search effort to date. Over a period of six weeks, an area of 1.7 million km² was covered and a distance of 75,000 km was travelled along transects.


Assessing spatial patterns and density of a dolphin population through signature whistles

September 2023

·

98 Reads

·

1 Citation

Marine Mammal Science

Some dolphin species produce signature whistles, which may allow the identification of individual dolphins using passive acoustic monitoring (PAM). Identifying individuals by their sounds may enhance the opportunities for monitoring and addressing biological and ecological questions about these species. Here, we explored the potential of signature whistles to investigate ecological aspects of a resident bottlenose dolphin population. Using a limited data set, with few individuals recognized by signature whistles, combined with spatial capture‐recapture (SCR) methods, we investigated how effective such approach is describing spatial use patterns and estimating density for this population. The data were collected using 4–6 stationary bottom‐moored recorders. Since only eight signature whistles were identified, our density estimate may represent a subset of the entire population. However, even with only a few signature whistles identified, our results confirmed the center of the core area used by these dolphins as the area with the highest encounter probability. In addition, our results provided evidence that these dolphins have the same spatial use pattern at night as during the day. This study shows that SCR analysis of signature whistle data can improve our ecological knowledge and understanding of dolphin populations.


Effect of kelp gull harassment on southern right whale calf survival: a long-term capture-recapture analysis

June 2023

·

101 Reads

·

2 Citations

Kelp gulls (Larus dominicanus) commonly feed on the skin and blubber of surfacing southern right whales (SRW, Eubalaena australis) in the near shore waters of Península Valdés (PV), Argentina. Mothers and especially calves respond to gull attacks by changing their swimming speeds, resting postures and overall behaviour. Gull-inflicted wounds per calf have increased markedly since the mid-1990s. Unusually high mortality of young calves occurred locally after 2003, and increasing evidence points to gull harassment as a factor contributing to the excess deaths. After leaving PV, calves undertake a long migration with their mothers to summer feeding areas; their health during this strenuous exertion is likely to affect their probabilities of first-year survival. To explore the effects of gull-inflicted wounds on calf survival, we analysed 44 capture-recapture observations between 1974 and 2017, for 597 whales photo-identified in their years of birth between 1974 and 2011. We found a marked decrease in first-year survival associated with an increase in wound severity over time. Our analysis supports recent studies indicating that gull harassment at PV may impact SRW population dynamics.


Phocoena phocoena (Baltic Sea subpopulation)

April 2023

·

104 Reads

·

1 Citation

The size of the Baltic Proper subpopulation of Harbour Porpoises is estimated to be fewer than 250 mature animals. A continuing decline in mature animals can be inferred based on information on the number of animals bycaught in fishing gear compared to the potential growth rate of the Baltic Proper subpopulation. Other threats to the reproduction and survival of Harbour Porpoises, including contaminants, noise, and prey depletion, are also ongoing for this subpopulation. All mature individuals of the Baltic Proper subpopulation belong to one subpopulation, which cannot be rescued by immigration of individuals from another subpopulation. Thus, the subpopulation meets criterion C2a(ii). This subpopulation was listed as Critically Endangered (C2a(ii)) on the Red List in 2016 and it remains Critically Endangered (C2a(ii)) in this updated assessment.



Fig. 1 Map showing the approximate location of the South Abaco bottlenose dolphin population on Little Bahama Bank (LBB; northern Bahamas) in relation to other local populations (after Rogers et al. 2004). Bathymetry data: GEBCO Compilation Group (2020)
Fig. 2 Estimates of apparent survival for (a) calves, (b) juveniles and (c) adults. For calves and juveniles, modelaveraged estimates from the hurricane effect models are shown as well as estimates from the base model (see text and Tables 4 and 5). The hurricane covariates included in these models, either 'time since last direct and/or major hurricane year' or 'cumulative count of direct and/or major hurricane years since 1992', are shown on the top axis in panels (a) and (b)
Fig. 3 Population viability analysis for the South Abaco population using estimated survival values for calves, juveniles and adults from the base models (see text). Stoch-r mean (stochastic) instantaneous population growth rate, SD(r) standard deviation of r, PE probability of extinction, mean TE mean time to extinction (years)
Investigating local population dynamics of bottlenose dolphins in the northern Bahamas and the impact of hurricanes on survival

September 2022

·

173 Reads

·

11 Citations

Mammalian Biology

Little Bahama Bank in the northern Bahamas supports several populations of bottlenose dolphins ( Tursiops truncatus ). We provide the first estimates of birth rate and age-class-specific apparent survival rates for the local South Abaco population using data from a long-term (1997–2014) photo-identification (photo-ID) study and use the estimated life history parameters in a population viability analysis (PVA) to predict future population trends. Hurricane events are predicted to become more intense due to climate change but knowledge of how hurricanes may impact cetacean populations is limited. Little Bahama Bank is subject to hurricane activity, so we also investigate the potential impact of hurricanes on calf, juvenile and adult survival. Photo-ID data confirmed the existence of a core adult population with relatively high site fidelity in South Abaco, but also evidence of transient animals. Estimated annual birth rate was 0.278 (95% CI: 0.241–0.337). We found strong support for a decline in apparent survival for all age-classes. Estimated survival declined by 9% in adults (0.941 in 1998, to 0.855 in 2013), 5% in juveniles (0.820 in 2000, to 0.767 in 2013) and 36% in calves (0.970 in 1997, to 0.606 in 2013). Evidence that survival was influenced by repeated hurricane activity leading to increased mortality and/or emigration was stronger for calves and juveniles than for adults. PVA simulations of an assumed isolated South Abaco population showed that declines would lead to extinction within decades, even under the most optimistic scenario. Future work should focus on establishing if South Abaco is part of natural source–sink metapopulation dynamics on Little Bahama Bank by assessing trends in abundance in local populations and establishing how they interact; this will be important for assessing their conservation status in a potentially increasingly changing environment.


Citations (71)


... However, one clear limitation of the generalization of our intercalibration results on cetaceans was the need to pool all species of cetaceans to obtain a large enough sample size for analyses. Species with potentially differing detection probability (e.g. common dolphins, bottlenose dolphins and harbour porpoises) due to their behaviour or group size (Barlow et al., 2001;Authier et al., 2018;Gilles et al., 2023) were lumped into one taxonomic group. Given the high taxonomic heterogeneity, it is unclear whether the resulting intercalibration factor can be applied to each of the cetacean species. ...

Reference:

Going digital: challenges in monitoring marine megafauna when comparing results from visual and digital aerial surveys
Estimates of cetacean abundance in European Atlantic waters in summer 2022 from the SCANS-IV aerial and shipboard surveys

... Passive acoustic monitoring is generally regarded as a more cost-effective method than boat-based surveys (Evans & Hammond, 2004;Zimmer, 2011); therefore, it represents an alternative or a complement to traditional photo-identification for some dolphin populations Fearey et al., 2022;Longden et al., 2020). Recently, it has been shown that SWs can be used effectively to provide data that can be analysed with spatial capture e recapture models to monitor dolphin populations in different contexts (Romeu et al., 2024). Besides some limitations, the advantages of using SWs combined with spatial capturerecapture models include the possibility of monitoring individuals in poor weather conditions and at night, in more than one site simultaneously and for an extended continuous period. ...

Assessing spatial patterns and density of a dolphin population through signature whistles
  • Citing Article
  • September 2023

Marine Mammal Science

... and stress levels as a consequence of persistent harassment (Rowntree et al. 1998, Poulin 2011, Marón et al. 2015, Fernández Ajó et al. 2020, Azizeh et al. 2021. Prolonged intense micropredation can decrease the growth of prey or host organisms (Jones 2007) and even lead to death, particularly if the victims are young (Aurioles & Llinas 1987, Gallagher et al. 2015, Agrelo et al. 2023. Reports of seabirds attacking marine mammals in coastal and oceanic habitats have become more frequent in recent decades, with many cases involving gulls attacking cetaceans (Groch 2001, Pavés et al. 2008, Gallagher et al. 2015, Seguel et al. 2017, Towers & Gasco 2020, Harkness & Sprogis 2020, Carroll et al. 2022. ...

Effect of kelp gull harassment on southern right whale calf survival: a long-term capture-recapture analysis
  • Citing Article
  • June 2023

... Hurricane risk is, therefore, higher for the more densely populated islands in the north, and lower for those in the south because of the influence of the Cuban landmass that helps weaken the storms (Holdschlag and Ratter, 2013). The impacts across the archipelago vary across seasons but can range from changes in wave conditions and carbonate systems (Boss and Neumann, 1993;Sahoo et al., 2019), to increases in invasives such as lionfish and declines in cetaceans such as bottlenose dolphins (Johnston and Purkis, 2015;Coxon et al., 2022). When the freshwater lens becomes inundated with saltwater, water resources are unusable (Welsh et al., 2022). ...

Investigating local population dynamics of bottlenose dolphins in the northern Bahamas and the impact of hurricanes on survival

Mammalian Biology

... This reflects their opportunistic feeding strategy, allowing them to promptly exploit productive areas that are highly variable in space and time across the basin (Notarbartolo di Sciara et al., 2016). Therefore, in summer, this species shows a restricted range limited to the Corso-Ligurian-Provenc ßal Basin feeding grounds (Druon et al., 2012;Panigada et al., 2017a;Zanardelli et al., 2022), where the bulk of the total 3,282 individuals estimated by the ASI congregates. Its presence is considered limited in the most eastern part of the Mediterranean Sea (Stephens et al., 2021) and a longitudinal and latitudinal gradient from west to east and north to south in Figure 1 Fin whale, Balaenoptera physalus modeling results. ...

Long‐term photo‐identification study of fin whales in the Pelagos Sanctuary (NW Mediterranean) as a baseline for targeted conservation and mitigation measures

Aquatic Conservation Marine and Freshwater Ecosystems

... The ability to identify and single out individuals, groups, or entire populations is a key part of wildlife research and the basis for many population dynamics and behavioural studies (Krebs, 1999;Lapointe et al., 2013;Schofield et al., 2020). Mark and recapture surveys, for example, where the ability to distinguish between known and new entries is relevant, greatly benefit from it (Lindberg, 2012;Ashe and Hammond, 2022). The simplest and least invasive way of differentiating subjects is to rely on their unique individual features (Hiby et al., 2009;Moskvyak et al., 2021). ...

Effect of matching uncertainty on population parameter estimation in mark-recapture analysis of photo-identification data

Mammalian Biology

... For example, across their range orcas have been found to dive as deep as 254 m in transient killer whales 36 , 300 m in Northern Resident killer whales 37 , 379 m in Southern Resident killer whales 9 , 480 m in Eastern North Pacific Offshore killer whales 38 and as deep as 1083 m in the Southern Ocean 39 (Table 1). Maximum depths of 221 m were recorded for North Atlantic orca tracked in northern Norway 40 , with a mean range of 9-10 m (data from four individuals), compared to an average depth of 13 m recorded in our data. The maximum dive duration of 11.1 min reported in current study falls within previously reported maxima for different orca populations ranging between 10 and 15.9 min 36,37,41,42 , while the average dive duration is similar to durations recorded in both adult and juvenile orcas across a range of behaviours 43 . ...

Feeding characteristics and prey profitability in five herring‐feeding killer whales (Orcinus orca) in northern Norway

Marine Mammal Science

... Additionally, when assessing mortality limits to determine the best management strategy it is essential to factor in potential sources of bias (Wade, 1998;Punt and Donovan, 2007;Moore et al., 2021). Recent work from OSPAR Marine Mammal Expert Group (OMMEG) tuned the PBR method to a fully quantitative interpretation of the ASCOBANS conservation objective (Genu et al., 2021), defining a time frame of 100 years and a probability of 80%. These values were then adopted for use within OSPAR and HELCOM as a part of their recent assessment processes (QSR 2023 and HOLAS 3), and are also within the range of values of probability and timeframes recommended to be used in initial work completed by ASCOBANS as a part of the process of updating their conservation objective . ...

Evaluating Strategies for Managing Anthropogenic Mortality on Marine Mammals: An R Implementation With the Package RLA

... Studies are needed to estimate bycatch mortality, as suggested by Wade (1998) and Moore et al. (2021), including both commercial and sports fisheries, to carry out a population estimate of the FMA IVe or, at least, of the estuary and continue with public awareness campaigns to increase reports of strandings and have a better evaluation of bycatch. ...

Estimating Bycatch Mortality for Marine Mammals: Concepts and Best Practices

... These could be transitional periods, possibly associated with either a change in diet or a shift in available prey. For harbour porpoises, we have little data from the North Sea, but the predictions obtained were consistent with the recent distribution obtained by Gilles et al. (2016), with a westward concentration of animals in spring and summer, consistent with the distribution of whiting and cod (Gadus morhua, Ransijn et al., 2021). In autumn and winter, the predictions were more consistent with those of Waggitt et al. (2020), with a concentration of animals to the east and south of the North Sea, consistent with the distribution of sprat (Sprattus sprattus) and herring (Clupea harengus, Ransijn et al., 2021). ...

Integrating disparate datasets to model the functional response of a marine predator: A case study of harbour porpoises in the southern North Sea