Paul C. Southgate’s research while affiliated with University of the Sunshine Coast and other places

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Publications (267)


Sandfish Holothuria scabra ocean‐based nursery culture production system using mosquito net hapas.
Map of Maliwaliw Island showing the study site (red dot).
Field experiment design investigating the effects of hapa cleaning interval using double‐ and triple‐layer mosquito net hapas (A) and initial stocking density using triple‐layer mosquito net hapas (B) on sandfish (Holothuria scabra) juvenile performance. Each treatment had three replicates in both experiments.
Average (±SE, n = 50) weight (g), absolute growth rates (AGR; g day⁻¹) and survival (%) of sandfish, Holothuria scabra, juveniles cultured in different combination treatments of mosquito net hapa layers and cleaning intervals at each monitoring point (D30 and D60) in Experiment 1. Different letters at each monitoring point indicate significant differences (p < 0.05) among treatments.
Average (±SE, n = 50) weight (g), absolute growth rates (AGR; g day⁻¹) and survival (%) of sandfish juveniles reared in triple‐layer mosquito net hapas within different stocking density treatments in Experiment 2. Different letters at each monitoring point (D30 and D60) indicate significant differences (p < 0.05) among stocking densities (i.e., SD500, SD750 and SD1000).
Effects of Cleaning Interval, Hapa Layers and Stocking Density on Growth Performance of Sandfish Holothuria scabra Juveniles in Ocean‐Based Nursery Production Systems
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  • Full-text available

November 2024

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26 Reads

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Jay R C. Gorospe

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The mass production of release‐size H. scabra juveniles in the Philippines is primarily done in a floating hapa ocean‐based nursery systems. To optimize its production, understanding the influence of different culture conditions and their management is necessary. In this study, the effects of hapa net cleaning interval, hapa layers, and stocking density on growth and survival of sandfish juveniles reared in floating hapa (L × W × H: 1.7 m × 0.9 m × 1.2 m) nursery system were assessed in two 60‐day field studies. Results showed that the number of hapa net layers and cleaning interval had negligible effects on the growth performance of sandfish juveniles by day 30. However, sandfish juvenile survival was affected by hapa net layers with higher survival in triple‐layer mosquito net hapas (40.5 ± 0.97%) compared to double‐layer mosquito net hapas (17.8 ± 0.62%). By day 60, the growth performance of sandfish juveniles in double‐layer hapas was higher (average weight: 5.0 ± 0.97 g; AGR: 0.13 ± 0.03 g day⁻¹) compared to that in triple‐layer mosquito hapa nets (average weight: 3.1 ± 0.23 g; AGR: 0.07 ± 0.01 g day⁻¹). Survival of sandfish juveniles reared in double‐layer mosquito net hapas, cleaned at 5‐day intervals (85.9 ± 4.58%) was significantly lower compared to all other treatments. Conversely, initial juvenile stocking density did not significantly affect the growth performance and survival of sandfish juveniles in both rearing cycles. We therefore recommend the use of triple‐layer mosquito net hapas during the first 30‐day culture period and an initial stocking density of 1000 post‐settled sandfish juveniles to increase production output. After 30 days, when the juveniles are larger, the use of double‐layer mosquito net hapas and lower stocking density are recommended to reduce cost and enhance growth performance. Where cleaning is necessary, hapa nets may be cleaned at 10‐day intervals to improve survival. The results of this study have important implications for optimizing the production of release‐size sandfish in ocean‐based nursery systems in the Philippines.

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Size: ridgeline plots illustrating the distribution of (A) dorsoventral heights and (B) hinge lengths for spat of Pinctada maxima that were fed the studied microalgal diets for 35 days. Responses were benchmarked against spat maintained without microalgae (i.e., control). In each panel, the vertical dashed‐line and grey banding identifies the mean and inter‐quartile range, respectively, of spat at the start of this study.
Weight: ridgeline plot illustrating the distribution of wet‐weights for spat of Pinctada maxima that were fed the studied microalgal diets for 35 days. Responses were benchmarked against spat maintained without microalgae (i.e., control). The vertical dashed‐line and grey banding identify the mean and inter‐quartile range, respectively, of spat at the start of this study.
Quality: ridgeline plot illustrating the distribution of organic content for spat of Pinctada maxima spat that were fed the studied microalgal diets for 35 days. Responses were benchmarked against spat maintained without microalgae (i.e., control).
Suitability of Monospecific and Mixed Microalgal Diets for Spat of the Silver‐Lip Pearl Oyster Pinctada maxima

November 2024

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12 Reads

Expansion of pearl production using the silver‐lip pearl oyster, Pinctada maxima, depends on increasing the availability of high‐quality spat from hatcheries and optimization of existing hatchery protocols. Research to develop feeding regimes yielding higher quality spat is seen as a priority. This study evaluated the suitability of three microalgae (Rebecca salina, Chaetoceros simplex and Tisochrysis lutea), fed singly and in combination, for spat of P. maxima and assessed whether mixed diets yielded spat of higher quality. A model‐fitting approach examined the response of spat fed microalgal diets for 35 days. Organic content of spat, as an indicator of quality, as well as metrics relating to spat size and weight were considered. On the basis of organic content, all microalgal diets tested were found suitable and there was no evidence that the mixed diets yielded higher quality spat compared to monospecific diets. Further, any gains in spat size attributed to the mixed microalgal diets were comparatively modest. Contrary to long‐held assumptions, our results indicate that monospecific microalgal diets are not necessarily inferior to mixed microalgal diets for on‐growing spat of P. maxima. They indicate potential to develop simpler and cheaper protocols for culture of P. maxima spat in land‐based systems.



Figure 1. Map of the two locations (inshore and offshore) within each of two bays (Nacoubau and Namarai) where spat collectors were deployed. Reef formations (UNEP-WCMC et al. 2021) appear in blue and mangrove strands (UNITAR & UNOSAT 2021) appear in green. The top right inset provides geographic context for the map within Fiji.
Figure 2. Diagrammatic representation of how spat collectors were deployed. Each spat collector consisted of numerous 75-mm lengths of perforated black-plastic ribbon threaded onto an 8-mm diameter rope to 1 m in length.
BYCATCH OF TROPICAL ROCK OYSTERS FROM SPAT COLLECTION ACTIVITIES TARGETING PEARL OYSTERS IN FIJI

August 2024

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39 Reads

Journal of Shellfish Research

Pearl culture in Fiji relies on a supply of pearl oysters obtained through the strategic deployment of spat collectors. Although the design and deployment of spat collectors aim to maximize the recruitment of pearl oysters (Pinctada and Pteria spp.), this activity incidentally captures many other bivalves as bycatch. This study explored whether tropical rock oysters (specifically Magallana bilineata and Saccostrea spp.) were present and sufficiently abundant as bycatch from pearl oyster spat collectors, to support additional commercial opportunities. The results showed that the absolute (0.7 ± 2.1 spat collector −1) and proportional (2.9% of all bivalves) abundance of these taxa was very low, which would limit oyster harvest in meaningful quantities. Although the prospect of creating additional revenue streams from bycatch could be seen as an incentive to on-grow and sell tropical rock oysters despite their low abundance, it is argued that greater benefit would come from prioritizing activities related to pearl oysters and associated downstream products such as mabé pearl, shellcraft, and pearl-meat production. Ultimately, existing spat collection activities within the cultured pearl sector did not have the anticipated potential to support supplemental aquaculture of tropical rock oysters.


GROWTH AND SURVIVAL OF SANDFISH Holothuria scabra REARED IN OCEAN AND ADVANCED NURSERY PEN CULTURE PRODUCTION SYSTEMS: EXPERIENCES OF SEA CUCUMBER FARMERS FROM THE PHILIPPINES

Development of an appropriate nursery culture system is critical in improving the survival of post-release sandfish juveniles within different production systems. This study evaluated the growth performance of sandfish juveniles reared in floating hapa enclosures and advanced nursery culture pens by small-scale grouper farmers within rural coastal communities in Bolinao, northwestern Philippines. Growth performance and survival of sandfish juveniles reared in floating hapas were high (Table 1a). From an initial average weight of 0.03±0.002 g, sandfish attained an average weight of 4.28 ± 0.23 by day 66. Highest growth rates of sandfish juveniles reared in floating hapas was recorded by day 66 at 0.09 ± 0.02 g day-1 while lowest growth rate was recorded by day 24 at 0.04 ± 0.01 g day-1. Additionally, survival of sandfish juveniles at the end of the monitoring period was high at 56.8 %. Likewise, growth performance and survival of sandfish reared in the advanced pens were high (Table 1b). Highest growth rate of sandfish reared in the advanced pens was recorded by day 86 at 0.89 ± 0.1 g day-1 while the lowest growth rates was recorded at the end of the study at 0.15±0.3 g day-1. Despite the decreased in growth rates, sandfish attained 102.7±6.2 g after 157 days of rearing in the grow-out pens. This study showed the viability of releasing sandfish juveniles directly into advanced nursery pens as indicated by high growth performance and apparent survival of sandfish reared in the pens. Additionally, results of the study provide basis for the utilization of ocean-based advance nursery and development of a production model involving small-scale aquaculture farmers to increase sandfish juvenile production and ultimately the realization of the socio-economic benefits of sea cucumber mariculture.


Map placing the Nusa Islands (red highlight) in geographical context within Papua New Guinea. Top left insert places the map in geographical context within the southwest Pacific region.
Tools that were used for shellcraft at the Nusa Islands of Papua New Guinea: (A) mechanical drill, (B) pump drill, (C) coping saw, (D) jewellery saw, (E) cutter pliers, (F) jewellery pliers, (G) needle file, (H) stone file, (I) grinder, and (J) electric rotary.
Products produced from shellcraft at the Nusa Islands of Papua New Guinea were categorised as (A) bangles, (B) bracelets, (C) earrings, (D) necklaces, or (E) pendants.
Variation in tool (n = 10) ownership among artisans (n = 36) visualised as a biplot of Jaccard distances using non-metric multidimensional scaling (nMDS). Positioning of a specific tool reflects its association with the plot configuration; only those tools that significantly (p < 0.05) influenced the variation in tool ownership are shown.
Human dimensions in shellcraft: tool ownership differentiates taxa utilised and products produced

June 2024

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45 Reads

Throughout the Pacific Islands, shellcraft has begun to feature prominently in development intervention which aims to generate positive livelihood outcomes for coastal communities. This activity often involves the post-harvest processing of natural assets, namely shells and skeletal remains of marine taxa, into jewellery by individuals or small-sized enterprises. To foster participation in shellcraft, development intervention commonly involves gifting or subsidising physical assets. Yet knowledge of the natural (i.e., taxa) and physical (i.e., tools) assets required for shellcraft remains scant. An understanding of human dimensions in shellcraft pertaining to patterns in asset use, such as how tool ownership differentiates taxa utilised and products produced, is important for determining if access to a specific tool is necessary, or an encumbrance, for achieving a desired outcome. In this study, we identified tools used and variation in tool ownership among artisans engaged in shellcraft to afford an accurate and realistic understanding of the tools required to participate in this activity. We then evaluate how ownership of a specific tool or type of tool differentiates both taxa utilisation and product production for shellcraft. Results indicate ownership of neither all nor any specific tool was required to participate in shellcraft, with artisans typically owning a unique combination of tools. Furthermore, results identified that some specific tools were critical for affecting the attractiveness of utilising certain taxa or producing certain products. Implications of the significant relationships between specific tools and certain taxa or products are discussed in the context of development intervention and commonly articulated theories of change where shellcraft is linked to subsistence fishing, aquaculture, or tourism.


Figure 1. Maps of the Nusa Islands, Papua New Guinea. (A) The Tigak Islands group (yellow overlay) in geographical context of Papua New Guinea. (B) The Nusa Islands in the geographical context of the Tigak Islands group (yellow overlay). (C) Dashed line encloses the area (ca. 400 ha) at the Nusa Islands in which the studied shellcraft fishery occurs based on local marine tenure arrangements; substrate coverage within the boundary was adapted from Sambrook et al. (2020), with permission.
Figure 3. Illustration of significant associations (P < .05; Fisher's exact test) between marine taxa (n = 46) fished for shellcraft at the Nusa Islands and the where social-ecological factor investigated in this study. Taxa (Conomurex luhuanus, Conus litteratus, and Cypraea tigris) often fished together during a single fishing trip are highlighted in yellow. Illustration of source habitats adapted from Tilley et al. (2020), with permission. Photos: N.S.M Simard.
Figure 4. Annual fishing trips per marine taxa fished for shellcraft at the Nusa Islands. Boxplots show the mean (◆), median (central line), and interquartile range (box). Only taxa (n = 29) fished by a significant number (n ≥ 6) of households are shown.
Summary of Marine Taxa, by Taxonomic Class, Fished for Shellcraft at the Nusa Islands between July 2018 and July 2019.
Significant Results from Cumulative Link Models Evaluating the Influence of Social-Ecological Factors on Perceptions of Stock status for Marine Taxa Fished for Shellcraft at the Nusa Islands by a Significant Number (n ≥ 6) of Households. Symbols Indicate Whether a Social-Ecological Factor Positively (+) or Negatively (−) Influenced Perceptions of Stock status for a Given Taxon.
Social-ecological Factors, Stock Status, and Governance Relating to a Shellcraft Fishery in the Indo-Pacific Region

June 2024

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66 Reads

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1 Citation

Journal of Ethnobiology

Shellcraft is a livelihood activity that utilizes shells and skeletal remains of marine taxa for producing ornamental and decorative items. Despite an increasing importance of shellcraft in coastal areas of the Indo-Pacific region, information necessary for stakeholders to identify and respond to change through policy and management decisions is often lacking for fisheries that support this activity. To address this knowledge gap, a quantitative approach was taken to evaluate social-ecological factors (the what, where, how much, who, when, how, how often, and how long) in a “shellcraft fishery” centered at the Nusa Islands of Papua New Guinea. More than 151,100 individuals across 69 marine taxa were fished annually for shellcraft at the Nusa Islands; fishing was infrequent and quantities fished were low for most taxa when compared with other small-scale fisheries. Fishing most taxa had no association with the main demographic divisions within households although, in terms of participation and catch richness, women were the main actors. Gleaning, combing, and free-diving were the only fishing techniques used, with taxa primarily fished by gleaning intertidal habitats during the day. To contextualize sustainability of this fishery, local ecological knowledge-based perceptions of stock status for the marine taxa fished were examined. Considerations for governance, which included synthesis of existing regulatory measures and aspirations, are also discussed. Since shellcraft occurs throughout the Indo-Pacific region and there are commonalities in taxa utilized, this study provides a basis for comparative analysis of shellcraft fisheries within the region.


Complex patterns of genetic structure in the sea cucumber Holothuria (Metriatyla) scabra from the Philippines: implications for aquaculture and fishery management

June 2024

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171 Reads

The sandfish Holothuria (Metriatyla) scabra, is a high-value tropical sea cucumber harvested from wild stocks for over four centuries in multi-species fisheries across its Indo-Pacific distribution, for the global bêche-de-mer (BDM) trade. Within Southeast Asia, the Philippines is an important centre of the BDM trade, however overharvesting and largely open fishery management have resulted in declining catch volumes. Sandfish mariculture has been developed to supplement BDM supply and assist restocking efforts; however, it is heavily reliant on wild populations for broodstock supply. Consequently, to inform fishery, mariculture, germplasm and translocation management policies for both wild and captive resources, a high-resolution genomic audit of 16 wild sandfish populations was conducted, employing a proven genotyping-by-sequencing approach for this species (DArTseq). Genomic data (8,266 selectively-neutral and 117 putatively-adaptive SNPs) were used to assess fine-scale genetic structure, diversity, relatedness, population connectivity and local adaptation at both broad (biogeographic region) and local (within-biogeographic region) scales. An independent hydrodynamic particle dispersal model was also used to assess population connectivity. The overall pattern of population differentiation at the country level for H. scabra in the Philippines is complex, with nine genetic stocks and respective management units delineated across 5 biogeographic regions: (1) Celebes Sea, (2) North and (3) South Philippine Seas, (4) South China and Internal Seas and (5) Sulu Sea. Genetic connectivity is highest within proximate marine biogeographic regions (mean F st=0.016), with greater separation evident between geographically distant sites (F st range=0.041–0.045). Signatures of local adaptation were detected among six biogeographic regions, with genetic bottlenecks at 5 sites, particularly within historically heavily-exploited locations in the western and central Philippines. Genetic structure is influenced by geographic distance, larval dispersal capacity, species-specific larval development and settlement attributes, variable ocean current-mediated gene flow, source and sink location geography and habitat heterogeneity across the archipelago. Data reported here will inform accurate and sustainable fishery regulation, conservation of genetic diversity, direct broodstock sourcing for mariculture and guide restocking interventions across the Philippines.




Citations (81)


... Within this context, the need to avoid making untested assumptions that development intervention should focus on specific tools is salient. Inadvertently providing tools suited for taxa not readily accessible or sustainably sourced (Simard et al., 2024) risks undermining the intended livelihood outcomes. The same applies to inadvertently providing tools suited for taxa or products incompatible with tourism. ...

Reference:

Human dimensions in shellcraft: tool ownership differentiates taxa utilised and products produced
Social-ecological Factors, Stock Status, and Governance Relating to a Shellcraft Fishery in the Indo-Pacific Region

Journal of Ethnobiology

... While most coastal communities in the Pacific Islands have access to suitable shells (Simard et al., 2022(Simard et al., , 2023, there exist considerable access and capacity constraints relating to tools Porter et al., 2022). Shellcraft requires specialised tools (Tokerau, 2008;Simard, 2019) and access to these tools is commonly constrained by cost or availability (Teitelbaum and Fale, 2008;Fröcklin et al., 2018;Simard et al., 2019). ...

Consumption of Mollusks and Potential Utilization of Resulting Shell Wastes for Shellcraft within a Pacific Islands Context

Human Ecology

... Global success in commercial operations highlights its potential. Recent research by Hair et al. (2024) showcases community-based mariculture, promoting sustainable practices to foster sea cucumber growth and prevent overexploitation. ...

Future prospects for sea cucumber mariculture in Papua New Guinea and the Pacific Islands
  • Citing Chapter
  • November 2023

... It is also important to note that hatchery practices can also lead to the loss of genetic diversity in H. scabra (Brown et al. 2024). When cultured in the hatchery, the surviving families to juveniles were reportedly low (13-16), indicative of low effective population sizes among offspring. ...

Sandfish generations: Loss of genetic diversity due to hatchery practices in the sea cucumber Holothuria (Metriatyla) scabra
  • Citing Article
  • September 2023

Aquaculture

... Some genera are restricted to the Holarctic, for example, Glossiphonia and Placobdella with the majority of species in the Nearctic, and Torix, which is limited to the eastern Palearctic; Placobdella species are known for parasitizing birds, mammals, amphibians and reptiles. The glossiphoniid genus Haementeria occurs in the Neotropical region and Helobdella has speciated (more than 35 species known) in colder (elevated) regions of South America ; the few species of Helobdella in Australia may all be introductions, including the South American native Helobdella europaea Kutschera, 1987, which has also been introduced to Europe, USA, Taiwan and North Africa (Rashni et al. 2023). Other genera such as Theromyzon have species distributed across all biogeographical regions except for the Australasian region . ...

Leech breach: a first record of the invasive freshwater leech Helobdella europaea (Hirudinea: Glossiphoniidae) in Fiji

Pacific Conservation Biology

... Statistical analyzes were performed with R programming (version: 4.2.1), using the stats (R Core Team, 2022) and mgcv (Wood, 2017) packages, and followed the rationale of Genodepa et al. (2022aGenodepa et al. ( , 2022bGenodepa et al. ( , 2022cGenodepa et al. ( , 2023 for modelling enzyme activities in larval crustaceans. ...

Influence of Moult Cycles on Digestive Enzyme Activities during Early Larval Stages of Panulirus ornatus

... However, we recently identified a number of specimens in museum and private collections, available for study, allowing detailed morphometric examination of this taxon for the first time. Past research on fossil and extant species of Umbilia (Southgate et al. 2021;Southgate and Militz 2023) generated morphometric data relating to shell form (i.e., shell length, shell height, shell width, columellar and labral tooth counts, and relative mass) for each of the recognised subspecies of U. hesitata and U. armeniaca. In the present study, these data were used to support multivariate morphometric comparisons between the Roe Plains U. hesitata-like fossils and extant specimens of U. hesitata and U. armeniaca, at both species and subspecies levels. ...

A multivariate approach to morphological study of shell form in cowries (Gastropoda, Cypraeidae): a case study with Umbilia armeniaca (Verco, 1912)

... It shares the class Cephalopoda with squids, cuttlefishes, and nautiloids. A review by Loganimoce et al. (2023) reported that 23 species of octopus across 11 genera were documented from the Starter pack for octopus monitoring: An overview of octopus biology, ecology and measurement protocols for fisheries management tropical Pacific (Loganimoce et al. 2023). While not all species are important to fisheries, it is worth noting that some of these species are endemic to the region (Norman et al. 2005). ...

Octopuses in the south-west Pacific region: a review of fisheries, ecology, cultural importance and management

Reviews in Fish Biology and Fisheries

... Effective and efficient management strategies are important in optimizing the production output of sandfish juveniles in floating hapa ocean-based nursery systems. Such strategies include biofouling control through routine checking and changing of hapa nets, cleaning the outside surfaces of the hapa nets, size grading, stocking density, and management of predators and competitors (Altamirano and Noran-Baylon 2020; Gorospe, Juinio-Meñez, and Southgate 2021; Gorospe et al. 2023). In this study, the growth performance of sandfish juveniles reared in hapa nets with different numbers of mosquito net layers, and subject to differing cleaning intervals, was not significant by day 30. ...

Census of potential predators and competitors of sandfish, Holothuria scabra, juveniles during floating hapa ocean nursery culture

... Kim et al. (2016) and Nobsathian et al. (2017) demonstrated its antioxidant properties and anti-wrinkle and melanogenesis inhibitory activities. Additionally, Wong et al. (2023) and Han et al. (2012) highlighted H. scabra's potential as an antioxidant, antiglycation agent, and anticancer substance. ...

Holothuria scabra Jaegar 1833 (Sandfish) extracts and collagens modulate protein‐bound N‐carboxymethyllysine, N‐carboxyethyllysine and methylglyoxal‐derived hydroimidazolone‐1 levels