April 2025
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57 Reads
Nature Mental Health
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April 2025
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57 Reads
Nature Mental Health
April 2025
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1 Read
Epidemiology
March 2025
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14 Reads
Scandinavian Journal of Gastroenterology
March 2025
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11 Reads
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1 Citation
JAMA Network Open
Importance Unmeasured confounding is a key concern for decision-makers when observational datasets are used to assemble external control arms (ECAs) for single-arm trials. Objective To investigate the utility of quantitative bias analysis (QBA) for exploring the sensitivity to unmeasured confounding of nonrandomized analyses using ECAs. Design, Setting, and Participants This study emulated 15 treatment comparisons using experimental arms from existing randomized trials in advanced non–small cell lung cancer (aNSCLC) conducted after 2011 and ECAs derived from observational data. Participants were eligible individuals diagnosed with aNSCLC between January 1, 2011, and March 1, 2020. After adjustment for measured baseline confounders, a prespecified QBA was conducted to address potential bias by known unmeasured and mismeasured confounders. The QBA relied on a synthesis of external evidence from a targeted literature search, randomized trial data, and clinician input. Hazard ratios from the original randomized trials were compared with those from their emulation based on ECA analyses. Analyses were completed from February 2022 to October 2023. Exposure Initiation of systemic therapies for aNSCLC. Main outcomes and measures Hazard ratios for all-cause death. Results Sample sizes varied from 52 to 830 depending on the treatment group. The mean difference in the log hazard ratio estimates when using the original control arm vs the ECA for each trial was 0.247 in unadjusted analyses (ratio of hazard ratios, 1.36), 0.139 when adjusted for measured confounders (ratio of hazard ratios, 1.22), and 0.098 when adding external adjustment for unmeasured and mismeasured confounders (ratio of hazard ratios, 1.17). Conclusions and Relevance QBA was feasible and informative in ECA analyses in which residual confounding was expected to be the most important source of bias. These findings encourage further exploration of how QBA can help quantify the impact of bias in other settings and when using other data sources.
February 2025
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19 Reads
AIDS (London, England)
Objective People with HIV-HCV co-infection need antiretroviral treatment (ART) to suppress HIV and direct-acting antivirals (DAAs) to cure HCV. ART is typically prioritized, but delays in DAA initiation may increase the risk of liver-related events and HCV transmission to others. Design Target trial emulation with observational data collected in routine clinical practice from a collaboration of cohorts from Europe and North America. Methods We included DAA-naïve adults with HIV-HCV co-infection who achieved HIV virologic suppression (HIV RNA<50 copies/mL) after starting ART between 2013–2020. We 1) estimated the probability of not initiating DAAs at 6 and 36 months after HIV virologic suppression, and 2) emulated a target trial of early (≤6 months after HIV virological suppression) versus delayed (>6 months) DAA initiation and the 36-month risk of liver-related events (liver decompensation or hepatocellular carcinoma). Results Of 862 eligible individuals (median age 46 years; interquartile range 36 to 56), 14% were women, and 52% had a history of injection drug use. The 6 and 36-month probabilities of not initiating DAA were 58% (95% CI: 55, 61) and 24% (21, 27), respectively. The 36-month risk of liver-related events was 1.1% (0.4, 2.0) for early initiation and 1.7% (0.7, 2.5) for delayed initiation; risk difference -0.5% (-1.2, 0.4). Conclusions Almost one-quarter of people with HIV-HCV co-infection on ART had not initiated DAA 3 years after HIV virologic suppression. Because the 3-year risk of liver-related events was low, estimates of the impact of delayed DAA initiation were imprecise.
February 2025
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85 Reads
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3 Citations
Annals of Internal Medicine
When randomized trials are not available to answer a causal question about the comparative effectiveness or safety of interventions, causal inferences are drawn using observational data. A helpful 2-step framework for causal inference from observational data is 1) specifying the protocol of the hypothetical randomized pragmatic trial that would answer the causal question of interest (the target trial), and 2) using the observational data to attempt to emulate that trial. The target trial framework can improve the quality of observational analyses by preventing some common biases. In this article, we discuss the utility and scope of applications of the framework. We clarify that target trial emulation resolves problems related to incorrect design but not those related to data limitations. We also describe some settings in which adopting this approach is advantageous to generate effect estimates that can close the gaps that randomized trials have not filled. In these settings, the target trial framework helps reduce the ambiguity of causal questions.
January 2025
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118 Reads
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1 Citation
American Journal of Epidemiology
We recently questioned the utility of testing for proportional hazards in survival analysis. Here we expand on why the proportional hazards assumption is both implausible and unnecessary in most medical studies, particularly in randomized trials. We conclude that using survival analysis methods that do not rely on proportional hazards is typically the preferred course of action.
January 2025
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8 Reads
January 2025
November 2024
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7 Reads
Epidemiology
... This study has several limitations • As mentioned above, the absence of a randomized control group and use of external control will raise the possibility of confounding bias. This is a problem common to all intervention studies in rare diseases when randomization is not practically or ethically feasible [13]. • The sample size is small for a Phase 1 study. ...
March 2025
JAMA Network Open
... 16 As such the eligibility criteria must characterise the target population for which inference is ultimately sought, and the ideal trial must also have perfect adherence, and no missing data or measurement error (e.g. the outcome measure must be the gold standard measure that would be used in practice, even in the absence of data mapping to these protocol components). This is different to a recently recommended approach to target trials, 29 but is necessary to systematically assess all potential sources of bias. 16 We operationalized the final step of the road map using a recent simultaneous biasadjustment approach. ...
February 2025
Annals of Internal Medicine
... As Pepe et al. (2004) demonstrated for odds ratios in diagnostic accuracy, a measure of association such as the hazard ratio does not directly capture how well a biomarker can discriminate patients at higher risk of experiencing the event within a given time-horizon. Moreover, the proportional hazards assumption is often violated, making hazard ratios unreliable if applied by default (Stensrud and Hernàn 2025). Relying solely on this approach risks overlooking important time-varying and covariate-specific differences in prognostic accuracy. ...
January 2025
American Journal of Epidemiology
... These issues, and methods that can address selection problems beyond misallocation of person time, are discussed elsewhere. [20] A challenge in applying IMMORTOOL is that study authors often do not provide full data on the timings of the intervention or endpoints. However, readers will often have some idea of the expected distribution of time to death and can test a number of plausible time to intervention distributions. ...
November 2024
Epidemiology
... The National Cancer Screening Programs provided by the National Health Insurance Service (NHIS) include screening for five types of cancer (stomach, colorectum, liver, breast, and uterine cervix) but do not include prostate cancer screening [5]. The NHIS does not provide routine screening for prostate cancer because it is unclear whether prostate-specific antigen (PSA)-based screening can reduce prostate cancer-related or overall mortality and be cost-effective [6,7]. ...
August 2024
JCO Clinical Cancer Informatics
... M adenci et al. 1 used the target trial emulation framework to estimate the causal effect of bariatric surgery on the 7-year risk of cardiovascular disease (CVD). They highlighted the pitfalls in the design and analysis of previous observational studies conducted on this topic, which found overall that bariatric surgery lowers the risk of CVD. ...
July 2024
Epidemiology
... 8,9 Benchmarking can involve anything from formal pre-specified criteria for comparison to informal post hoc deep dives into assessment of the potential impact of design differences, bias, and clinical context. [10][11][12][13] However, prior work on benchmarking and transportability of results between RCTs and database studies has required several assumptions that may be untenable in many practical settings. For example, in addition to the usual assumptions of conditional exchangeability (e.g., no unmeasured confounding) between treatment arms within the RCT and database study, consistency, and positivity, existing benchmarking and transportability methods have required an assumption that trial participation does not have an effect on the outcome other than through treatment. ...
May 2024
European Journal of Epidemiology
... Currently, the treatment of SCZ is primarily based on a multifaceted and comprehensive strategy that aims to alleviate symptoms, enhance patients' quality of life, and reduce relapse rates. Common first-line treatments include first-generation antipsychotics such as chlorpromazine and sulpiride, as well as second-and thirdgeneration medications such as clozapine, risperidone, aripiprazole, and lurasidone, which are less likely to cause extrapyramidal reactions (most common extrapyramidal adverse effects include acute dystonia, akathisia, parkinsonism, and tardive dyskinesia) (Leucht et al., 2023;Szmulewicz et al., 2024). In addition, psychotherapeutic approaches such as cognitive-behavioral therapy and family therapy are also important components of treatment (O'Driscoll et al., 2014;Daruvala et al., 2021). ...
April 2024
American Journal of Epidemiology
... • Gathered data dictionaries and/or other documentation (when available) • Met with data vendors/providers to understand essential information such as data provenance and completeness of fields needed for most research questions (e.g., age) • Compiled key information for each data source and organized data characterization into newly developed standard template ( • Used existing frameworks and templates to: ○ Guide design choices and rationale, and identify minimal criteria for real-world data to meet the needs of the study [14,26,27] ○ Illustrate initial study design and key assessment windows (e.g., baseline, exposure, follow-up) [37] ○ Identify potential confounders (comparative studies only) [28,29] ○ Identify fit-for-purpose data source(s) (i.e., reliable and relevant) to meet the needs of a specific research question [15] ○ For efficiency, in future would use newly published template with combined study design and data fitness assessment steps [34] (Key Lesson #5) Explore selected data source(s) • While carefully avoiding connecting treatments and outcome of inter est (e.g., outcome blinded,) explored data and documented findings to maintain objectivity, but allowed evidence based protocol decisions such as: ○ Completeness and general trends of key variables (e.g., inclusion/ exclusion criteria, subgroups, primary outcome) ○ Considered alternate definitions/time windows for key variables (e.g., confirmed COVID-19 or mortality) ○ Compared general trends of key variables to internal and external benchmarks (as available) to inform final variable definitions and time windows ○ Identified potential threats to validity that warrant analysis considerations, should be further explored via planned sensitivity analyses, and/or should be documented as potential limitations of the data source ○ Data explorations, maintaining blinding, were necessary to yield valid and interpretable study findings. In future, would consider also applying newly published process that incorporates diagnostic steps as a standard part of protocol design [36] (Key Lesson #6) Develop, finalize, and post protocol ...
February 2024
The BMJ
... We know of no relevant framework that would have been appropriate to implement in order to test specific hypotheses within the biomedical community. Further, null hypothesis testing is not appropriate for determining beliefs and when hypothesis testing is used you need a formal sample size calculation [21,22]. ...
January 2024
JAMA The Journal of the American Medical Association