Michael Jeger's research while affiliated with Imperial College London and other places
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Publications (158)
A synoptic review of plant disease epidemics and outbreaks was made using two complementary approaches. The first approach involved reviewing scientific literature published in 2021; the second approach involved retrieving new records added in 2021 to the CABI Distribution Database. The literature review retrieved 186 articles, describing studies i...
Plant diseases caused by viruses share many common features with those caused by other pathogen taxa in terms of the host-pathogen interaction, but there are also distinctive features in epidemiology, most apparent where transmission is by vectors. Consequently, the host-virus-vector-environment interaction presents a continuing challenge in attemp...
The development and use of tolerance have been proposed as an alternative or complementary method to host resistance in the management of plant diseases, including those caused by viruses. There has been much ambiguity among plant pathologists, plant breeders, and agronomists in the meaning of tolerance and how it can be operationally defined, but...
Abstract Following a request of the European Commission, EFSA and ANSES, beneficiary of the EFSA tasking grant on horizon scanning for plant pests (GP/EFSA/ALPHA/2017/02), developed a methodology to order by risk non‐regulated pests recently identified through the monitoring of media and scientific literature. The ranking methodology proposed at th...
Many plant viruses are transmitted by insect vectors. Transmission can be described as persistent or non-persistent depending on rates of acquisition, retention, and inoculation of virus. Much experimental evidence has accumulated indicating vectors can prefer to settle and/or feed on infected versus noninfected host plants. For persistent transmis...
The discipline of plant pathology has an expanding remit requiring a multi-faceted, interdisciplinary approach to capture the complexity of interactions for any given disease, disease complex or syndrome. This review discussed recent developments in plant pathology research and identifies some key issues that, we anticipate, must be faced to meet t...
Many plant viruses are transmitted by insect vectors. Transmission can be described as persistent or non-persistent depending on rates of acquisition, retention, and inoculation of virus. Much experimental evidence has accumulated indicating vectors can prefer to settle and/or feed on infected versus noninfected host plants. For persistent transmis...
Disease in wild plant populations has received less attention from plant pathologists than diseases of managed plants in agriculture, horticulture, and plantation forestry. Plant ecologists, however, have contributed much to an understanding of how pathogens, other plant–microbe interactions, and arthropods affect population structure and community...
Pest risk assessments are required to take phytosanitary measures to protect plant health. In the European Union, the Scientific Panel on Plant Health (PLH) of the European Food Safety Authority was established in 2006 as the reference body for risk assessment in the plant health area. Risk assessments address four steps: introduction, establishmen...
To support the newEuropean Union (EU) Plant Health law, the European Commission (EC) DG SANTE requested EFSA in December 2016 to carry out a horizon scanning exercise in order to identify new plant health threats for the EU. To address this request, EFSA has extended in collaboration with the EC Joint Research Centre (JRC), Ispra, Italy, the monito...
Epidemiology is the science of how disease develops in populations, with applications in human, animal and plant diseases. For plant diseases, epidemiology has developed as a quantitative science with the aims of describing, understanding and predicting epidemics, and intervening to mitigate their consequences in plant populations. Although the cen...
Co-infection of plant hosts by two or more viruses is common in agricultural crops and natural plant communities. A variety of models have been used to investigate the dynamics of co-infection which track only the disease status of infected and co-infected plants, and which do not explicitly track the density of inoculative vectors. Much less atten...
If pathogen species, strains, or clones do not interact, intuition suggests the proportion of coinfected hosts should be the product of the individual prevalences. Independence consequently underpins the wide range of methods for detecting pathogen interactions from cross-sectional survey data. However, the very simplest of epidemiological models c...
Article 42 of the European Regulation (EU) 2016/2031, on the protective measures against pests of plants, introduces the concept of ‘high risk plants, plant products and other objects’ that are identified
on the basis of a preliminary assessment to be followed by a commodity risk assessment. Following a request of the European Commission, this Guid...
EFSA has carried out a public consultation on the draft Guidance of the EFSA Scientific Panel on Plant Health (PLH Panel) on commodity risk assessment for the evaluation of high risk plants dossiers with the aim of collecting input from the scientific community and all interested parties. Article 42 of the European Regulation (EU) 2016/2031, on the...
If pathogen species, strains or clones do not interact, intuition suggests the proportion of co-infected hosts should be the product of the individual prevalences. Independence consequently underpins the wide range of methods for detecting pathogen interactions from cross-sectional survey data. Surprisingly, however, the results of the very simples...
Abstract The Panel on Plant Health performed a pest categorisation of Phymatotrichopsis omnivora, the causal agent of Phymatotrichum root rot of more than 2,000 dicotyledonous plant species, for the EU. The pest is listed as Trechispora brinkmannii in Annex IAI of Directive 2000/29/EC. P. omnivora is a well‐defined fungal species and reliable metho...
Following a request from the European Commission, the EFSA Panel on Plant Health performed a pest categorisation of Cronartium spp. (non-EU), a well-defined and distinguishable group of fungal pathogens of the family Cronartiaceae. There are at least 40 species described within the Cronartium genus, of which two are considered native to the EU (C....
Insect-transmitted plant diseases caused by viruses, phytoplasmas, and bacteria share many features in common regardless of the causal agent. This perspective aims to show how a model framework, developed originally for plant virus diseases, can be modified for the case of diseases incited by Xylella fastidiosa. In particular, the model framework e...
Abstract Following a request from the European Commission, the EFSA Panel on Plant Health performed a pest categorisation of Melampsora farlowii, a well‐defined and distinguishable fungus of the family Melampsoraceae. M. farlowii is the causal agent of a leaf and twig rust of hemlocks (Tsuga spp.) in eastern North America. The pathogen is regulated...
Following a request from the European Commission, the EFSA Panel on Plant Health performed a pest categorisation of Cronartium harknessii, Cronartium kurilense and Cronartium sahoanum, which are well-defined and distinguishable tree fungal pathogens of the family Cronartiaceae. In 2018, these species were moved from the genus Endocronartium to the...
Abstract This Guidance describes a two‐phase approach for a fit‐for‐purpose method for the assessment of plant pest risk in the territory of the EU. Phase one consists of pest categorisation to determine whether the pest has the characteristics of a quarantine pest or those of a regulated non‐quarantine pest for the area of the EU. Phase two consis...
Abstract EFSA was asked for a partial risk assessment of Spodoptera frugiperda for the territory of the EU focussing on the main pathways for entry, factors affecting establishment, risk reduction options and pest management. As a polyphagous pest, five commodity pathways were examined in detail. Aggregating across these and other pathways, we esti...
The Panel on Plant Health performed a pest categorisation of Xiphinema americanum sensu lato (Nematoda: Longidoridae) for the EU. Sixty-one species in this group are recognised. They are polyphagous pests found in soil associated with a number of plant species. As a migratory ectoparasitic species, it punctures cells of plant roots. Nematodes were...
Following a request from the European Commission, the EFSA Plant Health Panel performed a pest categorisation of Pantoea stewartii subsp. stewartii (hereafter P. s. subsp. stewartii). P. s. subsp. stewartii is a Gram-negative bacterium that causes Stewart's vascular wilt and leaf blight of sweet corn and maize, a disease responsible for serious cro...
Following a request from the European Commission, the EFSA Plant Health Panel performed a pest categorisation of Lopholeucaspis japonica (Hemiptera: Diaspididae), an armoured scale which preferentially feeds on smooth barked woody trees and shrubs. The pest occurs in Asia, North America and non-EU Europe (Caucasus region and Ukraine). The pest is r...
Following a request from the European Commission, the EFSA Plant Health Panel performed a pest categorisation of Melampsora medusae, a well-defined and distinguishable fungal species of the family Melampsoraceae. The pathogen is regulated in Annex IAI of Council Directive 2000/29/EC as a harmful organism whose introduction into the EU is banned. M....
The European Food Safety Authority has produced this Guidance on human and animal health aspects (Part 1) of the risk assessment of nanoscience and nanotechnology applications in the food and feed chain. It covers the application areas within EFSA's remit, e.g. novel foods, food contact materials, food/feed additives and pesticides. The Guidance ta...
The Panel on Plant Health performed a pest categorisation of the fungus Synchytrium endobioticum, the causal agent of potato wart disease, for the European Union (EU). The identity of the pest is well established and reliable methods exist for its detection and identification. S. endobioticum is present in most continents. The pest is listed in Ann...
Following a request from the European Commission, the EFSA Panel on Plant Health performed a pest categorisation of Chrysomyxa arctostaphyli, a well-defined and distinguishable fungal species of the family Coleosporiaceae. The pathogen is regulated in Council Directive 2000/29/EC (Annex IAI) as a harmful organism whose introduction into the EU is b...
Following a request from the European Commission, the EFSA Plant Health Panel updated its pest categorisation of Xylella fastidiosa, previously delivered as part of the pest risk assessment published in 2015. X. fastidiosa is a Gram-negative bacterium, responsible for various plant diseases, including Pierce's disease, phony peach disease, citrus v...
Following a request from the European Commission, the EFSA Panel on Plant Health performed a pest categorisation of Coniferiporia sulphurascens and Coniferiporia weirii, two well-defined and distinguishable fungal species of the family Hymenochaetaceae. The pathogens are regulated in Council Directive 2000/29/EC (Annex IAI, under the previous name...
Following a request from the European Commission, the EFSA Panel on Plant Health performed a pest categorisation of Guignardia laricina, a well-defined and distinguishable fungal species of the family Phyllostictaceae. The pathogen is regulated in Council Directive 2000/29/EC (Annex IAI) as a harmful organism whose introduction into the EU is banne...
The Panel on Plant Health performed a pest categorisation of the non-EU Pissodes spp. (Coleoptera: Curculionidae). They constitute a well-defined taxon, with non-EU species distributed in the USA, Canada, Mexico, Guatemala, El Salvador, China, Japan, Korea, Russia and South Africa, some of which are recognised as severe pests of conifers, mainly Pi...
The Panel on Plant Health performed a pest categorisation of Colletotrichum gossypii, the fungal agent of anthracnose and ramulosis diseases of cotton, for the EU. The identity of the pest is well established and reliable methods exist for its detection/identification. The pest is present in most of the cotton-growing areas worldwide, including Bul...
The Panel on Plant Health performed a pest categorisation of Grapholita packardi Zeller, (Lepidoptera: Tortricidae), for the EU. G. packardi is a well-defined and distinguishable species. It is widely distributed in the USA and has a restricted distribution in Canada and Mexico. It is recognised as a pest of blueberry and cherry, and has occasional...
The Panel on Plant Health performed a pest categorisation of nematodes belonging to the genus Hirschmanniella (Nematoda: Pratylenchidae). Twenty-nine species in this genus have been considered of which five species are present in the EU (Hirschmanniella behningi, Hirschmanniella gracilis, Hirschmanniella halophila, Hirschmanniella loofi and Hirschm...
The Panel on Plant Health performed a pest categorisation of the Siberian moth, Dendrolimus sibiricus Tschetverikov (Lepidoptera: Lasiocampidae). D. sibiricus is a well-defined and distinguishable species, native to Asian Russia and northern regions of Kazakhstan, Mongolia, China and North Korea, and recognised as a severe pest of Pinaceae conifers...
Following a request from the European Commission, the EFSA Panel on Plant Health performed a pest categorisation of the seed-borne bacterium Curtobacterium flaccumfaciens pv. flaccumfaciens. The pest is regulated in Council Directive 2000/29/EC (Annex IIB) as a harmful organism whose introduction into, and spread within, the protected zones (PZ) of...
The EFSA Panel on Plant Health performed a pest categorisation of 'Blight and blight-like' for the EU territory. Blight is a major disease of citrus. Similar 'blight-like' diseases are also known (e.g. declinio, declinamiento) and are addressed simultaneously with Blight in the present categorisation. The causal agent(s) remain(s) unknown and the p...
Following a request from the European Commission, the EFSA Panel on Plant Health (PLH) performed a pest categorisation of Mycodiella laricis-leptolepidis, a well-defined and distinguishable fungal species of the family Mycosphaerellaceae. The former species name Mycosphaerella laricis-leptolepis is used in the Council Directive 2000/29/EC. The path...
The Panel on Plant Health performed a pest categorisation of the weevil Anthonomus quadrigibbus Say, (Coleoptera: Curculionidae), for the EU. A. quadrigibbus is a well-defined and distinguishable species, recognised as an occasional pest of apples, pears and sour cherries in North America where it also feeds on a range of wild rosaceous plants such...
The Panel on Plant Health performed a pest categorisation of Nacobbus aberrans (Nematoda: Pratylenchidae), the false root-knot nematode, for the EU. The nematode was originally described from the American continent. Due to differences in host range as well as molecular variability among populations, N. aberrans should be regarded as a species compl...
Following a request from the European Commission, the EFSA Plant Health Panel performed a pest categorisation of Sphaerulina musiva, a well-defined and distinguishable fungal species of the family Mycosphaerellaceae. Following a recent phylogenetic analysis of the genus Septoria and other closely related genera, a new name (S. musiva) was introduce...
The Panel on Plant Health performed a pest categorisation of the fungus Apiosporina morbosa, the causal agent of black knot, for the EU. The identity of the pest is well established and reliable methods exist for its detection/identification. The pest is listed in Annex IIAI of Directive 2000/29/EC and is not known to occur in the EU. Apiosporina m...
The Panel on Plant Health performed a pest categorisation of the citrus thrips, Scirtothrips citri (Moulton) (Thysanoptera: Thripidae), for the European Union (EU). This is a well-defined and distinguishable species, occurring in North America and Asia. Its precise distribution in Asia is uncertain. S. citri is a pest of citrus and blueberries and...
The Panel on Plant Health performed a pest categorisation of the citrus snow scale, Unaspis citri (Comstock) (Hemiptera: Diaspididae), for the European Union (EU). This is a well-defined and distinguishable species, native to south-eastern Asia, which has spread to many tropical and subtropical regions. U. citri can be a pest of citrus and has been...
The Panel on Plant Health performed a pest categorisation of the South African citrus thrips, Scirtothrips aurantii Faure (Thysanoptera: Thripidae), for the European Union (EU). This is a well-defined and distinguishable species, recognised as a pest of citrus and mangoes in South Africa, which has been cited on more than 70 different plants, inclu...
The Panel on Plant Health performed a pest categorisation of the soil-borne fungus Fusarium oxysporum f. sp. albedinis, the causal agent of Fusarium wilt of date palm, for the EU. The identity of the pest is well established and reliable methods exist for its detection/identification. The pest is listed in Annex IIAI of Directive 2000/29/EC and is...
Following a request from the European Commission, the EFSA Plant Health (PLH) Panel performed a pest categorisation of Bretziella fagacearum, a well-defined and distinguishable fungal species of the family Ceratocystidaceae. The species was moved from the genus Ceratocystis to a new genus Bretziella following phylogenetic analysis of the species an...
Abstract Following a request from the European Commission, the EFSA Plant Health (PLH) Panel performed a pest categorisation of Anisogramma anomala, a well‐defined and distinguishable fungal species of the family Valsaceae. The pathogen is regulated in Annex IIAI of Council Directive 2000/29/EC as a harmful organism whose introduction into the EU i...
The Panel on Plant Health performed a pest categorisation of the gall midge Aschistonyx eppoi Inouye () (Diptera, Cecidomyiidae), for the EU. A. eppoi is a well-defined and distinguishable species, native to Japan and Korea, and recognised as a pest of Juniperus chinensis, although our knowledge is solely based on one unique publication. A. eppoi i...
Abstract To meet the general requirement for transparency in EFSA's work, all its scientific assessments must consider uncertainty. Assessments must say clearly and unambiguously what sources of uncertainty have been identified and what is their impact on the assessment conclusion. This applies to all EFSA's areas, all types of scientific assessmen...
Uncertainty analysis is the process of identifying limitations in scientific knowledge and evaluating their implications for scientific conclusions. It is therefore relevant in all EFSA's scientific assessments and also necessary, to ensure that the assessment conclusions provide reliable information for decision-making. The form and extent of unce...
Abstract The Plant Health Panel reviewed the paper by Guarnaccia et al. () and compared their findings with previous predictions on the establishment of Phyllosticta citricarpa. Four species of Phyllosticta were found by Guarnaccia et al. () in Europe. P. citricarpa and P. capitalensis are well‐defined species, with P. citricarpa recorded for the f...
Abstract The Panel on Plant health performed a pest categorisation of the Australian Eucalyptus snout‐beetle Gonipterus scutellatus (Coleoptera: Curculionidae), for the EU. G. scutellatus should be referred as the G. scutellatus species complex because it includes several cryptic species. A complete nomenclature of the species present in the EU is...
The EFSA Panel on Plant Health performed a pest categorisation for Xanthomonas oryzae pathovars oryzae (Xoo) and oryzicola (Xoc), the causal agents of the bacterial blight and the bacterial leaf streak of rice, respectively. These pathovars are widely distributed in Asia, Africa and Australia. Xoo is also reported in some states of the USA and in s...
Abstract The Panel on Plant Health performed a pest categorisation of Tecia solanivora (Lepidoptera: Gelechiidae) the Guatemalan potato tuber moth, for the EU. T. solanivora is a well‐defined species which feeds exclusively on Solanum tuberosum. It was first described from Costa Rica in 1973 and has spread through Central America and into northern...
Abstract The European Commission requested EFSA to conduct a pest categorisation of Toxoptera citricida (Hemiptera: Aphididae), an oligophagous aphid developing and reproducing parthenogenetically on tender leaf and flower flush of citrus (Rutaceae). T. citricida is a taxonomic entity with reliable methods available for detection and identification...
The Panel on Plant Health performed a pest categorisation of Listronotus bonariensis (Coleoptera: Curculionidae), the Argentine stem weevil, for the EU. L. bonariensis is a well-defined species, recognised as a serious pest of pasture grasses, especially Lolium spp. and Poa annua, in New Zealand, and a rare pest of cereals in Argentina, Brazil and...
In recent years, mathematical modeling has increasingly been used to complement experimental and observational studies of biological phenomena across different levels of organization. In this article, we consider the contribution of mathematical models developed using a wide range of techniques and uses to the study of plant virus disease epidemics...
Abstract The EFSA Panel on Plant Health performed a pest categorisation of the Citrus leprosis viruses for the EU territory and identified five distinct viruses, Citrus leprosis virus C (CiLV‐C), Citrus leprosis virus C2 (CiLV‐C2), Hibiscus green spot virus 2 (HGSV‐2), the Citrus strain of Orchid fleck virus (OFV) and Citrus leprosis virus N sensu...
Abstract The Panel on Plant Health performed a pest categorisation of the Diprionid sawfly, Gilpinia hercyniae Hartig (Hymenoptera: Diprionidae), for the EU. G. hercyniae is a well‐defined and distinguishable species, native to Europe but also present in North America, Japan, Mongolia, Korea and Pakistan, and recognised as a pest of spruce (Picea s...
Abstract The European Commission requested EFSA to conduct a pest categorisation of Anthonomus grandis (Coleoptera: Curculionidae), an oligophagous pest weevil feeding on Malvaceae, including Gossypium spp., Hampea spp., Cienfuegosia spp. and Hibiscus pernambucensis. Marginal reproduction has also been observed on the ornamental Hibiscus syriacus....
