Michael A. Schafroth's research while affiliated with The Scripps Research Institute and other places
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Publications (42)
Most human proteins lack chemical probes, and several large-scale and generalizable small-molecule binding assays have been introduced to address this problem. How compounds discovered in such binding-first assays affect protein function, nonetheless, often remains unclear. Here, we describe a function-first proteomic strategy that uses size exclus...
Hypertension and kidney disease have been repeatedly associated with genomic variants and alterations of lysine metabolism. Here, we combined stable isotope labeling with untargeted metabolomics to investigate lysine’s metabolic fate in vivo. Dietary 13C6 labeled lysine was tracked to lysine metabolites across various organs. Globally, lysine react...
LPCAT3 is an integral membrane acyltransferase in the Lands cycle responsible for generating C20:4 phospholipids and has been implicated in key biological processes such as intestinal lipid absorption, lipoprotein assembly, and ferroptosis. Small-molecule inhibitors of LPCAT3 have not yet been described and would offer complementary tools to geneti...
The lack of tools to observe drug-target interactions at cellular resolution in intact tissue has been a major barrier to understanding in vivo drug actions. Here, we develop clearing-assisted tissue click chemistry (CATCH) to optically image covalent drug targets in intact mammalian tissues. CATCH permits specific and robust in situ fluorescence i...
The cis-stereoisomers of Δ⁹-THC [(−)-3 and (+)-3] were identified and quantified in a series of low-THC-containing varieties of Cannabis sativa registered in Europe as fiber hemp and in research accessions of cannabis. While Δ⁹-cis-THC (3) occurs in cannabis fiber hemp in the concentration range of (−)-Δ⁹-trans-THC [(−)-1], it was undetectable in a...
As a serine hydrolase, monoacylglycerol lipase (MAGL) is pricinpally responsible for the metabolism of 2-arachidonoylglycerol (2-AG) in the central nervous system (CNS), leading to the formation of arachidonic acid (AA). Dysfunction of MAGL has been associated with multiple CNS disorders and symptoms, including neuroinflammation, cognitive impairme...
Ligand-induced protein degradation has emerged as a compelling approach to promote the targeted elimination of proteins from cells by directing these proteins to the ubiquitin-proteasome machinery. So far, only a limited number of E3 ligases have been found to support ligand-induced protein degradation, reflecting a dearth of E3-binding compounds f...
The endocannabinoid system (ECS) is involved in a wide range of biological functions and comprises cannabinoid receptors and enzymes responsible for endocannabinoid synthesis and degradation. Over the past 2 decades, significant advances toward developing drugs and positron emission tomography (PET) tracers targeting different components of the ECS...
Hypertension and kidney disease, two related, common, and severe disease entities, have been repeatedly associated with genomic variants and metabolic alterations of lysine metabolism. Here, we developed a stable isotope labeling strategy compatible with untargeted metabolomics acquisition to investigate the physiology and molecular spectrum of lys...
Electrophilic compounds originating from nature or chemical synthesis have profound effects on immune cells. These compounds are thought to act by cysteine modification to alter the functions of immune-relevant proteins; however, our understanding of electrophile-sensitive cysteines in the human immune proteome remains limited. Here, we present a g...
Phytochemical studies on the liverwort Radula genus have previously identified the bibenzyl (−)- cis -perrottetinene ( cis -PET), which structurally resembles (−)-Δ ⁹ - trans -tetrahydrocannabinol (Δ ⁹ - trans -THC) from Cannabis sativa L. Radula preparations are sold as cannabinoid-like legal high on the internet, even though pharmacological data...
Cellular responses depend on the interactions of extracellular ligands, such as nutrients, growth factors, or drugs, with specific cell-surface receptors. The sensitivity of these interactions to non-physiological conditions, however, makes them challenging to study using in vitro assays. Here we present HATRIC-based ligand receptor capture (HATRIC...
The cannabinoid receptor 1 (CB1) is an inhibitory G protein-coupled receptor abundantly expressed in the central nerv-ous system. It has rich pharmacology and largely accounts for the recreational use of cannabis. We describe efficient asymmetric syntheses of four photoswitchable Δ⁹-tetrahydrocannabinol derivatives (azo-THCs) from a central buildin...
A method for the enantioselective synthesis of carbo- and heterocyclic ring systems enabled through the combination of Lewis acid activation and iridium-catalyzed allylic substitution is described. The reaction proceeds with branched, allylic alcohols and carbon nucleophiles as well as heteronucleophiles to give a diverse set of ring systems in goo...
The changing legal landscape including medicinal and recreational consumption of Cannabis sativa has led to renewed interest to study the chemistry and biology of cannabinoids. The chemistry in this chapter highlights approaches to cannabinoid total synthesis with an emphasis on the implementation of modern methods and tactics, which provide access...
All four stereoisomers of Δ‐tetrahydrocannabinol (Δ‐THC) were synthesized in concise fashion using stereodivergent dual catalysis. Thus, following identical synthetic sequences and applying identical reaction conditions to the same set of starting materials, selective access to the four stereoisomers of THC was achieved in five steps. GermanKein Is...
The synthetic value of this protocol is demonstrated by enantioselective preparation of the antidepressant paroxetine (XII).
A novel bioconjugation strategy is presented that relies on the coupling of diazonium terephthalates with amines in proteins. The diazonium captures the amine while the vicinal ester locks it through cyclization, ensuring no reversibility. The reaction is highly efficient and proceeds under mild conditions and short reaction times. Densely function...
We describe fully stereodivergent, dual catalytic α-allylation of linear aldehydes. The reaction proceeds via direct iridium-catalyzed substitution of racemic allylic alcohols with enamines generated in-situ. The use of an Ir(P,olefin) complex and a diarylsilyl prolinol ether as catalysts in the presence of dimethylhydrogen phosphate as promoter pr...
The presented dual-catalytic synthesis discloses an access to γ,δ-unsaturated aldehydes with two vicinal, asymmetric carbon atoms.
Independent Chiral Catalysts
Synthetic catalysts can be prepared in their mirror-image form and thereby furnish the mirror-image (enantiomer) of the reaction product. In practice, however, this versatility is largely limited to products featuring a single stereocenter that accounts for the dissymmetry. Krautwald et al. (p. 1065 ; see the Perspectiv...
A highly enantioselective polycyclization method has been developed using the combination of Lewis acid activation with iridium-catalyzed allylic substitution. This strategy relies on direct use of branched, racemic allylic alcohols and furnishes a diverse and unique set of carbo- and heteropolycyclic ring systems in good yields and ≥ 99% ee.
Citations
... Lysine is not involved in the synthesis of toxins, but is diuretic and promotes the elimination of toxins (Rubin et al., 1960). In addition, studies have shown that lysine administration provides renal protection in salt-sensitive hypertension (Rolleman et al., 2008;Rinschen et al., 2022). Thus, the significantly increased abundance of lysine degradation in the gut flora also contributes to worsening subsequent CKD. ...
... These results pointed to a broad acyl chain remodeling outcome associated with TMEM164 deletion that is reminiscent of the reshuffling of acyl chains in diacyl PLs that accompanies the genetic or pharmacological disruption of the C20:4-preferring acyltransferases LPCAT3 or MBOAT7 (refs. [20][21][22]. One difference in the remodeling profile caused by TMEM164 disruption, however, was the very minor increase in C22:4 ePEs (Fig. 1g,h and Supplementary Dataset 1), which contrasted with the more marked elevation in C22:4 PEs found in LPCAT3-null cells 21,22 . ...
... These initial data show that probe labelling can be visualized in intact living cells, which we expect will enable both spatially and temporally resolved activity maps of more selective drug-like compounds in intact tissues in the future. Notably, visualization of covalent drug-target interactions with cellular resolution in intact brain tissue has only recently achieved (Pang et al., 2022) using a number of alkynylated CNS drug analogs that had previously been advanced by classical ABPP approachesamong them a covalent MAOI that operates by a slightly different mechanism from that of PHZ. ...
... Copper-induced nucleophilic 18 F labeling, which was developed by Gouverneur's (Tredwell et al., 2014;Taylor et al., 2017) and Scott's group (Chu and Qing, 2014), is another strategy for radiofluorination of a non-active aromatic ring. There is easy access to the precursor BPE via Miyaura boration (Ishiyama et al., 1995), which would be complementary to SCIDY synthesis (Rong et al., 2021). Because of this, we also systemically evaluated BPE radiolabeling feasibility in our FX2N module. ...
... This justifies why THC (and other molecules with partial or full agonistic activity on CB1, including the weak psychoactive D9-cis-THC enantiomer, recently demonstrated to occur naturally in Hemp-derived nutraceuticals, both phytocannabinoids and non-cannabinoids, with potential effects on the gastrointestinal tract and the brain-gut axis. (Schafroth et al., 2021), should be absent (or at low, non-psychotropic levels) in hemp-derived food products, as a minimum health safety requirement. With antagonistic or negative allosteric activity on CB1 receptors as an outstanding feature, the pharmacology of CBD is very complex (summarized in Table 5) and underlies its broad biological activities, including neuroprotection, analgesia, antiinflammatory and immune-modulating effects, anxiolytic, spasmolytic, anticonvulsant and antipsychotic effects, mood stabilization, and normalization of sleep disorders, just to name a few (Kicman and Toczek, 2020;Mlost et al., 2020;Britch et al., 2021;Franco et al., 2021;Vitale et al., 2021). ...
... This framework might be more clinically relevant, as the assessment of pathological personality traits may be more predictive of interpersonal problems that contribute to the individual seeking treatment (Fowler et al., 2015), and one neurotransmitter system alone is unlikely to explain all the symptoms of BPD or ASPD. In terms of advancing ECS research into personality disorders, Chen et al. (2021) recently developed a PET radiotracer for MAGL mapping. ...
... It shows a good safety profile 17 and can be considered a close analogue of the marketed kinase inhibitor sunitinib (4, Fig. 1a). DCAF11 has only been targeted by chloroacetamide derivatives before, which were considered valuable tool compounds for cellular investigations 18 , and the discovery of degraders incorporating more tempered electrophiles, such as -unsaturated amides was deemed highly desirable. The drug-like, natural-product inspired arylidene indolinones define a new DCAF11-ligand class with balanced electrophilic reactivity that may enable the wider exploration of this E3-ligase in chemical biology and medicinal chemistry programs. ...
... Several structural scaffolds of CB 2 R PET tracers have recently been developed [51][52][53][54][55] including pyridine derivatives, oxoquinoline derivatives, thiazole derivatives [56,57], oxadiazole derivatives [58], carbazole derivatives [59], imidazole derivative [60], and thiophene derivatives [61,62]. In this study, our newly developed pyridine derivative [ 18 F]RoSMA-18-d6 (Fig. 3b), which exhibited sub-nanomolar affinity and high selectivity towards CB 2 R (Ki: 0.8 nM, CB 2 R/CB 1 R > 12′000) [63], was selected for CB 2 R-targeted neuroinflammation imaging. ...
... platforms vary in the choice of enrichment handle, for example either iodoacetamide alkyne (IAA), iodoacetamide desthiobiotin (IA-DTB) 22,25 , or more tailored labeling reagents, such as hypervalent iodine probes [50][51][52] and heteroaromatic azoline thioethers (HATs) 53 . Isotopic labeling strategies have emerged as another area of considerable innovation for cysteine chemoproteomics. ...
... 13−15 Positron emission tomography (PET), as a non-invasive imaging technique, can support drug discovery and development by providing valuable information on drug−target engagement, accessing target occupancy, and monitoring treatment. 16 Early developed MAGL radioligands are mainly irreversible ones such as [ 11 C]MA-PB-1, 17 [ 11 C]SAR127303, 18 [ 11 C]PF-06809247, 19 and [ 18 F]PF-06795071 20 (Figure 1). However, irreversible PET tracers could hardly provide comprehensive quantification of the drug−target interaction. ...