Matteo Detto’s research while affiliated with Princeton University and other places

What is this page?


This page lists works of an author who doesn't have a ResearchGate profile or hasn't added the works to their profile yet. It is automatically generated from public (personal) data to further our legitimate goal of comprehensive and accurate scientific recordkeeping. If you are this author and want this page removed, please let us know.

Publications (82)


A perfect tradeoff emerges from competition dynamics
a The relationship between break-even time and height growth in a metacommunity of species that vary randomly in the fraction of net plant productivity allocated to reproduction (φ\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${{\rm{\varphi }}}$$\end{document}) and the allometric parameter regulating crown size (a)\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$(a)$$\end{document} to biomass (b=ϕacc+1\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$b={{\rm{\phi }}}{a}^{\frac{c}{c+1}}$$\end{document}), shown in the inset. The species that will potentially coexist in the forest patch mosaic constitute the left-upper envelope of the scatterplot and represent the fastest height growth for a given break-even time (red circles). The inset shows the relationship among the physiological traits f\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$f$$\end{document} and ϕ\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${{\rm{\phi }}}$$\end{document}. b Height as a function of age for the potential coexisting species in (a). Note that the trajectories never cross.
Lifetime reproductive success, LRS, is the number of offspring that survive disturbances and are produced by an individual with full access to light until age t
At ri\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${r}_{i}$$\end{document}, the individual of species-i\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$i$$\end{document} has produced enough seeds during his life that, on average, one will turn into a mature tree (i.e., LRS=1\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${LRS}=1$$\end{document}). In our model, LRS\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${LRS}$$\end{document} is equal to t/rc+1\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${\left(t/r\right)}^{c+1}$$\end{document}, where and c\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$c$$\end{document} is an allometric constant shared by all species, which depends on the scaling exponent between tree mass and crown area (fixed at 1.5). The niche shadow is the interval that cannot be invaded by shorter competitors and ends at the time (ti\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${t}_{i}$$\end{document}) species-i\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$i$$\end{document} starts being overtopped by taller competitors. The safety distance represents how far break-even time is from the niche shadow of the taller competitor (ti−1\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${t}_{i-1}$$\end{document}).
A graphical method to explain coexistence of multiple species
a Numerical simulation of the dynamic system shows that the four coexisting species (black lines) persist while the two go extinct (gray lines). b Graphical method to determine which species from the metacommunity stably coexist in the forest mosaic. Each black curve represents a species-specific LRS\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${LRS}$$\end{document}. A competitively excluded species (light gray) cannot persist either because: (1) it has a break-even time (light gray dot) that is greater than t0\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${t}_{0}$$\end{document}, which means that its expected LRS\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${LRS}$$\end{document} is less than one, even without any competitors present, or (2) it cannot reach its break-even time (gray dot) before a taller species has already closed the canopy over it (at the vertical red line immediately to the left of the gray dot).
Effect of CNDD on successional diversity and recruitment
a Analytical results (lines, Eq. (6)) of successional diversity, as a function of CNDD parameter β\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${{\rm{\beta }}}$$\end{document} for different metacommunity size JM\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${J}_{M}$$\end{document}. b The expected density of recruits as a function of break-even time declines with CNDD. This decline is stronger for late-successional species. Near r=1\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$r=1$$\end{document} recruits drop to zero because the break-even time is too close to the disturbance interval. Other parameters JM=100\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${J}_{M}=100$$\end{document}, c=1.5\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$c=1.5$$\end{document}, and f/m=1\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${{\rm{f}}}/{{\rm{m}}}=1$$\end{document}.
A graphical method explains the role of CNDD in reducing competitive exclusion and generating diversity
a Without CNDD the species represented by the gray line is excluded because its break-even time (gray dot) is greater than ti\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${t}_{i}$$\end{document} With CNDD, εi<ξi\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${{{\rm{\varepsilon }}}}_{i} < {{{\rm{\xi }}}}_{i}$$\end{document} and ti\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${t}_{i}$$\end{document} shits to t′i\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${t^{\prime} }_{i}$$\end{document} (blue line), allowing coexistence. b Simulations show that without CNDD ε≈ξ\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${{\rm{\varepsilon }}}\approx {{\rm{\xi }}}$$\end{document} (red); with CNDD ε<ξ\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${{\rm{\varepsilon }}} \, < \, {{\rm{\xi }}}$$\end{document}. Dashed lines represent Eq. (5) with ri=1/2\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${r}_{i}=1/2$$\end{document} and c=1.5\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$c=1.5$$\end{document}.

+2

Integrating conspecifics negative density dependence, successional and evolutionary dynamics: Towards a theory of forest diversity
  • Article
  • Full-text available

November 2024

·

23 Reads

Communications Biology

Matteo Detto

·

Stephen Pacala

Tree successional diversity is evident even to casual observers and has a well-understood physiological basis. Various life history trade-offs, driven by interspecific variation in a single trait, help maintain this diversity. Conspecific negative density dependence (CNDD) is also well-documented and reduces tree vital rates independently of succession strategies. The CNDD hypothesis is frequently justified by specialist natural enemies at a separate trophic level. We integrate these processes into an analytical demographic model, spanning short-term plant physiological responses to the dynamics of a large forest mosaic connected to a metacommunity. Surprisingly, multiple trade-offs do not necessarily increase diversity, as suboptimal trait combinations lead to strategies that cannot compete for successional niches, explaining the weak correlation between functional traits and succession position. Succession alone can sustain half of the species in the metacommunity, with diversity increasing linearly with CNDD strength. The steeper increase with larger metacommunities suggests CNDD plays a greater role in tropical forests. However, if each successional type contains multiple equivalent species, CNDD maintains diversity but becomes less effective in promoting successional diversity, consistent with some tropical forests being less successional diverse. Additionally, CNDD enhances the likelihood of successful speciation and shifts life-history trait frequency by affecting more late-successional species.

Download

Performance evaluation of UKESM1 for surface ozone across the pan-tropics

November 2024

·

46 Reads

Flossie Brown

·

·

·

[...]

·

Alfonso Zambrano

Surface ozone monitoring sites in the tropics are limited, despite the risk that surface ozone poses to human health, tropical forest and crop productivity. Atmospheric chemistry models allow us to assess ozone exposure in unmonitored locations and evaluate the potential influence of changing policies and climate on air quality, human health and ecosystem integrity. Here, we utilise in situ ozone measurements from ground-based stations in the pan-tropics to evaluate ozone from the UK Earth system model, UKESM1, with a focus on remote sites. The study includes ozone data from areas with limited previous data, notably tropical South America, central Africa and tropical northern Australia. Evaluating UKESM1 against observations beginning in 1987 onwards, we show that UKESM1 is able to capture changes in surface ozone concentration at different temporal resolutions, albeit with a systematic high bias of 18.1 nmolmol-1 on average. We use the diurnal ozone range (DOR) as a metric for evaluation and find that UKESM1 captures the observed DOR (mean bias of 2.7 nmolmol-1 and RMSE of 7.1 nmolmol-1) and the trend in DOR with location and season. Results from this study reveal that hourly ozone concentrations from UKESM1 require bias correction before use for impact assessments based on human and ecosystem health. Indeed, hourly surface ozone data have been crucial to this study, and we encourage other modelling groups to include hourly surface ozone output as a default.


Up‐scaling stabilizing CDD from individuals to populations to communities to metacommunities. Ways in which stabilizing/destabilizing CDD in individual demographic performance (e.g., the relationship between survival, growth, etc. and conspecific relative to heterospecific density) might scale up to influence stabilizing/destabilizing CDD in population growth rates and community and metacommunity dynamics. Examples of stabilizing, destabilizing, or neutral CDD are given at individual, population, and community scales. Emergent metacommunity properties might be influenced by stabilizing CDD, and hypothesized effects of stabilizing CDD on metacommunities are provided. Because of scale‐transition and the influence of larger scale processes, stabilizing CDD measured at the individual level may or may not translate into stabilizing CDD at higher levels of ecological organization (See Section 4).
Consequences of Local Conspecific Density Effects for Plant Diversity and Community Dynamics

Ecology Letters

Conspecific density dependence (CDD) in plant populations is widespread, most likely caused by local‐scale biotic interactions, and has potentially important implications for biodiversity, community composition, and ecosystem processes. However, progress in this important area of ecology has been hindered by differing viewpoints on CDD across subfields in ecology, lack of synthesis across CDD‐related frameworks, and misunderstandings about how empirical measurements of local CDD fit within the context of broader ecological theories on community assembly and diversity maintenance. Here, we propose a conceptual synthesis of local‐scale CDD and its causes, including species‐specific antagonistic and mutualistic interactions. First, we compare and clarify different uses of CDD and related concepts across subfields within ecology. We suggest the use of local stabilizing/destabilizing CDD to refer to the scenario where local conspecific density effects are more negative/positive than heterospecific effects. Second, we discuss different mechanisms for local stabilizing and destabilizing CDD, how those mechanisms are interrelated, and how they cut across several fields of study within ecology. Third, we place local stabilizing/destabilizing CDD within the context of broader ecological theories and discuss implications and challenges related to scaling up the effects of local CDD on populations, communities, and metacommunities. The ultimate goal of this synthesis is to provide a conceptual roadmap for researchers studying local CDD and its implications for population and community dynamics.


Linking physiology, epidemiology, and demography: Understanding how lianas outcompete trees in a changing world

August 2024

·

109 Reads

·

2 Citations

Proceedings of the National Academy of Sciences

Extending and safeguarding tropical forest ecosystems is critical for combating climate change and biodiversity loss. One of its constituents, lianas, is spreading and increasing in abundance on a global scale. This is particularly concerning as lianas negatively impact forests’ carbon fluxes, dynamics, and overall resilience, potentially exacerbating both crises. While possibly linked to climate-change-induced atmospheric CO 2 elevation and drought intensification, the reasons behind their increasing abundance remain elusive. Prior research shows distinct physiological differences between lianas and trees, but it is unclear whether these differences confer a demographic advantage to lianas with climate change. Guided by extensive datasets collected in Panamanian tropical forests, we developed a tractable model integrating physiology, demography, and epidemiology. Our findings suggest that CO 2 fertilization, a climate change factor promoting forest productivity, gives lianas a demographic advantage. Conversely, factors such as extreme drought generally cause a decrease in liana prevalence. Such a decline in liana prevalence is expected from a physiological point of view because lianas have drought-sensitive traits. However, our analysis underscores the importance of not exclusively relying on physiological processes, as interactions with demographic mechanisms (i.e., the forest structure) can contrast these expectations, causing an increase in lianas with drought. Similarly, our results emphasize that identical physiological responses between lianas and trees still lead to liana increase. Even if lianas exhibit collinear but weaker responses in their performance compared to trees, a temporary liana prevalence increase might manifest driven by the faster response time of lianas imposed by their distinct life-history strategies than trees.


Calibrating Tropical Forest Coexistence in Ecosystem Demography Models Using Multi‐Objective Optimization Through Population‐Based Parallel Surrogate Search

August 2024

·

62 Reads

·

1 Citation

Tropical forest diversity governs forest structures, compositions, and influences the ecosystem response to environmental changes. Better representation of forest diversity in ecosystem demography (ED) models within Earth system models is thus necessary to accurately capture and predict how tropical forests affect Earth system dynamics subject to climate changes. However, achieving forest coexistence in ED models is challenging due to their computational expense and limited understanding of the mechanisms governing forest functional diversity. This study applies the advanced Multi‐Objective Population‐based Parallel Local Surrogate‐assisted search (MOPLS) optimization algorithm to simultaneously calibrate ecosystem fluxes and coexistence of two physiologically distinct tropical forest species in a size‐ and age‐structured ED model with realistic representation of wood harvest. MOPLS exhibits satisfactory model performance, capturing hydrological and biogeochemical dynamics observed in Barro Colorado Island, Panama, and robustly achieving coexistence for the two representative forest species. This demonstrates its effectiveness in calibrating tropical forest coexistence. The optimal solution is applied to investigate the recovery trajectories of forest biomass after various intensities of clear‐cut deforestation. We find that a 20% selective logging can take approximately 40 years for aboveground biomass to return to the initial level. This is due to the slow recovery rate of late successional trees, which only increases by 4% over the 40‐year period. This study lays the foundation to calibrate coexistence in ED models. MOPLS can be an effective tool to help better represent tropical forest diversity in Earth system models and inform forest management practices.



The Ecosystem as Super-organ/Ism, Revisited: Scaling Hydraulics to Forests under Climate Change

June 2024

·

90 Reads

·

1 Citation

Integrative and Comparative Biology

Synopsis Classic debates in community ecology focused on the complexities of considering an ecosystem as a super-organ or organism. New consideration of such perspectives could clarify mechanisms underlying the dynamics of forest carbon dioxide (CO2) uptake and water vapor loss, important for predicting and managing the future of Earth’s ecosystems and climate system. Here, we provide a rubric for considering ecosystem traits as aggregated, systemic, or emergent, i.e., representing the ecosystem as an aggregate of its individuals or as a metaphorical or literal super-organ or organism. We review recent approaches to scaling-up plant water relations (hydraulics) concepts developed for organs and organisms to enable and interpret measurements at ecosystem-level. We focus on three community-scale versions of water relations traits that have potential to provide mechanistic insight into climate change responses of forest CO2 and H2O gas exchange and productivity: leaf water potential (Ψcanopy), pressure volume curves (eco-PV), and hydraulic conductance (Keco). These analyses can reveal additional ecosystem-scale parameters analogous to those typically quantified for leaves or plants (e.g., wilting point and hydraulic vulnerability) that may act as thresholds in forest responses to drought, including growth cessation, mortality, and flammability. We unite these concepts in a novel framework to predict Ψcanopy and its approaching of critical thresholds during drought, using measurements of Keco and eco-PV curves. We thus delineate how the extension of water relations concepts from organ- and organism-scales can reveal the hydraulic constraints on the interaction of vegetation and climate and provide new mechanistic understanding and prediction of forest water use and productivity.



Five sites (a) in Canada's boreal forest biome (shaded green) where black spruce (Picea mariana) and tamarack (Larix laricina) were sampled for tree water deficit: Old Black Spruce (OBS), Scotty Creek (SCC), Baker Creek (BAC), Smith Creek (SMC) and Havikpak Creek (HPC). Half‐hourly measurements of species‐averaged tree water deficit (TWD) in black spruce (b) and tamarack (c), and potential environmental controls at Old Black Spruce in 2020. Environmental controls include evapotranspiration (ET, d), photosynthetically active radiation (PAR, e), vapor pressure deficit (VPD, f), air temperature (Tair, g), rain (h), and soil moisture (θ, h). Weekly average TWD, ET, PAR, VPD and Tair are represented with gray lines (b–g). Breaks in the soil moisture data represent data that was periodically unavailable. The blue shading across panels represent large periodic rainfall events.
Wavelet coherence levels (0–1) between potential environmental controls and tree water deficit of black spruce and tamarack at Old Black Spruce (OBS), Scotty Creek (SCC), and Baker Creek (BAC), and black spruce at OBS, SCC, BAC, Smith Creek (SMC) and Havikpak Creek (HPC). Sites are listed from south (bottom) to north (top). Potential environmental controls include evapotranspiration, photosynthetically active radiation (PAR), vapor pressure deficit (VPD), air temperature, rain and soil moisture. Circles with dark shading indicate significant (α = 0.05) coherence between tree water deficit and environmental condition.
Across‐site Granger‐causality (G‐causality) between black spruce and tamarack tree water deficit (TWD) and evapotranspiration (ET; a and g), photosynthetically active radiation (PAR; b and h), vapor pressure deficit (VPD; c and i), air temperature (Tair d and j), rain (e and k) and soil moisture (θ, f and l) at the daily and multi‐day (1.3–14 days) periods. The first boxplot in each panel represents the G‐causality of environmental variables on TWD (e.g., ET → TWD). The second boxplot in each panel represents the G‐causality of TWD on environmental variables (e.g., TWD → ET). Individual points represent the causal effect of environmental controls on black spruce (circles) and tamarack (triangle) TWD or of the causal effect of TWD on environmental controls at each site. Dashed lines indicate the significance threshold (α = 0.05). Environmental controls have a causal effect when the G‐causality of the environmental control on tree water deficit is higher than the G‐causality of tree water deficit on the environmental control (and vice versa).
Radiation, Air Temperature, and Soil Water Availability Drive Tree Water Deficit Across Temporal Scales in Canada's Western Boreal Forest

April 2024

·

161 Reads

Changes are projected for the boreal biome with complex and variable effects on forest vegetation including drought‐induced tree mortality and forest loss. With soil and atmospheric conditions governing drought intensity, specific drivers of trees water stress can be difficult to disentangle across temporal scales. We used wavelet analysis and causality detection to identify potential environmental controls (evapotranspiration, soil moisture, rainfall, vapor pressure deficit, air temperature and photosynthetically active radiation) on daily tree water deficit and on longer periods of tree dehydration in black spruce and tamarack. Daily tree water deficit was controlled by photosynthetically active radiation, vapor pressure deficit, and air temperature, causing greater stand evapotranspiration. Prolonged periods of tree water deficit (multi‐day) were regulated by photosynthetically active radiation and soil moisture. We provide empirical evidence that continued warming and drying will cause short‐term increases in black spruce and tamarack transpiration, but greater drought stress with reduced soil water availability.


(a) Mean (crosses) and uncertainty (as per Lasslop et al. (2008); error bars) of measured NEE at weekly intervals. (b) Simulated soil respiration. The default simulation (red) uses the Jordan (1991) parameterisation of snow thermal conductivity, and blue colours represent simulations using the Sturm et al. (1997) parameterisation of snow thermal conductivity. Darker blue colours represent less-negative Ψmin values and paler blue colours represent more-negative values of Ψmin. Shaded areas in panel (b) represent the range of respiration fluxes for simulations using the Sturm et al. (1997) snow thermal conductivity and the same Ψmin but with different values of Q10 (1.5, 2.5, 5.0, 7.5). (c) Observed (black) and simulated (purple) snow depths. (d) 10 cm soil temperatures, both observed (black) and simulated using both the default Jordan (1991; red) and Sturm et al. (1997; blue) snow thermal conductivity parameterisations.
Cumulative net ecosystem exchange (NEE) for the simulated snow cover duration of (a) 2016–17 (227 d), (b) 2017–18 (231 d), and (c) 2018–19 (242 d) from the ensemble of simulations. Blue colours represent simulations using the snow thermal conductivity parameterisation of Sturm et al. (1997), with darker colours for less-negative Ψmin. The shaded areas represent the range of Q10 (1.5–7.5) for each Ψmin. The dark red line represents the default CLM snow thermal conductivity parameterisation of Jordan (1991).
Contour plots showing the relative influence of Ψmin and Q10 on the simulations of mean soil respiration for all three snow-covered non-growing seasons using the snow thermal conductivity parameterisations of (a) Jordan (1991) and (b) Sturm et al. (1997). The difference between the two snow thermal conductivity parameterisations is shown in (c)).
Evaluation of the impact of Ψmin and Q10 parameterisations on simulated net ecosystem exchange (NEE) during freeze-up (a, d, and g), midwinter (b, e, and h), and thaw (c, f, and i) periods of each snow-covered season for simulations using the Sturm et al. (1997) snow thermal conductivity parameterisation. The number of weekly averages included in each panel are denoted by n values.
Cumulative net ecosystem exchange (NEE) for winter 2017–18. The black crosses show cumulative weekly measured NEE, with error bars representing measurement uncertainty as per Lasslop et al. (2008). The grey area from late November to late January denotes the period when no NEE observations are available. Across this section, an average value for the 6 weeks before and after the gap is used to estimate cumulative NEE. Curves show the simulated cumulative NEE, with blue colours representing simulations using the snow thermal conductivity parameterisation of Sturm et al. (1997), with darker colours for less-negative Ψmin. The shaded areas for these curves represent the range of Q10 (1.5–7.5) for each Ψmin. The dark red line represents the default CLM snow thermal conductivity parameterisation of Jordan (1991).
Simulating net ecosystem exchange under seasonal snow cover at an Arctic tundra site

February 2024

·

68 Reads

·

1 Citation

Estimates of winter (snow-covered non-growing season) CO2 fluxes across the Arctic region vary by a factor of 3.5, with considerable variation between measured and simulated fluxes. Measurements of snow properties, soil temperatures, and net ecosystem exchange (NEE) at Trail Valley Creek, NWT, Canada, allowed for the evaluation of simulated winter NEE in a tundra environment with the Community Land Model (CLM5.0). Default CLM5.0 parameterisations did not adequately simulate winter NEE in this tundra environment, with near-zero NEE (< 0.01 gCm-2d-1) simulated between November and mid-May. In contrast, measured NEE was broadly positive (indicating net CO2 release) from snow-cover onset until late April. Changes to the parameterisation of snow thermal conductivity, required to correct for a cold soil temperature bias, reduced the duration for which no NEE was simulated. Parameter sensitivity analysis revealed the critical role of the minimum soil moisture threshold of decomposition (Ψmin) in regulating winter soil respiration. The default value of this parameter (Ψmin) was too high, preventing simulation of soil respiration for the vast majority of the snow-covered season. In addition, the default rate of change of soil respiration with temperature (Q10) was too low, further contributing to poor model performance during winter. As Ψmin and Q10 had opposing effects on the magnitude of simulated winter soil respiration, larger negative values of Ψmin and larger positive values of Q10 are required to simulate wintertime NEE more adequately.


Citations (62)


... Since our model does not track individuals in the understory, we selected trees based on their canopy access by calculating the fraction of each tree's crown area with direct light exposure. We assumed the crowns to be perfect circles centered at the stem location, with crown radius and height estimated from site-specific allometric equations 42,60 . This approach allowed us to determine the extent to which each tree's crown area is not overlapped by a taller neighboring tree. ...

Reference:

Integrating conspecifics negative density dependence, successional and evolutionary dynamics: Towards a theory of forest diversity
Linking physiology, epidemiology, and demography: Understanding how lianas outcompete trees in a changing world
  • Citing Article
  • August 2024

Proceedings of the National Academy of Sciences

... There are many ML methods appropriate for emulating the LSM response to parameter modifications. When it comes to the calibration problem specifically, an alternative to emulating the LSM output is to directly emulate the cost function itself (i.e., the response surface of model error as a function of parameter value) which is much lower dimensional and often much smoother that the model output itself (Cheng et al., 2023(Cheng et al., , 2024Dagon et al., 2020;Fer et al., 2018; . ...

Calibrating Tropical Forest Coexistence in Ecosystem Demography Models Using Multi‐Objective Optimization Through Population‐Based Parallel Surrogate Search

... The ability to seamlessly combine global satellite observations with in-situ measurements and biological modeling is key to understanding and predicting the impacts of global change on ecosystems. Satellite remote sensing provides large-scale observations, but it typically focuses on entire forest canopies rather than the fundamental units of biology, such as organisms (Wood et al., 2024). With increases in computational capacity and spatio-temporal resolution (i.e. ...

The Ecosystem as Super-organ/Ism, Revisited: Scaling Hydraulics to Forests under Climate Change
  • Citing Article
  • June 2024

Integrative and Comparative Biology

... High-temporal-resolution products (e.g., Moderate-Resolution Imaging Spectrometer (MODIS) and Medium-Resolution Imaging Spectrometer (MERIS) products) are generally too coarse (from 250 m to a few kilometers) to capture tropical ecosystem heterogeneity [20]. Moreover, owing to their long revisit time (16 days), medium-spatial-resolution products (e.g., Landsat products with a 30 m spatial resolution) potentially lack observations at critical phenological stages [21]. ...

Scale matters: Spatial resolution impacts tropical leaf phenology characterized by multi-source satellite remote sensing with an ecological-constrained deep learning model
  • Citing Article
  • February 2024

Remote Sensing of Environment

... Wetlands are known CH 4 sources with high global warming potential (IPCC, 2021). However, flooded paddy soils (Conrad, 2007), Arctic wetlands (Voigt et al., 2023), and mire-wetlands , known as CH 4 emitters, act as CH 4 sinks during dry periods. Multiple interacting factors control the atmospheric CH 4 concentrations in wetlands (Maucieri et al., 2017). ...

Arctic soil methane sink increases with drier conditions and higher ecosystem respiration

Nature Climate Change

... Havikpak Creek is a subarctic woodland on undulating, hummocky terrain mostly formed by moderately well-drained glacial till and overlain by silty clay and a thin organic layer (Eaton et al., 2001). The vegetation at HPC comprises scattered, stunted, mostly mature (>70 years old) black spruce (Picea mariana) trees with a mean canopy height of 2.4 m (Qu et al., 2023). Havipak Creek is predominantly covered by forest (>50%) followed by alder shrubs, short grass, moss, and lichen. ...

A boreal forest model benchmarking dataset for North America: a case study with the Canadian Land Surface Scheme Including Biogeochemical Cycles (CLASSIC)

... Situated in tropical and subtropical intertidal zones, mangroves are physiologically subject to several environmental stresses such as those related to radiation, temperature, drought, inundation, and nutrients, making them susceptible to climate change (Alongi 2009(Alongi , 2022. Among these, drought stresses from high salinity and atmospheric dryness have been often found to adversely affect mangrove growth or even exacerbate mangrove loss (Guan et al 2015, Simard et al 2019, Mafi-Gholami et al 2020, Lagomasino et al 2021, Perri et al 2023, Cortés et al 2024. Despite the abundance of water in the intertidal zones, mangroves are instead often experiencing a physiological drought (Das et al 2016). ...

Salinity‐induced limits to mangrove canopy height

Global Ecology and Biogeography

... Whilst a growing body of evidence suggests that plants thermoregulate, such that leaf temperatures and air temperatures often differ, the relationship between leaf and air temperatures that characterises the extent and pattern of thermoregulation is a matter of current debate (see for instance : Michaletz et al., 2016;Drake et al., 2020;Still et al., 2022Still et al., , 2023Doughty et al., 2023;Garen et al., 2023;Guo et al., 2023). For example, it has been posited that in the face of fluctuating environmental temperatures, many plants maintain relatively stable tissue temperatures, with findings from diverse climates across the globe at the leaf scale indicating that thermoregulation is commonplace, and is typically intermediate to true poikilothermy and true homeothermy (i.e. ...

Reply to Garen et al.: Within-canopy temperature data also do not support limited homeothermy

Proceedings of the National Academy of Sciences

... New Phytologist certain range of toxicity, because excessive Mn inhibits NADmalic enzyme activity (Takagi et al., 2021) or alters stomatal and leaf anatomical development, causing stomatal dysfunction, and thus inhibit the activities of both C anabolism and catabolism (Li et al., 2010). Collectively, all of the examined eight leaf traits jointly contribute to 30% of cross-site R dark25 variability, which still leaves a large proportion of unexplained R dark25 variance, which might be associated with many other unconsidered factors, such as temperature acclimation, drought, leaf ontogeny, phylogeny, and leaf metabolic traits and metabolic status (Atkin & Macherel, 2009;Atkin, 2011;Reich et al., 2016;O'Leary et al., 2017;Yan et al., 2023). Further studies are thereby needed to reveal the mechanisms underlying the R dark25 variability across forest types with the integration of more relevant abiotic and biotic sources. ...

Global patterns and drivers of leaf photosynthetic capacity: The relative importance of environmental factors and evolutionary history
  • Citing Article
  • March 2023

Global Ecology and Biogeography

... With today's richness of EO data and advancements in ML models, there is a lot of hope to synergize ML-EObased model imputed with ground observations to improve the accuracy to estimate phenological developments of crops (Kooistra et al. 2023). Although various studies explored the potential of ML models to predict phenology (Czernecki et al. 2018;Wang et al. 2023;Worrall et al. 2023;Xin et al. 2020;Yang et al. 2023b), these studies are often limited to specific crops or phenological stages, limiting their applicability to a broader range of agricultural scenarios (Lobert et al. 2023;Tedesco et al. 2021). ...

An ecologically-constrained deep learning model for tropical leaf phenology monitoring using PlanetScope satellites
  • Citing Article
  • March 2023

Remote Sensing of Environment