Marcelo R. de Carvalho’s research while affiliated with The National Museum of Natural Sciences and other places

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Publications (137)


Family Dasyatidae. Stingrays
  • Chapter

September 2022

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68 Reads

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4 Citations

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Marcelo R de Carvalho

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Hugo RS Santos

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Evidence-Based Taxonomy: Labels as Illocutionary Acts
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  • Full-text available

August 2022

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660 Reads

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6 Citations

Taxonomy

Concepts in science have an important role: They delimit and specify objects, activities, processes, and abstract entities. When terms are diffuse, mean different things to different persons, and lead more to qualifications than demarcation, they cease to be concepts and may become labels, which are informal alternative designations. There are many labels in science and they have become abundant in taxonomy: α-taxonomy, integrative-taxonomy, iterative-taxonomy, etc., are only a few examples. α-taxonomy is a negative label that obtained popularity at the same time the term α-diversity became popular in ecology. The label α-taxonomy conveys a negative meaning to taxonomy because the nature of its evidence—originally morphological—is seen by many as “merely descriptive” and, thereby, supposedly inferior to other forms of evidence. This has contributed to substantial and unwarranted damage to the status of this science and to the careers of taxonomists. The recent history of methodologies for species delimitation shows that what some have considered of low value (morphology), compared to “new” data (molecular), is in many cases the critical factor to delimit species. We propose to eschew these kinds of labels and simply refer to taxonomy to avoid stigmatizing of any kind of practicing taxonomist, whether focused on morphology, cytology, molecular biology, or other fields of biology. Taxonomy implies the use of the current best evidence, theories, and methods to demarcate species and their relationships.

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Figura 1. Scolex de Potamotrygonocestus orinocensis. Fonte: Brooks et al. (1981).
Figura 2. Potamotrygonocotyle tsalickisi. Fonte: Mayes et al. (1981b).
Figura 3. Vista ventral de Paravitellotrema overstreeti. Fonte: Brooks et al. (1979).
Parasitas de raias de água doce (Potamotrygonidae): estado atual do conhecimento e lista de espécies

April 2021

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519 Reads

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2 Citations


Phylogenetic significance of clasper morphology of electric rays (Chondrichthyes: Batoidea: Torpediniformes)

December 2020

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81 Reads

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6 Citations

Journal of Morphology

Torpediniformes (electric rays) is a monophyletic group strongly supported by morphological and molecular phylogenetic studies. The claspers of electric rays, however, are poorly documented in comparation to the clasper of other batoids, especially skates, and the knowledge of their anatomical variation is restricted to the description of a few species. The present paper analyzes the external and skeletal clasper anatomy of electric rays and reports newly discovered characters that can be useful for taxonomic diagnoses and higher‐level systematic studies. The family Torpedinidae exclusively presents the integumental flap, a poorly calcified clasper skeleton, and a dorsal marginal cartilage with a medial flange on its distal portion. Derived or diagnostic characters were not found in the clasper of the reportedly non‐monophyletic families Narcinidae and Narkidae; however, the claspers of species and genera of narcinids and narkids present different anatomical patterns that can be useful for taxonomic and phylogenetic studies.


Corrigenda: Phylogenetic relationship of catshark species of the genus Scyliorhinus (Chondrichthyes, Carcharhiniformes, Scyliorhinidae) based on comparative morphology. Zoosystematics and Evolution 96(2): 345–395. https://doi.org/10.3897/zse.96.52420

September 2020

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93 Reads

The genus Scyliorhinus is part of the family Scyliorhinidae, the most diverse family of sharks and of the subfamily Scyliorhininae along with Cephaloscyllium and Poroderma . This study reviews the phylogenetic relationships of species of Scyliorhinus in the subfamily Scyliorhininae. Specimens of all Scyliorhinus species were examined as well as specimens of four of the 18 species of Cephaloscyllium , two species of Poroderma , representatives of almost all other catshark (scyliorhinid) genera and one proscylliid ( Proscyllium haberer i). A detailed morphological study, including external and internal morphology, morphometry and meristic data, was performed. From this study, a total of 84 morphological characters were compiled into a data matrix. Parsimony analysis was employed to generate hypotheses of phylogenetic relationships using the TNT 1.1. Proscyllium habereri was used to root the cladogram. The phylogenetic analysis, based on implied weighting (k = 3; 300 replications and 100 trees saved per replication), resulted in three equally most parsimonious cladograms with 233 steps, with a CI of 0.37 and an RI of 0.69. The monophyly of the subfamily Scyliorhininae is supported as well as of the genus Scyliorhinus , which is proposed to be the sister group of Cephaloscyllium . The phylogenetic relationships amongst Scyliorhinus species are presented for the frst time.


Phylogenetic relationship of catshark species of the genus Scyliorhinus (Chondrichthyes, Carcharhiniformes, Scyliorhinidae) based on comparative morphology

June 2020

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1,173 Reads

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17 Citations

The genus Scyliorhinus is part of the family Scyliorhinidae, the most diverse family of sharks and of the subfamily Scyliorhininae along with Cephaloscyllium and Poroderma. This study reviews the phylogenetic relationships of species of Scyliorhinus in the subfamily Scyliorhininae. Specimens of all Scyliorhinus species were examined as well as specimens of four of the 18 species of Cephaloscyllium, two species of Poroderma, representatives of almost all other catshark (scyliorhinid) genera and one proscylliid (Proscyllium habereri). A detailed morphological study, including external and internal morphology, morphometry and meristic data, was performed. From this study, a total of 84 morphological characters were compiled into a data matrix. Parsimony analysis was employed to generate hypotheses of phylogenetic relationships using the TNT 1.1. Proscyllium habereri was used to root the clado-gram. The phylogenetic analysis, based on implied weighting (k = 3; 300 replications and 100 trees saved per replication), resulted in three equally most parsimonious cladograms with 233 steps, with a CI of 0.37 and an RI of 0.69. The monophyly of the subfamily Scyliorhininae is supported as well as of the genus Scyliorhinus, which is proposed to be the sister group of Cephaloscyllium. The phylogenetic relationships amongst Scyliorhinus species are presented for the first time.


Squalus shiraii sp. nov. (Squaliformes, Squalidae), a new species of dogfish shark from Japan with regional nominal species revisited.

June 2020

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676 Reads

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3 Citations

A new species of deep-water dogfish shark, Squalus shiraii sp. nov., is described herein as endemic to the tropical waters off Southern Japan. This species has been largely misidentified with S. mitsukurii. However, morphological, meristic and morphometric evidence support it to be a separate and undescribed species. Squalus shiraii sp. nov. differs from this species by having body brown in colour dorsally, caudal fin with ventral and dorsal tips markedly tapered and broadly white, dermal denticles uniscuspidate and lanceolate and larger number of precaudal (91-94) and total vertebrae (120-123) (vs. body dark grey to black; caudal fin with ventral and dorsal tips rounded and not white in colour; denticles tricuspidate and rhomboid; 86-90 precaudal and 116-117 total vertebrae). Squalus shiraii sp. nov. is also clearly separated from other Japanese congeners which are herein revisited to include six species, based on the examination of over 150 specimens caught from Japanese waters that were available in ichthyological collections: S. mitsukurii, S. japonicus, S. acutirostris, S. brevirostris and S. suckleyi. Squalus mitsukurii, S. japonicus and S. brevirostris are re-described in detail and the neotype of S. japonicus is herein designated. Squalus acutirostris is treated as a valid species with occurrences in Japan, China and Taiwan and, thus, a provisional diagnosis is given, as well as an updated diagnosis of S. suckleyi. A key to Squalus species from the Northwestern Pacific Ocean is given and main morphological differences between S. shiraii sp. nov. and the closest related species are discussed.


Squalus shiraii sp. nov. (Squaliformes, Squalidae), a new species of dogfish shark from Japan with regional nominal species revisited

June 2020

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506 Reads

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4 Citations

A new species of deep-water dogfish shark, Squalus shiraii sp. nov., is described herein as endemic to the tropical waters off Southern Japan. This species has been largely misidentified with S. mitsukurii. However, morphological, meristic and morphometric evidence support it to be a separate and undescribed species. Squalus shiraii sp. nov. differs from this species by having body brown in colour dorsally, caudal fin with ventral and dorsal tips markedly tapered and broadly white, dermal denticles uniscuspidate and lanceolate and larger number of precaudal (91-94) and total vertebrae (120-123) (vs. body dark grey to black; caudal fin with ventral and dorsal tips rounded and not white in colour; denticles tricuspidate and rhomboid; 86-90 precaudal and 116-117 total vertebrae). Squalus shiraii sp. nov. is also clearly separated from other Japanese congeners which are herein revisited to include six species, based on the examination of over 150 specimens caught from Japanese waters that were available in ichthyological collections: S. mitsukurii, S. japonicus, S. acutirostris, S. brevirostris and S. suckleyi. Squalus mitsukurii, S. japonicus and S. brevirostris are re-described in detail and the neotype of S. japonicus is herein designated. Squalus acutirostris is treated as a valid species with occurrences in Japan, China and Taiwan and, thus, a provisional diagnosis is given, as well as an updated diagnosis of S. suckleyi. A key to Squalus species from the Northwestern Pacific Ocean is given and main morphological differences between S. shiraii sp. nov. and the closest related species are discussed.


Distribution of the lateral line canals on dorsal (D) and ventral (V) in Potamotrygon albimaculata (a), P. jabuti (b), and P. schroederi (c). BS branchial slits, E eye, HYO hyomandibular canal, IO infraorbital canal, M mouth, MAN mandibular canal, NS nasal canal, PLL posterior lateral line canal, S spiracle, SO supraorbital canal, VS vesicles of Savi, squares connection of the hyomandibular canal, triangles connection of the infraorbital canal. Disc width: P. albimaculata, 28.5 cm; P. jabuti, 27.5 cm; and P. schroederi, 20.2 cm
Orbito-nasal component in Potamotrygon motoro (a), connecting infraorbital (IO), hyomandibular (HYO), nasal (NS) and supraorbital (SO) canals. Arrows are indicating connections of cupulae of neuromasts between nasal and infraorbital canals in Heliotrygon sp. (b), Plesiotrygon iwamae (c), Potamotrygon spp. (comprising P. albimaculata, P. jabuti, P. motoro, P. orbignyi and P. wallacei) (d), and Potamotrygon schroederi (e). Medial-orbital component (f) of Paratrygon aiereba shows the connection between neuromasts of supraorbital and infraorbital canals (g)
Neuromast distribution and its relevance to feeding in Neotropical freshwater stingrays (Elasmobranchii: Potamotrygonidae)

March 2020

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152 Reads

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9 Citations

Zoomorphology

The mechanosensory system in batoids has a unique sensory canal distribution located on both dorsal and ventral surfaces of the body. Due to the opposite position of eyes and mouth, ventral lateral-line canals are essential to detect and capture prey buried in the substrate. The present study analyzes the density of neuromasts in ventral lateral-line canals as well as their specific distribution patterns to help to understand the mechanisms involved in the foraging activities in potamotrygonid stingrays. The organization of the lateral-line canals was described in Potamotrygon albimaculata, P. jabuti and P. schroederi. Neuromasts were quantified in each canal of the ventral surface and endemic their densities were compared among P. albimaculata, P. jabuti, P. schroederi, P. wallacei, and Paratrygon aiereba. The orbito-nasal component of the infraorbital canal was examined for all genera of Potamotrygoninae to understand its origin and connection patterns. Despite similarities in the morphology of the lateral line in the examined potamotrygonid species, differences of the densities of neuromasts were observed. The distinct web-like infraorbital canal in Paratrygon aiereba held a significantly higher number of neuromasts, which apparently compensates the lower density of neuromasts along its ventral surface. The orbito-nasal component of the infraorbital canal presents connections between infraorbital and nasal canals, except for P. aiereba, which has a supra-infraorbital canals’ connection. The complex distribution of lateral line canals and their neuromasts indicate distinct sensory abilities that probably provide a high capability to detect a variety of prey in different types of substrate.



Citations (55)


... tropical Indo-West Pacific; South Africa to eastern Australia, northward to southern Japan (Manjaji, 2004;Last et al., 2016b;Manjaji-Matsumoto et al., 2022). The species has been recorded in the Mediterranean Sea, being considered an invasive species that entered through the Suez Canal (Yucel et al., 2017;Bariche et al., 2020;Saad et al., 2021). ...

Reference:

Record of the Leopard Whipray Himantura leoparda (Chondrichthyes: Myliobatiformes) from Kadogawa Bay, northern Miyazaki Prefecture, Japan
Family Dasyatidae. Stingrays
  • Citing Chapter
  • September 2022

... The first time the term 'taxonomy' was used to refer to the classification of objects can be found in De Candolle [2]. Over the years that followed, the method was developed and applied to the classification of various research objects [2][3][4][5][6][7][8]. ...

Evidence-Based Taxonomy: Labels as Illocutionary Acts

Taxonomy

... Characters of the claspers (e.g., number of intermediate elements; number of terminal cartilages) are cladistically analyzed herein for the first time and should be taken into account in future phylogenetic analysis within Squaliformes. Descriptive anatomy of the claspers has been provided to discuss the interrelationships in sharks and batoids as seen in [68,69] and more recently [70,71]. [27,47] treated clasper morphology within Squaliformes but since then no additional examination has been conducted, except for general species descriptions such as for Isistius in [35,52]. ...

Phylogenetic significance of clasper morphology of electric rays (Chondrichthyes: Batoidea: Torpediniformes)
  • Citing Article
  • December 2020

Journal of Morphology

... Orientation and terminology of a hypothetical shark vertebral centra including the most common features, adapted fromApplegate (1967),Welton & Farish (1993),Burris (2004) andMoreira et al. (2019). A, left lateral view of a shark vertebral column showing a series of vertebral centra and associated cartilages of neural and hemal arches; B, transversal view of a cross sectioned hypothetical anterior caudal vertebra, showing the terminology; C, ventraloblique view of a in; D, sagittal cut of a vertebral centrum. ...

Systematic implications of the caudal fin skeletal anatomy in ground sharks, order Carcharhiniformes (Chondrichthyes: Elasmobranchii)
  • Citing Article
  • January 2019

Zoological Journal of the Linnean Society

... The neurocranium is one of the main sources of morphological characters and has contributed to enlightening our knowledge on the interrelationships among elasmobranchs (e.g., Compagno 1977Compagno , 1988Shirai 1992Shirai , 1996Soares and de Carvalho 2020;Soares and Mathubara 2022;Villalobos-Segura et al. 2022;Soares et al. 2023). For this reason, rays, to minimize damage to the neurocranium morphology and enable its viability for other studies. ...

Phylogenetic relationship of catshark species of the genus Scyliorhinus (Chondrichthyes, Carcharhiniformes, Scyliorhinidae) based on comparative morphology

... The Japanese Shortnose Spurdog is demersal on the continental shelf and slope at depths of 40-342 m (Weigmann 2016, Viana andde Carvalho 2020). It reaches a maximum size of 57.8 cm total length (TL), males mature at ~40 cm TL and females mature at ~36 cm TL (Viana and de Carvalho 2020). ...

Squalus shiraii sp. nov. (Squaliformes, Squalidae), a new species of dogfish shark from Japan with regional nominal species revisited.

... The haplotype network revealed that S. japonicus, S. edmundsi, and S. grahami did not share haplotypes, unlike S. clarkae and S. mitsukurii, which did. Squalus mitsukurii was originally described in Japan by Jordan and Snyder (1903), and despite identification issues due to morphological character overlapping, this species presents a circumglobal distribution [69], and its occurrence has likely been overestimated [4,70,71]. ...

Squalus shiraii sp. nov. (Squaliformes, Squalidae), a new species of dogfish shark from Japan with regional nominal species revisited

... Elasmobranchs use a complex arrangement of sensory systems (gustation, electro and mechanosensorial organs, vision and olfaction) which act jointly to locate prey, potential predators and the presence of conspecifics (McComb the prey. Shibuya et al. (2010;2020) stand that the distribution of lateral line canals and the high density of neuromasts around the mouth in freshwater stingrays are related to detect the prey, which most of them are formed by benthic species or commonly live buried in the substrate (e.g. Duncan et al. 2016;Shibuya 2022). ...

Neuromast distribution and its relevance to feeding in Neotropical freshwater stingrays (Elasmobranchii: Potamotrygonidae)

Zoomorphology

... This synonymization was maintained until 2019, when Soares and De Carvalho examined the genus Scyliorhinus in more detail. During their investigations it was revealed that S. duhamelii has many significantly different morphological characteristics compared to S. canicula and it was reassessed as a distinct species (Soares and De Carvalho, 2019) [3] . This increased the number of valid Scyliorhinus species in European waters to three. ...

The catshark genus Scyliorhinus (Chondrichthyes: Carcharhiniformes: Scyliorhinidae): taxonomy, morphology and distribution

Zootaxa

... In spite of the lack of compelling molecular data, there is morphological support for the interrelationships reported by Naylor et al. [3][4][5] for the Squatiniformes and Pristiophoriformes, e.g., by Shirai [9] based mainly on skeletal and myological features. Nevertheless, Weigmann et al. [10] and Moreira and Carvalho [11] pointed out that, despite sharing many characteristics, the claspers of Squatiniformes and Pristiophoriformes are strikingly different. Weigmann et al. [10] proposed that the differences in clasper morphology between angel sharks and saw sharks could be interpreted as autapomorphic while the similarity in body shape and morphology of the first basiventral cartilages constitutes evidence of an interrelationship. ...

Clasper Morphology of the Japanese Sawshark, Pristiophorus japonicus Günther, 1870 (Chondrichthyes: Elasmobranchii)