Manshi Yang’s research while affiliated with Jilin University and other places

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Publications (6)


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Microbiota-directed clinical trials

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Combination strategies of gut microbiota in cancer therapy through metabolic reprogramming and immune remodeling
  • Literature Review
  • Full-text available

June 2025

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13 Reads

Cell Communication and Signaling

Lixuan Wang

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Weibo Jiang

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Manshi Yang

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[...]

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Mengying Cui

Over the past decade, there has been a qualitative improvement in the understanding of gut microbiota in cancer development and treatment. Gut microbiota regulates metabolic reprogramming that occurs in the competition between tumor cells and immune cells for essential nutrients in the tumor microenvironment (TME). Besides, gut microbiota dysbiosis is one of the key factors leading to the formation of aging environment, which has many similarities with the TME. Accumulating research findings have demonstrated that gut microbiota enhances the efficacy of cancer therapies by activating the immune system and facilitating the biotransformation of drugs. Other studies also have shown that specific microbial composition is the effective biomarker of drug resistance and toxicity for cancer treatment. Microbiota-directed therapies are being explored intensively for their potential in cancer prevention and treatment. In this review, we summarize the role of gut microbiota in metabolic reprogramming and immune remodeling; provide an overview of the relationship between gut microbiota and the efficacy, resistance, and toxicity of cancer treatment; propose a series of strategies to integrate gut microbiota into cancer treatment, optimizing antitumor effectiveness and reducing side effects.

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Fig. 1 Establishment of immunosuppressive microenvironment. Immunosuppressive networks pro-tumor cells formation in the TME. Immunosuppressive cells impair anti-tumour immunity induced by ICIs through multiple pathways
Fig. 2 Role of the gut microbiota in tumor immunity. The gut microbiota and its metabolites are capable of exerting anti/pro-tumour effects through multiple pathways. L. reuteri Lactobacillus reuteri, F. prausnitzii Faecalibacterium prausnitzii, F. nucleatum Fusobacterium nucleatum, HIF-1α Hypoxia-inducible factor-1α, B. pseudolongum Bifidobacterium pseudolongum
Fig. 3 Mode of action of TIM-3, LAG-3, VISTA signaling pathways. (A) TIM-3 binds to Gal-9 and induces Tyr256 and Tyr263 phosphorylation, releasing Bat3, which regulates Fyn and LCK tyrosine kinases, thereby inhibiting TCR signalling. (B) The S484 motif upregulates the surface expression of LAG-3 through PKC signalling; KIEELE is responsible for regulating downstream inhibitory signalling; EP motifs interfere with T cell activation by blocking CD3/ Lck interactions. (C) VISTA binds to PSGL-1 in acidic environments and to VSIG-3 in physiological environments, inhibiting T cell function and proliferation
Fig. 4 An overview of underlying mechanisms of combination therapy. (A) Various TCM ingredients can reprogram TME, regulate PD-L1 expression, modulate metabolism and enrich "beneficial bacteria" that can promote IgA production. (B) Non-coding RNAs can directly or indirectly regulate PD-1/PD-L1 expression. (C) Targeted therapies (such as EGFR TKI) promote tumor cell lysis, MHC expression and Foxp3 degradation. (D) Combined blockade of checkpoint receptors (CR) and their ligands (CR-L). (E) Personalized cancer vaccines are able to upregulate a wide range of immune cells and TCR-β clonotypes
Fig. 5 The role of personalized cancer vaccines and anti-PD therapy in the "Cancer-Immunity Cycle". Personalized Cancer vaccines boost steps 3 and 4 but induce elevated PD-1/PD-L1 in TME. Elevated PD-1/PD-L1 in turn induces potent immunosuppression, impairs step 3 and 6, limiting the efficacy of personalized cancer vaccines. Anti-PD therapy can overcome immunosuppression in steps 3 and 6. Combined application of personalized cancer vaccines and anti-PD therapy can facilitate an efficient cancer "Cancer-Immunity Cycle", promoting tumor regression
Mechanisms, combination therapy, and biomarkers in cancer immunotherapy resistance

June 2024

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139 Reads

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26 Citations

Cell Communication and Signaling

Anti-programmed death 1/programmed death ligand 1 (anti-PD-1/PD-L1) antibodies exert significant antitumor effects by overcoming tumor cell immune evasion and reversing T-cell exhaustion. However, the emergence of drug resistance causes most patients to respond poorly to these immune checkpoint inhibitors (ICIs). Studies have shown that insufficient T-cell infiltration, lack of PD-1 expression, deficient interferon signaling, loss of tumor antigen presentation, and abnormal lipid metabolism are all considered to be closely associated with immunotherapy resistance. To address drug resistance in tumor immunotherapy, a lot of research has concentrated on developing combination therapy strategies. Currently, ICIs such as anti-PD-1 /PD-L1 antibody combined with chemotherapy and targeted therapy have been approved for clinical treatment. In this review, we analyze the mechanisms of resistance to anti-PD-1/PD-L1 therapy in terms of the tumor microenvironment, gut microbiota, epigenetic regulation, and co-inhibitory immune checkpoint receptors. We also discuss various promising combination therapeutic strategies to address resistance to anti-PD-1/PD-L1 drugs, including combining these therapies with traditional Chinese medicine, non-coding RNAs, targeted therapy, other ICIs, and personalized cancer vaccines. Moreover, we focus on biomarkers that predict resistance to anti-PD-1/PD-L1 therapy as well as combination therapy efficacy. Finally, we suggest ways to further expand the application of immunotherapy through personalized combination strategies using biomarker systems.


The flowchart of a typical single cell omic sequencing project. (A), Tissue dissection and preparation of single cell suspensions; (B), Single cell isolation (More details about different isolation methods can be seen in Figure 2); (C), Three single-cell technologies (scDNA-seq, scRNA-seq and sc-ATAC-seq) important gene information extraction. ScDNA-seq: DNA is extracted from individual cells using specific kits or techniques, followed by WGA (whole genome amplification) to obtain all DNA sequence information; ScRNA-seq: RNA is extracted from individual cells using specific kits or techniques, RNA is converted to cDNA using reverse transcriptase, and amplification is performed by PCR to obtain all the information of the transcriptome; and sc-ATAC-seq uses the Tn5 transposase, capture chromatin open region, cut nuclear DNA to obtain nuclear DNA fragments, amplified by PCR, obtain all chromatin open region nuclear genome information.; (D), Single cell sequencing by specific platform; (E), Data analysis.
Comparison of the advantages and disadvantages of five main cell separation techniques.
Application of SCS in CTCs (A) The formation of CTCs and CTCs analysis; (B) Circulating tumor cells as a material for liquid biopsy.
Application of SCS in drug resistance.
Application of SCS in tumor immunotherapy.
Single-cell analysis technologies for cancer research: from tumor-specific single cell discovery to cancer therapy

October 2023

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589 Reads

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15 Citations

Single-cell sequencing (SCS) technology is changing our understanding of cellular components, functions, and interactions across organisms, because of its inherent advantage of avoiding noise resulting from genotypic and phenotypic heterogeneity across numerous samples. By directly and individually measuring multiple molecular characteristics of thousands to millions of single cells, SCS technology can characterize multiple cell types and uncover the mechanisms of gene regulatory networks, the dynamics of transcription, and the functional state of proteomic profiling. In this context, we conducted systematic research on SCS techniques, including the fundamental concepts, procedural steps, and applications of scDNA, scRNA, scATAC, scCITE, and scSNARE methods, focusing on the unique clinical advantages of SCS, particularly in cancer therapy. We have explored challenging but critical areas such as circulating tumor cells (CTCs), lineage tracing, tumor heterogeneity, drug resistance, and tumor immunotherapy. Despite challenges in managing and analyzing the large amounts of data that result from SCS, this technique is expected to reveal new horizons in cancer research. This review aims to emphasize the key role of SCS in cancer research and promote the application of single-cell technologies to cancer therapy.


An overview of sex hormones, gut microbiome and tumorimmunity interactions. A The gut microbiome is a regulator of the response to immune checkpoint inhibitors (PD-L1 or CTLA-4). Meanwhile, sex hormones mediate the innate and adaptive immune response by regulating a variety of immune cells. FMT fecal microbiota transplantation. B Bidirectional regulation of the gut microbiome and sex hormones. Intestinal flora dissociate and activate estrogens by secreting β-glucuronidase. β-estradiol and testosterone regulate the intestinal microenvironment by altering the expression of multiple immune cells and TLRs. TLRs Toll-like receptors
X chromosome silencing and EXIST genes in tumor sex differences. A The genetic composition of the X inactivation centre (XIC) and its location along the X chromosome. LncRNA XIST has positive regulators in red and negative regulators in purple. XIST randomly silences one of the two X chromosomes in females. Xa, the active chromosome; Xi, the inactive chromosome. B On the male X chromosome, proto-oncogene activation or tumor suppressor gene deficiency is a cancer risk. C In females, the Xi mutation is not expressed. Mutations in common genes on Xa affect RNA expression. But when EXITs genes are mutated, the homologous region of Xi compensates for the corresponding effect and RNA function remains normal
Sex-specific epigenetic inheritance contributes to a higher cancer risk in men than in women. The schematic shows epigenetic sex differences in three dimensions: DNA methylation, histone modification and non-coding RNAs. iPSC Induced pluripotent stem cell, PD-L1 Programmed cell death protein ligand, HIF1α Hypoxia-inducible factor-1α, STAT3 Signal transducer and activation of transcription-3, PTEN Phosphatase and tensin homolog deleted on chromosome ten, ER α estrogen receptor α
Sex-differentiated mechanisms in radiotherapy/chemotherapy and targeted therapy. A Pharmacokinetics, immunological response, body composition, particular signaling pathways, and radio sensitivity all differ significantly between male and female. FFM free fat mass. B The mechanisms of sex difference in targeted therapy involve histone acetylation or methylation, EXITs genes in females, and male-specific LOY and EDY. Cancer risk is significantly elevated when cell-intrinsic events reduce p53 function or induce p53 mutations. LOY Loss of the Y chromosome, EDY Extreme downregulation of Y chromosome
Connecting the mechanisms of tumor sex differences with cancer therapy

April 2023

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87 Reads

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18 Citations

Molecular and Cellular Biochemistry

Sex differences in cancer incidence and survival are constant and pronounced globally, across all races and all age groups of cancer types. In 2016, after the National Institutes of Health proposed a policy of utilizing sex as a biological variable, researchers started paying more attention to the molecular mechanisms behind gender variations in cancer. Historically, most previous studies investigating sex differences have been centered on gonadal sex hormones. Nevertheless, sex differences also involve genetic and molecular pathways that run throughout the entire process of cancer cell proliferation, metastasis, and treatment response, in addition to sex hormones. In particular, there is significant gender dimorphism in the efficacy and toxicity of oncology treatments, including conventional radiotherapy and chemotherapy, as well as the emerging targeted therapies and immunotherapy. To be clear, not all mechanisms will exhibit gender bias, and not all gender bias will affect cancer risk. Our goal in this review is to discuss some of the significant sex-related changes in fundamental cancer pathways. To this purpose, we summarize the differential impact of gender on cancer development in three dimensions: sex hormones, genetics, and epigenetics, and focus on current hot subjects including tumor suppressor function, immunology, stem cell renewal, and non-coding RNAs. Clarifying the essential mechanisms of gender differences will help guide the clinical treatment of both sexes in tumor radiation and chemotherapy, medication therapy with various targets, immunotherapy, and even drug development. We anticipate that sex-differentiated research will help advance sex-based cancer personalized medicine models and encourage future basic scientific and clinical research to take sex into account.


Oridonin attenuates LPS-induced early pulmonary fibrosis by regulating impaired autophagy, oxidative stress, inflammation and EMT

April 2022

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17 Reads

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13 Citations

European Journal of Pharmacology

Context Oridonin (Ori) possesses anti-inflammatory, antioxidant and antitumor properties. However, the effects of Ori on Lipopolysaccharide (LPS)-induced early pulmonary fibrosis remain unclear. Objective We evaluated the protective effects of Ori on the mice model of pulmonary fibrosis. Materials and methods The BALB/C mice were given LPS (1 mg/kg) or Ori (20 mg/kg) according to experimental grouping. Then the left lung tissues were used for HE, immunohistochemical and Masson staining, and the right lung tissues were used for hydroxyproline measurement and western blot experiments. Bronchoalveolar lavage fluid was collected for Giemsa staining. Results The high levels of hydroxyproline induced by LPS were reduced by Ori treatment. Immunohistochemical staining and western blot analysis showed that Ori inhibited the increased levels of fibrosis-related proteins (α-smooth muscle actin, transforming growth factor-β, Collagen Ⅰ and phosphorylated-smad). Additionally, Ori treatment increased E-cadherin levels and decreased in Snail and Slug levels. Besides, Ori could suppress LPS-induced the infiltration of neutrophils and activation of the NLRP3 inflammasome. In addition, LPS caused the upregulation of NADPH oxidase 4 and exacerbated lung fibrosis. As the activator of NF-E2 related factor-2, Ori exerted protective effects in this animal model. Moreover, Ori reversed the LPS-triggered increases in Beclin-1, P62/sequestosome 1, autophagy related 3 and LC3. Conclusions These findings suggested that Ori protected against LPS-induced early pulmonary fibrosis by inhibiting NLRP3-dependent inflammation, NADPH oxidase 4-dependent oxidative stress, the impaired autophagy and epithelial mesenchymal transformation.


Amentoflavone Ameliorates Carrageenan-Induced Pleurisy and Lung Injury by Inhibiting the NF-κB/STAT3 Pathways via Nrf2 Activation

February 2022

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36 Reads

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16 Citations

Many natural flavonoids can activate nuclear factor erythroid 2-related factor 2 (Nrf2), which is pivotal for alleviating various diseases related to inflammation and oxidative stress, including pleurisy. Amentoflavone (AMF), a biflavonoid extracted from many plants, has some beneficial bioactivities, especially anti-inflammatory and antioxidative activities. We aimed to investigate whether AMF protects against pleurisy and lung injury induced by carrageenan (Car) by activating Nrf2. Pleurisy was induced in wild-type (WT) and Nrf2-deficient (Nrf2-/-) mice. Then, pleural exudate and lung tissue were collected for biochemical analysis, H&E staining, immunocytochemistry and western blotting. Our results indicated that AMF protected against Car-induced pleurisy and lung injury. The Wright-Giemsa and H&E staining results showed that AMF alleviated inflammatory effusion and pathological injury. In addition, AMF decreased SOD and GSH depletion and MDA and MPO generation in the lung tissue of mice. AMF activated Nrf2 through keap-1 dissociation and subsequently increased heme oxygenase-1 (HO-1), NAD(P)H-quinone oxidoreductase 1 (NQO1), and γ-glutamylcysteine ligase (GCL) levels. Furthermore, AMF suppressed IL-1β and TNF-α levels and increased IL-10 levels in pleural exudate by blocking the proinflammatory NF-κB, signal transducer and activator of transcription 3 (STAT3) and extracellular signal-regulated kinase (ERK) pathways induced by Car. However, these antioxidative and anti-inflammatory effects were weakened in Nrf2-/- mice. Moreover, AMF failed to suppress the NF-κB and STAT3 pathways in Nrf2-/- mice. Our results demonstrated that AMF exerted anti-inflammatory and antioxidative effects in Car-induced lung injury and pleurisy in a Nrf2-dependent manner.

Citations (5)


... [6][7][8][9] However, emerging evidence indicates that inadequate PD-L1 expression and insufficient tumor-infiltrating lymphocytes (TILs) significantly undermine the efficacy of ICB therapy. [10][11][12][13][14] A pressing necessity is needed to reassess the fundamental mechanisms underlying breast cancer immunotherapy and to develop potent immunostimulants capable of augmenting immune activation. ...

Reference:

Self‐Promoting Targeted Delivery of Epigenetic Immunostimulants to Activate Breast Cancer Immunity via HDACs Downregulation and PD‐L1 Upregulation
Mechanisms, combination therapy, and biomarkers in cancer immunotherapy resistance

Cell Communication and Signaling

... By comparing single-cell data across multiple patients, researchers can identify common mutational patterns and chromosomal mutations that may contribute to the development and progression of specific cancer types [30,31]. This knowledge can inform the development of targeted therapies and guide personalized treatment strategies tailored to each patient's unique genetic profile [31][32][33]. ...

Single-cell analysis technologies for cancer research: from tumor-specific single cell discovery to cancer therapy

... and survival rates between males and females (Lopes-Ramos et al., 2020;Rubin et al., 2020). While it is well-established that male and female patients differ genetically due to sex chromosomes and sex hormones, recent studies have revealed that the underlying causal factors extend beyond these apparent distinctions (Dart, 2020;Li et al., 2024;Jackson et al., 2022). Consequently, there is a pressing need for more comprehensive investigations into the risk factors and mechanisms driving sex-specific disparities. ...

Connecting the mechanisms of tumor sex differences with cancer therapy

Molecular and Cellular Biochemistry

... In an LPS-induced pulmonary fibrosis model, impaired autophagy was observed alongside NLRP3 inflammasome activation. Treatment with oridonin significantly inhibited the activation of the NLRP3 inflammasome and reversed autophagy levels (75). In a PM2.5induced pulmonary fibrosis model, PM2.5 was shown to downregulate ALKBH5 expression, promote m6A modifications at specific sites of Atg13 mRNA, and activate ULK complex (composed of ULK1, Atg13, FIP200, and Atg101)-mediated autophagy. ...

Oridonin attenuates LPS-induced early pulmonary fibrosis by regulating impaired autophagy, oxidative stress, inflammation and EMT
  • Citing Article
  • April 2022

European Journal of Pharmacology

... Thus, the ability of GXEA and GXM to reduce DCF fluorescence intensity underscores its role as an antioxidant. Morelloflavone (Gil et al. 1997) and amentoflavone (Hou et al. 2022) present in GXEA and GXM were reported to scavenge ROS and exhibit antioxidant activity. ...

Amentoflavone Ameliorates Carrageenan-Induced Pleurisy and Lung Injury by Inhibiting the NF-κB/STAT3 Pathways via Nrf2 Activation